ribosome biogenesis protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2419 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 812 |
| Acc36I | ACCTGC | 1 cut(s) | 2419 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 191 |
| AccBSI | CCGCTC | 1 cut(s) | 1786 |
| AccI | GTMKAC | 1 cut(s) | 1554 |
| AccII | CGCG | 1 cut(s) | 2576 |
| AciI | CCGC | 7 cut(s) | 135, 679, 785, 837, 1786, 2320, 2686 |
| AclWI | GGATC | 5 cut(s) | 590, 1126, 1919, 2033, 2249 |
| AcoI | YGGCCR | 2 cut(s) | 1773, 1870 |
| AcsI | RAATTY | 6 cut(s) | 397, 514, 877, 1579, 1841, 2212 |
| AcuI | CTGAAG | 4 cut(s) | 461, 878, 1296, 2048 |
| AfaI | GTAC | 2 cut(s) | 821, 2132 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 191, 752, 2192, 2428 |
| AflII | CTTAAG | 1 cut(s) | 2126 |
| AflIII | ACRYGT | 2 cut(s) | 826, 2355 |
| AgeI | ACCGGT | 1 cut(s) | 96 |
| AhlI | ACTAGT | 3 cut(s) | 1001, 2033, 2837 |
| AjnI | CCWGG | 3 cut(s) | 44, 498, 2765 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1370, 1402, 1959, 1991 |
| AleI | CACNNNNGTG | 1 cut(s) | 277 |
| Alw21I | GWGCWC | 3 cut(s) | 902, 2265, 2507 |
| Alw26I | GTCTC | 2 cut(s) | 2059, 2346 |
| Alw44I | GTGCAC | 1 cut(s) | 2503 |
| AlwI | GGATC | 5 cut(s) | 590, 1126, 1919, 2033, 2249 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 439, 2252 |
| Ama87I | CYCGRG | 1 cut(s) | 2264 |
| AoxI | GGCC | 7 cut(s) | 42, 262, 496, 1773, 1870, 2170, 2777 |
| ApaI | GGGCCC | 1 cut(s) | 2174 |
| ApaLI | GTGCAC | 1 cut(s) | 2503 |
| ApeKI | GCWGC | 6 cut(s) | 331, 433, 1079, 1655, 2231, 2246 |
| ApoI | RAATTY | 6 cut(s) | 397, 514, 877, 1579, 1841, 2212 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 771, 803 |
| AseI | ATTAAT | 1 cut(s) | 942 |
| AsiGI | ACCGGT | 1 cut(s) | 96 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1488 |
| AspLEI | GCGC | 3 cut(s) | 1463, 2886, 2961 |
| AspS9I | GGNCC | 6 cut(s) | 42, 56, 179, 263, 2170, 2171 |
| AsuC2I | CCSGG | 1 cut(s) | 2423 |
| AsuHPI | GGTGA | 6 cut(s) | 379, 1652, 1721, 1745, 2443, 2719 |
| AvaI | CYCGRG | 1 cut(s) | 2264 |
| AvaII | GGWCC | 2 cut(s) | 56, 179 |
| AxyI | CCTNAGG | 1 cut(s) | 60 |
| BaeGI | GKGCMC | 3 cut(s) | 305, 2174, 2507 |
| BalI | TGGCCA | 1 cut(s) | 1775 |
| BanII | GRGCYC | 1 cut(s) | 2174 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 876, 908, 2818, 2850 |
| BauI | CACGAG | 1 cut(s) | 2817 |
| BbsI | GAAGAC | 3 cut(s) | 1302, 2036, 2342 |
| Bbv12I | GWGCWC | 3 cut(s) | 902, 2265, 2507 |
| BbvI | GCAGC | 6 cut(s) | 343, 445, 1066, 1642, 2243, 2258 |
| BccI | CCATC | 9 cut(s) | 351, 464, 1118, 1472, 1903, 1941, 2004, 2464, 2788 |
| BceAI | ACGGC | 1 cut(s) | 2018 |
| BciT130I | CCWGG | 3 cut(s) | 46, 500, 2767 |
| BciVI | GTATCC | 4 cut(s) | 991, 1973, 2429, 2465 |
| BcnI | CCSGG | 1 cut(s) | 2423 |
| BcoDI | GTCTC | 2 cut(s) | 2059, 2346 |
| BcuI | ACTAGT | 3 cut(s) | 1001, 2033, 2837 |
| BfaI | CTAG | 9 cut(s) | 926, 1002, 1011, 1746, 1943, 1992, 2034, 2499, 2838 |
| BfoI | RGCGCY | 2 cut(s) | 1464, 2962 |
| BfrI | CTTAAG | 1 cut(s) | 2126 |
| BfuAI | ACCTGC | 1 cut(s) | 2419 |
| BfuI | GTATCC | 4 cut(s) | 991, 1973, 2429, 2465 |
| BglII | AGATCT | 1 cut(s) | 2101 |
| BisI | GCNGC | 6 cut(s) | 332, 434, 1080, 1656, 2232, 2247 |
| BlpI | GCTNAGC | 2 cut(s) | 2613, 2618 |
| BlsI | GCNGC | 6 cut(s) | 333, 435, 1081, 1657, 2233, 2248 |
| BmcAI | AGTACT | 1 cut(s) | 821 |
| Bme1390I | CCNGG | 4 cut(s) | 46, 500, 2423, 2767 |
| Bme18I | GGWCC | 2 cut(s) | 56, 179 |
| BmeT110I | CYCGRG | 1 cut(s) | 2264 |
| BmgT120I | GGNCC | 6 cut(s) | 42, 56, 179, 263, 2170, 2171 |
| BmiI | GGNNCC | 4 cut(s) | 57, 937, 2172, 2814 |
| BmrFI | CCNGG | 4 cut(s) | 46, 500, 2423, 2767 |
| BmsI | GCATC | 8 cut(s) | 445, 772, 1066, 1129, 1144, 1151, 2125, 2288 |
| BpiI | GAAGAC | 3 cut(s) | 1302, 2036, 2342 |
| BpmI | CTGGAG | 2 cut(s) | 1077, 2121 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2892 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 2613, 2618 |
| BpuEI | CTTGAG | 1 cut(s) | 70 |
| BpuMI | CCSGG | 1 cut(s) | 2423 |
| BsaJI | CCNNGG | 2 cut(s) | 2422, 2765 |
| BsaWI | WCCGGW | 2 cut(s) | 96, 954 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 191, 752, 2192, 2428 |
| Bse118I | RCCGGY | 1 cut(s) | 96 |
| Bse1I | ACTGG | 7 cut(s) | 817, 1595, 1642, 1735, 2084, 2197, 2554 |
| Bse21I | CCTNAGG | 1 cut(s) | 60 |
| Bse3DI | GCAATG | 2 cut(s) | 1365, 2720 |
| BseBI | CCWGG | 3 cut(s) | 46, 500, 2767 |
| BseDI | CCNNGG | 2 cut(s) | 2422, 2765 |
| BseGI | GGATG | 6 cut(s) | 554, 578, 1297, 1933, 2604, 2902 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 191, 752, 2192, 2428 |
| BseMI | GCAATG | 2 cut(s) | 1365, 2720 |
| BseMII | CTCAG | 6 cut(s) | 240, 1053, 1668, 2604, 2609, 2996 |
| BseNI | ACTGG | 7 cut(s) | 817, 1595, 1642, 1735, 2084, 2197, 2554 |
| BseRI | GAGGAG | 2 cut(s) | 606, 1796 |
| BseSI | GKGCMC | 3 cut(s) | 305, 2174, 2507 |
| BseXI | GCAGC | 6 cut(s) | 343, 445, 1066, 1642, 2243, 2258 |
| Bsh1236I | CGCG | 1 cut(s) | 2576 |
| Bsh1285I | CGRYCG | 1 cut(s) | 97 |
| BshFI | GGCC | 7 cut(s) | 44, 264, 498, 1775, 1872, 2172, 2779 |
| BshTI | ACCGGT | 1 cut(s) | 96 |
| BsiEI | CGRYCG | 1 cut(s) | 97 |
| BsiHKAI | GWGCWC | 3 cut(s) | 902, 2265, 2507 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2264 |
| BsiSI | CCGG | 3 cut(s) | 97, 955, 2422 |
| BslFI | GGGAC | 2 cut(s) | 25, 730 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 191, 752, 2192, 2428 |
| BsmAI | GTCTC | 2 cut(s) | 2059, 2346 |
| BsmBI | CGTCTC | 1 cut(s) | 2059 |
| BsmFI | GGGAC | 2 cut(s) | 25, 730 |
| BsnI | GGCC | 7 cut(s) | 44, 264, 498, 1775, 1872, 2172, 2779 |
| BsoBI | CYCGRG | 1 cut(s) | 2264 |
| Bsp120I | GGGCCC | 1 cut(s) | 2170 |
| Bsp1286I | GDGCHC | 5 cut(s) | 305, 902, 2174, 2265, 2507 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 2613, 2618 |
| Bsp68I | TCGCGA | 1 cut(s) | 2576 |
| BspACI | CCGC | 7 cut(s) | 135, 679, 785, 837, 1786, 2320, 2686 |
| BspANI | GGCC | 7 cut(s) | 44, 264, 498, 1775, 1872, 2172, 2779 |
| BspCNI | CTCAG | 6 cut(s) | 241, 1052, 1669, 2605, 2610, 2997 |
| BspFNI | CGCG | 1 cut(s) | 2576 |
| BspHI | TCATGA | 1 cut(s) | 1150 |
| BspLI | GGNNCC | 4 cut(s) | 57, 937, 2172, 2814 |
| BspMI | ACCTGC | 1 cut(s) | 2419 |
| BspPI | GGATC | 5 cut(s) | 590, 1126, 1919, 2033, 2249 |
| BspQI | GCTCTTC | 1 cut(s) | 2791 |
| BspTI | CTTAAG | 1 cut(s) | 2126 |
| BsrBI | CCGCTC | 1 cut(s) | 1786 |
| BsrDI | GCAATG | 2 cut(s) | 1365, 2720 |
| BsrFI | RCCGGY | 1 cut(s) | 96 |
| BsrI | ACTGG | 7 cut(s) | 817, 1595, 1642, 1735, 2084, 2197, 2554 |
| BssAI | RCCGGY | 1 cut(s) | 96 |
| BssECI | CCNNGG | 2 cut(s) | 2422, 2765 |
| BssSI | CACGAG | 1 cut(s) | 2817 |
| Bst2BI | CACGAG | 1 cut(s) | 2817 |
| Bst2UI | CCWGG | 3 cut(s) | 46, 500, 2767 |
| Bst4CI | ACNGT | 5 cut(s) | 449, 483, 1562, 2153, 2410 |
| Bst6I | CTCTTC | 4 cut(s) | 1605, 2791, 2821, 2905 |
| BstAFI | CTTAAG | 1 cut(s) | 2126 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 340, 2252 |
| BstC8I | GCNNGC | 3 cut(s) | 2383, 2496, 2926 |
| BstF5I | GGATG | 6 cut(s) | 554, 578, 1297, 1933, 2604, 2902 |
| BstFNI | CGCG | 1 cut(s) | 2576 |
| BstH2I | RGCGCY | 2 cut(s) | 1464, 2962 |
| BstHHI | GCGC | 3 cut(s) | 1463, 2886, 2961 |
| BstMAI | GTCTC | 2 cut(s) | 2059, 2346 |
| BstMCI | CGRYCG | 1 cut(s) | 97 |
| BstNI | CCWGG | 3 cut(s) | 46, 500, 2767 |
| BstNSI | RCATGY | 3 cut(s) | 830, 1987, 2359 |
| BstSCI | CCNGG | 4 cut(s) | 44, 498, 2421, 2765 |
| BstSLI | GKGCMC | 3 cut(s) | 305, 2174, 2507 |
| BstUI | CGCG | 1 cut(s) | 2576 |
| BstV1I | GCAGC | 6 cut(s) | 343, 445, 1066, 1642, 2243, 2258 |
| BstV2I | GAAGAC | 3 cut(s) | 1302, 2036, 2342 |
| BstX2I | RGATCY | 3 cut(s) | 595, 1118, 2101 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2167 |
| BstYI | RGATCY | 3 cut(s) | 595, 1118, 2101 |
| Bsu36I | CCTNAGG | 1 cut(s) | 60 |
| BsuI | GTATCC | 4 cut(s) | 991, 1973, 2429, 2465 |
| BsuRI | GGCC | 7 cut(s) | 44, 264, 498, 1775, 1872, 2172, 2779 |
| BtsCI | GGATG | 6 cut(s) | 554, 578, 1297, 1933, 2604, 2902 |
| BtsIMutI | CAGTG | 4 cut(s) | 1635, 1674, 2149, 2419 |
| BtuMI | TCGCGA | 1 cut(s) | 2576 |
| BveI | ACCTGC | 1 cut(s) | 2419 |
| Cac8I | GCNNGC | 3 cut(s) | 2383, 2496, 2926 |
| CaiI | CAGNNNCTG | 2 cut(s) | 439, 2252 |
| CciI | TCATGA | 1 cut(s) | 1150 |
| CfoI | GCGC | 3 cut(s) | 1463, 2886, 2961 |
| Cfr10I | RCCGGY | 1 cut(s) | 96 |
| Cfr13I | GGNCC | 6 cut(s) | 42, 56, 179, 263, 2170, 2171 |
| Csp6I | GTAC | 2 cut(s) | 820, 2131 |
| CspAI | ACCGGT | 1 cut(s) | 96 |
| CviQI | GTAC | 2 cut(s) | 820, 2131 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 812 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 812 |
| EaeI | YGGCCR | 2 cut(s) | 1773, 1870 |
| Eam1104I | CTCTTC | 4 cut(s) | 1605, 2791, 2821, 2905 |
| EarI | CTCTTC | 4 cut(s) | 1605, 2791, 2821, 2905 |
| EciI | GGCGGA | 1 cut(s) | 852 |
| Eco24I | GRGCYC | 1 cut(s) | 2174 |
| Eco47I | GGWCC | 2 cut(s) | 56, 179 |
| Eco57I | CTGAAG | 4 cut(s) | 461, 878, 1296, 2048 |
| Eco81I | CCTNAGG | 1 cut(s) | 60 |
| Eco88I | CYCGRG | 1 cut(s) | 2264 |
| EcoO109I | RGGNCCY | 2 cut(s) | 56, 2171 |
| EcoRII | CCWGG | 3 cut(s) | 44, 498, 2765 |
| EcoT22I | ATGCAT | 1 cut(s) | 1144 |
| EcoT38I | GRGCYC | 1 cut(s) | 2174 |
| Esp3I | CGTCTC | 1 cut(s) | 2059 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 950, 982, 2478, 2510, 2646, 2678 |
| FaqI | GGGAC | 2 cut(s) | 25, 730 |
| FauI | CCCGC | 2 cut(s) | 672, 2327 |
| FauNDI | CATATG | 3 cut(s) | 633, 1831, 2145 |
| FblI | GTMKAC | 1 cut(s) | 1554 |
| Fnu4HI | GCNGC | 6 cut(s) | 332, 434, 1080, 1656, 2232, 2247 |
| FokI | GGATG | 6 cut(s) | 541, 565, 1304, 1920, 2611, 2909 |
| FriOI | GRGCYC | 1 cut(s) | 2174 |
| Fsp4HI | GCNGC | 6 cut(s) | 332, 434, 1080, 1656, 2232, 2247 |
| FspBI | CTAG | 9 cut(s) | 926, 1002, 1011, 1746, 1943, 1992, 2034, 2499, 2838 |
| GlaI | GCGC | 3 cut(s) | 1462, 2885, 2960 |
| GluI | GCNGC | 6 cut(s) | 332, 434, 1080, 1656, 2232, 2247 |
| GsuI | CTGGAG | 2 cut(s) | 1077, 2121 |
| HaeII | RGCGCY | 2 cut(s) | 1464, 2962 |
| HaeIII | GGCC | 7 cut(s) | 44, 264, 498, 1775, 1872, 2172, 2779 |
| HapII | CCGG | 3 cut(s) | 97, 955, 2422 |
| HhaI | GCGC | 3 cut(s) | 1463, 2886, 2961 |
| Hin6I | GCGC | 3 cut(s) | 1461, 2884, 2959 |
| HinP1I | GCGC | 3 cut(s) | 1461, 2884, 2959 |
| HincII | GTYRAC | 2 cut(s) | 1189, 1555 |
| HindII | GTYRAC | 2 cut(s) | 1189, 1555 |
| HindIII | AAGCTT | 2 cut(s) | 236, 1799 |
| HinfI | GANTC | 9 cut(s) | 90, 212, 763, 1007, 1259, 1382, 1826, 2657, 2985 |
| HpaII | CCGG | 3 cut(s) | 97, 955, 2422 |
| HphI | GGTGA | 6 cut(s) | 379, 1652, 1721, 1745, 2443, 2719 |
| Hpy166II | GTNNAC | 5 cut(s) | 1189, 1555, 2133, 2505, 2822 |
| Hpy188I | TCNGA | 8 cut(s) | 441, 897, 1042, 1123, 1350, 1548, 1949, 2028 |
| Hpy8I | GTNNAC | 5 cut(s) | 1189, 1555, 2133, 2505, 2822 |
| Hpy99I | CGWCG | 2 cut(s) | 1304, 1559 |
| HpyCH4III | ACNGT | 5 cut(s) | 449, 483, 1562, 2153, 2410 |
| HpyCH4IV | ACGT | 2 cut(s) | 162, 985 |
| HpySE526I | ACGT | 2 cut(s) | 162, 985 |
| HspAI | GCGC | 3 cut(s) | 1461, 2884, 2959 |
| LguI | GCTCTTC | 1 cut(s) | 2791 |
| LmnI | GCTCC | 4 cut(s) | 19, 160, 1783, 2812 |
| Lsp1109I | GCAGC | 6 cut(s) | 343, 445, 1066, 1642, 2243, 2258 |
| LweI | GCATC | 8 cut(s) | 445, 772, 1066, 1129, 1144, 1151, 2125, 2288 |
| MaeI | CTAG | 9 cut(s) | 926, 1002, 1011, 1746, 1943, 1992, 2034, 2499, 2838 |
| MaeII | ACGT | 2 cut(s) | 162, 985 |
| MaeIII | GTNAC | 7 cut(s) | 213, 285, 610, 658, 1633, 1709, 2867 |
| MbiI | CCGCTC | 1 cut(s) | 1786 |
| MfeI | CAATTG | 2 cut(s) | 1864, 2673 |
| MflI | RGATCY | 3 cut(s) | 595, 1118, 2101 |
| MhlI | GDGCHC | 5 cut(s) | 305, 902, 2174, 2265, 2507 |
| MlsI | TGGCCA | 1 cut(s) | 1775 |
| MluNI | TGGCCA | 1 cut(s) | 1775 |
| MlyI | GAGTC | 4 cut(s) | 221, 1253, 1391, 1835 |
| MmeI | TCCRAC | 6 cut(s) | 954, 1453, 1927, 1957, 2482, 2534 |
| Mox20I | TGGCCA | 1 cut(s) | 1775 |
| Mph1103I | ATGCAT | 1 cut(s) | 1144 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1488 |
| MscI | TGGCCA | 1 cut(s) | 1775 |
| MslI | CAYNNNNRTG | 5 cut(s) | 277, 583, 1091, 2360, 2838 |
| Msp20I | TGGCCA | 1 cut(s) | 1775 |
| MspA1I | CMGCKG | 1 cut(s) | 2612 |
| MspCI | CTTAAG | 1 cut(s) | 2126 |
| MspI | CCGG | 3 cut(s) | 97, 955, 2422 |
| MspR9I | CCNGG | 4 cut(s) | 46, 500, 2423, 2767 |
| MunI | CAATTG | 2 cut(s) | 1864, 2673 |
| MvaI | CCWGG | 3 cut(s) | 46, 500, 2767 |
| MvnI | CGCG | 1 cut(s) | 2576 |
| NciI | CCSGG | 1 cut(s) | 2423 |
| NdeI | CATATG | 3 cut(s) | 633, 1831, 2145 |
| NlaIV | GGNNCC | 4 cut(s) | 57, 937, 2172, 2814 |
| NmeAIII | GCCGAG | 2 cut(s) | 1898, 3002 |
| NmuCI | GTSAC | 6 cut(s) | 213, 610, 658, 1633, 1709, 2867 |
| NruI | TCGCGA | 1 cut(s) | 2576 |
| NsiI | ATGCAT | 1 cut(s) | 1144 |
| NspI | RCATGY | 3 cut(s) | 830, 1987, 2359 |
| OliI | CACNNNNGTG | 1 cut(s) | 277 |
| PaeR7I | CTCGAG | 1 cut(s) | 2264 |
| PagI | TCATGA | 1 cut(s) | 1150 |
| PaqCI | CACCTGC | 1 cut(s) | 2419 |
| PciI | ACATGT | 2 cut(s) | 826, 2355 |
| PciSI | GCTCTTC | 1 cut(s) | 2791 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1305 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1488 |
| PfeI | GAWTC | 5 cut(s) | 90, 763, 1007, 2657, 2985 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 191 |
| PinAI | ACCGGT | 1 cut(s) | 96 |
| PkrI | GCNGC | 6 cut(s) | 333, 435, 1081, 1657, 2233, 2248 |
| PleI | GAGTC | 4 cut(s) | 220, 1253, 1390, 1834 |
| PpsI | GAGTC | 4 cut(s) | 220, 1253, 1390, 1834 |
| PpuMI | RGGWCCY | 1 cut(s) | 56 |
| PscI | ACATGT | 2 cut(s) | 826, 2355 |
| PshBI | ATTAAT | 1 cut(s) | 942 |
| Psp5II | RGGWCCY | 1 cut(s) | 56 |
| Psp6I | CCWGG | 3 cut(s) | 44, 498, 2765 |
| PspGI | CCWGG | 3 cut(s) | 44, 498, 2765 |
| PspN4I | GGNNCC | 4 cut(s) | 57, 937, 2172, 2814 |
| PspOMI | GGGCCC | 1 cut(s) | 2170 |
| PspPI | GGNCC | 6 cut(s) | 42, 56, 179, 263, 2170, 2171 |
| PspPPI | RGGWCCY | 1 cut(s) | 56 |
| PspXI | VCTCGAGB | 1 cut(s) | 2264 |
| PstNI | CAGNNNCTG | 2 cut(s) | 439, 2252 |
| PsuI | RGATCY | 3 cut(s) | 595, 1118, 2101 |
| PvuII | CAGCTG | 1 cut(s) | 2612 |
| RruI | TCGCGA | 1 cut(s) | 2576 |
| RsaI | GTAC | 2 cut(s) | 821, 2132 |
| RsaNI | GTAC | 2 cut(s) | 820, 2131 |
| RseI | CAYNNNNRTG | 5 cut(s) | 277, 583, 1091, 2360, 2838 |
| SalI | GTCGAC | 1 cut(s) | 1553 |
| SapI | GCTCTTC | 1 cut(s) | 2791 |
| SatI | GCNGC | 6 cut(s) | 332, 434, 1080, 1656, 2232, 2247 |
| Sau96I | GGNCC | 6 cut(s) | 42, 56, 179, 263, 2170, 2171 |
| ScaI | AGTACT | 1 cut(s) | 821 |
| SchI | GAGTC | 4 cut(s) | 221, 1253, 1391, 1835 |
| ScrFI | CCNGG | 4 cut(s) | 46, 500, 2423, 2767 |
| SduI | GDGCHC | 5 cut(s) | 305, 902, 2174, 2265, 2507 |
| SfaNI | GCATC | 8 cut(s) | 445, 772, 1066, 1129, 1144, 1151, 2125, 2288 |
| Sfr274I | CTCGAG | 1 cut(s) | 2264 |
| SinI | GGWCC | 2 cut(s) | 56, 179 |
| SlaI | CTCGAG | 1 cut(s) | 2264 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 277, 583, 1091, 2360, 2838 |
| SmlI | CTYRAG | 3 cut(s) | 85, 2126, 2264 |
| SmoI | CTYRAG | 3 cut(s) | 85, 2126, 2264 |
| SpeI | ACTAGT | 3 cut(s) | 1001, 2033, 2837 |
| SsiI | CCGC | 7 cut(s) | 135, 679, 785, 837, 1786, 2320, 2686 |
| SspI | AATATT | 1 cut(s) | 908 |
| SspMI | CTAG | 9 cut(s) | 926, 1002, 1011, 1746, 1943, 1992, 2034, 2499, 2838 |
| StyD4I | CCNGG | 4 cut(s) | 44, 498, 2421, 2765 |
| TaaI | ACNGT | 5 cut(s) | 449, 483, 1562, 2153, 2410 |
| TaiI | ACGT | 2 cut(s) | 165, 988 |
| TaqI | TCGA | 5 cut(s) | 93, 259, 1554, 2265, 2585 |
| TaqII | GACCGA | 1 cut(s) | 1115 |
| TatI | WGTACW | 2 cut(s) | 819, 2130 |
| TfiI | GAWTC | 5 cut(s) | 90, 763, 1007, 2657, 2985 |
| TscAI | CASTG | 4 cut(s) | 1642, 1681, 2156, 2419 |
| TseFI | GTSAC | 6 cut(s) | 213, 610, 658, 1633, 1709, 2867 |
| TseI | GCWGC | 6 cut(s) | 331, 433, 1079, 1655, 2231, 2246 |
| Tsp45I | GTSAC | 6 cut(s) | 213, 610, 658, 1633, 1709, 2867 |
| TspRI | CASTG | 4 cut(s) | 1642, 1681, 2156, 2419 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 191 |
| Vha464I | CTTAAG | 1 cut(s) | 2126 |
| VneI | GTGCAC | 1 cut(s) | 2503 |
| VpaK11BI | GGWCC | 2 cut(s) | 56, 179 |
| VspI | ATTAAT | 1 cut(s) | 942 |
| XapI | RAATTY | 6 cut(s) | 397, 514, 877, 1579, 1841, 2212 |
| XbaI | TCTAGA | 1 cut(s) | 1010 |
| XceI | RCATGY | 3 cut(s) | 830, 1987, 2359 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1436, 2194 |
| XhoI | CTCGAG | 1 cut(s) | 2264 |
| XmiI | GTMKAC | 1 cut(s) | 1554 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1488 |
| XspI | CTAG | 9 cut(s) | 926, 1002, 1011, 1746, 1943, 1992, 2034, 2499, 2838 |
| ZrmI | AGTACT | 1 cut(s) | 821 |
| Zsp2I | ATGCAT | 1 cut(s) | 1144 |