Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0000907

Physical Location & Seq

Genomic Coordinates Reverse (-)

27975175 .. 27978657

Gene Structure 3483 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG248700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1593 bp

ATGGGAAACATTGCAAAGTGGAAAGGGTCTTTGGCAGAAAGGACTTTCTTGAAACAAACCACTAACCTTATCCAACTTGTATATGGGAAATCTACATCAATGTCAACTTCTGTCAATGAAGAAAATGATAGTAGCGCCGATGAGGAAAGTGATGGAGAAGACTTTTTAAAGCCAAAAGGAGAAGGAAACAAGAAACAGAGAGGGGTAGAAGGTGGAAATTGGAATGTCGACGACTGTTCCAAGTATTATTCAAATTTCAATGACTGGAAAAGGAAAGAATGTGAAGAGAGTATTTGCAATCGTTTTGTCACTGGTGATTGGTTGAAAGCTGCTTGGTTGAAAGCTGCTCAAAGAAATGAAACCACTGAGGATAATGAAGATGAAGATGTTGTCTATGGTGACTTTGAAGATTTAGAAACTGAGTCGTATGCGAAGGAATTTGTTAATAAATATGGAGGCAATTGTGGCCGAGTTCAATCCAAAGAAAGTGATTATTTTGATGAGCTGAAGGAGGAGATTGAACTGCAGAAAGAGATGAACAAAGCTGAACTCAATGACATTGACGAGGATACCCTAATAGAGATAGATGGTTTTCGAACAGCGACTTACCTACGATACTTTGATCCCTGCCATCCTATTCTAGTCGGAGGAATTGGTCTTAGGGAACAAAATGTTGGATACATGCAGACTAGGTTAAAACGGCATAGATGGCACAAGAAAGTTCTGAAGACTAGTGATCCTATCGTTGTTTCTATTGGGTGGAGACGATACCAAACAATACCAGTTTATGCCATTGAAGATCGCAATAGAAGGCATCGCAAGCTTAAGTACACTCCAGAACATATGCACTGTCTTGCCTTGTTTTTGGGCCCTCTTGCCCCTCCCAATACTGGTGTGGTTGCTTTCCAGAATTTATCAAAGAATCAGGCAGCATTTAGGATCACAGCAACTGCTGTTGTGCTCGAGTTCAACCACGCATCAAAGATAGAGAAGAAAGTCAAAATGGTTGGTTATCCCCGCCAGATATTCAAGAAGACAGCACTAATAGGAGACATGTTCATGTCCAATCTTGAAATAGCTCGCTTTGAAGGTGGTGCTATACGAACTGTCAGTGGTGTCCGGGGGCAGGTGAAGAAGAAATTGGTATCCAACAGAAAAAGATGGGAGGAAAACCAGAAGAAGTGCTTGCTAGCCCTACAACCTCGCGATCAGGTCTGGCGAGGGATGAAAACCACAGCTGAGCTGAGGAGAGAACACAATCTTCCTATTCCTGTTAATAAAGATTCACTTTACAAGCCAATTGAAAGGAAGCGGAGGAAGTTCAACCCATTGGTGATCTCGAAGTCATTGGAAACAGCTCTCCCATTTGTTTCAAAGTTTAAGAACACACCCAGGAGAAGAAGGCCACCTTTTGAAAATAGAAGAGCTGTTGTCATGGAGCCTCGTGAACGAAGAGTTCATACTAGTGTTCAACAGCTTGGTTTGATTAGTAGTGACAAGAGAAAGAAGCGCAGGGCTAAGGATGACAAGAAAAGAAAAGAGATCGAAGCATGCAAAGCTAAAACCGAGCAGTTGTTGAGAAAGCGCCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000462 GO:0000469 GO:0000478 GO:0000479 GO:0001882 GO:0001883 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0003924 GO:0005488 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0030686 GO:0031974 GO:0031981 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0032991 GO:0034470 GO:0034511 GO:0034641 GO:0034660 GO:0035639 GO:0036094 GO:0042254 GO:0042274 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0097367 GO:1901265 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

AARP2CN RIBIOP_C

Protein Analysis

530

Amino Acids

61.63

Weight (kDa)

9.61

Isoelectric Point (pI)

58.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RIBIOP_C	PF04950	160 - 381	1.1e-61	40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0000907)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06720 AT1G06720 AT1G06720
fragaria_vesca	FvH4_4g10660
malus_domestica	MD00G1071300.v1.1 MD00G1152200.v1.1 MD03G1154000.v1.1
prunus_persica	Prupe.1G548200_v2.0.a1 Prupe.8G069100_v2.0.a1 Prupe.8G069100_v2.0.a1
pyrus_communis	pycom03g10780 pycom03g10790 pycom07g03680 pycom11g14630 pycom11g14640
rosa_chinensis	RchiOBHm_Chr2g0114561 RchiOBHm_Chr2g0114571 RchiOBHm_Chr4g0406311 RchiOBHm_Chr5g0051051
rosa_laevigata	RLG00000008777 RLG00000018114 RLG00000034749
rosa_multiflora	Rmu_co8051646.1_g000001 Rmu_sc0000370.1_g000003 Rmu_sc0000371.1_g000013 Rmu_sc0000446.1_g000025 Rmu_sc0000898.1_g000055 Rmu_sc0001520.1_g000010 Rmu_sc0003452.1_g000005 Rmu_sc0030223.1_g000001
rosa_roxburghii	Rroxscaffold_1G00029430 Rroxscaffold_2G00130290 Rroxscaffold_3G00239130 Rroxscaffold_3G00239160
rosa_rugosa	Rorug04G0068100 Rorug04G0068200 Rorug04G0068300 Rorug05G0265700 Rorug07G0181200 Rorug07G0181300 Rorug07G0181400 Rorug07G0181500 Rorug07G0181500 Rorug07G0181600 Rorug07G0181800
rosa_samantha	Rh2AG248700 Rh2BG258300 Rh2BG258500 Rh2CG252100 Rh2CG252200 Rh2CG252500 Rh2DG256800 Rh4AG137200 Rh4BG134800 Rh4CG145400 Rh4DG131800 Rh5AG337900 Rh5BG347600 Rh5CG375000 Rh5DG360700
rosa_wichuraiana	Rw0G006840 Rw0G023620 Rw2G019340 Rw4G011120 Rw5G031930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1117
Acc36I	ACCTGC	1 cut(s)	1117
AccI	GTMKAC	1 cut(s)	228
AccII	CGCG	1 cut(s)	1206
AciI	CCGC	2 cut(s)	1018, 1312
AclWI	GGATC	3 cut(s)	617, 731, 947
AcoI	YGGCCR	1 cut(s)	466
AcsI	RAATTY	3 cut(s)	253, 437, 910
AcuI	CTGAAG	2 cut(s)	527, 746
AfaI	GTAC	1 cut(s)	830
AfiI	CCNNNNNNNGG	2 cut(s)	890, 1126
AflII	CTTAAG	1 cut(s)	824
AflIII	ACRYGT	1 cut(s)	1053
AhlI	ACTAGT	2 cut(s)	731, 1463
AjnI	CCWGG	1 cut(s)	1391
AjuI	GAANNNNNNNTTGG	6 cut(s)	14, 46, 657, 689, 1124, 1156
Alw21I	GWGCWC	1 cut(s)	963
Alw26I	GTCTC	2 cut(s)	757, 1044
AlwI	GGATC	3 cut(s)	617, 731, 947
AlwNI	CAGNNNCTG	1 cut(s)	950
Ama87I	CYCGRG	1 cut(s)	962
AoxI	GGCC	3 cut(s)	466, 868, 1403
ApaI	GGGCCC	1 cut(s)	872
ApeKI	GCWGC	3 cut(s)	329, 344, 929
ApoI	RAATTY	3 cut(s)	253, 437, 910
AspLEI	GCGC	3 cut(s)	137, 1512, 1587
AspS9I	GGNCC	2 cut(s)	868, 869
AsuC2I	CCSGG	1 cut(s)	1121
AsuHPI	GGTGA	4 cut(s)	326, 410, 1141, 1345
AsuII	TTCGAA	1 cut(s)	595
AsuNHI	GCTAGC	1 cut(s)	1189
AvaI	CYCGRG	1 cut(s)	962
BaeGI	GKGCMC	1 cut(s)	872
BanII	GRGCYC	1 cut(s)	872
BarI	GAAGNNNNNNTAC	2 cut(s)	1444, 1476
BauI	CACGAG	1 cut(s)	1443
BbsI	GAAGAC	3 cut(s)	165, 734, 1040
Bbv12I	GWGCWC	1 cut(s)	963
BbvCI	CCTCAGC	1 cut(s)	1244
BbvI	GCAGC	3 cut(s)	316, 331, 941
BccI	CCATC	5 cut(s)	146, 581, 639, 702, 1155
BceAI	ACGGC	1 cut(s)	716
BciT130I	CCWGG	1 cut(s)	1393
BciVI	GTATCC	3 cut(s)	562, 671, 1156
BcnI	CCSGG	1 cut(s)	1121
BcoDI	GTCTC	2 cut(s)	757, 1044
BcuI	ACTAGT	2 cut(s)	731, 1463
BfaI	CTAG	5 cut(s)	641, 690, 732, 1190, 1464
BfmI	CTRYAG	1 cut(s)	524
BfoI	RGCGCY	2 cut(s)	138, 1588
BfrI	CTTAAG	1 cut(s)	824
BfuAI	ACCTGC	1 cut(s)	1117
BfuI	GTATCC	3 cut(s)	562, 671, 1156
BisI	GCNGC	3 cut(s)	330, 345, 930
BlpI	GCTNAGC	1 cut(s)	1239
BlsI	GCNGC	3 cut(s)	331, 346, 931
Bme1390I	CCNGG	2 cut(s)	1121, 1393
BmeT110I	CYCGRG	1 cut(s)	962
BmgT120I	GGNCC	2 cut(s)	868, 869
BmiI	GGNNCC	2 cut(s)	870, 1440
BmrFI	CCNGG	2 cut(s)	1121, 1393
BmsI	GCATC	2 cut(s)	823, 986
BmtI	GCTAGC	1 cut(s)	1193
BpiI	GAAGAC	3 cut(s)	165, 734, 1040
BpmI	CTGGAG	1 cut(s)	819
Bpu10I	CCTNAGC	2 cut(s)	1244, 1518
Bpu1102I	GCTNAGC	1 cut(s)	1239
Bpu14I	TTCGAA	1 cut(s)	595
BpuMI	CCSGG	1 cut(s)	1121
BsaJI	CCNNGG	2 cut(s)	1120, 1391
Bsc4I	CCNNNNNNNGG	2 cut(s)	890, 1126
Bse1I	ACTGG	4 cut(s)	269, 316, 782, 895
Bse3DI	GCAATG	1 cut(s)	9
BseBI	CCWGG	1 cut(s)	1393
BseDI	CCNNGG	2 cut(s)	1120, 1391
BseGI	GGATG	3 cut(s)	631, 1230, 1528
BseLI	CCNNNNNNNGG	2 cut(s)	890, 1126
BseMI	GCAATG	1 cut(s)	9
BseMII	CTCAG	4 cut(s)	357, 411, 1230, 1235
BseNI	ACTGG	4 cut(s)	269, 316, 782, 895
BseRI	GAGGAG	2 cut(s)	527, 1261
BseSI	GKGCMC	1 cut(s)	872
BseXI	GCAGC	3 cut(s)	316, 331, 941
Bsh1236I	CGCG	1 cut(s)	1206
BshFI	GGCC	3 cut(s)	468, 870, 1405
BsiHKAI	GWGCWC	1 cut(s)	963
BsiHKCI	CYCGRG	1 cut(s)	962
BsiSI	CCGG	1 cut(s)	1120
BslI	CCNNNNNNNGG	2 cut(s)	890, 1126
BsmAI	GTCTC	2 cut(s)	757, 1044
BsmBI	CGTCTC	1 cut(s)	757
BsnI	GGCC	3 cut(s)	468, 870, 1405
BsoBI	CYCGRG	1 cut(s)	962
Bsp119I	TTCGAA	1 cut(s)	595
Bsp120I	GGGCCC	1 cut(s)	868
Bsp1286I	GDGCHC	2 cut(s)	872, 963
Bsp143I	GATC	7 cut(s)	622, 736, 799, 939, 1207, 1335, 1542
Bsp1720I	GCTNAGC	1 cut(s)	1239
Bsp68I	TCGCGA	1 cut(s)	1206
BspACI	CCGC	2 cut(s)	1018, 1312
BspANI	GGCC	3 cut(s)	468, 870, 1405
BspCNI	CTCAG	4 cut(s)	358, 412, 1231, 1236
BspFNI	CGCG	1 cut(s)	1206
BspLI	GGNNCC	2 cut(s)	870, 1440
BspMAI	CTGCAG	1 cut(s)	528
BspMI	ACCTGC	1 cut(s)	1117
BspOI	GCTAGC	1 cut(s)	1193
BspPI	GGATC	3 cut(s)	617, 731, 947
BspQI	GCTCTTC	1 cut(s)	1417
BspT104I	TTCGAA	1 cut(s)	595
BspTI	CTTAAG	1 cut(s)	824
BsrDI	GCAATG	1 cut(s)	9
BsrI	ACTGG	4 cut(s)	269, 316, 782, 895
BssECI	CCNNGG	2 cut(s)	1120, 1391
BssMI	GATC	7 cut(s)	622, 736, 799, 939, 1207, 1335, 1542
BssSI	CACGAG	1 cut(s)	1443
Bst2BI	CACGAG	1 cut(s)	1443
Bst2UI	CCWGG	1 cut(s)	1393
Bst4CI	ACNGT	3 cut(s)	236, 851, 1108
Bst6I	CTCTTC	3 cut(s)	279, 1417, 1447
BstAFI	CTTAAG	1 cut(s)	824
BstBI	TTCGAA	1 cut(s)	595
BstC8I	GCNNGC	5 cut(s)	821, 1081, 1187, 1191, 1552
BstDEI	CTNAG	6 cut(s)	366, 420, 659, 1239, 1244, 1518
BstF5I	GGATG	3 cut(s)	631, 1230, 1528
BstFNI	CGCG	1 cut(s)	1206
BstH2I	RGCGCY	2 cut(s)	138, 1588
BstHHI	GCGC	3 cut(s)	137, 1512, 1587
BstKTI	GATC	7 cut(s)	625, 739, 802, 942, 1210, 1338, 1545
BstMAI	GTCTC	2 cut(s)	757, 1044
BstMBI	GATC	7 cut(s)	622, 736, 799, 939, 1207, 1335, 1542
BstMWI	GCNNNNNNNGC	4 cut(s)	465, 709, 820, 1556
BstNI	CCWGG	1 cut(s)	1393
BstNSI	RCATGY	3 cut(s)	685, 1057, 1554
BstSCI	CCNGG	2 cut(s)	1119, 1391
BstSFI	CTRYAG	1 cut(s)	524
BstSLI	GKGCMC	1 cut(s)	872
BstUI	CGCG	1 cut(s)	1206
BstV1I	GCAGC	3 cut(s)	316, 331, 941
BstV2I	GAAGAC	3 cut(s)	165, 734, 1040
BsuI	GTATCC	3 cut(s)	562, 671, 1156
BsuRI	GGCC	3 cut(s)	468, 870, 1405
BtgZI	GCGATG	1 cut(s)	800
BtsCI	GGATG	3 cut(s)	631, 1230, 1528
BtsIMutI	CAGTG	4 cut(s)	309, 363, 847, 1117
BtuMI	TCGCGA	1 cut(s)	1206
BveI	ACCTGC	1 cut(s)	1117
Cac8I	GCNNGC	5 cut(s)	821, 1081, 1187, 1191, 1552
CaiI	CAGNNNCTG	1 cut(s)	950
CfoI	GCGC	3 cut(s)	137, 1512, 1587
Cfr13I	GGNCC	2 cut(s)	868, 869
Csp6I	GTAC	1 cut(s)	829
CviAII	CATG	5 cut(s)	682, 1054, 1060, 1435, 1551
CviQI	GTAC	1 cut(s)	829
DdeI	CTNAG	6 cut(s)	366, 420, 659, 1239, 1244, 1518
DpnI	GATC	7 cut(s)	624, 738, 801, 941, 1209, 1337, 1544
DpnII	GATC	7 cut(s)	622, 736, 799, 939, 1207, 1335, 1542
DraI	TTTAAA	1 cut(s)	168
EaeI	YGGCCR	1 cut(s)	466
Eam1104I	CTCTTC	3 cut(s)	279, 1417, 1447
EarI	CTCTTC	3 cut(s)	279, 1417, 1447
Eco24I	GRGCYC	1 cut(s)	872
Eco57I	CTGAAG	2 cut(s)	527, 746
Eco88I	CYCGRG	1 cut(s)	962
EcoO109I	RGGNCCY	1 cut(s)	869
EcoRII	CCWGG	1 cut(s)	1391
EcoT38I	GRGCYC	1 cut(s)	872
Esp3I	CGTCTC	1 cut(s)	757
FaeI	CATG	5 cut(s)	685, 1057, 1063, 1438, 1554
FalI	AAGNNNNNCTT	6 cut(s)	1169, 1201, 1272, 1304, 1393, 1425
FatI	CATG	5 cut(s)	681, 1053, 1059, 1434, 1550
FauI	CCCGC	1 cut(s)	1025
FauNDI	CATATG	1 cut(s)	843
FblI	GTMKAC	1 cut(s)	228
Fnu4HI	GCNGC	3 cut(s)	330, 345, 930
FokI	GGATG	3 cut(s)	618, 1237, 1535
FriOI	GRGCYC	1 cut(s)	872
Fsp4HI	GCNGC	3 cut(s)	330, 345, 930
FspBI	CTAG	5 cut(s)	641, 690, 732, 1190, 1464
GlaI	GCGC	3 cut(s)	136, 1511, 1586
GluI	GCNGC	3 cut(s)	330, 345, 930
GsuI	CTGGAG	1 cut(s)	819
HaeII	RGCGCY	2 cut(s)	138, 1588
HaeIII	GGCC	3 cut(s)	468, 870, 1405
HapII	CCGG	1 cut(s)	1120
HhaI	GCGC	3 cut(s)	137, 1512, 1587
Hin1II	CATG	5 cut(s)	685, 1057, 1063, 1438, 1554
Hin6I	GCGC	3 cut(s)	135, 1510, 1585
HinP1I	GCGC	3 cut(s)	135, 1510, 1585
HincII	GTYRAC	2 cut(s)	105, 229
HindII	GTYRAC	2 cut(s)	105, 229
HindIII	AAGCTT	1 cut(s)	821
HinfI	GANTC	3 cut(s)	422, 922, 1283
HpaII	CCGG	1 cut(s)	1120
HphI	GGTGA	4 cut(s)	326, 410, 1141, 1345
Hpy166II	GTNNAC	4 cut(s)	105, 229, 831, 1448
Hpy188I	TCNGA	2 cut(s)	647, 726
Hpy188III	TCNNGA	8 cut(s)	49, 836, 907, 1030, 1070, 1205, 1339, 1445
Hpy8I	GTNNAC	4 cut(s)	105, 229, 831, 1448
Hpy99I	CGWCG	1 cut(s)	233
HpyAV	CCTTC	7 cut(s)	176, 203, 427, 502, 804, 1082, 1395
HpyCH4III	ACNGT	3 cut(s)	236, 851, 1108
HpyCH4V	TGCA	6 cut(s)	14, 297, 526, 685, 847, 1554
HpyF10VI	GCNNNNNNNGC	4 cut(s)	465, 709, 820, 1556
HpyF3I	CTNAG	6 cut(s)	366, 420, 659, 1239, 1244, 1518
Hsp92II	CATG	5 cut(s)	685, 1057, 1063, 1438, 1554
HspAI	GCGC	3 cut(s)	135, 1510, 1585
Kzo9I	GATC	7 cut(s)	622, 736, 799, 939, 1207, 1335, 1542
LguI	GCTCTTC	1 cut(s)	1417
LmnI	GCTCC	1 cut(s)	1438
Lsp1109I	GCAGC	3 cut(s)	316, 331, 941
LweI	GCATC	2 cut(s)	823, 986
MaeI	CTAG	5 cut(s)	641, 690, 732, 1190, 1464
MaeIII	GTNAC	3 cut(s)	307, 398, 1493
MalI	GATC	7 cut(s)	624, 738, 801, 941, 1209, 1337, 1544
MboI	GATC	7 cut(s)	622, 736, 799, 939, 1207, 1335, 1542
MfeI	CAATTG	2 cut(s)	460, 1299
MhlI	GDGCHC	2 cut(s)	872, 963
MluCI	AATT	8 cut(s)	217, 253, 437, 460, 651, 910, 1139, 1299
MlyI	GAGTC	1 cut(s)	431
MmeI	TCCRAC	4 cut(s)	97, 625, 655, 1173
MseI	TTAA	6 cut(s)	167, 444, 695, 825, 1275, 1380
MslI	CAYNNNNRTG	2 cut(s)	1058, 1464
MspA1I	CMGCKG	1 cut(s)	1238
MspCI	CTTAAG	1 cut(s)	824
MspI	CCGG	1 cut(s)	1120
MspR9I	CCNGG	2 cut(s)	1121, 1393
MunI	CAATTG	2 cut(s)	460, 1299
MvaI	CCWGG	1 cut(s)	1393
MvnI	CGCG	1 cut(s)	1206
MwoI	GCNNNNNNNGC	4 cut(s)	465, 709, 820, 1556
NciI	CCSGG	1 cut(s)	1121
NdeI	CATATG	1 cut(s)	843
NdeII	GATC	7 cut(s)	622, 736, 799, 939, 1207, 1335, 1542
NheI	GCTAGC	1 cut(s)	1189
NlaIII	CATG	5 cut(s)	685, 1057, 1063, 1438, 1554
NlaIV	GGNNCC	2 cut(s)	870, 1440
NmeAIII	GCCGAG	1 cut(s)	494
NmuCI	GTSAC	3 cut(s)	307, 398, 1493
NruI	TCGCGA	1 cut(s)	1206
NspI	RCATGY	3 cut(s)	685, 1057, 1554
NspV	TTCGAA	1 cut(s)	595
PaeI	GCATGC	1 cut(s)	1554
PaeR7I	CTCGAG	1 cut(s)	962
PaqCI	CACCTGC	1 cut(s)	1117
PciI	ACATGT	1 cut(s)	1053
PciSI	GCTCTTC	1 cut(s)	1417
PfeI	GAWTC	2 cut(s)	922, 1283
PkrI	GCNGC	3 cut(s)	331, 346, 931
PleI	GAGTC	1 cut(s)	430
PpsI	GAGTC	1 cut(s)	430
PscI	ACATGT	1 cut(s)	1053
Psp6I	CCWGG	1 cut(s)	1391
PspGI	CCWGG	1 cut(s)	1391
PspN4I	GGNNCC	2 cut(s)	870, 1440
PspOMI	GGGCCC	1 cut(s)	868
PspPI	GGNCC	2 cut(s)	868, 869
PspXI	VCTCGAGB	1 cut(s)	962
PstI	CTGCAG	1 cut(s)	528
PstNI	CAGNNNCTG	1 cut(s)	950
PvuII	CAGCTG	1 cut(s)	1238
RruI	TCGCGA	1 cut(s)	1206
RsaI	GTAC	1 cut(s)	830
RsaNI	GTAC	1 cut(s)	829
RseI	CAYNNNNRTG	2 cut(s)	1058, 1464
SalI	GTCGAC	1 cut(s)	227
SapI	GCTCTTC	1 cut(s)	1417
SaqAI	TTAA	6 cut(s)	167, 444, 695, 825, 1275, 1380
SatI	GCNGC	3 cut(s)	330, 345, 930
Sau3AI	GATC	7 cut(s)	622, 736, 799, 939, 1207, 1335, 1542
Sau96I	GGNCC	2 cut(s)	868, 869
SchI	GAGTC	1 cut(s)	431
ScrFI	CCNGG	2 cut(s)	1121, 1393
SduI	GDGCHC	2 cut(s)	872, 963
SfaNI	GCATC	2 cut(s)	823, 986
SfcI	CTRYAG	1 cut(s)	524
Sfr274I	CTCGAG	1 cut(s)	962
SfuI	TTCGAA	1 cut(s)	595
SlaI	CTCGAG	1 cut(s)	962
SmiMI	CAYNNNNRTG	2 cut(s)	1058, 1464
SmlI	CTYRAG	2 cut(s)	824, 962
SmoI	CTYRAG	2 cut(s)	824, 962
SpeI	ACTAGT	2 cut(s)	731, 1463
SphI	GCATGC	1 cut(s)	1554
Sse9I	AATT	8 cut(s)	217, 253, 437, 460, 651, 910, 1139, 1299
SsiI	CCGC	2 cut(s)	1018, 1312
SspMI	CTAG	5 cut(s)	641, 690, 732, 1190, 1464
StyD4I	CCNGG	2 cut(s)	1119, 1391
TaaI	ACNGT	3 cut(s)	236, 851, 1108
TaqI	TCGA	5 cut(s)	228, 595, 963, 1340, 1545
TasI	AATT	8 cut(s)	217, 253, 437, 460, 651, 910, 1139, 1299
TatI	WGTACW	1 cut(s)	828
TfiI	GAWTC	2 cut(s)	922, 1283
Tru1I	TTAA	6 cut(s)	167, 444, 695, 825, 1275, 1380
Tru9I	TTAA	6 cut(s)	167, 444, 695, 825, 1275, 1380
TscAI	CASTG	4 cut(s)	316, 370, 854, 1117
TseFI	GTSAC	3 cut(s)	307, 398, 1493
TseI	GCWGC	3 cut(s)	329, 344, 929
Tsp45I	GTSAC	3 cut(s)	307, 398, 1493
TspDTI	ATGAA	8 cut(s)	132, 372, 390, 396, 551, 1048, 1241, 1448
TspRI	CASTG	4 cut(s)	316, 370, 854, 1117
Vha464I	CTTAAG	1 cut(s)	824
XapI	RAATTY	3 cut(s)	253, 437, 910
XceI	RCATGY	3 cut(s)	685, 1057, 1554
XcmI	CCANNNNNNNNNTGG	2 cut(s)	80, 892
XhoI	CTCGAG	1 cut(s)	962
XmiI	GTMKAC	1 cut(s)	228
XspI	CTAG	5 cut(s)	641, 690, 732, 1190, 1464

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.