Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0000907

Physical Location & Seq

Genomic Coordinates Forward (+)

10146083 .. 10156939

Gene Structure 10857 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G069100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3603 bp

ATGGCGATAGATAGCGGAACCAAGGAGCAGTCGCACAAGGAACATCGGTCCAGGCAGTCGGGGGCCAAGGCCGACAAGAAGAAGCGTGACACTTCCCAAAATGGGAAGAAGCAAAACCCTAAAGCATTTGCTTTTAGCTCAACTGTGAAAGCCAAGCGTCTTCAATCTCGCTCGGTCGAGAAAGAGCAGCGCAGGCTTCATGTCCCAACCATTGATCGTTCCTATGGCGAACAACCTCCATATGTTGTTCTGGTGCATGGACCTCCCAAGGTTGGCAAGTCTTTGTTAATTAAGTCGCTTGTAAAGCATTATACCAAACATAATTTACCAGAGGTTCGAGGCCCGATTACCATTGTTTCAGGAAAGCAAAGGCGGGTACAGTTTGTGGAGTGCCCAAATGATATCAATGGTATGATTGATGCTGCAAAGTTTGCTGATTTAGCATTGCTTCTCATCGATGGAAGCTACGGTTTTGAAATGGAGACATTTGAATTCCTGAATATTTTGCAAGTTCATGGGTTCCCAAAGGTTATGGGAGTTCTTACTCACCTTGATAAGTTTAAAGATGTAAAGAAATTGAAGAAAACAAAGCAACACCTCAAACATCGTTTCTGGACTGAAATATACGATGGAGCTAAATTGTTTTATTTATCTGGTCTCATTCATGGAAAGTATGTCAAACGTGAAATTCATAATCTGGCACGTTTCATATCTGTTATGAAGTTCCATCCTTTATCTTGGCGAACTGCTCATCCATATGTTTTAGTAGATCGTTTTGAAGATGTGACTCCTCCTGAAAAAGTGCGTTTGAATAATAAATGTGATAGAAATGTCACACTGTATGGTTATTTGCGGGGCTGTAACATGAAAAAAGGAACAAAGATTCATATTGCAGGTGTTGGGGATTACAGTTTAGCTGGTATGACAGGCTTAGCTGATCCTTGCCCTTTACCCTCAGCTGCCAAAAAGAAGGGACTGCGTGATAAGGAAAAACTGTTTTACGCACCCATGTCTGGACTTGGGGATCTCCTGTATGATAAAGATGCTGTCTACATAAACATAAATGACCACTTTGTCCAGTTTTCCAATGTTGATGAAAAGGGCGAAGCAACAAATGAAGGAAAGCACGAAGATGTGGGTGTGGCTTTGGTAAAATCTCTTCAGAACACAAAATATTCAGTTGATGAAAAGTTAGAGGAGAGCTTCATTAATCTATTTAGTCGGAAGCCTAATTTATTGTCAAACGCTCAAAGTGATGGAAAAGATACCTATGAATCTAGAGAAGAGATCCGTATGATAGAGCCCTTAGAGGAATATCAGTCTAGGGAAGCAATCAAAGGAGATGGTTCTGCTGAAGAAAGCAATGCGGAGGATTCTGACGGTTCAGAATCAGAATCTTCAGATAAGAATGAAGCAGCTCGTAAAGATGCATCAGATCAAGATGCTAATCTTAAAGATCACTTGAAGGAACATGTGGAGTTTCATGGTGGAAGGTCAAGGAGAAAAGTTATATTTGGAAATGACCTTGATCATAACGATATGGAGGATTCAGATTTTGAGGCTGAAGATGATGGTGATGACAACAATGATGATGATATTCAGGCATCTTCTGGTTCAGATTCAGAGGAAGATGAAGATGTTCATGAAACAGATGATGAGATAGGGAACATTGCAAAGTGGAAAGAATCTTTGGTAGAAAGGACTTCCTCAAGACAAACTATTAACCTTATGCAACTTGTATATGGGAAATCTACATCAATGCCAACAACATCTATCAATGAACATGATAGTAGTGTAGATGATGAAAGTGATGGAGATGATTTTTTTAAGCCAAAAGGAGAAGTAAACAAGAAACATGGAGGAATAGAAGGTGGAAATTGGAATATCGAGGACTGTTCCAAATTCACAAATTATTCAAATCTCAAAGACTGGAAAGAGGAAAAGCTTAGGGAGGGTATTCGTGATCGTTTTGTTACTGGTGATTGGTCGAAAGCTTCTCAAAGAAATCAAGCTGCAGAGGCTAAAGTTTTAGATGATGATGCTGTCTATGGTGACTTTGAAGATTTAGAAACTGGTGAGAAGCATGATGGGAATCATACAGATGATGCAAGCAGTGATGTAAACCACAAGGAAGATGATTTGGCCAAAGAGGAGCGGAGGCTGAAAAAGCTTGCTCTTCGTGCAAAGTTCAATGCTCAATTTGATGGAGCTGAGTCATCTGAAGAGGAGCTTGAGAGTAAACATGAAGGCAAGTCTGGTCGTGATCAATCCAAAGAAAGTGGCTATTTTGACAAGCTGAAGGATGAGATTGAACTTCGGAAGCAAATGAATATAGCTGAACTCAATGACCTGGATGACGCCACCCGATTAGAGATAGAGGGTTTCCGGACAGGGACTTACCTACGGTTGGAGGTTCATGATGTCCCTTATGAGATGGTTGAATATTTTGACCCCTGTCATCCTATTTTGGTTGGAGGAATTGGTCTTGGTGAAGAAAATGTCGGACACATGCAGGCCAGGTTAAAGCGGCATAGATGGCACAAGAAAGTACTTAAGACTAGTGATCCTATTATTGTTTCTATTGGGTGGAGGCGGTACCAAACAATACCTGTTTATGCTATTGAAGATCGCAATGGAAGACATCGCATGCTTAAGTACACTCCCGAACACATGCATTGCCTTGCAATGTTTTGGGGCCCTCTTGCCCCTCCTAATACTGGTGTGGTTGCTTTCCAGAATTTATTGAACAATCAGGCACAATTTAGGATCACAGCAACAGCAGTTGTGCTTGAGTTCAACCATGCATCACGAATAGTGAAGAAACTCAAACTAGTTGGTCACCCCTGCAAGATATTCAAGAACACTGCACTTGTAAAAGATATGTTCACCTCAGATCTTGAAATAGCTCGGTTTGAAGGAGCTGCTGTTCGAACTGTCAGTGGCATTCGGGGGCAGGTGAAAAAGGCTGCAAAAGAAGAAATTGGTAACCAGCCGAAAAAGATGGGTGGACAACCAAAAGAAGGGATTGCTAGGTGTACCTTTGAGGATAAAATTAAGATGAGTGACATTGTATTTTTGCGTGCTTGGACCCAAGTTGAAGTTCCTCAATTTTACAACCCATTGACAACATCACTGCAACCTCGTGATAAGACGTGGCAAGGGATGAAAACTACTGCTGAATTGAGGAGAGAACATAATATTCCTATTCCTGTTAACAAAGATTCACTTTACAAGCCAATTGAAAGGAAGCTGAAGAAGTTCAACCCATTGGTGATTCCTAAGTCATTGCAGGCTGCTTTGCCATTTGCATCAAAGCCTAAGGATATACCCATTAGAGGAAGGCCACTTCTTGAAAATAGAAGAGCAGTTGTCATGGAGCCTCATGAACGGAAAGTTCATGCTCTTGTTCAACATCTTCGATTAATTAGAAATGAGAAGATGAAGAAGCGCAAGCTTAAGGATGATAAAAAAAGGAAAGAAACTGAAGTGCAGAAAGCCAAAGAAGAGCAGTTGTCAAAAAAGCGTCAGAGGGAAGAACGGCGGGAGAGATATCGGGAGCAAGACAAACTGAAGAAGAAAATCAGGAGAAATGCAGAGGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000462 GO:0000469 GO:0000478 GO:0000479 GO:0001882 GO:0001883 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0003924 GO:0005488 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0030686 GO:0031974 GO:0031981 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0032991 GO:0034470 GO:0034511 GO:0034641 GO:0034660 GO:0035639 GO:0036094 GO:0042254 GO:0042274 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0097367 GO:1901265 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

AARP2CN RIBIOP_C

Protein Analysis

1201

Amino Acids

137.24

Weight (kDa)

8.36

Isoelectric Point (pI)

44.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000907)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06720 AT1G06720 AT1G06720
fragaria_vesca	FvH4_4g10660
malus_domestica	MD00G1071300.v1.1 MD00G1152200.v1.1 MD03G1154000.v1.1
prunus_persica	Prupe.1G548200_v2.0.a1 Prupe.8G069100_v2.0.a1 Prupe.8G069100_v2.0.a1
pyrus_communis	pycom03g10780 pycom03g10790 pycom07g03680 pycom11g14630 pycom11g14640
rosa_chinensis	RchiOBHm_Chr2g0114561 RchiOBHm_Chr2g0114571 RchiOBHm_Chr4g0406311 RchiOBHm_Chr5g0051051
rosa_laevigata	RLG00000008777 RLG00000018114 RLG00000034749
rosa_multiflora	Rmu_co8051646.1_g000001 Rmu_sc0000370.1_g000003 Rmu_sc0000371.1_g000013 Rmu_sc0000446.1_g000025 Rmu_sc0000898.1_g000055 Rmu_sc0001520.1_g000010 Rmu_sc0003452.1_g000005 Rmu_sc0030223.1_g000001
rosa_roxburghii	Rroxscaffold_1G00029430 Rroxscaffold_2G00130290 Rroxscaffold_3G00239130 Rroxscaffold_3G00239160
rosa_rugosa	Rorug04G0068100 Rorug04G0068200 Rorug04G0068300 Rorug05G0265700 Rorug07G0181200 Rorug07G0181300 Rorug07G0181400 Rorug07G0181500 Rorug07G0181500 Rorug07G0181600 Rorug07G0181800
rosa_samantha	Rh2AG248700 Rh2BG258300 Rh2BG258500 Rh2CG252100 Rh2CG252200 Rh2CG252500 Rh2DG256800 Rh4AG137200 Rh4BG134800 Rh4CG145400 Rh4DG131800 Rh5AG337900 Rh5BG347600 Rh5CG375000 Rh5DG360700
rosa_wichuraiana	Rw0G006840 Rw0G023620 Rw2G019340 Rw4G011120 Rw5G031930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	884, 2944
AasI	GACNNNNNNGTC	1 cut(s)	1073
Acc36I	ACCTGC	2 cut(s)	884, 2944
Acc65I	GGTACC	1 cut(s)	2595
AccB1I	GGYRCC	1 cut(s)	2595
AccBSI	CCGCTC	1 cut(s)	2155
AccI	GTMKAC	1 cut(s)	1050
AccIII	TCCGGA	1 cut(s)	2385
AciI	CCGC	8 cut(s)	15, 373, 853, 1367, 2155, 2527, 2593, 3541
AclWI	GGATC	5 cut(s)	932, 1032, 1282, 2558, 2774
AcoI	YGGCCR	1 cut(s)	2142
AcsI	RAATTY	4 cut(s)	491, 687, 1901, 2737
AcuI	CTGAAG	9 cut(s)	1145, 1374, 1383, 1584, 2241, 2318, 3272, 3504, 3590
AcyI	GRCGYC	1 cut(s)	2358
AfaI	GTAC	5 cut(s)	378, 2550, 2597, 2657, 3037
AfiI	CCNNNNNNNGG	7 cut(s)	102, 272, 1013, 2407, 2717, 3020, 3335
AflII	CTTAAG	3 cut(s)	2552, 2651, 3455
AflIII	ACRYGT	1 cut(s)	1471
AhlI	ACTAGT	2 cut(s)	2558, 2830
AjiI	CACGTC	1 cut(s)	3153
AjnI	CCWGG	3 cut(s)	50, 2349, 2516
AjuI	GAANNNNNNNTTGG	4 cut(s)	1673, 1705, 3084, 3116
AloI	GAACNNNNNNTCC	4 cut(s)	736, 768, 2910, 2942
Alw26I	GTCTC	2 cut(s)	476, 662
AlwI	GGATC	5 cut(s)	932, 1032, 1282, 2558, 2774
Aor13HI	TCCGGA	1 cut(s)	2385
AoxI	GGCC	7 cut(s)	63, 69, 340, 2142, 2514, 2695, 3341
ApaI	GGGCCC	1 cut(s)	2699
ApeKI	GCWGC	8 cut(s)	187, 422, 959, 1415, 2012, 2921, 2966, 3293
ApoI	RAATTY	4 cut(s)	491, 687, 1901, 2737
AseI	ATTAAT	2 cut(s)	1209, 3422
Asp700I	GAANNNNTTC	2 cut(s)	1638, 3257
Asp718I	GGTACC	1 cut(s)	2595
AspLEI	GCGC	2 cut(s)	192, 3450
AspS9I	GGNCC	7 cut(s)	48, 63, 260, 341, 2695, 2696, 3087
AsuII	TTCGAA	1 cut(s)	2929
AvaII	GGWCC	3 cut(s)	48, 260, 3087
AxyI	CCTNAGG	1 cut(s)	3318
BaeGI	GKGCMC	2 cut(s)	395, 2699
BalI	TGGCCA	1 cut(s)	2144
BanI	GGYRCC	1 cut(s)	2595
BanII	GRGCYC	2 cut(s)	1305, 2699
BarI	GAAGNNNNNNTAC	2 cut(s)	1143, 1175
BauI	CACGAG	1 cut(s)	3141
BbsI	GAAGAC	2 cut(s)	152, 2644
BbvCI	CCTCAGC	1 cut(s)	955
BbvI	GCAGC	8 cut(s)	199, 409, 946, 1427, 1999, 2908, 2953, 3280
BceAI	ACGGC	1 cut(s)	3554
BciT130I	CCWGG	3 cut(s)	52, 2351, 2518
BclI	TGATCA	2 cut(s)	1528, 2263
BcoDI	GTCTC	2 cut(s)	476, 662
BcuI	ACTAGT	2 cut(s)	2558, 2830
BfaI	CTAG	5 cut(s)	1278, 1323, 2559, 2831, 3030
BfmI	CTRYAG	1 cut(s)	2013
BfrI	CTTAAG	3 cut(s)	2552, 2651, 3455
BfuAI	ACCTGC	2 cut(s)	884, 2944
BglII	AGATCT	1 cut(s)	2893
BisI	GCNGC	9 cut(s)	188, 423, 960, 1416, 2013, 2528, 2922, 2967, 3294
BlpI	GCTNAGC	1 cut(s)	931
BlsI	GCNGC	9 cut(s)	189, 424, 961, 1417, 2014, 2529, 2923, 2968, 3295
BmcAI	AGTACT	1 cut(s)	2550
Bme1390I	CCNGG	3 cut(s)	52, 2351, 2518
Bme18I	GGWCC	3 cut(s)	48, 260, 3087
BmgBI	CACGTC	1 cut(s)	3153
BmgT120I	GGNCC	7 cut(s)	48, 63, 260, 341, 2695, 2696, 3087
BmiI	GGNNCC	8 cut(s)	19, 64, 521, 2597, 2696, 2697, 3089, 3378
BmrFI	CCNGG	3 cut(s)	52, 2351, 2518
BoxI	GACNNNNGTC	1 cut(s)	2454
BpiI	GAAGAC	2 cut(s)	152, 2644
Bpu10I	CCTNAGC	2 cut(s)	955, 1946
Bpu1102I	GCTNAGC	1 cut(s)	931
Bpu14I	TTCGAA	1 cut(s)	2929
BpuEI	CTTGAG	3 cut(s)	1693, 2252, 2810
Bsa29I	ATCGAT	1 cut(s)	456
BsaBI	GATNNNNATC	2 cut(s)	1446, 2091
BsaHI	GRCGYC	1 cut(s)	2358
BsaI	GGTCTC	1 cut(s)	662
BsaJI	CCNNGG	3 cut(s)	21, 66, 267
BsaWI	WCCGGW	1 cut(s)	2385
BsaXI	ACNNNNNCTCC	2 cut(s)	2910, 2940
Bsc4I	CCNNNNNNNGG	7 cut(s)	102, 272, 1013, 2407, 2717, 3020, 3335
Bse1I	ACTGG	5 cut(s)	1078, 1934, 1981, 2077, 2722
Bse21I	CCTNAGG	1 cut(s)	3318
Bse3DI	GCAATG	7 cut(s)	443, 1369, 1668, 2638, 2674, 2691, 3284
Bse8I	GATNNNNATC	2 cut(s)	1446, 2091
BseAI	TCCGGA	1 cut(s)	2385
BseBI	CCWGG	3 cut(s)	52, 2351, 2518
BseCI	ATCGAT	1 cut(s)	456
BseDI	CCNNGG	3 cut(s)	21, 66, 267
BseGI	GGATG	7 cut(s)	727, 751, 2308, 2359, 2458, 3168, 3466
BseJI	GATNNNNATC	2 cut(s)	1446, 2091
BseLI	CCNNNNNNNGG	7 cut(s)	102, 272, 1013, 2407, 2717, 3020, 3335
BseMI	GCAATG	7 cut(s)	443, 1369, 1668, 2638, 2674, 2691, 3284
BseMII	CTCAG	3 cut(s)	969, 2202, 2904
BseNI	ACTGG	5 cut(s)	1078, 1934, 1981, 2077, 2722
BseRI	GAGGAG	5 cut(s)	780, 1211, 2165, 2240, 3199
BseSI	GKGCMC	2 cut(s)	395, 2699
BseXI	GCAGC	8 cut(s)	199, 409, 946, 1427, 1999, 2908, 2953, 3280
BsgI	GTGCAG	2 cut(s)	2850, 3509
Bsh1285I	CGRYCG	1 cut(s)	177
BshFI	GGCC	7 cut(s)	65, 71, 342, 2144, 2516, 2697, 3343
BshNI	GGYRCC	1 cut(s)	2595
BshVI	ATCGAT	1 cut(s)	456
BsiEI	CGRYCG	1 cut(s)	177
BsiSI	CCGG	1 cut(s)	2386
BslFI	GGGAC	4 cut(s)	188, 987, 2407, 2408
BslI	CCNNNNNNNGG	7 cut(s)	102, 272, 1013, 2407, 2717, 3020, 3335
BsmAI	GTCTC	2 cut(s)	476, 662
BsmFI	GGGAC	4 cut(s)	188, 987, 2407, 2408
BsmI	GAATGC	1 cut(s)	2943
BsnI	GGCC	7 cut(s)	65, 71, 342, 2144, 2516, 2697, 3343
Bso31I	GGTCTC	1 cut(s)	662
Bsp119I	TTCGAA	1 cut(s)	2929
Bsp120I	GGGCCC	1 cut(s)	2695
Bsp1286I	GDGCHC	3 cut(s)	395, 1305, 2699
Bsp13I	TCCGGA	1 cut(s)	2385
Bsp1720I	GCTNAGC	1 cut(s)	931
BspACI	CCGC	8 cut(s)	15, 373, 853, 1367, 2155, 2527, 2593, 3541
BspANI	GGCC	7 cut(s)	65, 71, 342, 2144, 2516, 2697, 3343
BspCNI	CTCAG	3 cut(s)	968, 2203, 2903
BspDI	ATCGAT	1 cut(s)	456
BspEI	TCCGGA	1 cut(s)	2385
BspHI	TCATGA	3 cut(s)	1642, 2416, 3382
BspLI	GGNNCC	8 cut(s)	19, 64, 521, 2597, 2696, 2697, 3089, 3378
BspMAI	CTGCAG	1 cut(s)	2017
BspMI	ACCTGC	2 cut(s)	884, 2944
BspPI	GGATC	5 cut(s)	932, 1032, 1282, 2558, 2774
BspQI	GCTCTTC	3 cut(s)	2181, 3355, 3498
BspT104I	TTCGAA	1 cut(s)	2929
BspT107I	GGYRCC	1 cut(s)	2595
BspTI	CTTAAG	3 cut(s)	2552, 2651, 3455
BspTNI	GGTCTC	1 cut(s)	662
BsrBI	CCGCTC	1 cut(s)	2155
BsrDI	GCAATG	7 cut(s)	443, 1369, 1668, 2638, 2674, 2691, 3284
BsrI	ACTGG	5 cut(s)	1078, 1934, 1981, 2077, 2722
BssECI	CCNNGG	3 cut(s)	21, 66, 267
BssNI	GRCGYC	1 cut(s)	2358
BssSI	CACGAG	1 cut(s)	3141
BssT1I	CCWWGG	3 cut(s)	21, 66, 267
Bst2BI	CACGAG	1 cut(s)	3141
Bst2UI	CCWGG	3 cut(s)	52, 2351, 2518
Bst6I	CTCTTC	6 cut(s)	1164, 1278, 2181, 2217, 3355, 3498
BstACI	GRCGYC	1 cut(s)	2358
BstAFI	CTTAAG	3 cut(s)	2552, 2651, 3455
BstAPI	GCANNNNNTGC	1 cut(s)	431
BstBI	TTCGAA	1 cut(s)	2929
BstC8I	GCNNGC	8 cut(s)	194, 2110, 2172, 2514, 2648, 3081, 3291, 3452
BstDEI	CTNAG	8 cut(s)	931, 955, 1306, 1946, 2211, 2890, 3279, 3318
BstEII	GGTNACC	2 cut(s)	2837, 2984
BstF5I	GGATG	7 cut(s)	727, 751, 2308, 2359, 2458, 3168, 3466
BstHHI	GCGC	2 cut(s)	192, 3450
BstMAI	GTCTC	2 cut(s)	476, 662
BstMCI	CGRYCG	1 cut(s)	177
BstMWI	GCNNNNNNNGC	8 cut(s)	193, 304, 431, 440, 2018, 2167, 2180, 2536
BstNI	CCWGG	3 cut(s)	52, 2351, 2518
BstNSI	RCATGY	4 cut(s)	1475, 2512, 2650, 2674
BstPAI	GACNNNNGTC	1 cut(s)	2454
BstPI	GGTNACC	2 cut(s)	2837, 2984
BstSCI	CCNGG	3 cut(s)	50, 2349, 2516
BstSFI	CTRYAG	1 cut(s)	2013
BstSLI	GKGCMC	2 cut(s)	395, 2699
BstV1I	GCAGC	8 cut(s)	199, 409, 946, 1427, 1999, 2908, 2953, 3280
BstV2I	GAAGAC	2 cut(s)	152, 2644
BstX2I	RGATCY	3 cut(s)	1024, 1287, 2893
BstYI	RGATCY	3 cut(s)	1024, 1287, 2893
Bsu15I	ATCGAT	1 cut(s)	456
Bsu36I	CCTNAGG	1 cut(s)	3318
BsuRI	GGCC	7 cut(s)	65, 71, 342, 2144, 2516, 2697, 3343
BsuTUI	ATCGAT	1 cut(s)	456
BtgZI	GCGATG	1 cut(s)	2627
BtrI	CACGTC	1 cut(s)	3153
BtsCI	GGATG	7 cut(s)	727, 751, 2308, 2359, 2458, 3168, 3466
BtsI	GCAGTG	3 cut(s)	2119, 2862, 3131
BtsIMutI	CAGTG	5 cut(s)	836, 2119, 2862, 2944, 3131
BveI	ACCTGC	2 cut(s)	884, 2944
Cac8I	GCNNGC	8 cut(s)	194, 2110, 2172, 2514, 2648, 3081, 3291, 3452
CciI	TCATGA	3 cut(s)	1642, 2416, 3382
CfoI	GCGC	2 cut(s)	192, 3450
Cfr13I	GGNCC	7 cut(s)	48, 63, 260, 341, 2695, 2696, 3087
ClaI	ATCGAT	1 cut(s)	456
CseI	GACGC	3 cut(s)	146, 2366, 3512
Csp6I	GTAC	5 cut(s)	377, 2549, 2596, 2656, 3036
CspCI	CAANNNNNGTGG	2 cut(s)	2260, 2295
CviQI	GTAC	5 cut(s)	377, 2549, 2596, 2656, 3036
DdeI	CTNAG	8 cut(s)	931, 955, 1306, 1946, 2211, 2890, 3279, 3318
DraI	TTTAAA	1 cut(s)	562
DrdI	GACNNNNNNGTC	1 cut(s)	1073
DseDI	GACNNNNNNGTC	1 cut(s)	1073
EaeI	YGGCCR	1 cut(s)	2142
Eam1104I	CTCTTC	6 cut(s)	1164, 1278, 2181, 2217, 3355, 3498
EarI	CTCTTC	6 cut(s)	1164, 1278, 2181, 2217, 3355, 3498
Eco130I	CCWWGG	3 cut(s)	21, 66, 267
Eco24I	GRGCYC	2 cut(s)	1305, 2699
Eco31I	GGTCTC	1 cut(s)	662
Eco32I	GATATC	2 cut(s)	403, 3551
Eco47I	GGWCC	3 cut(s)	48, 260, 3087
Eco57I	CTGAAG	9 cut(s)	1145, 1374, 1383, 1584, 2241, 2318, 3272, 3504, 3590
Eco81I	CCTNAGG	1 cut(s)	3318
Eco91I	GGTNACC	2 cut(s)	2837, 2984
EcoO109I	RGGNCCY	2 cut(s)	2695, 2696
EcoO65I	GGTNACC	2 cut(s)	2837, 2984
EcoRI	GAATTC	1 cut(s)	491
EcoRII	CCWGG	3 cut(s)	50, 2349, 2516
EcoRV	GATATC	2 cut(s)	403, 3551
EcoT14I	CCWWGG	3 cut(s)	21, 66, 267
EcoT22I	ATGCAT	3 cut(s)	1432, 2676, 2806
EcoT38I	GRGCYC	2 cut(s)	1305, 2699
ErhI	CCWWGG	3 cut(s)	21, 66, 267
FalI	AAGNNNNNCTT	4 cut(s)	2214, 2246, 3210, 3242
FaqI	GGGAC	4 cut(s)	188, 987, 2407, 2408
FauI	CCCGC	3 cut(s)	366, 846, 3534
FauNDI	CATATG	2 cut(s)	241, 757
FbaI	TGATCA	2 cut(s)	1528, 2263
FblI	GTMKAC	1 cut(s)	1050
Fnu4HI	GCNGC	9 cut(s)	188, 423, 960, 1416, 2013, 2528, 2922, 2967, 3294
FokI	GGATG	7 cut(s)	714, 738, 2315, 2366, 2445, 3175, 3473
FriOI	GRGCYC	2 cut(s)	1305, 2699
Fsp4HI	GCNGC	9 cut(s)	188, 423, 960, 1416, 2013, 2528, 2922, 2967, 3294
FspBI	CTAG	5 cut(s)	1278, 1323, 2559, 2831, 3030
GlaI	GCGC	2 cut(s)	191, 3449
GluI	GCNGC	9 cut(s)	188, 423, 960, 1416, 2013, 2528, 2922, 2967, 3294
HaeIII	GGCC	7 cut(s)	65, 71, 342, 2144, 2516, 2697, 3343
HapII	CCGG	1 cut(s)	2386
HgaI	GACGC	3 cut(s)	146, 2366, 3512
HhaI	GCGC	2 cut(s)	192, 3450
Hin1I	GRCGYC	1 cut(s)	2358
Hin6I	GCGC	2 cut(s)	190, 3448
HinP1I	GCGC	2 cut(s)	190, 3448
HincII	GTYRAC	1 cut(s)	3214
HindII	GTYRAC	1 cut(s)	3214
HindIII	AAGCTT	4 cut(s)	1943, 1992, 2168, 3452
HpaI	GTTAAC	1 cut(s)	3214
HpaII	CCGG	1 cut(s)	2386
Hpy166II	GTNNAC	9 cut(s)	1051, 1846, 2122, 2240, 2658, 2886, 3008, 3036, 3214
Hpy8I	GTNNAC	9 cut(s)	1051, 1846, 2122, 2240, 2658, 2886, 3008, 3036, 3214
HpyCH4IV	ACGT	3 cut(s)	682, 703, 3152
HpyF10VI	GCNNNNNNNGC	8 cut(s)	193, 304, 431, 440, 2018, 2167, 2180, 2536
HpyF3I	CTNAG	8 cut(s)	931, 955, 1306, 1946, 2211, 2890, 3279, 3318
HpySE526I	ACGT	3 cut(s)	682, 703, 3152
Hsp92I	GRCGYC	1 cut(s)	2358
HspAI	GCGC	2 cut(s)	190, 3448
Kpn2I	TCCGGA	1 cut(s)	2385
KpnI	GGTACC	1 cut(s)	2599
Ksp22I	TGATCA	2 cut(s)	1528, 2263
KspAI	GTTAAC	1 cut(s)	3214
LguI	GCTCTTC	3 cut(s)	2181, 3355, 3498
LmnI	GCTCC	8 cut(s)	25, 632, 2152, 2207, 2227, 2918, 3376, 3556
Lsp1109I	GCAGC	8 cut(s)	199, 409, 946, 1427, 1999, 2908, 2953, 3280
MaeI	CTAG	5 cut(s)	1278, 1323, 2559, 2831, 3030
MaeII	ACGT	3 cut(s)	682, 703, 3152
MaeIII	GTNAC	9 cut(s)	86, 784, 832, 860, 1972, 2051, 2837, 2984, 3062
MbiI	CCGCTC	1 cut(s)	2155
MfeI	CAATTG	1 cut(s)	3237
MflI	RGATCY	3 cut(s)	1024, 1287, 2893
MhlI	GDGCHC	3 cut(s)	395, 1305, 2699
MlsI	TGGCCA	1 cut(s)	2144
MluNI	TGGCCA	1 cut(s)	2144
MlyI	GAGTC	2 cut(s)	781, 2222
MmeI	TCCRAC	4 cut(s)	1202, 2388, 2452, 2482
Mox20I	TGGCCA	1 cut(s)	2144
Mph1103I	ATGCAT	3 cut(s)	1432, 2676, 2806
MroI	TCCGGA	1 cut(s)	2385
MroXI	GAANNNNTTC	2 cut(s)	1638, 3257
MscI	TGGCCA	1 cut(s)	2144
MslI	CAYNNNNRTG	3 cut(s)	756, 1131, 2100
Msp20I	TGGCCA	1 cut(s)	2144
MspA1I	CMGCKG	1 cut(s)	959
MspCI	CTTAAG	3 cut(s)	2552, 2651, 3455
MspI	CCGG	1 cut(s)	2386
MspR9I	CCNGG	3 cut(s)	52, 2351, 2518
MunI	CAATTG	1 cut(s)	3237
Mva1269I	GAATGC	1 cut(s)	2943
MvaI	CCWGG	3 cut(s)	52, 2351, 2518
MwoI	GCNNNNNNNGC	8 cut(s)	193, 304, 431, 440, 2018, 2167, 2180, 2536
NdeI	CATATG	2 cut(s)	241, 757
NlaIV	GGNNCC	8 cut(s)	19, 64, 521, 2597, 2696, 2697, 3089, 3378
NmuCI	GTSAC	6 cut(s)	86, 784, 832, 2051, 2837, 3062
NsiI	ATGCAT	3 cut(s)	1432, 2676, 2806
NspI	RCATGY	4 cut(s)	1475, 2512, 2650, 2674
NspV	TTCGAA	1 cut(s)	2929
PacI	TTAATTAA	1 cut(s)	291
PaeI	GCATGC	1 cut(s)	2650
PagI	TCATGA	3 cut(s)	1642, 2416, 3382
PaqCI	CACCTGC	2 cut(s)	884, 2944
PciI	ACATGT	1 cut(s)	1471
PciSI	GCTCTTC	3 cut(s)	2181, 3355, 3498
PctI	GAATGC	1 cut(s)	2943
PdmI	GAANNNNTTC	2 cut(s)	1638, 3257
PkrI	GCNGC	9 cut(s)	189, 424, 961, 1417, 2014, 2529, 2923, 2968, 3295
PleI	GAGTC	2 cut(s)	781, 2221
PpsI	GAGTC	2 cut(s)	781, 2221
PscI	ACATGT	1 cut(s)	1471
PshAI	GACNNNNGTC	1 cut(s)	2454
PshBI	ATTAAT	2 cut(s)	1209, 3422
Psp6I	CCWGG	3 cut(s)	50, 2349, 2516
PspEI	GGTNACC	2 cut(s)	2837, 2984
PspGI	CCWGG	3 cut(s)	50, 2349, 2516
PspN4I	GGNNCC	8 cut(s)	19, 64, 521, 2597, 2696, 2697, 3089, 3378
PspOMI	GGGCCC	1 cut(s)	2695
PspPI	GGNCC	7 cut(s)	48, 63, 260, 341, 2695, 2696, 3087
PstI	CTGCAG	1 cut(s)	2017
PsuI	RGATCY	3 cut(s)	1024, 1287, 2893
PvuII	CAGCTG	1 cut(s)	959
RsaI	GTAC	5 cut(s)	378, 2550, 2597, 2657, 3037
RsaNI	GTAC	5 cut(s)	377, 2549, 2596, 2656, 3036
RseI	CAYNNNNRTG	3 cut(s)	756, 1131, 2100
SapI	GCTCTTC	3 cut(s)	2181, 3355, 3498
SatI	GCNGC	9 cut(s)	188, 423, 960, 1416, 2013, 2528, 2922, 2967, 3294
Sau96I	GGNCC	7 cut(s)	48, 63, 260, 341, 2695, 2696, 3087
ScaI	AGTACT	1 cut(s)	2550
SchI	GAGTC	2 cut(s)	781, 2222
ScrFI	CCNGG	3 cut(s)	52, 2351, 2518
SduI	GDGCHC	3 cut(s)	395, 1305, 2699
SfcI	CTRYAG	1 cut(s)	2013
SfuI	TTCGAA	1 cut(s)	2929
SinI	GGWCC	3 cut(s)	48, 260, 3087
SmiMI	CAYNNNNRTG	3 cut(s)	756, 1131, 2100
SmlI	CTYRAG	6 cut(s)	1708, 2231, 2552, 2651, 2789, 3455
SmoI	CTYRAG	6 cut(s)	1708, 2231, 2552, 2651, 2789, 3455
SpeI	ACTAGT	2 cut(s)	2558, 2830
SphI	GCATGC	1 cut(s)	2650
SsiI	CCGC	8 cut(s)	15, 373, 853, 1367, 2155, 2527, 2593, 3541
SspI	AATATT	4 cut(s)	502, 1175, 2444, 3199
SspMI	CTAG	5 cut(s)	1278, 1323, 2559, 2831, 3030
StyD4I	CCNGG	3 cut(s)	50, 2349, 2516
StyI	CCWWGG	3 cut(s)	21, 66, 267
TaiI	ACGT	3 cut(s)	685, 706, 3155
TaqI	TCGA	7 cut(s)	177, 337, 456, 1887, 1988, 2929, 3418
TaqII	GACCGA	2 cut(s)	36, 163
TatI	WGTACW	2 cut(s)	2548, 2655
TauI	GCSGC	1 cut(s)	2530
TscAI	CASTG	5 cut(s)	843, 2119, 2869, 2944, 3138
TseFI	GTSAC	6 cut(s)	86, 784, 832, 2051, 2837, 3062
TseI	GCWGC	8 cut(s)	187, 422, 959, 1415, 2012, 2921, 2966, 3293
Tsp45I	GTSAC	6 cut(s)	86, 784, 832, 2051, 2837, 3062
TspGWI	ACGGA	2 cut(s)	1280, 3403
TspRI	CASTG	5 cut(s)	843, 2119, 2869, 2944, 3138
Vha464I	CTTAAG	3 cut(s)	2552, 2651, 3455
VpaK11BI	GGWCC	3 cut(s)	48, 260, 3087
VspI	ATTAAT	2 cut(s)	1209, 3422
XapI	RAATTY	4 cut(s)	491, 687, 1901, 2737
XbaI	TCTAGA	1 cut(s)	1277
XceI	RCATGY	4 cut(s)	1475, 2512, 2650, 2674
XmiI	GTMKAC	1 cut(s)	1050
XmnI	GAANNNNTTC	2 cut(s)	1638, 3257
XspI	CTAG	5 cut(s)	1278, 1323, 2559, 2831, 3030
ZrmI	AGTACT	1 cut(s)	2550
Zsp2I	ATGCAT	3 cut(s)	1432, 2676, 2806

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.