Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0000907

Physical Location & Seq

Genomic Coordinates Forward (+)

14720266 .. 14727949

Gene Structure 7684 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g14630.13

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2844 bp

ATGGCGATAGACAGCGGAACCAAGGAGCAGCCGCACAAGGAGCACAGGTCCCGGCAGTCCGGCGCCAAAGCCGAGAAGAAGAAGAAGCCGGACGCCTCCCAAAACGGCAATAAGCGAAACCCTAAGGCTTTCGCTTACCAATCAGCCGGGAAGGCCCAGCGTCTTCACTCTCGCGACGTCGAGAAGCAGCAGCGCCGCCTTCACGTCCCCACCATCGATCGTTCGTACGGTGAGCCGGCTCCGTATGTCGTTCTGGTTCATGGACCTCCCAAGGTTGGGAAGTCTTTGTTGATTAAGTCGCTTGTGAAGCATTATACCAAGCATAATTTACCGGAGGTTCGAGGCCCGATTACCATTGTTTCAGGGAAGCAAAGGCGGGTACAGTTTGTGGAGTGCCCAAATGATATCAATGGTATGATTGATGCCGCAAAGTTTGCAGATTTAGCATTACTTCTTATAGACGGAAGCTACGGTTTTGAAATGGAAACATTTGAATTCCTGAATATATTACAAGTTCATGGTTTCCCAAAGGTTATGGGAGTTCTTACTCACCTTGACAAGTTTAAAGATGTAAAGAAATTGAAGAAAACAAAGCAGCACCTCAAACATCGTTTCTGGACTGAAATATATGATGGAGCTAAATTGTTTTATTTATCTGGTCTCATTCATGGAAAGTATGTCAAACGTGAAATTCACAATCTGGCACGTTTCATATCCGTTATGAAGTTTCATCCTTTATCTTGGAGAACCGCTCATCCTTATGTTTTGGTAGATCGTTTTGAAGATGTCACTCCACCTGAAAAAGTGCGTTTGAATAATAAATGCGATAGAAATGTCACACTGTATGGTTATTTGCGGGGATGTAACATGAAAAAAGGAACAAAGATACATGTTGCAGGTGTTGGGGATTACAGTTTAGCTGGTATGACAGGATTAGCTGATCCCTGTCCTTTACCCTCAGCTGCCAAAAAGAAGGGACTGCGTGATAAGGAAAAGCTGTTTTATGCACCCATGTCTGGACTTGGGGATCTCCTGTATGATAAAGATGCTGTCTATATAAACATAAATGACCACTTTGTCCAGTTTTCAAATGCTGATGAAAAGGGTGAAGCAACAAAACAAGGAAAGCCCCAAGATGTGGGTGTGGCTTTGGTAAAATCTCTTCAGAACACAAAATATTCAGTTGATGAAAAGTTAGAAGAGAGCTTCATTAATCTATTTAGCCGGAAGCCTAATTTGTTATCGAATGCTCAAAGTGATGGAATAGATACTGTTGAATCTAGAGAACAGAATCGTATGATAGAGCCTTCAGAGGAATATCACTCTGGGGAAGCTATCAAAGGTGATGGTTCCGCTGAAGAAAGCAATGCAGACGATTCTGATGGTTCTGAATCAGAATCTTTAGATAAGAATGAAGCAGCTCATAAAGATGCATCAGATCAAGATGCTACTCTTAAAGATCACTTGAAGGAACATGTTGAGATTCATGATGGAAGGTCAAGGAGAAAAGTTATCTTTAGAAATGACGTTGATCATAACAATATGGAGGATTCAGCTGAAGAGACTGAAGAAGAAGATGATTGTGATAATGACAACAACAATGATACTGATAATCAGGAATCTTCTGGTTCAGATTCTTCAGCGGAAGAGGAAGATGATCATGAAACAGATGAGACGGGAAACATTGCAAAGTGGAAAGAATCTTTGGTGCAAAGGGCTTCATCAAGACAAACTATTAACCTTATGCACCTTGTATATGGGAAATCTACGTCAATGCCAACAACTTCTAGCAACGAAGATCACAATAGTAGTAGTGCAGATGATGAAAGTGATGAAGATGATGACTTTTTTGTGCCAAAAGGAGAAGGAAACAAGAAACATGGAGGAATAGAAGGTGGAAACTGGGATGTCGAGGACTGTTCCAAATTCACAAATTATTCAAATATCAAAGACTGGAAAGAGGAAAAGCTTAGAGAGGGTATTCGTGATCGTTTTGTCACTGGTGATTGGTCGAAAGCTTCTCAAAGAAATCAACCCACTGTAGCTAAAGATGAAGATGATGATGCTCTCTATGGTGACTTTGAAGATTTAGAAACAGGTGAGAAGCATGGTGGGAACCATACAGATGACGCAAGCGTTGGTGCAAACCACAAGGAAGATGATTCGGCCAAAGAGGAGAGGAGGCTGAAAAAGCTAGCTCTTCGTGCAAAGTTTGATGCTCAGTTTGATGGAGCTGAGCCATCTGAAGAGGAGCTTGATGATAAACCTGAAGGCAAGTTTGGTCAAGATCAACCCAAAGAAAGTGACTACTTTGACAAGTTGAAGGATGAGATTGAACTTCGGAAGCAAAAGAATATAGCTGAACTCGATGAACTGGATGAGGCCACCCGACTAGAAGTTGAGGGTTTTCGGACAGGGACATACCTACGGCTGGAGGTTCATGATGTTCCTTATGAGATGGTTGAATATTTTGATCCCTGCCATCCTATTTTGGTTGGAGGAATTGGTCTTGGTGAAGAAAATGTCGGATATATGCAGGTCAGGTTAAAGCGGCATAGGTGGCATAAGAAAGTACTTAAGAATAACGATCCCATTATTGTTTCTATTGGGTGGAGGAGATACCAAACAATACCAGTTTATGCTATTGAGGATCGCAATGGAAGGCATCGCATGCTTAAATACACTCCTGAACACATGCATTGCCTTGCAATGTTTTGGGGCCCTCTTGCCCCTCCTAATACTGGTGTGGTTGCTTTCCAGAATTTATCAAACAATCAGGCACAGTTTAGGATCGATCGACAGCAACTGCAGTTGTGCTTGAGTTCAACCATGCATCACGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000462 GO:0000469 GO:0000478 GO:0000479 GO:0001882 GO:0001883 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0003924 GO:0005488 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0030686 GO:0031974 GO:0031981 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0032991 GO:0034470 GO:0034511 GO:0034641 GO:0034660 GO:0035639 GO:0036094 GO:0042254 GO:0042274 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0097367 GO:1901265 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

AARP2CN RIBIOP_C

Protein Analysis

948

Amino Acids

107.49

Weight (kDa)

5.64

Isoelectric Point (pI)

46.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000907)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06720 AT1G06720 AT1G06720
fragaria_vesca	FvH4_4g10660
malus_domestica	MD00G1071300.v1.1 MD00G1152200.v1.1 MD03G1154000.v1.1
prunus_persica	Prupe.1G548200_v2.0.a1 Prupe.8G069100_v2.0.a1 Prupe.8G069100_v2.0.a1
pyrus_communis	pycom03g10780 pycom03g10790 pycom07g03680 pycom11g14630 pycom11g14640
rosa_chinensis	RchiOBHm_Chr2g0114561 RchiOBHm_Chr2g0114571 RchiOBHm_Chr4g0406311 RchiOBHm_Chr5g0051051
rosa_laevigata	RLG00000008777 RLG00000018114 RLG00000034749
rosa_multiflora	Rmu_co8051646.1_g000001 Rmu_sc0000370.1_g000003 Rmu_sc0000371.1_g000013 Rmu_sc0000446.1_g000025 Rmu_sc0000898.1_g000055 Rmu_sc0001520.1_g000010 Rmu_sc0003452.1_g000005 Rmu_sc0030223.1_g000001
rosa_roxburghii	Rroxscaffold_1G00029430 Rroxscaffold_2G00130290 Rroxscaffold_3G00239130 Rroxscaffold_3G00239160
rosa_rugosa	Rorug04G0068100 Rorug04G0068200 Rorug04G0068300 Rorug05G0265700 Rorug07G0181200 Rorug07G0181300 Rorug07G0181400 Rorug07G0181500 Rorug07G0181500 Rorug07G0181600 Rorug07G0181800
rosa_samantha	Rh2AG248700 Rh2BG258300 Rh2BG258500 Rh2CG252100 Rh2CG252200 Rh2CG252500 Rh2DG256800 Rh4AG137200 Rh4BG134800 Rh4CG145400 Rh4DG131800 Rh5AG337900 Rh5BG347600 Rh5CG375000 Rh5DG360700
rosa_wichuraiana	Rw0G006840 Rw0G023620 Rw2G019340 Rw4G011120 Rw5G031930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	887
AasI	GACNNNNNNGTC	1 cut(s)	1076
AatII	GACGTC	1 cut(s)	180
Acc36I	ACCTGC	2 cut(s)	887, 2527
AccB1I	GGYRCC	1 cut(s)	62
AccB7I	CCANNNNNTGG	1 cut(s)	1138
AccBSI	CCGCTC	1 cut(s)	752
AccII	CGCG	1 cut(s)	174
AclWI	GGATC	6 cut(s)	935, 1035, 2468, 2582, 2658, 2798
AcoI	YGGCCR	1 cut(s)	2166
AcsI	RAATTY	4 cut(s)	494, 690, 1925, 2761
AcuI	CTGAAG	8 cut(s)	1148, 1293, 1377, 1578, 1587, 1623, 2265, 2289
AcyI	GRCGYC	3 cut(s)	63, 93, 177
AfaI	GTAC	3 cut(s)	227, 381, 2574
AfiI	CCNNNNNNNGG	6 cut(s)	275, 276, 1016, 1138, 2431, 2741
AflII	CTTAAG	1 cut(s)	2576
AflIII	ACRYGT	2 cut(s)	889, 1474
AjiI	CACGTC	1 cut(s)	205
AjuI	GAANNNNNNNTTGG	4 cut(s)	1688, 1720, 2262, 2294
AloI	GAACNNNNNNTCC	2 cut(s)	739, 771
Alw21I	GWGCWC	1 cut(s)	45
Alw26I	GTCTC	3 cut(s)	665, 1556, 1667
AlwI	GGATC	6 cut(s)	935, 1035, 2468, 2582, 2658, 2798
AlwNI	CAGNNNCTG	1 cut(s)	2806
AoxI	GGCC	5 cut(s)	153, 343, 2166, 2382, 2719
ApaI	GGGCCC	1 cut(s)	2723
ApeKI	GCWGC	6 cut(s)	28, 187, 190, 595, 962, 1418
ApoI	RAATTY	4 cut(s)	494, 690, 1925, 2761
AseI	ATTAAT	1 cut(s)	1212
AspLEI	GCGC	2 cut(s)	65, 195
AspS9I	GGNCC	6 cut(s)	48, 154, 263, 344, 2719, 2720
AsuC2I	CCSGG	2 cut(s)	52, 148
AsuHPI	GGTGA	8 cut(s)	242, 542, 1118, 1355, 2015, 2087, 2111, 2525
AsuNHI	GCTAGC	1 cut(s)	2194
AvaII	GGWCC	2 cut(s)	48, 263
AxyI	CCTNAGG	1 cut(s)	123
BaeGI	GKGCMC	2 cut(s)	398, 2723
BanI	GGYRCC	1 cut(s)	62
BanII	GRGCYC	1 cut(s)	2723
BarI	GAAGNNNNNNTAC	2 cut(s)	1146, 1178
BbsI	GAAGAC	1 cut(s)	155
Bbv12I	GWGCWC	1 cut(s)	45
BbvCI	CCTCAGC	1 cut(s)	958
BbvI	GCAGC	6 cut(s)	40, 199, 202, 607, 949, 1430
BceAI	ACGGC	2 cut(s)	121, 2444
BclI	TGATCA	2 cut(s)	1531, 1657
BcnI	CCSGG	2 cut(s)	52, 148
BcoDI	GTCTC	3 cut(s)	665, 1556, 1667
BfaI	CTAG	4 cut(s)	1281, 1788, 2195, 2393
BfmI	CTRYAG	2 cut(s)	2040, 2807
BfoI	RGCGCY	2 cut(s)	66, 196
BfrI	CTTAAG	1 cut(s)	2576
BfuAI	ACCTGC	2 cut(s)	887, 2527
BglI	GCCNNNNNGGC	1 cut(s)	152
BlpI	GCTNAGC	1 cut(s)	2235
BmcAI	AGTACT	1 cut(s)	2574
Bme1390I	CCNGG	2 cut(s)	52, 148
Bme18I	GGWCC	2 cut(s)	48, 263
BmgBI	CACGTC	1 cut(s)	205
BmgT120I	GGNCC	6 cut(s)	48, 154, 263, 344, 2719, 2720
BmiI	GGNNCC	8 cut(s)	19, 50, 64, 240, 1351, 2117, 2720, 2721
BmrFI	CCNGG	2 cut(s)	52, 148
BmrI	ACTGGG	1 cut(s)	1912
BmsI	GCATC	8 cut(s)	412, 1036, 1420, 1435, 1442, 2053, 2206, 2674
BmtI	GCTAGC	1 cut(s)	2198
BmuI	ACTGGG	1 cut(s)	1912
BpiI	GAAGAC	1 cut(s)	155
BplI	GAGNNNNNCTC	2 cut(s)	736, 768
BpmI	CTGGAG	1 cut(s)	2453
Bpu10I	CCTNAGC	1 cut(s)	958
Bpu1102I	GCTNAGC	1 cut(s)	2235
BpuEI	CTTGAG	1 cut(s)	2839
BpuMI	CCSGG	2 cut(s)	52, 148
Bsa29I	ATCGAT	2 cut(s)	216, 2793
BsaHI	GRCGYC	3 cut(s)	63, 93, 177
BsaI	GGTCTC	1 cut(s)	665
BsaJI	CCNNGG	2 cut(s)	21, 270
BsaWI	WCCGGW	1 cut(s)	331
BsaXI	ACNNNNNCTCC	2 cut(s)	32, 62
Bsc4I	CCNNNNNNNGG	6 cut(s)	275, 276, 1016, 1138, 2431, 2741
Bse118I	RCCGGY	1 cut(s)	235
Bse1I	ACTGG	7 cut(s)	1081, 1907, 1958, 2005, 2379, 2633, 2746
Bse21I	CCTNAGG	1 cut(s)	123
Bse3DI	GCAATG	5 cut(s)	1372, 1683, 2662, 2698, 2715
BseCI	ATCGAT	2 cut(s)	216, 2793
BseDI	CCNNGG	2 cut(s)	21, 270
BseGI	GGATG	7 cut(s)	730, 754, 866, 1912, 2332, 2383, 2482
BseLI	CCNNNNNNNGG	6 cut(s)	275, 276, 1016, 1138, 2431, 2741
BseMI	GCAATG	5 cut(s)	1372, 1683, 2662, 2698, 2715
BseMII	CTCAG	3 cut(s)	972, 2226, 2234
BseNI	ACTGG	7 cut(s)	1081, 1907, 1958, 2005, 2379, 2633, 2746
BseRI	GAGGAG	4 cut(s)	2189, 2194, 2264, 2629
BseSI	GKGCMC	2 cut(s)	398, 2723
BseXI	GCAGC	6 cut(s)	40, 199, 202, 607, 949, 1430
BseYI	CCCAGC	1 cut(s)	156
BsgI	GTGCAG	1 cut(s)	1836
Bsh1236I	CGCG	1 cut(s)	174
Bsh1285I	CGRYCG	2 cut(s)	220, 2797
BshFI	GGCC	5 cut(s)	155, 345, 2168, 2384, 2721
BshNI	GGYRCC	1 cut(s)	62
BshVI	ATCGAT	2 cut(s)	216, 2793
BsiEI	CGRYCG	2 cut(s)	220, 2797
BsiHKAI	GWGCWC	1 cut(s)	45
BsiSI	CCGG	7 cut(s)	52, 60, 89, 147, 236, 332, 1225
BsiWI	CGTACG	1 cut(s)	225
BslFI	GGGAC	4 cut(s)	34, 191, 990, 2431
BslI	CCNNNNNNNGG	6 cut(s)	275, 276, 1016, 1138, 2431, 2741
BsmAI	GTCTC	3 cut(s)	665, 1556, 1667
BsmBI	CGTCTC	1 cut(s)	1667
BsmFI	GGGAC	4 cut(s)	34, 191, 990, 2431
BsmI	GAATGC	1 cut(s)	1252
BsnI	GGCC	5 cut(s)	155, 345, 2168, 2384, 2721
Bso31I	GGTCTC	1 cut(s)	665
Bsp120I	GGGCCC	1 cut(s)	2719
Bsp1286I	GDGCHC	3 cut(s)	45, 398, 2723
Bsp1720I	GCTNAGC	1 cut(s)	2235
Bsp68I	TCGCGA	1 cut(s)	174
BspANI	GGCC	5 cut(s)	155, 345, 2168, 2384, 2721
BspCNI	CTCAG	3 cut(s)	971, 2227, 2233
BspDI	ATCGAT	2 cut(s)	216, 2793
BspFNI	CGCG	1 cut(s)	174
BspHI	TCATGA	3 cut(s)	1486, 1660, 2440
BspLI	GGNNCC	8 cut(s)	19, 50, 64, 240, 1351, 2117, 2720, 2721
BspMAI	CTGCAG	1 cut(s)	2811
BspMI	ACCTGC	2 cut(s)	887, 2527
BspOI	GCTAGC	1 cut(s)	2198
BspPI	GGATC	6 cut(s)	935, 1035, 2468, 2582, 2658, 2798
BspQI	GCTCTTC	1 cut(s)	2205
BspT107I	GGYRCC	1 cut(s)	62
BspTI	CTTAAG	1 cut(s)	2576
BspTNI	GGTCTC	1 cut(s)	665
BsrBI	CCGCTC	1 cut(s)	752
BsrDI	GCAATG	5 cut(s)	1372, 1683, 2662, 2698, 2715
BsrFI	RCCGGY	1 cut(s)	235
BsrI	ACTGG	7 cut(s)	1081, 1907, 1958, 2005, 2379, 2633, 2746
BssAI	RCCGGY	1 cut(s)	235
BssECI	CCNNGG	2 cut(s)	21, 270
BssNI	GRCGYC	3 cut(s)	63, 93, 177
BssT1I	CCWWGG	2 cut(s)	21, 270
Bst4CI	ACNGT	9 cut(s)	230, 384, 473, 843, 914, 1273, 1919, 2041, 2784
Bst6I	CTCTTC	6 cut(s)	1167, 1194, 1554, 1641, 2205, 2241
BstACI	GRCGYC	3 cut(s)	63, 93, 177
BstAFI	CTTAAG	1 cut(s)	2576
BstAPI	GCANNNNNTGC	2 cut(s)	434, 2671
BstC8I	GCNNGC	4 cut(s)	237, 2134, 2196, 2672
BstDEI	CTNAG	5 cut(s)	123, 958, 1970, 2220, 2235
BstF5I	GGATG	7 cut(s)	730, 754, 866, 1912, 2332, 2383, 2482
BstFNI	CGCG	1 cut(s)	174
BstH2I	RGCGCY	2 cut(s)	66, 196
BstHHI	GCGC	2 cut(s)	65, 195
BstMAI	GTCTC	3 cut(s)	665, 1556, 1667
BstMCI	CGRYCG	2 cut(s)	220, 2797
BstMWI	GCNNNNNNNGC	9 cut(s)	40, 152, 307, 434, 443, 2191, 2204, 2560, 2671
BstNSI	RCATGY	4 cut(s)	893, 1478, 2674, 2698
BstSCI	CCNGG	2 cut(s)	50, 146
BstSFI	CTRYAG	2 cut(s)	2040, 2807
BstSLI	GKGCMC	2 cut(s)	398, 2723
BstUI	CGCG	1 cut(s)	174
BstV1I	GCAGC	6 cut(s)	40, 199, 202, 607, 949, 1430
BstV2I	GAAGAC	1 cut(s)	155
BstX2I	RGATCY	1 cut(s)	1027
BstYI	RGATCY	1 cut(s)	1027
Bsu15I	ATCGAT	2 cut(s)	216, 2793
Bsu36I	CCTNAGG	1 cut(s)	123
BsuRI	GGCC	5 cut(s)	155, 345, 2168, 2384, 2721
BsuTUI	ATCGAT	2 cut(s)	216, 2793
BtgZI	GCGATG	1 cut(s)	2651
BtrI	CACGTC	1 cut(s)	205
BtsCI	GGATG	7 cut(s)	730, 754, 866, 1912, 2332, 2383, 2482
BtsIMutI	CAGTG	3 cut(s)	839, 1998, 2037
BtuMI	TCGCGA	1 cut(s)	174
BveI	ACCTGC	2 cut(s)	887, 2527
Cac8I	GCNNGC	4 cut(s)	237, 2134, 2196, 2672
CaiI	CAGNNNCTG	1 cut(s)	2806
CciI	TCATGA	3 cut(s)	1486, 1660, 2440
CfoI	GCGC	2 cut(s)	65, 195
Cfr10I	RCCGGY	1 cut(s)	235
Cfr13I	GGNCC	6 cut(s)	48, 154, 263, 344, 2719, 2720
ClaI	ATCGAT	2 cut(s)	216, 2793
CseI	GACGC	3 cut(s)	101, 149, 2138
Csp6I	GTAC	3 cut(s)	226, 380, 2573
CviQI	GTAC	3 cut(s)	226, 380, 2573
DdeI	CTNAG	5 cut(s)	123, 958, 1970, 2220, 2235
DinI	GGCGCC	1 cut(s)	64
DraI	TTTAAA	1 cut(s)	565
DrdI	GACNNNNNNGTC	1 cut(s)	1076
DseDI	GACNNNNNNGTC	1 cut(s)	1076
EaeI	YGGCCR	1 cut(s)	2166
Eam1104I	CTCTTC	6 cut(s)	1167, 1194, 1554, 1641, 2205, 2241
EarI	CTCTTC	6 cut(s)	1167, 1194, 1554, 1641, 2205, 2241
Eco130I	CCWWGG	2 cut(s)	21, 270
Eco24I	GRGCYC	1 cut(s)	2723
Eco31I	GGTCTC	1 cut(s)	665
Eco32I	GATATC	1 cut(s)	406
Eco47I	GGWCC	2 cut(s)	48, 263
Eco57I	CTGAAG	8 cut(s)	1148, 1293, 1377, 1578, 1587, 1623, 2265, 2289
Eco81I	CCTNAGG	1 cut(s)	123
EcoO109I	RGGNCCY	3 cut(s)	48, 2719, 2720
EcoRI	GAATTC	1 cut(s)	494
EcoRV	GATATC	1 cut(s)	406
EcoT14I	CCWWGG	2 cut(s)	21, 270
EcoT22I	ATGCAT	3 cut(s)	1435, 2700, 2835
EcoT38I	GRGCYC	1 cut(s)	2723
EgeI	GGCGCC	1 cut(s)	64
EheI	GGCGCC	1 cut(s)	64
ErhI	CCWWGG	2 cut(s)	21, 270
Esp3I	CGTCTC	1 cut(s)	1667
FalI	AAGNNNNNCTT	2 cut(s)	2238, 2270
FaqI	GGGAC	4 cut(s)	34, 191, 990, 2431
FauI	CCCGC	2 cut(s)	369, 849
FbaI	TGATCA	2 cut(s)	1531, 1657
FokI	GGATG	7 cut(s)	717, 741, 873, 1919, 2339, 2390, 2469
FriOI	GRGCYC	1 cut(s)	2723
FspBI	CTAG	4 cut(s)	1281, 1788, 2195, 2393
GlaI	GCGC	2 cut(s)	64, 194
GsaI	CCCAGC	1 cut(s)	160
GsuI	CTGGAG	1 cut(s)	2453
HaeII	RGCGCY	2 cut(s)	66, 196
HaeIII	GGCC	5 cut(s)	155, 345, 2168, 2384, 2721
HapII	CCGG	7 cut(s)	52, 60, 89, 147, 236, 332, 1225
HgaI	GACGC	3 cut(s)	101, 149, 2138
HhaI	GCGC	2 cut(s)	65, 195
Hin1I	GRCGYC	3 cut(s)	63, 93, 177
Hin6I	GCGC	2 cut(s)	63, 193
HinP1I	GCGC	2 cut(s)	63, 193
HindIII	AAGCTT	2 cut(s)	1967, 2016
HpaII	CCGG	7 cut(s)	52, 60, 89, 147, 236, 332, 1225
HphI	GGTGA	8 cut(s)	242, 542, 1118, 1355, 2015, 2087, 2111, 2525
Hpy99I	CGWCG	2 cut(s)	179, 182
HpyCH4III	ACNGT	9 cut(s)	230, 384, 473, 843, 914, 1273, 1919, 2041, 2784
HpyCH4IV	ACGT	6 cut(s)	177, 204, 685, 706, 1527, 1769
HpyF10VI	GCNNNNNNNGC	9 cut(s)	40, 152, 307, 434, 443, 2191, 2204, 2560, 2671
HpyF3I	CTNAG	5 cut(s)	123, 958, 1970, 2220, 2235
HpySE526I	ACGT	6 cut(s)	177, 204, 685, 706, 1527, 1769
Hsp92I	GRCGYC	3 cut(s)	63, 93, 177
HspAI	GCGC	2 cut(s)	63, 193
KasI	GGCGCC	1 cut(s)	62
KroI	GCCGGC	1 cut(s)	235
KroNI	GCCGGC	1 cut(s)	237
Ksp22I	TGATCA	2 cut(s)	1531, 1657
LguI	GCTCTTC	1 cut(s)	2205
LmnI	GCTCC	6 cut(s)	25, 40, 244, 635, 2231, 2251
Lsp1109I	GCAGC	6 cut(s)	40, 199, 202, 607, 949, 1430
LweI	GCATC	8 cut(s)	412, 1036, 1420, 1435, 1442, 2053, 2206, 2674
MaeI	CTAG	4 cut(s)	1281, 1788, 2195, 2393
MaeII	ACGT	6 cut(s)	177, 204, 685, 706, 1527, 1769
MaeIII	GTNAC	6 cut(s)	787, 835, 863, 1996, 2075, 2303
MbiI	CCGCTC	1 cut(s)	752
MflI	RGATCY	1 cut(s)	1027
MhlI	GDGCHC	3 cut(s)	45, 398, 2723
Mly113I	GGCGCC	1 cut(s)	63
MmeI	TCCRAC	2 cut(s)	2476, 2506
Mph1103I	ATGCAT	3 cut(s)	1435, 2700, 2835
MroNI	GCCGGC	1 cut(s)	235
MseI	TTAA	8 cut(s)	294, 564, 1212, 1455, 1737, 2546, 2577, 2676
MslI	CAYNNNNRTG	3 cut(s)	759, 1428, 2124
MspA1I	CMGCKG	5 cut(s)	15, 962, 1355, 1556, 1643
MspCI	CTTAAG	1 cut(s)	2576
MspI	CCGG	7 cut(s)	52, 60, 89, 147, 236, 332, 1225
MspR9I	CCNGG	2 cut(s)	52, 148
Mva1269I	GAATGC	1 cut(s)	1252
MvnI	CGCG	1 cut(s)	174
MwoI	GCNNNNNNNGC	9 cut(s)	40, 152, 307, 434, 443, 2191, 2204, 2560, 2671
NaeI	GCCGGC	1 cut(s)	237
NarI	GGCGCC	1 cut(s)	63
NciI	CCSGG	2 cut(s)	52, 148
NgoMIV	GCCGGC	1 cut(s)	235
NheI	GCTAGC	1 cut(s)	2194
NlaIV	GGNNCC	8 cut(s)	19, 50, 64, 240, 1351, 2117, 2720, 2721
NmeAIII	GCCGAG	1 cut(s)	97
NmuCI	GTSAC	5 cut(s)	787, 835, 1996, 2075, 2303
NruI	TCGCGA	1 cut(s)	174
NsiI	ATGCAT	3 cut(s)	1435, 2700, 2835
NspI	RCATGY	4 cut(s)	893, 1478, 2674, 2698
PaeI	GCATGC	1 cut(s)	2674
PagI	TCATGA	3 cut(s)	1486, 1660, 2440
PaqCI	CACCTGC	1 cut(s)	887
PciI	ACATGT	2 cut(s)	889, 1474
PciSI	GCTCTTC	1 cut(s)	2205
PctI	GAATGC	1 cut(s)	1252
PdiI	GCCGGC	1 cut(s)	237
Pfl23II	CGTACG	1 cut(s)	225
PflMI	CCANNNNNTGG	1 cut(s)	1138
Ple19I	CGATCG	2 cut(s)	220, 2797
PluTI	GGCGCC	1 cut(s)	66
PpuMI	RGGWCCY	1 cut(s)	48
PscI	ACATGT	2 cut(s)	889, 1474
PshBI	ATTAAT	1 cut(s)	1212
Psp5II	RGGWCCY	1 cut(s)	48
PspFI	CCCAGC	1 cut(s)	156
PspLI	CGTACG	1 cut(s)	225
PspN4I	GGNNCC	8 cut(s)	19, 50, 64, 240, 1351, 2117, 2720, 2721
PspOMI	GGGCCC	1 cut(s)	2719
PspPI	GGNCC	6 cut(s)	48, 154, 263, 344, 2719, 2720
PspPPI	RGGWCCY	1 cut(s)	48
PstI	CTGCAG	1 cut(s)	2811
PstNI	CAGNNNCTG	1 cut(s)	2806
PsuI	RGATCY	1 cut(s)	1027
PvuI	CGATCG	2 cut(s)	220, 2797
PvuII	CAGCTG	2 cut(s)	962, 1556
RruI	TCGCGA	1 cut(s)	174
RsaI	GTAC	3 cut(s)	227, 381, 2574
RsaNI	GTAC	3 cut(s)	226, 380, 2573
RseI	CAYNNNNRTG	3 cut(s)	759, 1428, 2124
SapI	GCTCTTC	1 cut(s)	2205
SaqAI	TTAA	8 cut(s)	294, 564, 1212, 1455, 1737, 2546, 2577, 2676
Sau96I	GGNCC	6 cut(s)	48, 154, 263, 344, 2719, 2720
ScaI	AGTACT	1 cut(s)	2574
ScrFI	CCNGG	2 cut(s)	52, 148
SduI	GDGCHC	3 cut(s)	45, 398, 2723
SfaNI	GCATC	8 cut(s)	412, 1036, 1420, 1435, 1442, 2053, 2206, 2674
SfcI	CTRYAG	2 cut(s)	2040, 2807
SfoI	GGCGCC	1 cut(s)	64
SinI	GGWCC	2 cut(s)	48, 263
SmiMI	CAYNNNNRTG	3 cut(s)	759, 1428, 2124
SmlI	CTYRAG	2 cut(s)	2576, 2818
SmoI	CTYRAG	2 cut(s)	2576, 2818
SphI	GCATGC	1 cut(s)	2674
SspDI	GGCGCC	1 cut(s)	62
SspI	AATATT	2 cut(s)	1178, 2468
SspMI	CTAG	4 cut(s)	1281, 1788, 2195, 2393
StyD4I	CCNGG	2 cut(s)	50, 146
StyI	CCWWGG	2 cut(s)	21, 270
TaaI	ACNGT	9 cut(s)	230, 384, 473, 843, 914, 1273, 1919, 2041, 2784
TaiI	ACGT	6 cut(s)	180, 207, 688, 709, 1530, 1772
TaqI	TCGA	9 cut(s)	180, 216, 340, 1244, 1911, 2012, 2367, 2793, 2797
TatI	WGTACW	1 cut(s)	2572
TauI	GCSGC	4 cut(s)	34, 198, 428, 2554
Tru1I	TTAA	8 cut(s)	294, 564, 1212, 1455, 1737, 2546, 2577, 2676
Tru9I	TTAA	8 cut(s)	294, 564, 1212, 1455, 1737, 2546, 2577, 2676
TscAI	CASTG	3 cut(s)	846, 2005, 2044
TseFI	GTSAC	5 cut(s)	787, 835, 1996, 2075, 2303
TseI	GCWGC	6 cut(s)	28, 187, 190, 595, 962, 1418
Tsp45I	GTSAC	5 cut(s)	787, 835, 1996, 2075, 2303
TspGWI	ACGGA	3 cut(s)	231, 477, 706
TspRI	CASTG	3 cut(s)	846, 2005, 2044
Van91I	CCANNNNNTGG	1 cut(s)	1138
Vha464I	CTTAAG	1 cut(s)	2576
VpaK11BI	GGWCC	2 cut(s)	48, 263
VspI	ATTAAT	1 cut(s)	1212
XapI	RAATTY	4 cut(s)	494, 690, 1925, 2761
XbaI	TCTAGA	1 cut(s)	1280
XceI	RCATGY	4 cut(s)	893, 1478, 2674, 2698
XspI	CTAG	4 cut(s)	1281, 1788, 2195, 2393
ZraI	GACGTC	1 cut(s)	178
ZrmI	AGTACT	1 cut(s)	2574
Zsp2I	ATGCAT	3 cut(s)	1435, 2700, 2835

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.