Rh5DG560300

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000668
Physical Location & Seq
Forward (+)
86513660 .. 86521029
7370 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG560300.1

Sequence Viewer

Length: 1788 bp
ATGAAGACTAAAAAGTCAAGTAAGAAGGGCGCAGCACGGGAGCTAGATAGTCCGGCTATTAAAGACAAGGTTGAAATTGGTGTTTTGAGTGGATGGGAAAAGAGATCATCAGAAGTACCACCCTCCGATGGTATTCCTACTCACTCAACAATATCAAAATCCACAAATGTTGTTAACATTGATGATCTCCCTGACTTTCTGTTGGTTGAAATCCTATGTCGGCTTCCTAGCAAGGAATTCGTTTTCCAATGCAAATGTGTTTCCAAGCATTGGCTCAATCTCATCTCAGATCCTTATCTGATTGGCCGCTTTCTACATCTTCAAAGATTTCATAAGCAAACCCCAATAGCACATTCTCTGATAGACAGAAGAGGGGAGGAATTCCCCACTCCTGGAACAACACAGTCGTCATCCAATCTGCTAGCTCCCCTGTTCGAAAGACTCATGGGTTTCCACGGTCTGAAAGAAAAGCCATATGTGGTAGGAACATGTAATGATTTAGTTTTGTGCTGCCAAACTCGACATGACCAAGACCAACTTGATTTCTACATTTGCAATCCATGCACAAGGCAATGGATTGCTCTTCCTCCCACCACTCGACGTCGCACGAATGTACCAGTTGGATTCATCTGTGATCGCTACTATGAGGAGGAAAATAGTACAAGTGGTACCAATAGTACTGTCAGTATTAAAAAGGACTACAGGTGCAAGGTTGTGAGAATTCTTCCCCACGATTTATCTGAAGATAACTATTTCACTCATTTTTCCAAATTCATTGTTGAGGTATTCTCTTTCGAGACTGGTGAATGGAGAGAGTCAATTGTATCGTCCCCACGAAGCATTAGGTTTGGACCTGCTACTAACGTTGCTTGCAATGGAATGTTGTATTGGACATATTCGCAATATGAGCCGGTTGACCAGATCGGGCTTATTGGGTTGGATCCTTTTGTGATCGGCAATAGCAGTGCTAGCCCTAATGGTGATGAGACTGTTGTCGACGATGATCATTACCAATTTCGTCTCTTTGATGCAGTTTATTGTGGTTTTGGTTTCGTCATGCCATGGATATGTATGCGCCGAGGGCGTCTGCAAATGTGGGGCTACAATTACCGGAACGCTGATTTGACGGTTTGGGAGTTAACAGGTGATGATGATCTTGGATCAGCTGACGAGTTCTATTTGAAAAATGTGAGTGTTTTTCCAGTAACCACCTGTGAAGTTTCTGAAAATAATGTTGTTGTTCTAGCCTTGGACCCGAATGATGAGGATATCTTTTATGTAAAAGTGTATGATTGCTCCGTCGCGCCTCTCAATCTCTCCACTCTCATCATCAAGCTTTTGCCGCCAAAGCTTCACTCCAAGGTTGTAAAGAATCAGAAGATGAAGACTAAAAAGTCAAGTAAGAAGCGCGCAGCACTGGAGCTAGTTACTCCGGCTATTAAAGACAAGGTTGAAATTGGTCATGGAGAGACTGCAGATGGAGTCCTTGTTGATCAGGATTTGAACGAACCAACCATGGGAGAAAAACTTGCTAGTTTGAATATAGTACCTGATGATAGAGTGGAGAGCCAAAATAAAGAAGGCTCTTCTCTCCATGCAAAGCCTCCGAGTGCAGACTCTGTTCATATTTTGCTCAAGCAAGCACTACACGCTGATGACCGTGCCCTTCTATTCGAGTGCTTATACACCCAAGATGAGAAGGTCATTGCAAAGTCTGTCTCTCAATTGAATCCAGCTGGTGTTTTGAAGCTCTTACAATCTCTCATATCTCTTATTGAGTCAAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like

Protein Analysis

595

Amino Acids

67.0

Weight (kDa)

5.97

Isoelectric Point (pI)

41.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 60 - 100 2.7e-07 F-box domain
b-prop_At3g26010-like PF24750 157 - 448 7.6e-11 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 13, 1393
AatII GACGTC 1 cut(s) 604
Acc36I ACCTGC 1 cut(s) 862
Acc65I GGTACC 1 cut(s) 668
AccB1I GGYRCC 1 cut(s) 668
AccB7I CCANNNNNTGG 1 cut(s) 270
AccI GTMKAC 1 cut(s) 996
AccII CGCG 2 cut(s) 1304, 1410
AciI CCGC 2 cut(s) 307, 1343
AclI AACGTT 1 cut(s) 864
AclWI GGATC 4 cut(s) 284, 935, 948, 1168
AcoI YGGCCR 1 cut(s) 304
AcsI RAATTY 4 cut(s) 236, 380, 720, 770
AcuI CTGAAG 1 cut(s) 762
AcyI GRCGYC 2 cut(s) 601, 1084
AfaI GTAC 6 cut(s) 117, 615, 661, 670, 679, 1548
AfiI CCNNNNNNNGG 4 cut(s) 128, 270, 392, 1517
AflIII ACRYGT 1 cut(s) 488
AgsI TTSAA 9 cut(s) 74, 209, 323, 1183, 1454, 1504, 1540, 1729, 1747
AjnI CCWGG 1 cut(s) 391
AjuI GAANNNNNNNTTGG 4 cut(s) 337, 369, 871, 903
AluBI AGCT 8 cut(s) 43, 425, 1166, 1336, 1351, 1423, 1736, 1750
AluI AGCT 8 cut(s) 43, 425, 1166, 1336, 1351, 1423, 1736, 1750
Alw26I GTCTC 5 cut(s) 791, 980, 1025, 1463, 1723
AlwI GGATC 4 cut(s) 284, 935, 948, 1168
AlwNI CAGNNNCTG 1 cut(s) 1619
AoxI GGCC 1 cut(s) 304
ApeKI GCWGC 3 cut(s) 32, 510, 1412
ApoI RAATTY 4 cut(s) 236, 380, 720, 770
Asp718I GGTACC 1 cut(s) 668
AspLEI GCGC 5 cut(s) 32, 1077, 1306, 1410, 1412
AspS9I GGNCC 2 cut(s) 851, 1252
AsuHPI GGTGA 3 cut(s) 815, 992, 1157
AsuII TTCGAA 1 cut(s) 435
AsuNHI GCTAGC 2 cut(s) 421, 968
AvaII GGWCC 2 cut(s) 851, 1252
BaeGI GKGCMC 1 cut(s) 1666
BaeI ACNNNNGTAYC 2 cut(s) 597, 630
BamHI GGATCC 1 cut(s) 940
BanI GGYRCC 1 cut(s) 668
BbsI GAAGAC 2 cut(s) 11, 1391
BbvI GCAGC 3 cut(s) 44, 497, 1424
BccI CCATC 3 cut(s) 87, 122, 1472
BcgI CGANNNNNNTGC 2 cut(s) 220, 254
BciT130I CCWGG 1 cut(s) 393
BclI TGATCA 2 cut(s) 1003, 1492
BcoDI GTCTC 5 cut(s) 791, 980, 1025, 1463, 1723
BfaI CTAG 7 cut(s) 44, 228, 422, 969, 1244, 1424, 1533
BfmI CTRYAG 2 cut(s) 700, 1473
BfuAI ACCTGC 1 cut(s) 862
BisI GCNGC 5 cut(s) 33, 307, 511, 1343, 1413
BlsI GCNGC 5 cut(s) 34, 308, 512, 1344, 1414
BmcAI AGTACT 1 cut(s) 679
Bme1390I CCNGG 1 cut(s) 393
Bme18I GGWCC 2 cut(s) 851, 1252
BmgT120I GGNCC 2 cut(s) 851, 1252
BmiI GGNNCC 3 cut(s) 670, 942, 1254
BmrFI CCNGG 1 cut(s) 393
BmsI GCATC 1 cut(s) 1018
BmtI GCTAGC 2 cut(s) 425, 972
BoxI GACNNNNGTC 1 cut(s) 992
BpiI GAAGAC 2 cut(s) 11, 1391
BplI GAGNNNNNCTC 2 cut(s) 773, 805
BpmI CTGGAG 1 cut(s) 1439
Bpu14I TTCGAA 1 cut(s) 435
BpuEI CTTGAG 1 cut(s) 1619
BsaBI GATNNNNATC 2 cut(s) 294, 1152
BsaHI GRCGYC 2 cut(s) 601, 1084
BsaJI CCNNGG 6 cut(s) 454, 1061, 1078, 1248, 1359, 1515
BsaWI WCCGGW 1 cut(s) 1110
BsaXI ACNNNNNCTCC 2 cut(s) 1473, 1503
Bsc4I CCNNNNNNNGG 4 cut(s) 128, 270, 392, 1517
Bse118I RCCGGY 1 cut(s) 910
Bse1I ACTGG 4 cut(s) 617, 805, 1202, 1422
Bse3DI GCAATG 3 cut(s) 578, 880, 1704
Bse8I GATNNNNATC 2 cut(s) 294, 1152
BseBI CCWGG 1 cut(s) 393
BseDI CCNNGG 6 cut(s) 454, 1061, 1078, 1248, 1359, 1515
BseGI GGATG 2 cut(s) 98, 410
BseJI GATNNNNATC 2 cut(s) 294, 1152
BseLI CCNNNNNNNGG 4 cut(s) 128, 270, 392, 1517
BseMI GCAATG 3 cut(s) 578, 880, 1704
BseMII CTCAG 1 cut(s) 300
BseNI ACTGG 4 cut(s) 617, 805, 1202, 1422
BsePI GCGCGC 1 cut(s) 1408
BseRI GAGGAG 1 cut(s) 662
BseSI GKGCMC 1 cut(s) 1666
BseXI GCAGC 3 cut(s) 44, 497, 1424
BsgI GTGCAG 1 cut(s) 1632
Bsh1236I CGCG 2 cut(s) 1304, 1410
BshFI GGCC 1 cut(s) 306
BshNI GGYRCC 1 cut(s) 668
BsiSI CCGG 4 cut(s) 53, 911, 1111, 1433
BslFI GGGAC 1 cut(s) 814
BslI CCNNNNNNNGG 4 cut(s) 128, 270, 392, 1517
BsmAI GTCTC 5 cut(s) 791, 980, 1025, 1463, 1723
BsmBI CGTCTC 1 cut(s) 1025
BsmFI GGGAC 1 cut(s) 814
BsnI GGCC 1 cut(s) 306
Bsp119I TTCGAA 1 cut(s) 435
Bsp1286I GDGCHC 1 cut(s) 1666
Bsp19I CCATGG 2 cut(s) 1061, 1515
BspACI CCGC 2 cut(s) 307, 1343
BspANI GGCC 1 cut(s) 306
BspCNI CTCAG 1 cut(s) 299
BspFNI CGCG 2 cut(s) 1304, 1410
BspLI GGNNCC 3 cut(s) 670, 942, 1254
BspMAI CTGCAG 1 cut(s) 1477
BspMI ACCTGC 1 cut(s) 862
BspOI GCTAGC 2 cut(s) 425, 972
BspPI GGATC 4 cut(s) 284, 935, 948, 1168
BspQI GCTCTTC 2 cut(s) 588, 1591
BspT104I TTCGAA 1 cut(s) 435
BspT107I GGYRCC 1 cut(s) 668
BsrDI GCAATG 3 cut(s) 578, 880, 1704
BsrFI RCCGGY 1 cut(s) 910
BsrI ACTGG 4 cut(s) 617, 805, 1202, 1422
BssAI RCCGGY 1 cut(s) 910
BssECI CCNNGG 6 cut(s) 454, 1061, 1078, 1248, 1359, 1515
BssHII GCGCGC 1 cut(s) 1408
BssNI GRCGYC 2 cut(s) 601, 1084
BssT1I CCWWGG 4 cut(s) 1061, 1248, 1359, 1515
Bst2UI CCWGG 1 cut(s) 393
Bst4CI ACNGT 6 cut(s) 405, 458, 682, 991, 1129, 1661
Bst6I CTCTTC 3 cut(s) 364, 588, 1591
BstACI GRCGYC 2 cut(s) 601, 1084
BstAPI GCANNNNNTGC 1 cut(s) 561
BstBI TTCGAA 1 cut(s) 435
BstC8I GCNNGC 5 cut(s) 423, 871, 970, 1410, 1641
BstDEI CTNAG 1 cut(s) 286
BstDSI CCRYGG 3 cut(s) 454, 1061, 1515
BstF5I GGATG 2 cut(s) 98, 410
BstFNI CGCG 2 cut(s) 1304, 1410
BstHHI GCGC 5 cut(s) 32, 1077, 1306, 1410, 1412
BstMAI GTCTC 5 cut(s) 791, 980, 1025, 1463, 1723
BstMWI GCNNNNNNNGC 7 cut(s) 561, 907, 969, 1081, 1342, 1348, 1649
BstNI CCWGG 1 cut(s) 393
BstNSI RCATGY 1 cut(s) 492
BstPAI GACNNNNGTC 1 cut(s) 992
BstSCI CCNGG 1 cut(s) 391
BstSFI CTRYAG 2 cut(s) 700, 1473
BstSLI GKGCMC 1 cut(s) 1666
BstUI CGCG 2 cut(s) 1304, 1410
BstV1I GCAGC 3 cut(s) 44, 497, 1424
BstV2I GAAGAC 2 cut(s) 11, 1391
BstX2I RGATCY 2 cut(s) 289, 940
BstYI RGATCY 2 cut(s) 289, 940
BsuRI GGCC 1 cut(s) 306
BtgI CCRYGG 3 cut(s) 454, 1061, 1515
BtsCI GGATG 2 cut(s) 98, 410
BtsI GCAGTG 1 cut(s) 970
BtsIMutI CAGTG 2 cut(s) 970, 1415
BveI ACCTGC 1 cut(s) 862
Cac8I GCNNGC 5 cut(s) 423, 871, 970, 1410, 1641
CaiI CAGNNNCTG 1 cut(s) 1619
CfoI GCGC 5 cut(s) 32, 1077, 1306, 1410, 1412
Cfr10I RCCGGY 1 cut(s) 910
Cfr13I GGNCC 2 cut(s) 851, 1252
CseI GACGC 1 cut(s) 1073
Csp6I GTAC 6 cut(s) 116, 614, 660, 669, 678, 1547
CspCI CAANNNNNGTGG 2 cut(s) 151, 186
CviAII CATG 9 cut(s) 445, 489, 524, 561, 1057, 1062, 1463, 1516, 1595
CviQI GTAC 6 cut(s) 116, 614, 660, 669, 678, 1547
DdeI CTNAG 1 cut(s) 286
DrdI GACNNNNNNGTC 2 cut(s) 13, 1393
DseDI GACNNNNNNGTC 2 cut(s) 13, 1393
EaeI YGGCCR 1 cut(s) 304
Eam1104I CTCTTC 3 cut(s) 364, 588, 1591
EarI CTCTTC 3 cut(s) 364, 588, 1591
Eco130I CCWWGG 4 cut(s) 1061, 1248, 1359, 1515
Eco32I GATATC 1 cut(s) 1270
Eco47I GGWCC 2 cut(s) 851, 1252
Eco57I CTGAAG 1 cut(s) 762
EcoRI GAATTC 3 cut(s) 236, 380, 720
EcoRII CCWGG 1 cut(s) 391
EcoRV GATATC 1 cut(s) 1270
EcoT14I CCWWGG 4 cut(s) 1061, 1248, 1359, 1515
ErhI CCWWGG 4 cut(s) 1061, 1248, 1359, 1515
Esp3I CGTCTC 1 cut(s) 1025
FaeI CATG 9 cut(s) 448, 492, 527, 564, 1060, 1065, 1466, 1519, 1598
FalI AAGNNNNNCTT 2 cut(s) 522, 554
FaqI GGGAC 1 cut(s) 814
FatI CATG 9 cut(s) 444, 488, 523, 560, 1056, 1061, 1462, 1515, 1594
FauNDI CATATG 1 cut(s) 475
FbaI TGATCA 2 cut(s) 1003, 1492
FblI GTMKAC 1 cut(s) 996
Fnu4HI GCNGC 5 cut(s) 33, 307, 511, 1343, 1413
FokI GGATG 2 cut(s) 105, 397
Fsp4HI GCNGC 5 cut(s) 33, 307, 511, 1343, 1413
FspBI CTAG 7 cut(s) 44, 228, 422, 969, 1244, 1424, 1533
GlaI GCGC 5 cut(s) 31, 1076, 1305, 1409, 1411
GluI GCNGC 5 cut(s) 33, 307, 511, 1343, 1413
GsuI CTGGAG 1 cut(s) 1439
HaeIII GGCC 1 cut(s) 306
HapII CCGG 4 cut(s) 53, 911, 1111, 1433
HgaI GACGC 1 cut(s) 1073
HhaI GCGC 5 cut(s) 32, 1077, 1306, 1410, 1412
Hin1I GRCGYC 2 cut(s) 601, 1084
Hin1II CATG 9 cut(s) 448, 492, 527, 564, 1060, 1065, 1466, 1519, 1598
Hin6I GCGC 5 cut(s) 30, 1075, 1304, 1408, 1410
HinP1I GCGC 5 cut(s) 30, 1075, 1304, 1408, 1410
HincII GTYRAC 4 cut(s) 175, 916, 997, 1140
HindII GTYRAC 4 cut(s) 175, 916, 997, 1140
HindIII AAGCTT 2 cut(s) 1334, 1349
HinfI GANTC 8 cut(s) 441, 624, 815, 1372, 1482, 1616, 1729, 1778
HpaI GTTAAC 2 cut(s) 175, 1140
HpaII CCGG 4 cut(s) 53, 911, 1111, 1433
HphI GGTGA 3 cut(s) 815, 992, 1157
Hpy166II GTNNAC 4 cut(s) 175, 916, 997, 1140
Hpy188III TCNNGA 2 cut(s) 796, 1496
Hpy8I GTNNAC 4 cut(s) 175, 916, 997, 1140
Hpy99I CGWCG 4 cut(s) 603, 606, 1001, 1304
HpyAV CCTTC 4 cut(s) 19, 1574, 1676, 1693
HpyCH4III ACNGT 6 cut(s) 405, 458, 682, 991, 1129, 1661
HpyCH4IV ACGT 2 cut(s) 601, 864
HpyF10VI GCNNNNNNNGC 7 cut(s) 561, 907, 969, 1081, 1342, 1348, 1649
HpyF3I CTNAG 1 cut(s) 286
HpySE526I ACGT 2 cut(s) 601, 864
Hsp92I GRCGYC 2 cut(s) 601, 1084
Hsp92II CATG 9 cut(s) 448, 492, 527, 564, 1060, 1065, 1466, 1519, 1598
HspAI GCGC 5 cut(s) 30, 1075, 1304, 1408, 1410
KpnI GGTACC 1 cut(s) 672
Ksp22I TGATCA 2 cut(s) 1003, 1492
KspAI GTTAAC 2 cut(s) 175, 1140
LguI GCTCTTC 2 cut(s) 588, 1591
LmnI GCTCC 4 cut(s) 40, 430, 1301, 1420
Lsp1109I GCAGC 3 cut(s) 44, 497, 1424
LweI GCATC 1 cut(s) 1018
MaeI CTAG 7 cut(s) 44, 228, 422, 969, 1244, 1424, 1533
MaeII ACGT 2 cut(s) 601, 864
MaeIII GTNAC 2 cut(s) 1204, 1426
MboII GAAGA 9 cut(s) 16, 311, 381, 575, 716, 755, 1390, 1396, 1578
MfeI CAATTG 2 cut(s) 819, 1724
MflI RGATCY 2 cut(s) 289, 940
MhlI GDGCHC 1 cut(s) 1666
MlyI GAGTC 5 cut(s) 435, 824, 1491, 1610, 1787
MmeI TCCRAC 2 cut(s) 601, 918
MseI TTAA 5 cut(s) 60, 174, 690, 1139, 1440
MslI CAYNNNNRTG 2 cut(s) 1066, 1653
MspA1I CMGCKG 2 cut(s) 1166, 1736
MspI CCGG 4 cut(s) 53, 911, 1111, 1433
MspR9I CCNGG 1 cut(s) 393
MunI CAATTG 2 cut(s) 819, 1724
MvaI CCWGG 1 cut(s) 393
MvnI CGCG 2 cut(s) 1304, 1410
MwoI GCNNNNNNNGC 7 cut(s) 561, 907, 969, 1081, 1342, 1348, 1649
NcoI CCATGG 2 cut(s) 1061, 1515
NdeI CATATG 1 cut(s) 475
NheI GCTAGC 2 cut(s) 421, 968
NlaIII CATG 9 cut(s) 448, 492, 527, 564, 1060, 1065, 1466, 1519, 1598
NlaIV GGNNCC 3 cut(s) 670, 942, 1254
NmeAIII GCCGAG 1 cut(s) 1103
NspI RCATGY 1 cut(s) 492
NspV TTCGAA 1 cut(s) 435
PauI GCGCGC 1 cut(s) 1408
PciI ACATGT 1 cut(s) 488
PciSI GCTCTTC 2 cut(s) 588, 1591
PfeI GAWTC 3 cut(s) 624, 1372, 1729
PflMI CCANNNNNTGG 1 cut(s) 270
PfoI TCCNGGA 1 cut(s) 391
PkrI GCNGC 5 cut(s) 34, 308, 512, 1344, 1414
PleI GAGTC 5 cut(s) 435, 823, 1490, 1610, 1786
PpsI GAGTC 5 cut(s) 435, 823, 1490, 1610, 1786
PscI ACATGT 1 cut(s) 488
PshAI GACNNNNGTC 1 cut(s) 992
Psp1406I AACGTT 1 cut(s) 864
Psp6I CCWGG 1 cut(s) 391
PspGI CCWGG 1 cut(s) 391
PspN4I GGNNCC 3 cut(s) 670, 942, 1254
PspPI GGNCC 2 cut(s) 851, 1252
PstI CTGCAG 1 cut(s) 1477
PstNI CAGNNNCTG 1 cut(s) 1619
PsuI RGATCY 2 cut(s) 289, 940
PteI GCGCGC 1 cut(s) 1408
PvuII CAGCTG 2 cut(s) 1166, 1736
RsaI GTAC 6 cut(s) 117, 615, 661, 670, 679, 1548
RsaNI GTAC 6 cut(s) 116, 614, 660, 669, 678, 1547
RseI CAYNNNNRTG 2 cut(s) 1066, 1653
SalI GTCGAC 1 cut(s) 995
SapI GCTCTTC 2 cut(s) 588, 1591
SaqAI TTAA 5 cut(s) 60, 174, 690, 1139, 1440
SatI GCNGC 5 cut(s) 33, 307, 511, 1343, 1413
Sau96I GGNCC 2 cut(s) 851, 1252
ScaI AGTACT 1 cut(s) 679
SchI GAGTC 5 cut(s) 435, 824, 1491, 1610, 1787
ScrFI CCNGG 1 cut(s) 393
SduI GDGCHC 1 cut(s) 1666
SfaNI GCATC 1 cut(s) 1018
SfcI CTRYAG 2 cut(s) 700, 1473
SfuI TTCGAA 1 cut(s) 435
SinI GGWCC 2 cut(s) 851, 1252
SmiMI CAYNNNNRTG 2 cut(s) 1066, 1653
SmlI CTYRAG 1 cut(s) 1634
SmoI CTYRAG 1 cut(s) 1634
SsiI CCGC 2 cut(s) 307, 1343
SspMI CTAG 7 cut(s) 44, 228, 422, 969, 1244, 1424, 1533
StyD4I CCNGG 1 cut(s) 391
StyI CCWWGG 4 cut(s) 1061, 1248, 1359, 1515
TaaI ACNGT 6 cut(s) 405, 458, 682, 991, 1129, 1661
TaiI ACGT 2 cut(s) 604, 867
TaqI TCGA 6 cut(s) 435, 520, 598, 795, 996, 1674
TatI WGTACW 2 cut(s) 659, 677
TauI GCSGC 2 cut(s) 309, 1345
TfiI GAWTC 3 cut(s) 624, 1372, 1729
Tru1I TTAA 5 cut(s) 60, 174, 690, 1139, 1440
Tru9I TTAA 5 cut(s) 60, 174, 690, 1139, 1440
TscAI CASTG 2 cut(s) 970, 1422
TseI GCWGC 3 cut(s) 32, 510, 1412
TspDTI ATGAA 6 cut(s) 17, 320, 616, 763, 1397, 1613
TspGWI ACGGA 1 cut(s) 1288
TspRI CASTG 2 cut(s) 970, 1422
Van91I CCANNNNNTGG 1 cut(s) 270
VpaK11BI GGWCC 2 cut(s) 851, 1252
XapI RAATTY 4 cut(s) 236, 380, 720, 770
XceI RCATGY 1 cut(s) 492
XmiI GTMKAC 1 cut(s) 996
XspI CTAG 7 cut(s) 44, 228, 422, 969, 1244, 1424, 1533
ZraI GACGTC 1 cut(s) 602
ZrmI AGTACT 1 cut(s) 679
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.