Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0000907

Physical Location & Seq

Genomic Coordinates Forward (+)

44839185 .. 44849577

Gene Structure 10393 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G548200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3612 bp

ATGGCCATAGATAGCGGAACTAAGGAGCAGTCGCACAAGGAACATAGGTCCAGGCAGTCGGGTTCCAAGGCCGACAAGAAGAAGCGTGCCGCTTCTTCCCAGAGCGGCAAGAAGCAAAACCCAAAGGCATTTGCTTTTAGCTCAACTGTGAAAGCCAAGCGTCTTCAATCTCGCTCCGTCGAGAAAGAGCAGCGCAGGCTTCATGTCCCAACCATTGATCGTTCCTATGGCGAACAACCTCCATATGTTGTTCTGGTGCATGGACCTCCCAAGGTTGGCAAGTCTTTGTTGATAAAGTCTCTTGTAAAGCATTATACCAAGCATAATTTACCGGAGGTTCGAGGCCCGATTACCATTGTTTCAGGGAAGCAAAGGCGGGTGCAGTTTGTGGAGTGCCCAAATGATATCAATGGTATGATTGATGCTGCAAAGTTTGCTGATTTAGCACTACTTCTAATCGATGGAAGCTATGGTTTTGAAATGGAGACATTTGAATTCCTGAACATATTGCAAGTTCATGGCTTCCCTAAGGTTATGGGAGTTCTTACTCACCTTGACAAGTTTAAAGATGTAAAGAAATTGAAGAAAACAAAGCAGCACCTCAAACATCGTTTCTGGACTGAAATATATGATGGAGCTAAATTGTTTTATTTATCTGGTCTCATTCATGGAAAGTATGTCAAACGTGAAATTCACAATCTGGCACGTTTCATATCTGTTATGAAGTTCCATCCTTTATCTTGGCGAACTGCTCATCCTTATGTTTTAGTAGATCGTTTTGAAGATGTCACTCCTCCTGAAAAAGTGCGTTTGAATAATAAATGCGATAGAAATGTCACACTGTACGGTTATTTGCGGGGCTGTAACATGAAAAAAGGAACAAAGATTCATATTGCAGGTGTTGGGGATTACAGTTTAGCTGGTATGACAGGCTTAGCTGATCCTTGCCCCTTACCCTCAGCTGCCAAAAAGAAGGGACTGCGTGATAAGGAAAAATTGTTTTATGCACCCATGTCTGGACTTGGGGATCTCCTGTATGATAAGGATGCTGTTTATATAAACATAAATGACCACTTTGTCCAGTTTTCCAACATTGATGAAAAGGGTGAAGCAACAAATGAAGGCAAGTGCCAAGATGTGGGTGTGGCTTTGGTAAAATCTCTTCAGAACACAAAATATTCAGTTGATGAAAAGTTACAGGAGAGCTTCATTAATCTATTTAGTCGGAAGCCTAATTTATTGTCAAAGGCTCAAAGTGATGGAAAAGATACTGATGAATCTAGAGAACATATTGGTAGAATAGAGTCTTTTGAGGAATATCAGTCTGGGGAAGCAACCAAAGGTGAAGGTTCTGCTGAAGAAAGTGATGTGGAGGATTTTGATGGTTCAGAATCAGAATCTTCAGATAAGAATGAAGCAGCTCATAAAGATGCATCGGATCATGATGCTACTCTTAAAGATCACCTGAAGGAACATGTTGAGTTTCATGATGGAAGGTCAAGGAGAAAAGTTATCTTTCGAAATGACCTTGATCGTAACGATATGGAGGATTCAGATTTAGAGGCTGAAGATGACGGCAATGACAACAATGAGGATGATATTCATGCATCTTCTGGTTCAGAGTCTTCAGAGGAAGATGAAGATATTCATGAAACAGACGATGAGATGGGAAACATTGCAAAGTGGAAAGAATCTTTGGTAGAAAGGACTTCCTCAAGACAAATTATTAACCTTATGCAACTTGTATATGGGAAATCTACATCGACACAAGCAACTTCTATCAATGAAGAATGTGATGGTAGTGCAGATGATGAAAGTGATGGAGATGACTTTTTTAAGCCAAAAGGAGAAGGAAACAAGAAACATGGAGGAATAGAAGGCGGAAATTGGAATGTCGAGGACTGTTCCAAATTCACAAATTATTCGAATCTCAAAGACTGGAAAGAAGAAAAGCTTAGGGAGGGTATTCGTGATCGTTTTGTTACTGGTGATTGGTCGAAAGCTTCTCAAAGAAATCAAGCTGCTGAGGCTAAAGTTGAAGATGATGACGCTGTGTATGGTGACTTTGAAGATTTAGAAACTGGGGAGAAGCATGATGGGAATCATTCCAGTGATGCAAGCAATGATGCAAACCACAAGGAAGATGATTTGGCCAAAGAGGAGAGGAGGCTGAAAAAGCTTGCTCTTCGTGCAAAGTTTGATGCTCAGTTTGATGGAGCTGAGTCATCTGAAGAGGAGCTTGAGAATAAACACGAAGGCAAATTTGGTAGAGATCAATCCAAAGAAAGTGGCTATTTTGACAGGCTGAAGGATGAGATTGAACTTCGGAAGCAAATGAATATAGCTGAACTCAATGACCTGGATGAGGCCACCCGATTAGAGATAGAGGGTTTCCGGACTGGGACTTACCTAAGGTTGGAGGTTCATGACGTCCCTTATGAGATGGTTGAATATTTTGACCCCTGCCATCCTATTTTGGTTGGAGGAATTGGTGTTGGTGAAGAAAATGTCGGACACATGCAGGCCAGGTTAAAGCGGCATAGGTGGCACAAGAAAGTACTTAAGACTAGCGATCCTATTATTGTTTCTATCGGGTGGAGGCGGTACCAAACAATACCTGTTTATGCTATTGAAGATCGTAATGGAAGGCATCGCATGCTTAAGTACACTCCTGAACACATGCATTGCCTTGCAATGTTTTGGGGCCCTCTTGCCCCTCCTAATACTGGTGTGGTTGCTTTCCAGAATTTATCAAACAATCAGGTGCAGTTTAGGATCACAGCAACTGCTGTTGTGCTTGAGTTCAACCACACATCACGAATAGTGAAGAAACTCAAACTAGTTGGTCACCCCTGCAAGATCTTCAAGAACACTGCACTTGTAAAAGATATGTTTACGTCAGATCTTGAAATAGCTCGATTTGAAGGAGCCGCTGTTCGAACTGTCAGTGGCATTCGGGGGCAGGTGAAAAAGGCTGCAAAAGAAGAAATTGGTAACCAACCAAAAAAGATGGGTGGACAACCAAAAGAAGGGATAGCTAGGTGCACCTTTGAGGATAAAATTAAGATGAGTGACATTGTTTTTTTGCGTGCTTGGACCCAAGTTGAAGTTCCTCAGTTTTACAACCCGTTGACGACATCACTGCAACCTCGTGATAAGACCTGGCAAGGGATGAAAACTACTGCTGAATTGAGGAGAGAACATAATATTCCTATTCCTGTTAACAAAGATTCACTTTACAAGCCCATTGAAAGGAAGCTGAAGAAGTTCAACCCATTGGTGATTCCTAAGTCATTGCAGGCTGCTTTACCATTTGCTTCAAAGCCTAAGGATATACCCAGTAGAGGAAGGCCACTTCTTGAAAATAGAAGAGCTGTTGTCATGGAACCTCATGAACGGAAAGTTCATGCTCTTGTTCAACATCTTCGATTAATTAGAAATGAGAAGATGAAGAAGCGCAAGCTAAAGGATGATAAAAAAAGAAAAGAAATTGAAGTGCAGAAAGCCAAAGAAGAGCAATTGTCGAAAAAGCGCCAGAGAGAAGAACGACGAGAGAGATATCGGGAGCAAGACAAGCTGAAGAAAAAAATCAGGAGAAATGCAGAGGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000462 GO:0000469 GO:0000478 GO:0000479 GO:0001882 GO:0001883 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0003924 GO:0005488 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0030686 GO:0031974 GO:0031981 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0032991 GO:0034470 GO:0034511 GO:0034641 GO:0034660 GO:0035639 GO:0036094 GO:0042254 GO:0042274 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0097367 GO:1901265 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

AARP2CN RIBIOP_C

Protein Analysis

1204

Amino Acids

137.48

Weight (kDa)

8.41

Isoelectric Point (pI)

45.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000907)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06720 AT1G06720 AT1G06720
fragaria_vesca	FvH4_4g10660
malus_domestica	MD00G1071300.v1.1 MD00G1152200.v1.1 MD03G1154000.v1.1
prunus_persica	Prupe.1G548200_v2.0.a1 Prupe.8G069100_v2.0.a1 Prupe.8G069100_v2.0.a1
pyrus_communis	pycom03g10780 pycom03g10790 pycom07g03680 pycom11g14630 pycom11g14640
rosa_chinensis	RchiOBHm_Chr2g0114561 RchiOBHm_Chr2g0114571 RchiOBHm_Chr4g0406311 RchiOBHm_Chr5g0051051
rosa_laevigata	RLG00000008777 RLG00000018114 RLG00000034749
rosa_multiflora	Rmu_co8051646.1_g000001 Rmu_sc0000370.1_g000003 Rmu_sc0000371.1_g000013 Rmu_sc0000446.1_g000025 Rmu_sc0000898.1_g000055 Rmu_sc0001520.1_g000010 Rmu_sc0003452.1_g000005 Rmu_sc0030223.1_g000001
rosa_roxburghii	Rroxscaffold_1G00029430 Rroxscaffold_2G00130290 Rroxscaffold_3G00239130 Rroxscaffold_3G00239160
rosa_rugosa	Rorug04G0068100 Rorug04G0068200 Rorug04G0068300 Rorug05G0265700 Rorug07G0181200 Rorug07G0181300 Rorug07G0181400 Rorug07G0181500 Rorug07G0181500 Rorug07G0181600 Rorug07G0181800
rosa_samantha	Rh2AG248700 Rh2BG258300 Rh2BG258500 Rh2CG252100 Rh2CG252200 Rh2CG252500 Rh2DG256800 Rh4AG137200 Rh4BG134800 Rh4CG145400 Rh4DG131800 Rh5AG337900 Rh5BG347600 Rh5CG375000 Rh5DG360700
rosa_wichuraiana	Rw0G006840 Rw0G023620 Rw2G019340 Rw4G011120 Rw5G031930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	887, 2953
AasI	GACNNNNNNGTC	1 cut(s)	1076
AatII	GACGTC	1 cut(s)	2433
Acc36I	ACCTGC	2 cut(s)	887, 2953
Acc65I	GGTACC	1 cut(s)	2604
AccB1I	GGYRCC	1 cut(s)	2604
AccB7I	CCANNNNNTGG	1 cut(s)	1138
AccBSI	CCGCTC	1 cut(s)	105
AccIII	TCCGGA	1 cut(s)	2394
AciI	CCGC	9 cut(s)	15, 90, 105, 376, 856, 1881, 2536, 2602, 2931
AclWI	GGATC	5 cut(s)	935, 1035, 1446, 2567, 2783
AcoI	YGGCCR	2 cut(s)	3, 2151
AcsI	RAATTY	5 cut(s)	494, 690, 1910, 2261, 2746
AcyI	GRCGYC	1 cut(s)	2430
AfaI	GTAC	4 cut(s)	845, 2559, 2606, 2666
AflII	CTTAAG	2 cut(s)	2561, 2660
AflIII	ACRYGT	1 cut(s)	1474
AhlI	ACTAGT	1 cut(s)	2839
AjnI	CCWGG	4 cut(s)	50, 2358, 2525, 3161
AjuI	GAANNNNNNNTTGG	6 cut(s)	1679, 1711, 2247, 2279, 3093, 3125
AloI	GAACNNNNNNTCC	4 cut(s)	739, 771, 2919, 2951
Alw21I	GWGCWC	1 cut(s)	3047
Alw26I	GTCTC	3 cut(s)	303, 479, 665
Alw44I	GTGCAC	1 cut(s)	3043
AlwI	GGATC	5 cut(s)	935, 1035, 1446, 2567, 2783
AlwNI	CAGNNNCTG	1 cut(s)	2786
Aor13HI	TCCGGA	1 cut(s)	2394
AoxI	GGCC	8 cut(s)	3, 69, 343, 2151, 2367, 2523, 2704, 3350
ApaI	GGGCCC	1 cut(s)	2708
ApaLI	GTGCAC	1 cut(s)	3043
ApeKI	GCWGC	8 cut(s)	190, 425, 595, 962, 1418, 2021, 2975, 3302
ApoI	RAATTY	5 cut(s)	494, 690, 1910, 2261, 2746
AseI	ATTAAT	2 cut(s)	1212, 3431
Asp700I	GAANNNNTTC	2 cut(s)	1644, 3266
Asp718I	GGTACC	1 cut(s)	2604
AspLEI	GCGC	3 cut(s)	195, 3459, 3534
AspS9I	GGNCC	6 cut(s)	48, 263, 344, 2704, 2705, 3096
AsuII	TTCGAA	3 cut(s)	1519, 1925, 2938
AvaII	GGWCC	3 cut(s)	48, 263, 3096
AxyI	CCTNAGG	3 cut(s)	528, 2411, 3327
BaeGI	GKGCMC	3 cut(s)	398, 2708, 3047
BalI	TGGCCA	2 cut(s)	5, 2153
BanI	GGYRCC	1 cut(s)	2604
BanII	GRGCYC	1 cut(s)	2708
BarI	GAAGNNNNNNTAC	2 cut(s)	1146, 1178
BauI	CACGAG	1 cut(s)	3150
BbsI	GAAGAC	2 cut(s)	155, 1617
Bbv12I	GWGCWC	1 cut(s)	3047
BbvCI	CCTCAGC	2 cut(s)	958, 2025
BbvI	GCAGC	8 cut(s)	202, 412, 607, 949, 1430, 2008, 2962, 3289
BceAI	ACGGC	1 cut(s)	1591
BcgI	CGANNNNNNTGC	2 cut(s)	3124, 3158
BciT130I	CCWGG	4 cut(s)	52, 2360, 2527, 3163
BcoDI	GTCTC	3 cut(s)	303, 479, 665
BcuI	ACTAGT	1 cut(s)	2839
BfaI	CTAG	4 cut(s)	1281, 2568, 2840, 3039
BfoI	RGCGCY	1 cut(s)	3535
BfrI	CTTAAG	2 cut(s)	2561, 2660
BfuAI	ACCTGC	2 cut(s)	887, 2953
BglII	AGATCT	2 cut(s)	2859, 2902
BlpI	GCTNAGC	1 cut(s)	934
BmcAI	AGTACT	1 cut(s)	2559
Bme1390I	CCNGG	4 cut(s)	52, 2360, 2527, 3163
Bme18I	GGWCC	3 cut(s)	48, 263, 3096
BmgT120I	GGNCC	6 cut(s)	48, 263, 344, 2704, 2705, 3096
BmiI	GGNNCC	7 cut(s)	64, 2606, 2705, 2706, 2929, 3098, 3387
BmrFI	CCNGG	4 cut(s)	52, 2360, 2527, 3163
BmrI	ACTGGG	3 cut(s)	2091, 2409, 3333
BmuI	ACTGGG	3 cut(s)	2091, 2409, 3333
BpiI	GAAGAC	2 cut(s)	155, 1617
Bpu10I	CCTNAGC	3 cut(s)	958, 1955, 2025
Bpu1102I	GCTNAGC	1 cut(s)	934
Bpu14I	TTCGAA	3 cut(s)	1519, 1925, 2938
BpuEI	CTTGAG	3 cut(s)	1699, 2261, 2819
Bsa29I	ATCGAT	1 cut(s)	459
BsaBI	GATNNNNATC	1 cut(s)	2100
BsaHI	GRCGYC	1 cut(s)	2430
BsaI	GGTCTC	1 cut(s)	665
BsaJI	CCNNGG	2 cut(s)	66, 270
BsaWI	WCCGGW	2 cut(s)	331, 2394
BsaXI	ACNNNNNCTCC	2 cut(s)	2919, 2949
Bse1I	ACTGG	8 cut(s)	1081, 1943, 1990, 2086, 2109, 2404, 2731, 3339
Bse21I	CCTNAGG	3 cut(s)	528, 2411, 3327
Bse3DI	GCAATG	6 cut(s)	1585, 1674, 2128, 2683, 2700, 3293
Bse8I	GATNNNNATC	1 cut(s)	2100
BseAI	TCCGGA	1 cut(s)	2394
BseBI	CCWGG	4 cut(s)	52, 2360, 2527, 3163
BseCI	ATCGAT	1 cut(s)	459
BseDI	CCNNGG	2 cut(s)	66, 270
BseGI	GGATG	9 cut(s)	730, 754, 1051, 1600, 2317, 2368, 2467, 3177, 3475
BseJI	GATNNNNATC	1 cut(s)	2100
BseMI	GCAATG	6 cut(s)	1585, 1674, 2128, 2683, 2700, 3293
BseMII	CTCAG	5 cut(s)	972, 2016, 2211, 2219, 3128
BseNI	ACTGG	8 cut(s)	1081, 1943, 1990, 2086, 2109, 2404, 2731, 3339
BseRI	GAGGAG	5 cut(s)	783, 2174, 2179, 2249, 3208
BseSI	GKGCMC	3 cut(s)	398, 2708, 3047
BseXI	GCAGC	8 cut(s)	202, 412, 607, 949, 1430, 2008, 2962, 3289
BsgI	GTGCAG	5 cut(s)	401, 1824, 2786, 2859, 3518
BshFI	GGCC	8 cut(s)	5, 71, 345, 2153, 2369, 2525, 2706, 3352
BshNI	GGYRCC	1 cut(s)	2604
BshVI	ATCGAT	1 cut(s)	459
BsiHKAI	GWGCWC	1 cut(s)	3047
BsiSI	CCGG	2 cut(s)	332, 2395
BslFI	GGGAC	4 cut(s)	191, 990, 2416, 2417
BsmAI	GTCTC	3 cut(s)	303, 479, 665
BsmFI	GGGAC	4 cut(s)	191, 990, 2416, 2417
BsmI	GAATGC	1 cut(s)	2952
BsnI	GGCC	8 cut(s)	5, 71, 345, 2153, 2369, 2525, 2706, 3352
Bso31I	GGTCTC	1 cut(s)	665
Bsp119I	TTCGAA	3 cut(s)	1519, 1925, 2938
Bsp120I	GGGCCC	1 cut(s)	2704
Bsp1286I	GDGCHC	3 cut(s)	398, 2708, 3047
Bsp13I	TCCGGA	1 cut(s)	2394
Bsp1720I	GCTNAGC	1 cut(s)	934
BspACI	CCGC	9 cut(s)	15, 90, 105, 376, 856, 1881, 2536, 2602, 2931
BspANI	GGCC	8 cut(s)	5, 71, 345, 2153, 2369, 2525, 2706, 3352
BspCNI	CTCAG	5 cut(s)	971, 2017, 2212, 2218, 3127
BspDI	ATCGAT	1 cut(s)	459
BspEI	TCCGGA	1 cut(s)	2394
BspHI	TCATGA	5 cut(s)	1441, 1486, 1648, 2425, 3391
BspLI	GGNNCC	7 cut(s)	64, 2606, 2705, 2706, 2929, 3098, 3387
BspMI	ACCTGC	2 cut(s)	887, 2953
BspPI	GGATC	5 cut(s)	935, 1035, 1446, 2567, 2783
BspQI	GCTCTTC	3 cut(s)	2190, 3364, 3507
BspT104I	TTCGAA	3 cut(s)	1519, 1925, 2938
BspT107I	GGYRCC	1 cut(s)	2604
BspTI	CTTAAG	2 cut(s)	2561, 2660
BspTNI	GGTCTC	1 cut(s)	665
BsrBI	CCGCTC	1 cut(s)	105
BsrDI	GCAATG	6 cut(s)	1585, 1674, 2128, 2683, 2700, 3293
BsrI	ACTGG	8 cut(s)	1081, 1943, 1990, 2086, 2109, 2404, 2731, 3339
BssECI	CCNNGG	2 cut(s)	66, 270
BssNI	GRCGYC	1 cut(s)	2430
BssSI	CACGAG	1 cut(s)	3150
BssT1I	CCWWGG	2 cut(s)	66, 270
Bst2BI	CACGAG	1 cut(s)	3150
Bst2UI	CCWGG	4 cut(s)	52, 2360, 2527, 3163
Bst4CI	ACNGT	6 cut(s)	148, 843, 848, 914, 1904, 2944
Bst6I	CTCTTC	5 cut(s)	1167, 2190, 2226, 3364, 3507
BstACI	GRCGYC	1 cut(s)	2430
BstAFI	CTTAAG	2 cut(s)	2561, 2660
BstAPI	GCANNNNNTGC	2 cut(s)	434, 2656
BstBI	TTCGAA	3 cut(s)	1519, 1925, 2938
BstC8I	GCNNGC	9 cut(s)	87, 197, 2119, 2181, 2523, 2657, 3090, 3300, 3461
BstEII	GGTNACC	2 cut(s)	2846, 2993
BstENI	CCTNNNNNAGG	1 cut(s)	2363
BstF5I	GGATG	9 cut(s)	730, 754, 1051, 1600, 2317, 2368, 2467, 3177, 3475
BstH2I	RGCGCY	1 cut(s)	3535
BstHHI	GCGC	3 cut(s)	195, 3459, 3534
BstMAI	GTCTC	3 cut(s)	303, 479, 665
BstMWI	GCNNNNNNNGC	9 cut(s)	196, 434, 443, 2027, 2176, 2189, 2545, 2656, 3574
BstNI	CCWGG	4 cut(s)	52, 2360, 2527, 3163
BstNSI	RCATGY	4 cut(s)	1478, 2521, 2659, 2683
BstPI	GGTNACC	2 cut(s)	2846, 2993
BstSCI	CCNGG	4 cut(s)	50, 2358, 2525, 3161
BstSLI	GKGCMC	3 cut(s)	398, 2708, 3047
BstV1I	GCAGC	8 cut(s)	202, 412, 607, 949, 1430, 2008, 2962, 3289
BstV2I	GAAGAC	2 cut(s)	155, 1617
BstX2I	RGATCY	3 cut(s)	1027, 2859, 2902
BstYI	RGATCY	3 cut(s)	1027, 2859, 2902
Bsu15I	ATCGAT	1 cut(s)	459
Bsu36I	CCTNAGG	3 cut(s)	528, 2411, 3327
BsuRI	GGCC	8 cut(s)	5, 71, 345, 2153, 2369, 2525, 2706, 3352
BsuTUI	ATCGAT	1 cut(s)	459
BtgZI	GCGATG	1 cut(s)	2636
BtsCI	GGATG	9 cut(s)	730, 754, 1051, 1600, 2317, 2368, 2467, 3177, 3475
BtsI	GCAGTG	2 cut(s)	2871, 3140
BtsIMutI	CAGTG	5 cut(s)	839, 2116, 2871, 2953, 3140
BveI	ACCTGC	2 cut(s)	887, 2953
Cac8I	GCNNGC	9 cut(s)	87, 197, 2119, 2181, 2523, 2657, 3090, 3300, 3461
CaiI	CAGNNNCTG	1 cut(s)	2786
CciI	TCATGA	5 cut(s)	1441, 1486, 1648, 2425, 3391
CfoI	GCGC	3 cut(s)	195, 3459, 3534
Cfr13I	GGNCC	6 cut(s)	48, 263, 344, 2704, 2705, 3096
ClaI	ATCGAT	1 cut(s)	459
CseI	GACGC	2 cut(s)	149, 2057
Csp6I	GTAC	4 cut(s)	844, 2558, 2605, 2665
CspCI	CAANNNNNGTGG	2 cut(s)	2269, 2304
CviQI	GTAC	4 cut(s)	844, 2558, 2605, 2665
DraI	TTTAAA	1 cut(s)	565
DrdI	GACNNNNNNGTC	1 cut(s)	1076
DseDI	GACNNNNNNGTC	1 cut(s)	1076
EaeI	YGGCCR	2 cut(s)	3, 2151
Eam1104I	CTCTTC	5 cut(s)	1167, 2190, 2226, 3364, 3507
EarI	CTCTTC	5 cut(s)	1167, 2190, 2226, 3364, 3507
EciI	GGCGGA	1 cut(s)	1896
Eco130I	CCWWGG	2 cut(s)	66, 270
Eco24I	GRGCYC	1 cut(s)	2708
Eco31I	GGTCTC	1 cut(s)	665
Eco32I	GATATC	2 cut(s)	406, 3560
Eco47I	GGWCC	3 cut(s)	48, 263, 3096
Eco81I	CCTNAGG	3 cut(s)	528, 2411, 3327
Eco91I	GGTNACC	2 cut(s)	2846, 2993
EcoNI	CCTNNNNNAGG	1 cut(s)	2363
EcoO109I	RGGNCCY	2 cut(s)	2704, 2705
EcoO65I	GGTNACC	2 cut(s)	2846, 2993
EcoRI	GAATTC	1 cut(s)	494
EcoRII	CCWGG	4 cut(s)	50, 2358, 2525, 3161
EcoRV	GATATC	2 cut(s)	406, 3560
EcoT14I	CCWWGG	2 cut(s)	66, 270
EcoT22I	ATGCAT	3 cut(s)	1435, 1609, 2685
EcoT38I	GRGCYC	1 cut(s)	2708
ErhI	CCWWGG	2 cut(s)	66, 270
FalI	AAGNNNNNCTT	6 cut(s)	1938, 1970, 2223, 2255, 3219, 3251
FaqI	GGGAC	4 cut(s)	191, 990, 2416, 2417
FauI	CCCGC	2 cut(s)	369, 849
FauNDI	CATATG	1 cut(s)	244
FokI	GGATG	9 cut(s)	717, 741, 1058, 1607, 2324, 2375, 2454, 3184, 3482
FriOI	GRGCYC	1 cut(s)	2708
FspBI	CTAG	4 cut(s)	1281, 2568, 2840, 3039
GlaI	GCGC	3 cut(s)	194, 3458, 3533
HaeII	RGCGCY	1 cut(s)	3535
HaeIII	GGCC	8 cut(s)	5, 71, 345, 2153, 2369, 2525, 2706, 3352
HapII	CCGG	2 cut(s)	332, 2395
HgaI	GACGC	2 cut(s)	149, 2057
HhaI	GCGC	3 cut(s)	195, 3459, 3534
Hin1I	GRCGYC	1 cut(s)	2430
Hin6I	GCGC	3 cut(s)	193, 3457, 3532
HinP1I	GCGC	3 cut(s)	193, 3457, 3532
HincII	GTYRAC	2 cut(s)	3132, 3223
HindII	GTYRAC	2 cut(s)	3132, 3223
HindIII	AAGCTT	3 cut(s)	1952, 2001, 2177
HpaI	GTTAAC	1 cut(s)	3223
HpaII	CCGG	2 cut(s)	332, 2395
Hpy166II	GTNNAC	6 cut(s)	2667, 2895, 3017, 3045, 3132, 3223
Hpy8I	GTNNAC	6 cut(s)	2667, 2895, 3017, 3045, 3132, 3223
Hpy99I	CGWCG	2 cut(s)	182, 3552
HpyCH4III	ACNGT	6 cut(s)	148, 843, 848, 914, 1904, 2944
HpyCH4IV	ACGT	4 cut(s)	685, 706, 2430, 2897
HpyF10VI	GCNNNNNNNGC	9 cut(s)	196, 434, 443, 2027, 2176, 2189, 2545, 2656, 3574
HpySE526I	ACGT	4 cut(s)	685, 706, 2430, 2897
Hsp92I	GRCGYC	1 cut(s)	2430
HspAI	GCGC	3 cut(s)	193, 3457, 3532
Kpn2I	TCCGGA	1 cut(s)	2394
KpnI	GGTACC	1 cut(s)	2608
KspAI	GTTAAC	1 cut(s)	3223
LguI	GCTCTTC	3 cut(s)	2190, 3364, 3507
LmnI	GCTCC	7 cut(s)	25, 179, 635, 2216, 2236, 2927, 3565
Lsp1109I	GCAGC	8 cut(s)	202, 412, 607, 949, 1430, 2008, 2962, 3289
MaeI	CTAG	4 cut(s)	1281, 2568, 2840, 3039
MaeII	ACGT	4 cut(s)	685, 706, 2430, 2897
MbiI	CCGCTC	1 cut(s)	105
MfeI	CAATTG	1 cut(s)	3518
MflI	RGATCY	3 cut(s)	1027, 2859, 2902
MhlI	GDGCHC	3 cut(s)	398, 2708, 3047
MlsI	TGGCCA	2 cut(s)	5, 2153
MluNI	TGGCCA	2 cut(s)	5, 2153
MlyI	GAGTC	3 cut(s)	1313, 1631, 2231
MmeI	TCCRAC	5 cut(s)	1113, 1205, 2397, 2461, 2491
Mox20I	TGGCCA	2 cut(s)	5, 2153
Mph1103I	ATGCAT	3 cut(s)	1435, 1609, 2685
MroI	TCCGGA	1 cut(s)	2394
MroXI	GAANNNNTTC	2 cut(s)	1644, 3266
MscI	TGGCCA	2 cut(s)	5, 2153
MslI	CAYNNNNRTG	3 cut(s)	759, 1428, 2109
Msp20I	TGGCCA	2 cut(s)	5, 2153
MspA1I	CMGCKG	2 cut(s)	962, 2933
MspCI	CTTAAG	2 cut(s)	2561, 2660
MspI	CCGG	2 cut(s)	332, 2395
MspR9I	CCNGG	4 cut(s)	52, 2360, 2527, 3163
MunI	CAATTG	1 cut(s)	3518
Mva1269I	GAATGC	1 cut(s)	2952
MvaI	CCWGG	4 cut(s)	52, 2360, 2527, 3163
MwoI	GCNNNNNNNGC	9 cut(s)	196, 434, 443, 2027, 2176, 2189, 2545, 2656, 3574
NdeI	CATATG	1 cut(s)	244
NlaIV	GGNNCC	7 cut(s)	64, 2606, 2705, 2706, 2929, 3098, 3387
NmuCI	GTSAC	5 cut(s)	787, 835, 2060, 2846, 3071
NsiI	ATGCAT	3 cut(s)	1435, 1609, 2685
NspI	RCATGY	4 cut(s)	1478, 2521, 2659, 2683
NspV	TTCGAA	3 cut(s)	1519, 1925, 2938
PaeI	GCATGC	1 cut(s)	2659
PagI	TCATGA	5 cut(s)	1441, 1486, 1648, 2425, 3391
PaqCI	CACCTGC	2 cut(s)	887, 2953
PciI	ACATGT	1 cut(s)	1474
PciSI	GCTCTTC	3 cut(s)	2190, 3364, 3507
PctI	GAATGC	1 cut(s)	2952
PdmI	GAANNNNTTC	2 cut(s)	1644, 3266
PflMI	CCANNNNNTGG	1 cut(s)	1138
PleI	GAGTC	3 cut(s)	1312, 1630, 2230
PpsI	GAGTC	3 cut(s)	1312, 1630, 2230
PscI	ACATGT	1 cut(s)	1474
PshBI	ATTAAT	2 cut(s)	1212, 3431
Psp6I	CCWGG	4 cut(s)	50, 2358, 2525, 3161
PspEI	GGTNACC	2 cut(s)	2846, 2993
PspGI	CCWGG	4 cut(s)	50, 2358, 2525, 3161
PspN4I	GGNNCC	7 cut(s)	64, 2606, 2705, 2706, 2929, 3098, 3387
PspOMI	GGGCCC	1 cut(s)	2704
PspPI	GGNCC	6 cut(s)	48, 263, 344, 2704, 2705, 3096
PstNI	CAGNNNCTG	1 cut(s)	2786
PsuI	RGATCY	3 cut(s)	1027, 2859, 2902
PvuII	CAGCTG	1 cut(s)	962
RsaI	GTAC	4 cut(s)	845, 2559, 2606, 2666
RsaNI	GTAC	4 cut(s)	844, 2558, 2605, 2665
RseI	CAYNNNNRTG	3 cut(s)	759, 1428, 2109
SapI	GCTCTTC	3 cut(s)	2190, 3364, 3507
Sau96I	GGNCC	6 cut(s)	48, 263, 344, 2704, 2705, 3096
ScaI	AGTACT	1 cut(s)	2559
SchI	GAGTC	3 cut(s)	1313, 1631, 2231
ScrFI	CCNGG	4 cut(s)	52, 2360, 2527, 3163
SduI	GDGCHC	3 cut(s)	398, 2708, 3047
SfuI	TTCGAA	3 cut(s)	1519, 1925, 2938
SinI	GGWCC	3 cut(s)	48, 263, 3096
SmiMI	CAYNNNNRTG	3 cut(s)	759, 1428, 2109
SmlI	CTYRAG	5 cut(s)	1714, 2240, 2561, 2660, 2798
SmoI	CTYRAG	5 cut(s)	1714, 2240, 2561, 2660, 2798
SpeI	ACTAGT	1 cut(s)	2839
SphI	GCATGC	1 cut(s)	2659
SsiI	CCGC	9 cut(s)	15, 90, 105, 376, 856, 1881, 2536, 2602, 2931
SspI	AATATT	3 cut(s)	1178, 2453, 3208
SspMI	CTAG	4 cut(s)	1281, 2568, 2840, 3039
StyD4I	CCNGG	4 cut(s)	50, 2358, 2525, 3161
StyI	CCWWGG	2 cut(s)	66, 270
TaaI	ACNGT	6 cut(s)	148, 843, 848, 914, 1904, 2944
TaiI	ACGT	4 cut(s)	688, 709, 2433, 2900
TatI	WGTACW	2 cut(s)	2557, 2664
TauI	GCSGC	4 cut(s)	92, 108, 2539, 2933
TscAI	CASTG	5 cut(s)	846, 2116, 2878, 2953, 3147
TseFI	GTSAC	5 cut(s)	787, 835, 2060, 2846, 3071
TseI	GCWGC	8 cut(s)	190, 425, 595, 962, 1418, 2021, 2975, 3302
Tsp45I	GTSAC	5 cut(s)	787, 835, 2060, 2846, 3071
TspGWI	ACGGA	2 cut(s)	166, 3412
TspRI	CASTG	5 cut(s)	846, 2116, 2878, 2953, 3147
Van91I	CCANNNNNTGG	1 cut(s)	1138
Vha464I	CTTAAG	2 cut(s)	2561, 2660
VneI	GTGCAC	1 cut(s)	3043
VpaK11BI	GGWCC	3 cut(s)	48, 263, 3096
VspI	ATTAAT	2 cut(s)	1212, 3431
XagI	CCTNNNNNAGG	1 cut(s)	2363
XapI	RAATTY	5 cut(s)	494, 690, 1910, 2261, 2746
XbaI	TCTAGA	1 cut(s)	1280
XceI	RCATGY	4 cut(s)	1478, 2521, 2659, 2683
XmnI	GAANNNNTTC	2 cut(s)	1644, 3266
XspI	CTAG	4 cut(s)	1281, 2568, 2840, 3039
ZraI	GACGTC	1 cut(s)	2431
ZrmI	AGTACT	1 cut(s)	2559
Zsp2I	ATGCAT	3 cut(s)	1435, 1609, 2685

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.