Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0000907

Physical Location & Seq

Genomic Coordinates Forward (+)

10132987 .. 10139359

Gene Structure 6373 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g10790.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1416 bp

ATGCTCAGAACGTTTGATGGAGCTGAGGCATCTGAAGAGGAGCTTGATACTAAACCTGAAGGCAAGTTTGGTCGAGACCAACCCAAAGAAAGTGACTACTTTGACAAGTTGAAGGATGAGATTGAACTTCGGAAGCAAATGAATATTGCTGAACTCAATGAACTGGATGAGGCCACCCAATTAGAAGTAGAGGGTTTTCGGACAGGGACATACCTACGGTTGGAGGTTCATGATGTCCCTTATGAGATGGTTGAATATTTTGATCCCTGTCATCCTATTTTGGTTGGAGGAATTGGTCTTGGTGAAGAAAATGTCGGACACATGCAGGTCAGGTTAAAGCGGCATAGGTGGCACAAGAAAGTACTTAAGAATAACGATCCCCTTTTTGTTTCTATTGGGTGGAGGAGATACCAAACAATACCAGTTTATGCTATTGAGGATCGCAATGGAAGGCATCGCATGCTTAAGTACACTCCTGAACACATGCATTGCCTGGCAATGTTTTGGGGCCCTCTTGCCCCTCCTAATACTGGTGTGGTTGCTTTCCAGAATTTATCAAACAATCAGGCACAATTTAGGATCGCACCAACTGCAGTTGTGCTTGAGTTCAACCATGCATCACGAATAGTGAAGAAACTCAAACTAGTTGGTCACCCCTGCAAGATTTTCAAGAACACTGCCCTTGTAAAGGATATGTTCACCTCGGATCTTGAAATAGCTCGATTTGAAGGTGCTGCTGTTCGAACTGTCAGTGGAATCCGGGGGCAGGTCAAAAAGGCTGCGAAAGAAGAAATTGGTAACCAACCAAAAAAGATGGGTGGACAACCAAAAGAAGGGATTGCTAGGTGCACCTTTGAGGACAAAATTAAGATGAGTGACATTGTTTTTTTGCGTGCTTGGACTCAAGTTGAAGTTCCTCGATTTTACAACCCATTGACGACGTCCCTGCAACCTCGCGACAAGACCTGGCAAGGGATGAAAACTACTACTGAATTGAGGAGAGAACATAATATTCCTATTCCTGTCAATAAGGATTCACTTTACAAGAAAATTGAAAGGAAGTTGAAGAAGTTCAATCCGTTGGTGATTCCCAAGTCACTGCAAGCTGTGCTGCCATTCGGAACAAAGCCTAAGGATATTCCCAGTAGGAAAAGGCCACTTCTTGAAAACAGAAGAGCTGTTGTCATGGAGCCTCACGAACGTAAAGTTCATACTCTTGTTCAGCATCTCGGATTAATACGAAACGAGAAGATGAAGAAGCGCAAGCTAAAAGATGATAAAAAGAGGAAAGAAATTGAAGTCCAGAAAGTCAAAGAAGAACAAGTGTCTAAAAAGCGCCAGAGGGAAGAACGACGGGAGAGATACCGGGCACAAGATAAAATGAAGAAGAAAATTAGGAGAAGCGCAGAGGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000462 GO:0000469 GO:0000478 GO:0000479 GO:0001882 GO:0001883 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0003924 GO:0005488 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0030686 GO:0031974 GO:0031981 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0032991 GO:0034470 GO:0034511 GO:0034641 GO:0034660 GO:0035639 GO:0036094 GO:0042254 GO:0042274 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0097367 GO:1901265 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

AARP2CN RIBIOP_C

Protein Analysis

472

Amino Acids

55.02

Weight (kDa)

9.81

Isoelectric Point (pI)

47.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000907)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06720 AT1G06720 AT1G06720
fragaria_vesca	FvH4_4g10660
malus_domestica	MD00G1071300.v1.1 MD00G1152200.v1.1 MD03G1154000.v1.1
prunus_persica	Prupe.1G548200_v2.0.a1 Prupe.8G069100_v2.0.a1 Prupe.8G069100_v2.0.a1
pyrus_communis	pycom03g10780 pycom03g10790 pycom07g03680 pycom11g14630 pycom11g14640
rosa_chinensis	RchiOBHm_Chr2g0114561 RchiOBHm_Chr2g0114571 RchiOBHm_Chr4g0406311 RchiOBHm_Chr5g0051051
rosa_laevigata	RLG00000008777 RLG00000018114 RLG00000034749
rosa_multiflora	Rmu_co8051646.1_g000001 Rmu_sc0000370.1_g000003 Rmu_sc0000371.1_g000013 Rmu_sc0000446.1_g000025 Rmu_sc0000898.1_g000055 Rmu_sc0001520.1_g000010 Rmu_sc0003452.1_g000005 Rmu_sc0030223.1_g000001
rosa_roxburghii	Rroxscaffold_1G00029430 Rroxscaffold_2G00130290 Rroxscaffold_3G00239130 Rroxscaffold_3G00239160
rosa_rugosa	Rorug04G0068100 Rorug04G0068200 Rorug04G0068300 Rorug05G0265700 Rorug07G0181200 Rorug07G0181300 Rorug07G0181400 Rorug07G0181500 Rorug07G0181500 Rorug07G0181600 Rorug07G0181800
rosa_samantha	Rh2AG248700 Rh2BG258300 Rh2BG258500 Rh2CG252100 Rh2CG252200 Rh2CG252500 Rh2DG256800 Rh4AG137200 Rh4BG134800 Rh4CG145400 Rh4DG131800 Rh5AG337900 Rh5BG347600 Rh5CG375000 Rh5DG360700
rosa_wichuraiana	Rw0G006840 Rw0G023620 Rw2G019340 Rw4G011120 Rw5G031930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	944
Acc36I	ACCTGC	2 cut(s)	316, 757
AccII	CGCG	1 cut(s)	957
AciI	CCGC	1 cut(s)	340
AclI	AACGTT	1 cut(s)	11
AclWI	GGATC	5 cut(s)	257, 371, 447, 587, 714
AcsI	RAATTY	1 cut(s)	550
AcuI	CTGAAG	2 cut(s)	54, 78
AcyI	GRCGYC	1 cut(s)	941
AfaI	GTAC	2 cut(s)	363, 470
AfiI	CCNNNNNNNGG	6 cut(s)	220, 530, 688, 766, 833, 972
AflII	CTTAAG	2 cut(s)	365, 464
AhlI	ACTAGT	1 cut(s)	643
AjnI	CCWGG	2 cut(s)	492, 965
AjuI	GAANNNNNNNTTGG	2 cut(s)	51, 83
AluBI	AGCT	6 cut(s)	23, 43, 719, 1106, 1178, 1267
AluI	AGCT	6 cut(s)	23, 43, 719, 1106, 1178, 1267
Alw21I	GWGCWC	1 cut(s)	851
Alw26I	GTCTC	1 cut(s)	69
Alw44I	GTGCAC	1 cut(s)	847
AlwI	GGATC	5 cut(s)	257, 371, 447, 587, 714
AoxI	GGCC	3 cut(s)	171, 508, 1154
ApaI	GGGCCC	1 cut(s)	512
ApaLI	GTGCAC	1 cut(s)	847
ApeKI	GCWGC	3 cut(s)	734, 779, 1111
ApoI	RAATTY	1 cut(s)	550
AseI	ATTAAT	1 cut(s)	1235
Asp700I	GAANNNNTTC	1 cut(s)	1070
AspLEI	GCGC	3 cut(s)	1263, 1338, 1406
AspS9I	GGNCC	2 cut(s)	508, 509
AsuC2I	CCSGG	2 cut(s)	761, 1367
AsuHPI	GGTGA	4 cut(s)	314, 644, 691, 1096
AsuII	TTCGAA	1 cut(s)	742
AxyI	CCTNAGG	1 cut(s)	1131
BaeGI	GKGCMC	3 cut(s)	512, 851, 1372
BanII	GRGCYC	1 cut(s)	512
Bbv12I	GWGCWC	1 cut(s)	851
BbvCI	CCTCAGC	1 cut(s)	24
BbvI	GCAGC	3 cut(s)	721, 766, 1098
BccI	CCATC	3 cut(s)	11, 241, 808
BcgI	CGANNNNNNTGC	2 cut(s)	928, 962
BciT130I	CCWGG	2 cut(s)	494, 967
BcnI	CCSGG	2 cut(s)	761, 1367
BcoDI	GTCTC	1 cut(s)	69
BcuI	ACTAGT	1 cut(s)	643
BfaI	CTAG	2 cut(s)	644, 843
BfmI	CTRYAG	1 cut(s)	591
BfoI	RGCGCY	1 cut(s)	1339
BfrI	CTTAAG	2 cut(s)	365, 464
BfuAI	ACCTGC	2 cut(s)	316, 757
BisI	GCNGC	4 cut(s)	341, 735, 780, 1112
BlsI	GCNGC	4 cut(s)	342, 736, 781, 1113
BmcAI	AGTACT	1 cut(s)	363
Bme1390I	CCNGG	4 cut(s)	494, 761, 967, 1367
BmgT120I	GGNCC	2 cut(s)	508, 509
BmiI	GGNNCC	3 cut(s)	509, 510, 1191
BmrFI	CCNGG	4 cut(s)	494, 761, 967, 1367
BmrI	ACTGGG	1 cut(s)	1137
BmsI	GCATC	4 cut(s)	38, 463, 626, 1234
BmuI	ACTGGG	1 cut(s)	1137
Bpu10I	CCTNAGC	1 cut(s)	24
Bpu14I	TTCGAA	1 cut(s)	742
BpuEI	CTTGAG	2 cut(s)	623, 888
BpuMI	CCSGG	2 cut(s)	761, 1367
BsaHI	GRCGYC	1 cut(s)	941
BsaI	GGTCTC	1 cut(s)	69
BsaJI	CCNNGG	2 cut(s)	702, 760
Bsc4I	CCNNNNNNNGG	6 cut(s)	220, 530, 688, 766, 833, 972
Bse1I	ACTGG	4 cut(s)	168, 422, 535, 1143
Bse21I	CCTNAGG	1 cut(s)	1131
Bse3DI	GCAATG	3 cut(s)	451, 487, 504
BseBI	CCWGG	2 cut(s)	494, 967
BseDI	CCNNGG	2 cut(s)	702, 760
BseGI	GGATG	4 cut(s)	121, 172, 271, 981
BseLI	CCNNNNNNNGG	6 cut(s)	220, 530, 688, 766, 833, 972
BseMI	GCAATG	3 cut(s)	451, 487, 504
BseMII	CTCAG	2 cut(s)	15, 19
BseNI	ACTGG	4 cut(s)	168, 422, 535, 1143
BseRI	GAGGAG	3 cut(s)	53, 418, 1012
BseSI	GKGCMC	3 cut(s)	512, 851, 1372
BseXI	GCAGC	3 cut(s)	721, 766, 1098
Bsh1236I	CGCG	1 cut(s)	957
BshFI	GGCC	3 cut(s)	173, 510, 1156
BsiHKAI	GWGCWC	1 cut(s)	851
BsiSI	CCGG	2 cut(s)	760, 1366
BslFI	GGGAC	3 cut(s)	220, 221, 928
BslI	CCNNNNNNNGG	6 cut(s)	220, 530, 688, 766, 833, 972
BsmAI	GTCTC	1 cut(s)	69
BsmFI	GGGAC	3 cut(s)	220, 221, 928
BsnI	GGCC	3 cut(s)	173, 510, 1156
Bso31I	GGTCTC	1 cut(s)	69
Bsp119I	TTCGAA	1 cut(s)	742
Bsp120I	GGGCCC	1 cut(s)	508
Bsp1286I	GDGCHC	3 cut(s)	512, 851, 1372
Bsp143I	GATC	5 cut(s)	262, 376, 439, 579, 706
Bsp68I	TCGCGA	1 cut(s)	957
BspACI	CCGC	1 cut(s)	340
BspANI	GGCC	3 cut(s)	173, 510, 1156
BspCNI	CTCAG	2 cut(s)	16, 18
BspFNI	CGCG	1 cut(s)	957
BspHI	TCATGA	1 cut(s)	229
BspLI	GGNNCC	3 cut(s)	509, 510, 1191
BspMAI	CTGCAG	1 cut(s)	595
BspMI	ACCTGC	2 cut(s)	316, 757
BspPI	GGATC	5 cut(s)	257, 371, 447, 587, 714
BspQI	GCTCTTC	1 cut(s)	1168
BspT104I	TTCGAA	1 cut(s)	742
BspTI	CTTAAG	2 cut(s)	365, 464
BspTNI	GGTCTC	1 cut(s)	69
BsrDI	GCAATG	3 cut(s)	451, 487, 504
BsrI	ACTGG	4 cut(s)	168, 422, 535, 1143
BssECI	CCNNGG	2 cut(s)	702, 760
BssMI	GATC	5 cut(s)	262, 376, 439, 579, 706
BssNI	GRCGYC	1 cut(s)	941
Bst2UI	CCWGG	2 cut(s)	494, 967
Bst4CI	ACNGT	2 cut(s)	219, 748
Bst6I	CTCTTC	2 cut(s)	30, 1168
BstACI	GRCGYC	1 cut(s)	941
BstAFI	CTTAAG	2 cut(s)	365, 464
BstAPI	GCANNNNNTGC	3 cut(s)	460, 590, 1108
BstBI	TTCGAA	1 cut(s)	742
BstC8I	GCNNGC	4 cut(s)	461, 894, 1104, 1265
BstDEI	CTNAG	3 cut(s)	5, 24, 1131
BstEII	GGTNACC	2 cut(s)	650, 797
BstENI	CCTNNNNNAGG	1 cut(s)	686
BstF5I	GGATG	4 cut(s)	121, 172, 271, 981
BstFNI	CGCG	1 cut(s)	957
BstH2I	RGCGCY	1 cut(s)	1339
BstHHI	GCGC	3 cut(s)	1263, 1338, 1406
BstKTI	GATC	5 cut(s)	265, 379, 442, 582, 709
BstMAI	GTCTC	1 cut(s)	69
BstMBI	GATC	5 cut(s)	262, 376, 439, 579, 706
BstMWI	GCNNNNNNNGC	4 cut(s)	349, 460, 590, 1108
BstNI	CCWGG	2 cut(s)	494, 967
BstNSI	RCATGY	3 cut(s)	325, 463, 487
BstPI	GGTNACC	2 cut(s)	650, 797
BstSCI	CCNGG	4 cut(s)	492, 759, 965, 1365
BstSFI	CTRYAG	1 cut(s)	591
BstSLI	GKGCMC	3 cut(s)	512, 851, 1372
BstUI	CGCG	1 cut(s)	957
BstV1I	GCAGC	3 cut(s)	721, 766, 1098
BstX2I	RGATCY	1 cut(s)	706
BstYI	RGATCY	1 cut(s)	706
Bsu36I	CCTNAGG	1 cut(s)	1131
BsuRI	GGCC	3 cut(s)	173, 510, 1156
BtgZI	GCGATG	1 cut(s)	440
BtsCI	GGATG	4 cut(s)	121, 172, 271, 981
BtsI	GCAGTG	2 cut(s)	675, 1097
BtsIMutI	CAGTG	3 cut(s)	675, 757, 1097
BtuMI	TCGCGA	1 cut(s)	957
BveI	ACCTGC	2 cut(s)	316, 757
Cac8I	GCNNGC	4 cut(s)	461, 894, 1104, 1265
CciI	TCATGA	1 cut(s)	229
CfoI	GCGC	3 cut(s)	1263, 1338, 1406
Cfr13I	GGNCC	2 cut(s)	508, 509
Csp6I	GTAC	2 cut(s)	362, 469
CviAII	CATG	6 cut(s)	230, 322, 460, 484, 614, 1186
CviQI	GTAC	2 cut(s)	362, 469
DdeI	CTNAG	3 cut(s)	5, 24, 1131
DpnI	GATC	5 cut(s)	264, 378, 441, 581, 708
DpnII	GATC	5 cut(s)	262, 376, 439, 579, 706
Eam1104I	CTCTTC	2 cut(s)	30, 1168
EarI	CTCTTC	2 cut(s)	30, 1168
Eco24I	GRGCYC	1 cut(s)	512
Eco31I	GGTCTC	1 cut(s)	69
Eco57I	CTGAAG	2 cut(s)	54, 78
Eco81I	CCTNAGG	1 cut(s)	1131
Eco91I	GGTNACC	2 cut(s)	650, 797
EcoNI	CCTNNNNNAGG	1 cut(s)	686
EcoO109I	RGGNCCY	2 cut(s)	508, 509
EcoO65I	GGTNACC	2 cut(s)	650, 797
EcoRII	CCWGG	2 cut(s)	492, 965
EcoT22I	ATGCAT	2 cut(s)	489, 619
EcoT38I	GRGCYC	1 cut(s)	512
FaeI	CATG	6 cut(s)	233, 325, 463, 487, 617, 1189
FalI	AAGNNNNNCTT	2 cut(s)	27, 59
FaqI	GGGAC	3 cut(s)	220, 221, 928
FatI	CATG	6 cut(s)	229, 321, 459, 483, 613, 1185
Fnu4HI	GCNGC	4 cut(s)	341, 735, 780, 1112
FokI	GGATG	4 cut(s)	128, 179, 258, 988
FriOI	GRGCYC	1 cut(s)	512
Fsp4HI	GCNGC	4 cut(s)	341, 735, 780, 1112
FspBI	CTAG	2 cut(s)	644, 843
GlaI	GCGC	3 cut(s)	1262, 1337, 1405
GluI	GCNGC	4 cut(s)	341, 735, 780, 1112
HaeII	RGCGCY	1 cut(s)	1339
HaeIII	GGCC	3 cut(s)	173, 510, 1156
HapII	CCGG	2 cut(s)	760, 1366
HhaI	GCGC	3 cut(s)	1263, 1338, 1406
Hin1I	GRCGYC	1 cut(s)	941
Hin1II	CATG	6 cut(s)	233, 325, 463, 487, 617, 1189
Hin6I	GCGC	3 cut(s)	1261, 1336, 1404
HinP1I	GCGC	3 cut(s)	1261, 1336, 1404
HinfI	GANTC	4 cut(s)	756, 901, 1034, 1087
HpaII	CCGG	2 cut(s)	760, 1366
HphI	GGTGA	4 cut(s)	314, 644, 691, 1096
Hpy166II	GTNNAC	4 cut(s)	471, 699, 821, 849
Hpy188I	TCNGA	8 cut(s)	8, 34, 132, 201, 317, 706, 1121, 1232
Hpy8I	GTNNAC	4 cut(s)	471, 699, 821, 849
Hpy99I	CGWCG	2 cut(s)	943, 1356
HpyAV	CCTTC	5 cut(s)	53, 106, 444, 722, 827
HpyCH4III	ACNGT	2 cut(s)	219, 748
HpyCH4IV	ACGT	3 cut(s)	11, 941, 1201
HpyCH4V	TGCA	8 cut(s)	325, 487, 593, 617, 660, 849, 949, 1102
HpyF10VI	GCNNNNNNNGC	4 cut(s)	349, 460, 590, 1108
HpyF3I	CTNAG	3 cut(s)	5, 24, 1131
HpySE526I	ACGT	3 cut(s)	11, 941, 1201
Hsp92I	GRCGYC	1 cut(s)	941
Hsp92II	CATG	6 cut(s)	233, 325, 463, 487, 617, 1189
HspAI	GCGC	3 cut(s)	1261, 1336, 1404
Kzo9I	GATC	5 cut(s)	262, 376, 439, 579, 706
LguI	GCTCTTC	1 cut(s)	1168
LmnI	GCTCC	3 cut(s)	20, 40, 1189
Lsp1109I	GCAGC	3 cut(s)	721, 766, 1098
LweI	GCATC	4 cut(s)	38, 463, 626, 1234
MaeI	CTAG	2 cut(s)	644, 843
MaeII	ACGT	3 cut(s)	11, 941, 1201
MaeIII	GTNAC	5 cut(s)	92, 650, 797, 875, 1095
MalI	GATC	5 cut(s)	264, 378, 441, 581, 708
MboI	GATC	5 cut(s)	262, 376, 439, 579, 706
MflI	RGATCY	1 cut(s)	706
MhlI	GDGCHC	3 cut(s)	512, 851, 1372
MlyI	GAGTC	1 cut(s)	895
MmeI	TCCRAC	3 cut(s)	201, 265, 295
Mph1103I	ATGCAT	2 cut(s)	489, 619
MroXI	GAANNNNTTC	1 cut(s)	1070
MseI	TTAA	5 cut(s)	335, 366, 465, 867, 1235
MspCI	CTTAAG	2 cut(s)	365, 464
MspI	CCGG	2 cut(s)	760, 1366
MspR9I	CCNGG	4 cut(s)	494, 761, 967, 1367
MvaI	CCWGG	2 cut(s)	494, 967
MvnI	CGCG	1 cut(s)	957
MwoI	GCNNNNNNNGC	4 cut(s)	349, 460, 590, 1108
NciI	CCSGG	2 cut(s)	761, 1367
NdeII	GATC	5 cut(s)	262, 376, 439, 579, 706
NlaIII	CATG	6 cut(s)	233, 325, 463, 487, 617, 1189
NlaIV	GGNNCC	3 cut(s)	509, 510, 1191
NmuCI	GTSAC	4 cut(s)	92, 650, 875, 1095
NruI	TCGCGA	1 cut(s)	957
NsiI	ATGCAT	2 cut(s)	489, 619
NspI	RCATGY	3 cut(s)	325, 463, 487
NspV	TTCGAA	1 cut(s)	742
PaeI	GCATGC	1 cut(s)	463
PagI	TCATGA	1 cut(s)	229
PciSI	GCTCTTC	1 cut(s)	1168
PdmI	GAANNNNTTC	1 cut(s)	1070
PfeI	GAWTC	3 cut(s)	756, 1034, 1087
PflFI	GACNNNGTC	1 cut(s)	940
PkrI	GCNGC	4 cut(s)	342, 736, 781, 1113
PleI	GAGTC	1 cut(s)	895
PpsI	GAGTC	1 cut(s)	895
PshBI	ATTAAT	1 cut(s)	1235
Psp1406I	AACGTT	1 cut(s)	11
Psp6I	CCWGG	2 cut(s)	492, 965
PspEI	GGTNACC	2 cut(s)	650, 797
PspGI	CCWGG	2 cut(s)	492, 965
PspN4I	GGNNCC	3 cut(s)	509, 510, 1191
PspOMI	GGGCCC	1 cut(s)	508
PspPI	GGNCC	2 cut(s)	508, 509
PstI	CTGCAG	1 cut(s)	595
PsuI	RGATCY	1 cut(s)	706
PsyI	GACNNNGTC	1 cut(s)	940
RruI	TCGCGA	1 cut(s)	957
RsaI	GTAC	2 cut(s)	363, 470
RsaNI	GTAC	2 cut(s)	362, 469
SapI	GCTCTTC	1 cut(s)	1168
SaqAI	TTAA	5 cut(s)	335, 366, 465, 867, 1235
SatI	GCNGC	4 cut(s)	341, 735, 780, 1112
Sau3AI	GATC	5 cut(s)	262, 376, 439, 579, 706
Sau96I	GGNCC	2 cut(s)	508, 509
ScaI	AGTACT	1 cut(s)	363
SchI	GAGTC	1 cut(s)	895
ScrFI	CCNGG	4 cut(s)	494, 761, 967, 1367
SduI	GDGCHC	3 cut(s)	512, 851, 1372
SfaNI	GCATC	4 cut(s)	38, 463, 626, 1234
SfcI	CTRYAG	1 cut(s)	591
SfuI	TTCGAA	1 cut(s)	742
SmlI	CTYRAG	4 cut(s)	365, 464, 602, 903
SmoI	CTYRAG	4 cut(s)	365, 464, 602, 903
SpeI	ACTAGT	1 cut(s)	643
SphI	GCATGC	1 cut(s)	463
SsiI	CCGC	1 cut(s)	340
SspI	AATATT	3 cut(s)	145, 257, 1012
SspMI	CTAG	2 cut(s)	644, 843
StyD4I	CCNGG	4 cut(s)	492, 759, 965, 1365
TaaI	ACNGT	2 cut(s)	219, 748
TaiI	ACGT	3 cut(s)	14, 944, 1204
TaqI	TCGA	4 cut(s)	73, 721, 742, 919
TatI	WGTACW	2 cut(s)	361, 468
TauI	GCSGC	1 cut(s)	343
TfiI	GAWTC	3 cut(s)	756, 1034, 1087
Tru1I	TTAA	5 cut(s)	335, 366, 465, 867, 1235
Tru9I	TTAA	5 cut(s)	335, 366, 465, 867, 1235
TscAI	CASTG	3 cut(s)	682, 757, 1104
TseFI	GTSAC	4 cut(s)	92, 650, 875, 1095
TseI	GCWGC	3 cut(s)	734, 779, 1111
Tsp45I	GTSAC	4 cut(s)	92, 650, 875, 1095
TspDTI	ATGAA	7 cut(s)	155, 174, 218, 992, 1199, 1268, 1397
TspGWI	ACGGA	1 cut(s)	1068
TspRI	CASTG	3 cut(s)	682, 757, 1104
Tth111I	GACNNNGTC	1 cut(s)	940
Vha464I	CTTAAG	2 cut(s)	365, 464
VneI	GTGCAC	1 cut(s)	847
VspI	ATTAAT	1 cut(s)	1235
XagI	CCTNNNNNAGG	1 cut(s)	686
XapI	RAATTY	1 cut(s)	550
XceI	RCATGY	3 cut(s)	325, 463, 487
XmnI	GAANNNNTTC	1 cut(s)	1070
XspI	CTAG	2 cut(s)	644, 843
ZraI	GACGTC	1 cut(s)	942
ZrmI	AGTACT	1 cut(s)	363
Zsp2I	ATGCAT	2 cut(s)	489, 619

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.