Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000907

Physical Location & Seq

Genomic Coordinates Reverse (-)

2060444 .. 2067483

Gene Structure 7040 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G06720.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3444 bp

ATGGCCGCCGACGAACTGATGCCGTCTCACAGGTCACACAGGACTCCCAAATCAGGTCCTACCGCGAGGAAGAAATCTGAACTAGATAAGAAGAAGCGTGGAATCTCCGTTGACAAGCAGAAAAACCTTAAGGCGTTTGGTGTTAAATCGGTTGTTCATGCGAAGAAAGCAAAACATCACGCTGCGGAGAAGGAGCAAAAGCGGCTTCATCTTCCGAAAATTGATCGTAATTATGGCGAAGCTCCTCCTTTCGTCGTCGTGGTTCAAGGCCCCCCAGGAGTTGGAAAGTCTCTCGTGATTAAATCTCTTGTGAAGGAATTTACAAAACAGAATGTACCCGAGGTTCGAGGACCTATTACCATTGTACAAGGTAAACAGAGAAGGTTTCAATTTGTGGAGTGCCCGAATGATATCAATGCGATGGTGGATTGTGCAAAGGTTGCTGATCTAGCCCTACTTGTTGTAGACGGGAGTTATGGTTTTGAGATGGAAACCTTTGAATTCCTCAATATTATGCAAGTGCATGGATTTCCTAGAGTTATGGGTGTTCTCACTCACCTTGATAAGTTCAATGATGTTAAGAAGCTGAGAAAAACAAAACATCATCTCAAGCATCGGTTTTGGACTGAAATATATCATGGAGCTAAATTGTTTTATTTATCTGGTCTCATTCATGGGAAGTATACGCCGCGTGAAGTTCACAACCTCGCCCGCTTTGTAATTGTTATCAAGCCTCAGCCATTGACATGGCGAACAGCACATCCTTATGTGTTGGTTGATCGCCTTGAAGATGTTACCCCTCCGGAGAAAGTTCAGATGGATAAGAAATGCGATAGAAATATCACTGTGTTTGGTTACCTACGTGGTTGTAACTTCAAAAAAAGGATGAAGGTTCATATTGCTGGAGTTGGTGACTTCATTGTAGCTGGGGTGACTGCTTTAACTGATCCTTGTCCTTTACCTTCAGCTGGCAAGAAAAAAGGGCTGAGGGACAGGGATAAGCTTTTCTATGCTCCTATGTCCGGGATTGGAGATCTTGTGTATGACAAAGATGCTGTTTACATCAACATAAATAGTCACCAAGTTCAGTACTCTAAAACTGACGATGGAAAGGGAGAACCTACTAATAAAGGAAAGGGCAGAGATGTTGGTGAAGATTTGGTAAAGTCGTTGCAGAACACAAAGTATTCTGTTGATGAGAAACTAGATAAGACATTCATTAACTTTTTTGGCAAAAAGACTAGTGCCAGTTCAGAAACAAAACTTAAGGCTGAAGATGCGTATCACTCTTTGCCGGAAGGTTCTGACAGTGAGTCTCAATCTGGCGATGATGAGGAGGATATAGTAGGTAATGAAAGTGAAATGAAGCAGGAAACTGAGATTCATGGTGGAAGGTTGAGGAGGAAAGCTATCTTCAAGACGGACTTGAATGAAGATGATTTTGAGGAAGCAGACGATCTTGAATTGGATTCATATGACCCAGATACATATGATTTTGAGGAAGCAGACGATGCTGAATCAGACGATAATGAAGTTGAAGATGGTGGAGATGACTCTGCTTCCGATTCAGCCGATGGTGAACCAGGGGATTATCAGATAGATGATAAGGACTCTGGTAACATATCACAATGGAAAGCACCCTTGAAGGAGATAGCCAGAAAGAAGAACCCCAACTTGATGCAAATTGTGTATGGAGCATCATCATTAGCTACTCCCTTGATAAATGAGAACCATGACATTAGTGATGATGACGAAAGTGATGATGAAGACTTCTTTAAGCCAAAAGGAGAACAACACAAGAATTTAGGTGGTGGATTGGATGTGGGATATGTCAACTCAGAGGATTGTTCTAAATTTGTGAATTATGGATACCTAAAGAATTGGAAAGAGAAAGAAGTATGTGAGAGCATTCGTGATCGATTTACCACTGGTGATTGGTCAAAAGCTGCTCTGAGAGACAAAAATTTAGGTACTGGCGGTGAGGGAGAAGATGATGAACTTTATGGTGATTTTGAGGATCTAGAGACGGGAGAGAAGCACAAAAGCCATGAGAACTTGGAATCGGGTGCAAATGAAAATGAAGATGAAGATGCAGAAGTCGTTGAGCGTGATGGGAACAATCCTCGTAGTCAAGCCGATGAACCAGGATACGCTGATAAATTGAAGGAAGCGCAGGAAATTACAAAACAGAGGAATGAGTTAGAATACAATGATCTTGACGAGGAAACTCGAATTGAGTTAGCAGGATTCCGGACTGGAACATACTTGAGGCTGGAGATTCACAATGTTCCTTATGAGATGGTTGAATTCTTTGATCCTTGTCATCCAATTCTAGTTGGAGGTATTGGTTTCGGCGAGGACAATGTTGGATATATGCAGGCCCGGTTGAAGAAACATAGGTGGCATAAGAAAGTACTAAAGACAAGAGATCCTATTATTGTGTCTATTGGATGGAGACGCTATCAGACTATTCCTGTATTTGCCATTGAAGATCGCAATGGCAGGCATCGAATGCTCAAGTATACTCCAGAACACATGCACTGCCTTGCTTCGTTCTGGGGTCCTCTTGTCCCACCCAACACTGGCTTTGTCGCTTTCCAGAACCTGTCAAACAATCAGGCAGGATTTAGGATAACAGCGACTTCTGTAGTTCTGGAGTTTAATCACCAGGCCCGTATTGTAAAGAAAATCAAGCTGGTTGGGACTCCGTGCAAGATCAAGAAAAAGACTGCATTTATCAAAGACATGTTCACTTCTGACCTTGAAATAGCTCGATTTGAAGGTTCATCTGTTCGGACAGTTAGTGGCATTAGAGGACAAGTAAAAAAGGCTGGAAAAAACATGCTTGATAACAAGGCTGAAGAAGGGATTGCGAGGTGTACCTTTGAAGATCAAATCCATATGAGCGACATGGTATTCTTAAGGGCTTGGACTACAGTGGAAGTTCCACAATTTTACAATCCTCTAACGACAGCCTTGCAACCCCGCGATAAGACCTGGAATGGGATGAAAACTTTTGGCGAACTCCGTAGAGAGCTGAATATTCCTATTCCAGTGAATAAGGATTCACTCTACAAGGCAATCGAAAGAAAGCAAAAGAAGTTCAATCCACTACAGATTCCAAAGCGTCTAGAAAAAGATTTACCGTTTATGTCGAAACCCAAAAATATACCAAAGCGGAAAAGACCATCACTAGAGGATAAAAGAGCAGTTATAATGGAACCGAAAGAAAGAAAAGAGCATACTATCATCCAGCAATTCCAGCTGCTTCAACATCACACGATGAAGAAGAAAAAGGCAACGGATCAGAAGAAGAGGAAAGAGTATGAAGCAGAGAAAGCTAAGAATGAGGAAATAAATAAGAAACGTAGGAGAGAAGAGAGACGGGACAGATATCGTGAGGAAGATAAACAGAAAAAGAAGACGAGAAGAAGCCTTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000462 GO:0000469 GO:0000478 GO:0000479 GO:0001882 GO:0001883 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0003924 GO:0005488 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0030686 GO:0031974 GO:0031981 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0032991 GO:0034470 GO:0034511 GO:0034641 GO:0034660 GO:0035639 GO:0036094 GO:0042254 GO:0042274 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0097367 GO:1901265 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

AARP2CN RIBIOP_C

Protein Analysis

1147

Amino Acids

131.18

Weight (kDa)

7.81

Isoelectric Point (pI)

38.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AARP2CN	PF08142	244 - 317	2.2e-26	AARP2CN (NUC121) domain
RIBIOP_C	PF04950	728 - 1009	4.4e-87	40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0000907)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06720 AT1G06720 AT1G06720
fragaria_vesca	FvH4_4g10660
malus_domestica	MD00G1071300.v1.1 MD00G1152200.v1.1 MD03G1154000.v1.1
prunus_persica	Prupe.1G548200_v2.0.a1 Prupe.8G069100_v2.0.a1 Prupe.8G069100_v2.0.a1
pyrus_communis	pycom03g10780 pycom03g10790 pycom07g03680 pycom11g14630 pycom11g14640
rosa_chinensis	RchiOBHm_Chr2g0114561 RchiOBHm_Chr2g0114571 RchiOBHm_Chr4g0406311 RchiOBHm_Chr5g0051051
rosa_laevigata	RLG00000008777 RLG00000018114 RLG00000034749
rosa_multiflora	Rmu_co8051646.1_g000001 Rmu_sc0000370.1_g000003 Rmu_sc0000371.1_g000013 Rmu_sc0000446.1_g000025 Rmu_sc0000898.1_g000055 Rmu_sc0001520.1_g000010 Rmu_sc0003452.1_g000005 Rmu_sc0030223.1_g000001
rosa_roxburghii	Rroxscaffold_1G00029430 Rroxscaffold_2G00130290 Rroxscaffold_3G00239130 Rroxscaffold_3G00239160
rosa_rugosa	Rorug04G0068100 Rorug04G0068200 Rorug04G0068300 Rorug05G0265700 Rorug07G0181200 Rorug07G0181300 Rorug07G0181400 Rorug07G0181500 Rorug07G0181500 Rorug07G0181600 Rorug07G0181800
rosa_samantha	Rh2AG248700 Rh2BG258300 Rh2BG258500 Rh2CG252100 Rh2CG252200 Rh2CG252500 Rh2DG256800 Rh4AG137200 Rh4BG134800 Rh4CG145400 Rh4DG131800 Rh5AG337900 Rh5BG347600 Rh5CG375000 Rh5DG360700
rosa_wichuraiana	Rw0G006840 Rw0G023620 Rw2G019340 Rw4G011120 Rw5G031930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	3215
AccB7I	CCANNNNNTGG	1 cut(s)	281
AccI	GTMKAC	3 cut(s)	465, 683, 2522
AccII	CGCG	3 cut(s)	65, 691, 2988
AccIII	TCCGGA	2 cut(s)	802, 2250
AciI	CCGC	9 cut(s)	6, 63, 185, 202, 689, 712, 1977, 2986, 3178
AclWI	GGATC	5 cut(s)	941, 2025, 2309, 2423, 3312
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	6 cut(s)	317, 500, 1801, 1853, 1963, 2306
AcuI	CTGAAG	3 cut(s)	948, 1293, 2880
AfaI	GTAC	6 cut(s)	336, 366, 1091, 1972, 2415, 2881
AfiI	CCNNNNNNNGG	6 cut(s)	53, 281, 968, 1022, 2582, 3003
AflII	CTTAAG	3 cut(s)	128, 1265, 2920
AflIII	ACRYGT	1 cut(s)	2745
AhdI	GACNNNNNGTC	1 cut(s)	1312
AhlI	ACTAGT	1 cut(s)	1241
AjnI	CCWGG	5 cut(s)	274, 1582, 2143, 2667, 2996
AloI	GAACNNNNNNTCC	2 cut(s)	745, 777
Alw26I	GTCTC	8 cut(s)	30, 294, 671, 1320, 1950, 2018, 2449, 3376
AlwI	GGATC	5 cut(s)	941, 2025, 2309, 2423, 3312
AlwNI	CAGNNNCTG	1 cut(s)	2605
Ama87I	CYCGRG	1 cut(s)	338
Aor13HI	TCCGGA	2 cut(s)	802, 2250
AoxI	GGCC	4 cut(s)	3, 268, 2379, 2670
ApeKI	GCWGC	3 cut(s)	182, 1946, 3265
ApoI	RAATTY	6 cut(s)	317, 500, 1801, 1853, 1963, 2306
AspLEI	GCGC	1 cut(s)	2173
AspS9I	GGNCC	6 cut(s)	56, 269, 350, 2380, 2561, 2671
AsuC2I	CCSGG	2 cut(s)	1024, 2383
AvaI	CYCGRG	1 cut(s)	338
AvaII	GGWCC	3 cut(s)	56, 350, 2561
BaeGI	GKGCMC	1 cut(s)	404
BauI	CACGAG	1 cut(s)	293
BbsI	GAAGAC	2 cut(s)	1773, 3428
BbvCI	CCTCAGC	2 cut(s)	735, 986
BbvI	GCAGC	3 cut(s)	169, 1933, 3252
BceAI	ACGGC	1 cut(s)	7
BcgI	CGANNNNNNTGC	2 cut(s)	2959, 2993
BciT130I	CCWGG	5 cut(s)	276, 1584, 2145, 2669, 2998
BciVI	GTATCC	2 cut(s)	1862, 2141
BcnI	CCSGG	2 cut(s)	1024, 2383
BcoDI	GTCTC	8 cut(s)	30, 294, 671, 1320, 1950, 2018, 2449, 3376
BcuI	ACTAGT	1 cut(s)	1241
BfaI	CTAG	9 cut(s)	83, 449, 534, 1205, 1242, 2021, 2333, 3131, 3194
BfmI	CTRYAG	3 cut(s)	2646, 2934, 3113
BfrI	CTTAAG	3 cut(s)	128, 1265, 2920
BfuI	GTATCC	2 cut(s)	1862, 2141
BglII	AGATCT	1 cut(s)	1033
BisI	GCNGC	6 cut(s)	6, 183, 203, 689, 1947, 3266
BlsI	GCNGC	6 cut(s)	7, 184, 204, 690, 1948, 3267
BmcAI	AGTACT	2 cut(s)	1091, 2415
Bme1390I	CCNGG	7 cut(s)	276, 1024, 1584, 2145, 2383, 2669, 2998
Bme18I	GGWCC	3 cut(s)	56, 350, 2561
BmeRI	GACNNNNNGTC	1 cut(s)	1312
BmeT110I	CYCGRG	1 cut(s)	338
BmgT120I	GGNCC	6 cut(s)	56, 269, 350, 2380, 2561, 2671
BmiI	GGNNCC	3 cut(s)	271, 2562, 3222
BmrFI	CCNGG	7 cut(s)	276, 1024, 1584, 2145, 2383, 2669, 2998
BmsI	GCATC	9 cut(s)	9, 622, 1042, 1267, 1501, 1668, 1706, 2080, 2515
BpiI	GAAGAC	2 cut(s)	1773, 3428
BpmI	CTGGAG	4 cut(s)	924, 2294, 2511, 2675
Bpu10I	CCTNAGC	2 cut(s)	735, 986
BpuEI	CTTGAG	3 cut(s)	593, 2287, 2501
BpuMI	CCSGG	2 cut(s)	1024, 2383
Bsa29I	ATCGAT	1 cut(s)	1918
BsaAI	YACGTR	1 cut(s)	863
BsaBI	GATNNNNATC	1 cut(s)	1281
BsaI	GGTCTC	1 cut(s)	671
BsaJI	CCNNGG	3 cut(s)	274, 339, 1583
BsaWI	WCCGGW	2 cut(s)	802, 2250
BsaXI	ACNNNNNCTCC	4 cut(s)	463, 493, 1023, 1053
Bsc4I	CCNNNNNNNGG	6 cut(s)	53, 281, 968, 1022, 2582, 3003
Bse1I	ACTGG	6 cut(s)	1248, 1933, 1978, 2260, 2587, 3053
Bse3DI	GCAATG	1 cut(s)	2503
Bse8I	GATNNNNATC	1 cut(s)	1281
BseAI	TCCGGA	2 cut(s)	802, 2250
BseBI	CCWGG	5 cut(s)	276, 1584, 2145, 2669, 2998
BseCI	ATCGAT	1 cut(s)	1918
BseDI	CCNNGG	3 cut(s)	274, 339, 1583
BseGI	GGATG	7 cut(s)	760, 891, 1825, 2323, 2456, 3012, 3249
BseJI	GATNNNNATC	1 cut(s)	1281
BseLI	CCNNNNNNNGG	6 cut(s)	53, 281, 968, 1022, 2582, 3003
BseMI	GCAATG	1 cut(s)	2503
BseMII	CTCAG	6 cut(s)	578, 749, 977, 1368, 1851, 1943
BseNI	ACTGG	6 cut(s)	1248, 1933, 1978, 2260, 2587, 3053
BseRI	GAGGAG	3 cut(s)	234, 1349, 1414
BseSI	GKGCMC	1 cut(s)	404
BseXI	GCAGC	3 cut(s)	169, 1933, 3252
BseYI	CCCAGC	1 cut(s)	926
Bsh1236I	CGCG	3 cut(s)	65, 691, 2988
BshFI	GGCC	4 cut(s)	5, 270, 2381, 2672
BshVI	ATCGAT	1 cut(s)	1918
BsiHKCI	CYCGRG	1 cut(s)	338
BsiSI	CCGG	5 cut(s)	803, 1023, 1295, 2251, 2383
BslFI	GGGAC	4 cut(s)	1004, 2555, 2716, 3401
BslI	CCNNNNNNNGG	6 cut(s)	53, 281, 968, 1022, 2582, 3003
BsmAI	GTCTC	8 cut(s)	30, 294, 671, 1320, 1950, 2018, 2449, 3376
BsmBI	CGTCTC	4 cut(s)	30, 2018, 2449, 3376
BsmFI	GGGAC	4 cut(s)	1004, 2555, 2716, 3401
BsmI	GAATGC	2 cut(s)	1908, 2517
BsnI	GGCC	4 cut(s)	5, 270, 2381, 2672
Bso31I	GGTCTC	1 cut(s)	671
BsoBI	CYCGRG	1 cut(s)	338
Bsp1286I	GDGCHC	1 cut(s)	404
Bsp13I	TCCGGA	2 cut(s)	802, 2250
Bsp1407I	TGTACA	1 cut(s)	364
BspACI	CCGC	9 cut(s)	6, 63, 185, 202, 689, 712, 1977, 2986, 3178
BspANI	GGCC	4 cut(s)	5, 270, 2381, 2672
BspCNI	CTCAG	6 cut(s)	579, 748, 978, 1369, 1850, 1944
BspDI	ATCGAT	1 cut(s)	1918
BspEI	TCCGGA	2 cut(s)	802, 2250
BspFNI	CGCG	3 cut(s)	65, 691, 2988
BspLI	GGNNCC	3 cut(s)	271, 2562, 3222
BspPI	GGATC	5 cut(s)	941, 2025, 2309, 2423, 3312
BspTI	CTTAAG	3 cut(s)	128, 1265, 2920
BspTNI	GGTCTC	1 cut(s)	671
BsrDI	GCAATG	1 cut(s)	2503
BsrGI	TGTACA	1 cut(s)	364
BsrI	ACTGG	6 cut(s)	1248, 1933, 1978, 2260, 2587, 3053
BssECI	CCNNGG	3 cut(s)	274, 339, 1583
BssNAI	GTATAC	2 cut(s)	684, 2523
BssSI	CACGAG	1 cut(s)	293
Bst1107I	GTATAC	2 cut(s)	684, 2523
Bst2BI	CACGAG	1 cut(s)	293
Bst2UI	CCWGG	5 cut(s)	276, 1584, 2145, 2669, 2998
Bst4CI	ACNGT	5 cut(s)	847, 1310, 2800, 2938, 3147
Bst6I	CTCTTC	2 cut(s)	3308, 3372
BstAFI	CTTAAG	3 cut(s)	128, 1265, 2920
BstAPI	GCANNNNNTGC	3 cut(s)	440, 1511, 2512
BstAUI	TGTACA	1 cut(s)	364
BstBAI	YACGTR	1 cut(s)	863
BstC8I	GCNNGC	4 cut(s)	712, 970, 2379, 2504
BstDEI	CTNAG	7 cut(s)	587, 735, 986, 1377, 1837, 1952, 3342
BstEII	GGTNACC	1 cut(s)	854
BstF5I	GGATG	7 cut(s)	760, 891, 1825, 2323, 2456, 3012, 3249
BstFNI	CGCG	3 cut(s)	65, 691, 2988
BstHHI	GCGC	1 cut(s)	2173
BstMAI	GTCTC	8 cut(s)	30, 294, 671, 1320, 1950, 2018, 2449, 3376
BstMWI	GCNNNNNNNGC	9 cut(s)	167, 202, 440, 449, 1277, 1511, 2512, 3262, 3338
BstNI	CCWGG	5 cut(s)	276, 1584, 2145, 2669, 2998
BstNSI	RCATGY	3 cut(s)	2539, 2749, 2845
BstPI	GGTNACC	1 cut(s)	854
BstSCI	CCNGG	7 cut(s)	274, 1022, 1582, 2143, 2381, 2667, 2996
BstSFI	CTRYAG	3 cut(s)	2646, 2934, 3113
BstSLI	GKGCMC	1 cut(s)	404
BstUI	CGCG	3 cut(s)	65, 691, 2988
BstV1I	GCAGC	3 cut(s)	169, 1933, 3252
BstV2I	GAAGAC	2 cut(s)	1773, 3428
BstX2I	RGATCY	3 cut(s)	1033, 2017, 2428
BstXI	CCANNNNNNTGG	1 cut(s)	747
BstYI	RGATCY	3 cut(s)	1033, 2017, 2428
BstZ17I	GTATAC	2 cut(s)	684, 2523
Bsu15I	ATCGAT	1 cut(s)	1918
BsuI	GTATCC	2 cut(s)	1862, 2141
BsuRI	GGCC	4 cut(s)	5, 270, 2381, 2672
BsuTUI	ATCGAT	1 cut(s)	1918
BtgZI	GCGATG	2 cut(s)	434, 1341
BtsCI	GGATG	7 cut(s)	760, 891, 1825, 2323, 2456, 3012, 3249
BtsI	GCAGTG	1 cut(s)	2539
BtsIMutI	CAGTG	7 cut(s)	843, 1315, 1926, 2539, 2580, 2943, 3060
Cac8I	GCNNGC	4 cut(s)	712, 970, 2379, 2504
CaiI	CAGNNNCTG	1 cut(s)	2605
CfoI	GCGC	1 cut(s)	2173
Cfr13I	GGNCC	6 cut(s)	56, 269, 350, 2380, 2561, 2671
ClaI	ATCGAT	1 cut(s)	1918
CseI	GACGC	2 cut(s)	2466, 3116
Csp6I	GTAC	6 cut(s)	335, 365, 1090, 1971, 2414, 2880
CviQI	GTAC	6 cut(s)	335, 365, 1090, 1971, 2414, 2880
DdeI	CTNAG	7 cut(s)	587, 735, 986, 1377, 1837, 1952, 3342
DriI	GACNNNNNGTC	1 cut(s)	1312
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	2 cut(s)	3308, 3372
Eam1105I	GACNNNNNGTC	1 cut(s)	1312
EarI	CTCTTC	2 cut(s)	3308, 3372
Eco31I	GGTCTC	1 cut(s)	671
Eco32I	GATATC	2 cut(s)	412, 3395
Eco47I	GGWCC	3 cut(s)	56, 350, 2561
Eco57I	CTGAAG	3 cut(s)	948, 1293, 2880
Eco88I	CYCGRG	1 cut(s)	338
Eco91I	GGTNACC	1 cut(s)	854
EcoO109I	RGGNCCY	4 cut(s)	56, 269, 350, 2561
EcoO65I	GGTNACC	1 cut(s)	854
EcoRI	GAATTC	2 cut(s)	500, 2306
EcoRII	CCWGG	5 cut(s)	274, 1582, 2143, 2667, 2996
EcoRV	GATATC	2 cut(s)	412, 3395
Esp3I	CGTCTC	4 cut(s)	30, 2018, 2449, 3376
FalI	AAGNNNNNCTT	2 cut(s)	1409, 1441
FaqI	GGGAC	4 cut(s)	1004, 2555, 2716, 3401
FauI	CCCGC	2 cut(s)	719, 2993
FauNDI	CATATG	3 cut(s)	1474, 1489, 2901
FblI	GTMKAC	3 cut(s)	465, 683, 2522
Fnu4HI	GCNGC	6 cut(s)	6, 183, 203, 689, 1947, 3266
FokI	GGATG	7 cut(s)	747, 898, 1832, 2310, 2463, 3019, 3236
Fsp4HI	GCNGC	6 cut(s)	6, 183, 203, 689, 1947, 3266
FspBI	CTAG	9 cut(s)	83, 449, 534, 1205, 1242, 2021, 2333, 3131, 3194
GlaI	GCGC	1 cut(s)	2172
GluI	GCNGC	6 cut(s)	6, 183, 203, 689, 1947, 3266
GsaI	CCCAGC	1 cut(s)	930
GsuI	CTGGAG	4 cut(s)	924, 2294, 2511, 2675
HaeIII	GGCC	4 cut(s)	5, 270, 2381, 2672
HapII	CCGG	5 cut(s)	803, 1023, 1295, 2251, 2383
HgaI	GACGC	2 cut(s)	2466, 3116
HhaI	GCGC	1 cut(s)	2173
Hin6I	GCGC	1 cut(s)	2171
HinP1I	GCGC	1 cut(s)	2171
HincII	GTYRAC	2 cut(s)	112, 1834
HindII	GTYRAC	2 cut(s)	112, 1834
HindIII	AAGCTT	1 cut(s)	1001
HpaII	CCGG	5 cut(s)	803, 1023, 1295, 2251, 2383
Hpy99I	CGWCG	3 cut(s)	14, 257, 260
HpyCH4III	ACNGT	5 cut(s)	847, 1310, 2800, 2938, 3147
HpyCH4IV	ACGT	2 cut(s)	862, 3367
HpyF10VI	GCNNNNNNNGC	9 cut(s)	167, 202, 440, 449, 1277, 1511, 2512, 3262, 3338
HpyF3I	CTNAG	7 cut(s)	587, 735, 986, 1377, 1837, 1952, 3342
HpySE526I	ACGT	2 cut(s)	862, 3367
HspAI	GCGC	1 cut(s)	2171
Kpn2I	TCCGGA	2 cut(s)	802, 2250
LmnI	GCTCC	5 cut(s)	193, 247, 641, 1018, 1694
Lsp1109I	GCAGC	3 cut(s)	169, 1933, 3252
LweI	GCATC	9 cut(s)	9, 622, 1042, 1267, 1501, 1668, 1706, 2080, 2515
MaeI	CTAG	9 cut(s)	83, 449, 534, 1205, 1242, 2021, 2333, 3131, 3194
MaeII	ACGT	2 cut(s)	862, 3367
MaeIII	GTNAC	8 cut(s)	33, 793, 854, 869, 911, 931, 1076, 1616
MflI	RGATCY	3 cut(s)	1033, 2017, 2428
MhlI	GDGCHC	1 cut(s)	404
MlyI	GAGTC	5 cut(s)	37, 1322, 1547, 1604, 2698
MmeI	TCCRAC	3 cut(s)	262, 2317, 2347
MroI	TCCGGA	2 cut(s)	802, 2250
MslI	CAYNNNNRTG	2 cut(s)	745, 765
MspA1I	CMGCKG	2 cut(s)	968, 3265
MspCI	CTTAAG	3 cut(s)	128, 1265, 2920
MspI	CCGG	5 cut(s)	803, 1023, 1295, 2251, 2383
MspR9I	CCNGG	7 cut(s)	276, 1024, 1584, 2145, 2383, 2669, 2998
Mva1269I	GAATGC	2 cut(s)	1908, 2517
MvaI	CCWGG	5 cut(s)	276, 1584, 2145, 2669, 2998
MvnI	CGCG	3 cut(s)	65, 691, 2988
MwoI	GCNNNNNNNGC	9 cut(s)	167, 202, 440, 449, 1277, 1511, 2512, 3262, 3338
NciI	CCSGG	2 cut(s)	1024, 2383
NdeI	CATATG	3 cut(s)	1474, 1489, 2901
NlaIV	GGNNCC	3 cut(s)	271, 2562, 3222
NmuCI	GTSAC	4 cut(s)	33, 911, 931, 1076
NspI	RCATGY	3 cut(s)	2539, 2749, 2845
PciI	ACATGT	1 cut(s)	2745
PctI	GAATGC	2 cut(s)	1908, 2517
PflMI	CCANNNNNTGG	1 cut(s)	281
PfoI	TCCNGGA	1 cut(s)	1022
PkrI	GCNGC	6 cut(s)	7, 184, 204, 690, 1948, 3267
PleI	GAGTC	5 cut(s)	37, 1321, 1547, 1604, 2698
PpsI	GAGTC	5 cut(s)	37, 1321, 1547, 1604, 2698
Ppu21I	YACGTR	1 cut(s)	863
PpuMI	RGGWCCY	3 cut(s)	56, 350, 2561
PscI	ACATGT	1 cut(s)	2745
PsiI	TTATAA	1 cut(s)	3215
Psp5II	RGGWCCY	3 cut(s)	56, 350, 2561
Psp6I	CCWGG	5 cut(s)	274, 1582, 2143, 2667, 2996
PspEI	GGTNACC	1 cut(s)	854
PspFI	CCCAGC	1 cut(s)	926
PspGI	CCWGG	5 cut(s)	274, 1582, 2143, 2667, 2996
PspN4I	GGNNCC	3 cut(s)	271, 2562, 3222
PspPI	GGNCC	6 cut(s)	56, 269, 350, 2380, 2561, 2671
PspPPI	RGGWCCY	3 cut(s)	56, 350, 2561
PsrI	GAACNNNNNNTAC	2 cut(s)	327, 359
PstNI	CAGNNNCTG	1 cut(s)	2605
PsuI	RGATCY	3 cut(s)	1033, 2017, 2428
PvuII	CAGCTG	2 cut(s)	968, 3265
RsaI	GTAC	6 cut(s)	336, 366, 1091, 1972, 2415, 2881
RsaNI	GTAC	6 cut(s)	335, 365, 1090, 1971, 2414, 2880
RseI	CAYNNNNRTG	2 cut(s)	745, 765
SatI	GCNGC	6 cut(s)	6, 183, 203, 689, 1947, 3266
Sau96I	GGNCC	6 cut(s)	56, 269, 350, 2380, 2561, 2671
ScaI	AGTACT	2 cut(s)	1091, 2415
SchI	GAGTC	5 cut(s)	37, 1322, 1547, 1604, 2698
ScrFI	CCNGG	7 cut(s)	276, 1024, 1584, 2145, 2383, 2669, 2998
SduI	GDGCHC	1 cut(s)	404
SfaNI	GCATC	9 cut(s)	9, 622, 1042, 1267, 1501, 1668, 1706, 2080, 2515
SfcI	CTRYAG	3 cut(s)	2646, 2934, 3113
SinI	GGWCC	3 cut(s)	56, 350, 2561
SmiMI	CAYNNNNRTG	2 cut(s)	745, 765
SmlI	CTYRAG	6 cut(s)	128, 608, 1265, 2266, 2516, 2920
SmoI	CTYRAG	6 cut(s)	128, 608, 1265, 2266, 2516, 2920
SpeI	ACTAGT	1 cut(s)	1241
SsiI	CCGC	9 cut(s)	6, 63, 185, 202, 689, 712, 1977, 2986, 3178
SspI	AATATT	2 cut(s)	511, 3043
SspMI	CTAG	9 cut(s)	83, 449, 534, 1205, 1242, 2021, 2333, 3131, 3194
StyD4I	CCNGG	7 cut(s)	274, 1022, 1582, 2143, 2381, 2667, 2996
TaaI	ACNGT	5 cut(s)	847, 1310, 2800, 2938, 3147
TaiI	ACGT	2 cut(s)	865, 3370
TaqI	TCGA	7 cut(s)	346, 1918, 2230, 2509, 2773, 3084, 3155
TatI	WGTACW	3 cut(s)	364, 1089, 2413
TauI	GCSGC	3 cut(s)	8, 205, 691
TscAI	CASTG	7 cut(s)	850, 1315, 1933, 2546, 2587, 2943, 3060
TseFI	GTSAC	4 cut(s)	33, 911, 931, 1076
TseI	GCWGC	3 cut(s)	182, 1946, 3265
Tsp45I	GTSAC	4 cut(s)	33, 911, 931, 1076
TspGWI	ACGGA	5 cut(s)	97, 1436, 2697, 3017, 3317
TspRI	CASTG	7 cut(s)	850, 1315, 1933, 2546, 2587, 2943, 3060
Van91I	CCANNNNNTGG	1 cut(s)	281
Vha464I	CTTAAG	3 cut(s)	128, 1265, 2920
VpaK11BI	GGWCC	3 cut(s)	56, 350, 2561
XapI	RAATTY	6 cut(s)	317, 500, 1801, 1853, 1963, 2306
XbaI	TCTAGA	2 cut(s)	2020, 3130
XceI	RCATGY	3 cut(s)	2539, 2749, 2845
XmiI	GTMKAC	3 cut(s)	465, 683, 2522
XspI	CTAG	9 cut(s)	83, 449, 534, 1205, 1242, 2021, 2333, 3131, 3194
ZrmI	AGTACT	2 cut(s)	1091, 2415

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.