Rh1CG065400

Belongs to the class-I aminoacyl-tRNA synthetase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0000872
Physical Location & Seq
Forward (+)
13341439 .. 13344064
2626 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG065400.1

Sequence Viewer

Length: 2340 bp
ATGCCGGCCAAGGAGAAAACCCTTGAGCTCATGTTGAAGGTCGGACTGGACGAGCGGACGGCCAAAAACACAATGGCCAACAAGAAGGTCACGTCCAATCTAAGGGCTGTCATTCACGAGGCTGCAGTTACTGATGGATGCAGTCGAAGCATTGGTAATCTTATATACACGGTTGCTACAAAGTTTCCAGCAAATGCCCTTGTGCATCGCCCGGTATTGGCACAGTACATTGTGTCTTCAAAGATTAAAACTCCAGCTCAGTTAGATGCGGCTTTATTATTTTTTGCAAATACGGGGCCAGAAAACTTCAAAACAAGTGAATTTGAAGAAGCATGTGGTGTTGGTGTTGAAGTTTCAGAAGAAGAAATCAAGCAATCTGTTAATGAGGTTTTTGAAGAGAATAAATCTGCAATTTTGGAGCAGCGCTATAAAACAAATGTGGGTGGCTTATTTGCACATCTTAGGAAGAGACATCCGTGGGCTGACCCAAAAATTGTCAAGGCATCCATTGATACAAAGTTGGGTGAATTACTTGGTGAAAGGACTGCCGCAGATGATGAAAAGGTTCCTAAAAACAAGAAAGAGAAACCTGCTAAAGTAGAGGAGAAAGCTACTGCTGAAGAAATTCTTAATCCATATGCGATATTCCCTCAACCAGAGGAAAACTTTAAGGTTCATACTTCAGTTTTCTTTAGTGATGGTTCTATTCTGAGATGTTGCAACTCAAAGGAACTCCTTGAAAAACACTTGAGCTTGACTGGGGGGAGAGTTCTAACTCGCTTTCCTCCTGAACCGAATGGATATCTACATATAGGCCATGCCAAGGCAATGTTTATTGACTTTGGCCTGGCAAAAGAGAGAGGTGGTGACTGCTATCTGAGGTTTGATGACACAAATCCGGAAGCTGAAAAGAAAGAATATATTAATCATATTCAGGAAATTGTCAGTTGGATGGGTTGGGAGCCCTACAAGATCACTTACACTAGTGATTACTTTCACGATCTGTATGAAATAGCAGTGGAGCTCATACGAAGGGGTCACGCTTACGTTGATCATCAGACGGGGGATGAGATAAAGGAGTACAGGGAGAAAAAAATGAACAGCCCTTGGAGGGACAGGCCAATTAAAGAGTCGCTAAAACTTTTTGAGGATATGAGGCGTGGCCTGATTGAAGAAGGGAAAGCAACTCTGAGAATGAAACAAGACATGCAGAATGATAATTTTAACATGTATGACCTTATTGCATATCGTATCAAGTTTACTCCTCATCCACATGCTGGAGACAGTTGGTGTATCTACCCCAGTTACGACTATGCTCATTGCATAGTGGATTCTCTTGAGAATATCACTCATTCGCTGTGCACTTTAGAATTTGAGACGCGGCGTGCTTCATACTACTGGTTATTGCATTCTCTGGGCCTATATCAACCACATGTTTGGGAATATTCAAGACTGAATGTCAGTAACACTGTTATGTCGAAGCGTAAGTTAAATCGACTAGTGACTGAAAATTGGGTTGATGGTTGGGATGATCCACGCCTTATGACACTAGCTGGTTTACGACGTAGGGGTGTGACATCGACTGCCATTAATACGTTTGTTAGAGAAATTGGAATCACCAGAAGTGATTGTAGTATGATCCATCTGAGTCGCCTCGAGTTCCACATCAGAGAAGAGCTCAATAAAACAGCTCCTCGCACAATGGTTGTGCTTGATCCTGTAAAGGTCGTCATTACCAACTGGAAAGATGACCTCATAAAGGACTGTGAAGCAAGAAAGTGGCCCGATTCTGAGGCAGAGTCCTACAAGGTTCCAATTTCCAAGGTGTTGTACATTGAGCGCTCCGATTTTCGCCTTAAAGACTCAAAAGACTACTTCGGACTTGCTCCTGGAAAATCTGCTCTGCTTAGATACGCATGTCCTATCAAGTGTGTGGATGCAAAAGATGTTGTTTTAGCCGAGGATAATGAGACTATCCTTGAGATAAGGGTCGAGTATGATCCGGAGAAGAAGACAAAGCCAAAGGGGGTGCTGCATTGGGTCGCTGAACCTTGTCCGGGGATCGATCCACTGGAAGTGGAAGTCCGATTGTTTGACAGACTATTCAACTCTGAGAATCCTGCTGAGCTTGATGACTGGCTTTCTGATCTGAATGGAAAATCAAAAGTGGTAATACCAAATGCATTCGCTGTTCCCCAACTTGCAAAAGGTGTTGATGTTGGTGACAAGTTTCAGTTCGAAAGACTTGGCTATTTTGTGGTCGACAAAGATTCGACTCCTGAGAAGCTTGTGTTTAATCGTACGGTCACACTGCGAGATAGCTACAAGAATGGGAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00970 ko01100 map00970 map01100
Pfam Domains
Protein Families
tRNA-synt_1c tRNA-synt_1c_C tRNA_synt_1c_R1 tRNA_synt_1c_R2

Protein Analysis

779

Amino Acids

89.34

Weight (kDa)

6.36

Isoelectric Point (pI)

37.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
tRNA_synt_1c_R1 PF04558 6 - 163 2.7e-54 Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1
tRNA-synt_1c PF00749 257 - 561 1e-119 tRNA synthetases class I (E and Q), catalytic domain
tRNA-synt_1c_C PF03950 564 - 667 8.3e-18 tRNA synthetases class I (E and Q), anti-codon binding domain
tRNA-synt_1c_C2 PF20974 677 - 755 1.6e-16 tRNA synthetases class I (E and Q), anti-codon binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 598
AccB7I CCANNNNNTGG 1 cut(s) 1277
AccBSI CCGCTC 1 cut(s) 55
AccI GTMKAC 1 cut(s) 2262
AccII CGCG 1 cut(s) 1381
AccIII TCCGGA 2 cut(s) 898, 2002
AciI CCGC 4 cut(s) 55, 269, 549, 1381
AclWI GGATC 6 cut(s) 1526, 1633, 1709, 1994, 2060, 2069
AcoI YGGCCR 3 cut(s) 6, 60, 75
AcsI RAATTY 3 cut(s) 320, 624, 1370
AcuI CTGAAG 2 cut(s) 639, 666
AfaI GTAC 4 cut(s) 227, 1082, 1832, 2302
AfeI AGCGCT 2 cut(s) 425, 1841
AfiI CCNNNNNNNGG 7 cut(s) 102, 217, 823, 1111, 1277, 1759, 2057
AflIII ACRYGT 2 cut(s) 1227, 1432
AhdI GACNNNNNGTC 1 cut(s) 1457
AhlI ACTAGT 2 cut(s) 983, 1498
AjiI CACGTC 1 cut(s) 93
AjnI CCWGG 2 cut(s) 846, 1888
Alw21I GWGCWC 4 cut(s) 30, 1026, 1364, 1680
Alw26I GTCTC 4 cut(s) 463, 1275, 1370, 1964
Alw44I GTGCAC 1 cut(s) 1360
AlwI GGATC 6 cut(s) 1526, 1633, 1709, 1994, 2060, 2069
AlwNI CAGNNNCTG 1 cut(s) 131
Ama87I CYCGRG 1 cut(s) 1655
Aor13HI TCCGGA 2 cut(s) 898, 2002
Aor51HI AGCGCT 2 cut(s) 425, 1841
ApaLI GTGCAC 1 cut(s) 1360
ApeKI GCWGC 3 cut(s) 122, 421, 2032
ApoI RAATTY 3 cut(s) 320, 624, 1370
AseI ATTAAT 2 cut(s) 924, 1590
Asp700I GAANNNNTTC 2 cut(s) 564, 624
AspLEI GCGC 2 cut(s) 426, 1842
AspS9I GGNCC 3 cut(s) 296, 1417, 1782
AsuC2I CCSGG 2 cut(s) 212, 2058
AsuHPI GGTGA 5 cut(s) 536, 548, 878, 1609, 2234
AsuII TTCGAA 1 cut(s) 2238
AvaI CYCGRG 1 cut(s) 1655
BaeGI GKGCMC 1 cut(s) 1364
BaeI ACNNNNGTAYC 2 cut(s) 1903, 1936
BalI TGGCCA 1 cut(s) 77
BanII GRGCYC 4 cut(s) 30, 966, 1026, 1680
BauI CACGAG 1 cut(s) 116
BbsI GAAGAC 2 cut(s) 228, 2018
Bbv12I GWGCWC 4 cut(s) 30, 1026, 1364, 1680
BbvI GCAGC 3 cut(s) 109, 433, 2019
BccI CCATC 5 cut(s) 128, 692, 946, 1514, 1650
BceAI ACGGC 1 cut(s) 75
BciT130I CCWGG 2 cut(s) 848, 1890
BclI TGATCA 1 cut(s) 1051
BcnI CCSGG 2 cut(s) 212, 2058
BcoDI GTCTC 4 cut(s) 463, 1275, 1370, 1964
BcuI ACTAGT 2 cut(s) 983, 1498
BfaI CTAG 3 cut(s) 984, 1499, 1550
BfmI CTRYAG 1 cut(s) 123
BfoI RGCGCY 2 cut(s) 427, 1843
BfuAI ACCTGC 1 cut(s) 598
BisI GCNGC 6 cut(s) 123, 270, 422, 549, 1382, 2033
BlpI GCTNAGC 1 cut(s) 2124
BlsI GCNGC 6 cut(s) 124, 271, 423, 550, 1383, 2034
Bme1390I CCNGG 4 cut(s) 212, 848, 1890, 2058
BmeRI GACNNNNNGTC 1 cut(s) 1457
BmeT110I CYCGRG 1 cut(s) 1655
BmgBI CACGTC 1 cut(s) 93
BmgT120I GGNCC 3 cut(s) 296, 1417, 1782
BmiI GGNNCC 4 cut(s) 297, 567, 963, 1812
BmrFI CCNGG 4 cut(s) 212, 848, 1890, 2058
BmrI ACTGGG 2 cut(s) 768, 1296
BmsI GCATC 5 cut(s) 128, 214, 256, 512, 1927
BmuI ACTGGG 2 cut(s) 768, 1296
BpiI GAAGAC 2 cut(s) 228, 2018
BplI GAGNNNNNCTC 2 cut(s) 1662, 1694
BpmI CTGGAG 2 cut(s) 237, 1299
Bpu1102I GCTNAGC 1 cut(s) 2124
Bpu14I TTCGAA 1 cut(s) 2238
BpuEI CTTGAG 4 cut(s) 44, 769, 1358, 2000
BpuMI CCSGG 2 cut(s) 212, 2058
Bsa29I ATCGAT 1 cut(s) 2064
BsaJI CCNNGG 7 cut(s) 9, 476, 822, 1106, 1821, 1959, 2057
BsaWI WCCGGW 2 cut(s) 898, 2002
Bsc4I CCNNNNNNNGG 7 cut(s) 102, 217, 823, 1111, 1277, 1759, 2057
Bse118I RCCGGY 1 cut(s) 4
Bse1I ACTGG 7 cut(s) 51, 763, 1302, 1403, 1745, 2076, 2141
Bse3DI GCAATG 2 cut(s) 834, 1318
BseAI TCCGGA 2 cut(s) 898, 2002
BseBI CCWGG 2 cut(s) 848, 1890
BseCI ATCGAT 1 cut(s) 2064
BseDI CCNNGG 7 cut(s) 9, 476, 822, 1106, 1821, 1959, 2057
BseGI GGATG 8 cut(s) 143, 472, 503, 957, 1072, 1267, 1534, 1942
BseLI CCNNNNNNNGG 7 cut(s) 102, 217, 823, 1111, 1277, 1759, 2057
BseMI GCAATG 2 cut(s) 834, 1318
BseMII CTCAG 9 cut(s) 272, 701, 869, 1181, 1637, 1782, 2103, 2115, 2271
BseNI ACTGG 7 cut(s) 51, 763, 1302, 1403, 1745, 2076, 2141
BseRI GAGGAG 3 cut(s) 617, 1254, 1683
BseSI GKGCMC 1 cut(s) 1364
BseXI GCAGC 3 cut(s) 109, 433, 2019
Bsh1236I CGCG 1 cut(s) 1381
BshVI ATCGAT 1 cut(s) 2064
BsiHKAI GWGCWC 4 cut(s) 30, 1026, 1364, 1680
BsiHKCI CYCGRG 1 cut(s) 1655
BsiSI CCGG 5 cut(s) 5, 212, 899, 2003, 2057
BsiWI CGTACG 1 cut(s) 2300
BslFI GGGAC 1 cut(s) 1127
BslI CCNNNNNNNGG 7 cut(s) 102, 217, 823, 1111, 1277, 1759, 2057
BsmAI GTCTC 4 cut(s) 463, 1275, 1370, 1964
BsmBI CGTCTC 1 cut(s) 1370
BsmFI GGGAC 1 cut(s) 1127
BsmI GAATGC 2 cut(s) 1408, 2183
BsoBI CYCGRG 1 cut(s) 1655
Bsp119I TTCGAA 1 cut(s) 2238
Bsp1286I GDGCHC 5 cut(s) 30, 966, 1026, 1364, 1680
Bsp13I TCCGGA 2 cut(s) 898, 2002
Bsp1407I TGTACA 1 cut(s) 1830
Bsp1720I GCTNAGC 1 cut(s) 2124
BspACI CCGC 4 cut(s) 55, 269, 549, 1381
BspCNI CTCAG 9 cut(s) 271, 702, 870, 1182, 1638, 1783, 2104, 2116, 2272
BspDI ATCGAT 1 cut(s) 2064
BspEI TCCGGA 2 cut(s) 898, 2002
BspFNI CGCG 1 cut(s) 1381
BspLI GGNNCC 4 cut(s) 297, 567, 963, 1812
BspMAI CTGCAG 1 cut(s) 127
BspMI ACCTGC 1 cut(s) 598
BspPI GGATC 6 cut(s) 1526, 1633, 1709, 1994, 2060, 2069
BspQI GCTCTTC 1 cut(s) 1668
BspT104I TTCGAA 1 cut(s) 2238
BsrBI CCGCTC 1 cut(s) 55
BsrDI GCAATG 2 cut(s) 834, 1318
BsrFI RCCGGY 1 cut(s) 4
BsrGI TGTACA 1 cut(s) 1830
BsrI ACTGG 7 cut(s) 51, 763, 1302, 1403, 1745, 2076, 2141
BssAI RCCGGY 1 cut(s) 4
BssECI CCNNGG 7 cut(s) 9, 476, 822, 1106, 1821, 1959, 2057
BssSI CACGAG 1 cut(s) 116
BssT1I CCWWGG 4 cut(s) 9, 822, 1106, 1821
Bst2BI CACGAG 1 cut(s) 116
Bst2UI CCWGG 2 cut(s) 848, 1890
Bst4CI ACNGT 6 cut(s) 172, 225, 1286, 1471, 1766, 2305
Bst6I CTCTTC 3 cut(s) 390, 461, 1668
BstAUI TGTACA 1 cut(s) 1830
BstBI TTCGAA 1 cut(s) 2238
BstC8I GCNNGC 2 cut(s) 6, 1386
BstDSI CCRYGG 1 cut(s) 476
BstENI CCTNNNNNAGG 1 cut(s) 1757
BstF5I GGATG 8 cut(s) 143, 472, 503, 957, 1072, 1267, 1534, 1942
BstFNI CGCG 1 cut(s) 1381
BstH2I RGCGCY 2 cut(s) 427, 1843
BstHHI GCGC 2 cut(s) 426, 1842
BstMAI GTCTC 4 cut(s) 463, 1275, 1370, 1964
BstMWI GCNNNNNNNGC 1 cut(s) 147
BstNI CCWGG 2 cut(s) 848, 1890
BstNSI RCATGY 6 cut(s) 336, 1210, 1231, 1277, 1436, 1920
BstSCI CCNGG 4 cut(s) 210, 846, 1888, 2056
BstSFI CTRYAG 1 cut(s) 123
BstSLI GKGCMC 1 cut(s) 1364
BstUI CGCG 1 cut(s) 1381
BstV1I GCAGC 3 cut(s) 109, 433, 2019
BstV2I GAAGAC 2 cut(s) 228, 2018
BstXI CCANNNNNNTGG 1 cut(s) 1437
Bsu15I ATCGAT 1 cut(s) 2064
BsuTUI ATCGAT 1 cut(s) 2064
BtgI CCRYGG 1 cut(s) 476
BtgZI GCGATG 1 cut(s) 191
BtrI CACGTC 1 cut(s) 93
BtsCI GGATG 8 cut(s) 143, 472, 503, 957, 1072, 1267, 1534, 1942
BtsI GCAGTG 2 cut(s) 1023, 2309
BtsIMutI CAGTG 4 cut(s) 1023, 1467, 2069, 2309
BveI ACCTGC 1 cut(s) 598
Cac8I GCNNGC 2 cut(s) 6, 1386
CaiI CAGNNNCTG 1 cut(s) 131
CfoI GCGC 2 cut(s) 426, 1842
Cfr10I RCCGGY 1 cut(s) 4
Cfr13I GGNCC 3 cut(s) 296, 1417, 1782
ClaI ATCGAT 1 cut(s) 2064
CseI GACGC 1 cut(s) 1387
Csp6I GTAC 4 cut(s) 226, 1081, 1831, 2301
CviAII CATG 8 cut(s) 31, 333, 818, 1207, 1228, 1274, 1433, 1917
CviQI GTAC 4 cut(s) 226, 1081, 1831, 2301
DriI GACNNNNNGTC 1 cut(s) 1457
EaeI YGGCCR 3 cut(s) 6, 60, 75
Eam1104I CTCTTC 3 cut(s) 390, 461, 1668
Eam1105I GACNNNNNGTC 1 cut(s) 1457
EarI CTCTTC 3 cut(s) 390, 461, 1668
Ecl136II GAGCTC 3 cut(s) 28, 1024, 1678
Eco130I CCWWGG 4 cut(s) 9, 822, 1106, 1821
Eco24I GRGCYC 4 cut(s) 30, 966, 1026, 1680
Eco32I GATATC 1 cut(s) 803
Eco47III AGCGCT 2 cut(s) 425, 1841
Eco53kI GAGCTC 3 cut(s) 28, 1024, 1678
Eco57I CTGAAG 2 cut(s) 639, 666
Eco88I CYCGRG 1 cut(s) 1655
EcoICRI GAGCTC 3 cut(s) 28, 1024, 1678
EcoNI CCTNNNNNAGG 1 cut(s) 1757
EcoRII CCWGG 2 cut(s) 846, 1888
EcoRV GATATC 1 cut(s) 803
EcoT14I CCWWGG 4 cut(s) 9, 822, 1106, 1821
EcoT22I ATGCAT 1 cut(s) 2185
EcoT38I GRGCYC 4 cut(s) 30, 966, 1026, 1680
ErhI CCWWGG 4 cut(s) 9, 822, 1106, 1821
Esp3I CGTCTC 1 cut(s) 1370
FaeI CATG 8 cut(s) 34, 336, 821, 1210, 1231, 1277, 1436, 1920
FalI AAGNNNNNCTT 2 cut(s) 612, 644
FaqI GGGAC 1 cut(s) 1127
FatI CATG 8 cut(s) 30, 332, 817, 1206, 1227, 1273, 1432, 1916
FauNDI CATATG 1 cut(s) 637
FbaI TGATCA 1 cut(s) 1051
FblI GTMKAC 1 cut(s) 2262
Fnu4HI GCNGC 6 cut(s) 123, 270, 422, 549, 1382, 2033
FokI GGATG 8 cut(s) 150, 459, 490, 964, 1079, 1254, 1541, 1949
FriOI GRGCYC 4 cut(s) 30, 966, 1026, 1680
Fsp4HI GCNGC 6 cut(s) 123, 270, 422, 549, 1382, 2033
FspBI CTAG 3 cut(s) 984, 1499, 1550
GlaI GCGC 2 cut(s) 425, 1841
GluI GCNGC 6 cut(s) 123, 270, 422, 549, 1382, 2033
GsuI CTGGAG 2 cut(s) 237, 1299
HaeII RGCGCY 2 cut(s) 427, 1843
HapII CCGG 5 cut(s) 5, 212, 899, 2003, 2057
HgaI GACGC 1 cut(s) 1387
HhaI GCGC 2 cut(s) 426, 1842
Hin1II CATG 8 cut(s) 34, 336, 821, 1210, 1231, 1277, 1436, 1920
Hin6I GCGC 2 cut(s) 424, 1840
HinP1I GCGC 2 cut(s) 424, 1840
HincII GTYRAC 1 cut(s) 2263
HindII GTYRAC 1 cut(s) 2263
HindIII AAGCTT 1 cut(s) 2285
HpaII CCGG 5 cut(s) 5, 212, 899, 2003, 2057
HphI GGTGA 5 cut(s) 536, 548, 878, 1609, 2234
Hpy166II GTNNAC 4 cut(s) 1260, 1362, 1559, 2263
Hpy188III TCNNGA 9 cut(s) 116, 788, 899, 935, 998, 1337, 1449, 2003, 2279
Hpy8I GTNNAC 4 cut(s) 1260, 1362, 1559, 2263
Hpy99I CGWCG 1 cut(s) 1566
HpyAV CCTTC 4 cut(s) 31, 79, 1026, 1169
HpyCH4III ACNGT 6 cut(s) 172, 225, 1286, 1471, 1766, 2305
HpyCH4IV ACGT 4 cut(s) 92, 1047, 1564, 1595
HpyF10VI GCNNNNNNNGC 1 cut(s) 147
HpySE526I ACGT 4 cut(s) 92, 1047, 1564, 1595
Hsp92II CATG 8 cut(s) 34, 336, 821, 1210, 1231, 1277, 1436, 1920
HspAI GCGC 2 cut(s) 424, 1840
Kpn2I TCCGGA 2 cut(s) 898, 2002
KroI GCCGGC 1 cut(s) 4
KroNI GCCGGC 1 cut(s) 6
Ksp22I TGATCA 1 cut(s) 1051
LguI GCTCTTC 1 cut(s) 1668
LmnI GCTCC 6 cut(s) 418, 961, 1021, 1696, 1847, 1891
Lsp1109I GCAGC 3 cut(s) 109, 433, 2019
LweI GCATC 5 cut(s) 128, 214, 256, 512, 1927
MaeI CTAG 3 cut(s) 984, 1499, 1550
MaeII ACGT 4 cut(s) 92, 1047, 1564, 1595
MbiI CCGCTC 1 cut(s) 55
MhlI GDGCHC 5 cut(s) 30, 966, 1026, 1364, 1680
MlsI TGGCCA 1 cut(s) 77
MluNI TGGCCA 1 cut(s) 77
MlyI GAGTC 5 cut(s) 1139, 1657, 1808, 1856, 2269
MmeI TCCRAC 2 cut(s) 22, 929
Mox20I TGGCCA 1 cut(s) 77
Mph1103I ATGCAT 1 cut(s) 2185
MroI TCCGGA 2 cut(s) 898, 2002
MroNI GCCGGC 1 cut(s) 4
MroXI GAANNNNTTC 2 cut(s) 564, 624
MscI TGGCCA 1 cut(s) 77
MslI CAYNNNNRTG 2 cut(s) 1272, 1472
Msp20I TGGCCA 1 cut(s) 77
MspI CCGG 5 cut(s) 5, 212, 899, 2003, 2057
MspR9I CCNGG 4 cut(s) 212, 848, 1890, 2058
Mva1269I GAATGC 2 cut(s) 1408, 2183
MvaI CCWGG 2 cut(s) 848, 1890
MvnI CGCG 1 cut(s) 1381
MwoI GCNNNNNNNGC 1 cut(s) 147
NaeI GCCGGC 1 cut(s) 6
NciI CCSGG 2 cut(s) 212, 2058
NdeI CATATG 1 cut(s) 637
NgoMIV GCCGGC 1 cut(s) 4
NlaIII CATG 8 cut(s) 34, 336, 821, 1210, 1231, 1277, 1436, 1920
NlaIV GGNNCC 4 cut(s) 297, 567, 963, 1812
NmeAIII GCCGAG 1 cut(s) 1984
NmuCI GTSAC 7 cut(s) 88, 866, 1037, 1501, 1573, 2222, 2305
NsiI ATGCAT 1 cut(s) 2185
NspI RCATGY 6 cut(s) 336, 1210, 1231, 1277, 1436, 1920
NspV TTCGAA 1 cut(s) 2238
PaeR7I CTCGAG 1 cut(s) 1655
PciI ACATGT 2 cut(s) 1227, 1432
PciSI GCTCTTC 1 cut(s) 1668
PcsI WCGNNNNNNNCGW 1 cut(s) 48
PctI GAATGC 2 cut(s) 1408, 2183
PdiI GCCGGC 1 cut(s) 6
PdmI GAANNNNTTC 2 cut(s) 564, 624
PfeI GAWTC 5 cut(s) 1331, 1614, 1787, 2116, 2270
Pfl23II CGTACG 1 cut(s) 2300
PflMI CCANNNNNTGG 1 cut(s) 1277
PfoI TCCNGGA 1 cut(s) 1888
PkrI GCNGC 6 cut(s) 124, 271, 423, 550, 1383, 2034
PleI GAGTC 5 cut(s) 1138, 1656, 1807, 1856, 2269
PpsI GAGTC 5 cut(s) 1138, 1656, 1807, 1856, 2269
PscI ACATGT 2 cut(s) 1227, 1432
PshBI ATTAAT 2 cut(s) 924, 1590
Psp124BI GAGCTC 3 cut(s) 30, 1026, 1680
Psp6I CCWGG 2 cut(s) 846, 1888
PspGI CCWGG 2 cut(s) 846, 1888
PspLI CGTACG 1 cut(s) 2300
PspN4I GGNNCC 4 cut(s) 297, 567, 963, 1812
PspPI GGNCC 3 cut(s) 296, 1417, 1782
PspXI VCTCGAGB 1 cut(s) 1655
PstI CTGCAG 1 cut(s) 127
PstNI CAGNNNCTG 1 cut(s) 131
RsaI GTAC 4 cut(s) 227, 1082, 1832, 2302
RsaNI GTAC 4 cut(s) 226, 1081, 1831, 2301
RseI CAYNNNNRTG 2 cut(s) 1272, 1472
SacI GAGCTC 3 cut(s) 30, 1026, 1680
SalI GTCGAC 1 cut(s) 2261
SapI GCTCTTC 1 cut(s) 1668
SatI GCNGC 6 cut(s) 123, 270, 422, 549, 1382, 2033
Sau96I GGNCC 3 cut(s) 296, 1417, 1782
SchI GAGTC 5 cut(s) 1139, 1657, 1808, 1856, 2269
ScrFI CCNGG 4 cut(s) 212, 848, 1890, 2058
SduI GDGCHC 5 cut(s) 30, 966, 1026, 1364, 1680
SfaNI GCATC 5 cut(s) 128, 214, 256, 512, 1927
SfcI CTRYAG 1 cut(s) 123
Sfr274I CTCGAG 1 cut(s) 1655
SfuI TTCGAA 1 cut(s) 2238
SlaI CTCGAG 1 cut(s) 1655
SmiMI CAYNNNNRTG 2 cut(s) 1272, 1472
SmlI CTYRAG 5 cut(s) 23, 748, 1337, 1655, 1979
SmoI CTYRAG 5 cut(s) 23, 748, 1337, 1655, 1979
SpeI ACTAGT 2 cut(s) 983, 1498
SsiI CCGC 4 cut(s) 55, 269, 549, 1381
SspI AATATT 1 cut(s) 1445
SspMI CTAG 3 cut(s) 984, 1499, 1550
SstI GAGCTC 3 cut(s) 30, 1026, 1680
StyD4I CCNGG 4 cut(s) 210, 846, 1888, 2056
StyI CCWWGG 4 cut(s) 9, 822, 1106, 1821
TaaI ACNGT 6 cut(s) 172, 225, 1286, 1471, 1766, 2305
TaiI ACGT 4 cut(s) 95, 1050, 1567, 1598
TatI WGTACW 3 cut(s) 225, 1080, 1830
TauI GCSGC 3 cut(s) 272, 551, 1384
TfiI GAWTC 5 cut(s) 1331, 1614, 1787, 2116, 2270
TscAI CASTG 4 cut(s) 1023, 1474, 2076, 2316
TseFI GTSAC 7 cut(s) 88, 866, 1037, 1501, 1573, 2222, 2305
TseI GCWGC 3 cut(s) 122, 421, 2032
Tsp45I GTSAC 7 cut(s) 88, 866, 1037, 1501, 1573, 2222, 2305
TspDTI ATGAA 6 cut(s) 573, 665, 1023, 1112, 1211, 1380
TspGWI ACGGA 1 cut(s) 465
TspRI CASTG 4 cut(s) 1023, 1474, 2076, 2316
Van91I CCANNNNNTGG 1 cut(s) 1277
VneI GTGCAC 1 cut(s) 1360
VspI ATTAAT 2 cut(s) 924, 1590
XagI CCTNNNNNAGG 1 cut(s) 1757
XapI RAATTY 3 cut(s) 320, 624, 1370
XceI RCATGY 6 cut(s) 336, 1210, 1231, 1277, 1436, 1920
XcmI CCANNNNNNNNNTGG 1 cut(s) 70
XhoI CTCGAG 1 cut(s) 1655
XmiI GTMKAC 1 cut(s) 2262
XmnI GAANNNNTTC 2 cut(s) 564, 624
XspI CTAG 3 cut(s) 984, 1499, 1550
Zsp2I ATGCAT 1 cut(s) 2185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.