Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0000907

Physical Location & Seq

Genomic Coordinates Forward (+)

10127107 .. 10132852

Gene Structure 5746 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g10780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2088 bp

ATGGCGATAGACAGCGGAACCAAGGAGCAGCCGCACAAGGAGCACAGGTCCCGGCAGTCGGGCGCCAAGGCCGACAAGAAGAAGAAGCCGGACGCCTCCCAAAACGGCAAGAAGCCAAACCCAAAGGCTTTCGCTTGCCAATCAGCCGGGAAAGCCAAGCGTCTTCAGTCTCGCACCGTCGAGAAGCAGCAGCGCCGCCTTTACGTCCCCACCATCGACCGTTCGTACGGCGAGCCGGCTCCGTATGTCGTTCTGGTTCATGGACCTCCGAAGGTTGGGAAGTCTTTGTTGATTAAGTCGCTTGTGAAGCATTATACCAAGCATAATTTGCCGGATGTTCGAGGCCCGATTACCATTGTTTCAGGGAAGCAAAGGCGGGTACAGTTTGTGGAGTGCCCTAATGATATCAATGGTATGATTGATGCCGCAAAGTTTGCTGATTTGGCACTACTACTTATAGACGGAAGCTACGGTTTTGAAATGGAAACATTTGAATTCCTGAATATATTACAAGTTCATGGTTTCCCAAAGGTTATGGGAGTTCTTACACACCTCGACAAGTTTAAAGATGTAAAGAAATTAAGGAAAACAAAGCAGCACCTCAAACATCGTTTCTGGACTGAAATATATGATGGAGCTAAATTGTTTTATTTATCTGGTCTCATTCATGGAAAGTATGTCAAGCGTGAAGTTCACAACCTGGCGCGTTTCATATCCGTTATGAAGTTTCATCCTTTATCTTGGAGAACTGCTCATCCTTATGTTTTGGTAGATCGTTTTGAAGATGTCACTCCACCTGAAAAAGTGCGTTTGAATAATAAATGCGATAGAAATGTCACATTGTATGGGTATTTGCGGGGATGTAACATGAGAAAAGGAACAAAGATTCATATTGCAGGTGTTGGGGATTACAGTTTAGCTGGCATGACAGGATTAGCTGATCCTTGTCCTTTACCCTCAGCTGCCAAAAAGAAGGGACTGCGTGATAAGGAAAAACTGTTTTATGCACCTATGTCTGGACTTGGGGATCTCCTGTATGATAAAGATGCTGTCTATATAAACATAAATGACCACTTTGTCCAGTTTTCAAACCTTGATGAAAAAGGCGAAGCAACAAAACAAGGAAACCCCCAAGATGTGGGTGTGGCTTTGGTAAAATCTCTTCAGAACACAAAATATTCGGTTGATGAAAAGTTAGAGGAGAGCTTCATTAATCTATTTAGCCGGAAGCCCAATTTATTATTGAGTGCTCATAGTGATGGAATAGATATTGATGAATCACGAGAACAGAATCTTATGATAGAGCCTGTAGAGGAATATCAGTCTGGGGAAGCTGTCAAAGGTGATGGTTCTGCTGAAGAAAGCGATGCGGAGGATTCTGATGGTTCAGAATCAGAATCTTTATATAAGAATGAAGCAGTTCCTAAAGATGCATCAGATGCTACTCTTAAAGATCACTTGAAAGAACATGTTGAGATTCATGATGGAAGGTCAAGGCGAAAAGTTATCTTTAGAAATGATCTTGATCATAACAATATGGAGGATTCAGCTGAAGAGGCTGAAGAAGAAGGTGACAATGATGACGACGACGACGATGACAACAATAATGATGTTGATAATCAGGGATCTTCTGGTTCAGAGTCTTCAGCAGAAGATGAAGATGTCCATGAAACAGATGATGAAACGGGGAACATTGCAAAGTGGAAAGAATCTTTGGTAGAAAGGGCTTCTTCAAGGCAAACTATTAACCTTATGCAACTTGTATATGGGAAATCAACATCAATGCCAACAACTTCTAGCAATGAAGATCATGATAGCAGTAGTGCAGATGATGAAAGTGATGAAGATGATGACTTTTTTGTGCCAAAAGGAGAAGGAAACAAGAAACATAGAGGAATAGAAAGTGGAAACTGGGATGTTGAGGACTGTTCCAAATTCACAAATTATTCGAATCTCAAAGACTGGAAAGAGGAAAAGCTTAGAGAGGGTATTTGTGATCGTTTTGTCACTGGTGATTGGTCGAAAGCTTCTCAAAGAAATCAACCCACAGAAGCTAAAGTTGAAGATGATGATCGATCTTTATGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000462 GO:0000469 GO:0000478 GO:0000479 GO:0001882 GO:0001883 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0003924 GO:0005488 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0030686 GO:0031974 GO:0031981 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0032991 GO:0034470 GO:0034511 GO:0034641 GO:0034660 GO:0035639 GO:0036094 GO:0042254 GO:0042274 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0097367 GO:1901265 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

AARP2CN RIBIOP_C

Protein Analysis

696

Amino Acids

78.33

Weight (kDa)

5.47

Isoelectric Point (pI)

44.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AARP2CN	PF08142	242 - 315	6.2e-26	AARP2CN (NUC121) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000907)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06720 AT1G06720 AT1G06720
fragaria_vesca	FvH4_4g10660
malus_domestica	MD00G1071300.v1.1 MD00G1152200.v1.1 MD03G1154000.v1.1
prunus_persica	Prupe.1G548200_v2.0.a1 Prupe.8G069100_v2.0.a1 Prupe.8G069100_v2.0.a1
pyrus_communis	pycom03g10780 pycom03g10790 pycom07g03680 pycom11g14630 pycom11g14640
rosa_chinensis	RchiOBHm_Chr2g0114561 RchiOBHm_Chr2g0114571 RchiOBHm_Chr4g0406311 RchiOBHm_Chr5g0051051
rosa_laevigata	RLG00000008777 RLG00000018114 RLG00000034749
rosa_multiflora	Rmu_co8051646.1_g000001 Rmu_sc0000370.1_g000003 Rmu_sc0000371.1_g000013 Rmu_sc0000446.1_g000025 Rmu_sc0000898.1_g000055 Rmu_sc0001520.1_g000010 Rmu_sc0003452.1_g000005 Rmu_sc0030223.1_g000001
rosa_roxburghii	Rroxscaffold_1G00029430 Rroxscaffold_2G00130290 Rroxscaffold_3G00239130 Rroxscaffold_3G00239160
rosa_rugosa	Rorug04G0068100 Rorug04G0068200 Rorug04G0068300 Rorug05G0265700 Rorug07G0181200 Rorug07G0181300 Rorug07G0181400 Rorug07G0181500 Rorug07G0181500 Rorug07G0181600 Rorug07G0181800
rosa_samantha	Rh2AG248700 Rh2BG258300 Rh2BG258500 Rh2CG252100 Rh2CG252200 Rh2CG252500 Rh2DG256800 Rh4AG137200 Rh4BG134800 Rh4CG145400 Rh4DG131800 Rh5AG337900 Rh5BG347600 Rh5CG375000 Rh5DG360700
rosa_wichuraiana	Rw0G006840 Rw0G023620 Rw2G019340 Rw4G011120 Rw5G031930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	887
AasI	GACNNNNNNGTC	1 cut(s)	1076
Acc36I	ACCTGC	1 cut(s)	887
AccB1I	GGYRCC	1 cut(s)	62
AccB7I	CCANNNNNTGG	1 cut(s)	1138
AccII	CGCG	1 cut(s)	706
AciI	CCGC	7 cut(s)	15, 32, 196, 376, 426, 856, 1370
AclWI	GGATC	3 cut(s)	935, 1035, 1633
AcsI	RAATTY	2 cut(s)	494, 1934
AcuI	CTGAAG	6 cut(s)	149, 1148, 1377, 1572, 1581, 1629
AcyI	GRCGYC	2 cut(s)	63, 93
AfaI	GTAC	2 cut(s)	227, 381
AfiI	CCNNNNNNNGG	4 cut(s)	58, 275, 1016, 1138
AflIII	ACRYGT	1 cut(s)	1468
AgsI	TTSAA	8 cut(s)	479, 494, 782, 814, 1089, 1462, 1734, 2063
AjnI	CCWGG	1 cut(s)	699
AjuI	GAANNNNNNNTTGG	2 cut(s)	1697, 1729
AloI	GAACNNNNNNTCC	2 cut(s)	739, 771
Alw21I	GWGCWC	2 cut(s)	45, 1252
Alw26I	GTCTC	2 cut(s)	174, 665
AlwI	GGATC	3 cut(s)	935, 1035, 1633
AoxI	GGCC	2 cut(s)	69, 343
ApeKI	GCWGC	5 cut(s)	28, 187, 190, 595, 962
ApoI	RAATTY	2 cut(s)	494, 1934
AseI	ATTAAT	1 cut(s)	1212
Asp700I	GAANNNNTTC	1 cut(s)	1419
AspLEI	GCGC	3 cut(s)	65, 195, 706
AspS9I	GGNCC	3 cut(s)	48, 263, 344
AsuC2I	CCSGG	2 cut(s)	52, 148
AsuHPI	GGTGA	3 cut(s)	1355, 1583, 2024
AsuII	TTCGAA	1 cut(s)	1949
AvaII	GGWCC	2 cut(s)	48, 263
BaeGI	GKGCMC	1 cut(s)	398
BanI	GGYRCC	1 cut(s)	62
BarI	GAAGNNNNNNTAC	2 cut(s)	1146, 1178
BauI	CACGAG	1 cut(s)	1281
BbsI	GAAGAC	2 cut(s)	155, 1635
Bbv12I	GWGCWC	2 cut(s)	45, 1252
BbvCI	CCTCAGC	1 cut(s)	958
BbvI	GCAGC	5 cut(s)	40, 199, 202, 607, 949
BccI	CCATC	6 cut(s)	221, 626, 1253, 1340, 1376, 1478
BceAI	ACGGC	2 cut(s)	121, 244
BciT130I	CCWGG	1 cut(s)	701
BclI	TGATCA	1 cut(s)	1525
BcnI	CCSGG	2 cut(s)	52, 148
BcoDI	GTCTC	2 cut(s)	174, 665
BfaI	CTAG	1 cut(s)	1797
BfmI	CTRYAG	1 cut(s)	1308
BfoI	RGCGCY	2 cut(s)	66, 196
BfuAI	ACCTGC	1 cut(s)	887
BisI	GCNGC	8 cut(s)	29, 32, 188, 191, 196, 426, 596, 963
BlsI	GCNGC	8 cut(s)	30, 33, 189, 192, 197, 427, 597, 964
Bme1390I	CCNGG	3 cut(s)	52, 148, 701
Bme18I	GGWCC	2 cut(s)	48, 263
BmgT120I	GGNCC	3 cut(s)	48, 263, 344
BmiI	GGNNCC	4 cut(s)	19, 50, 64, 240
BmrFI	CCNGG	3 cut(s)	52, 148, 701
BmrI	ACTGGG	1 cut(s)	1921
BmsI	GCATC	6 cut(s)	412, 1036, 1357, 1420, 1429, 1442
BmuI	ACTGGG	1 cut(s)	1921
BpiI	GAAGAC	2 cut(s)	155, 1635
BplI	GAGNNNNNCTC	2 cut(s)	736, 768
Bpu10I	CCTNAGC	1 cut(s)	958
Bpu14I	TTCGAA	1 cut(s)	1949
BpuMI	CCSGG	2 cut(s)	52, 148
Bsa29I	ATCGAT	1 cut(s)	2074
BsaBI	GATNNNNATC	2 cut(s)	1524, 2070
BsaHI	GRCGYC	2 cut(s)	63, 93
BsaI	GGTCTC	1 cut(s)	665
BsaJI	CCNNGG	2 cut(s)	21, 66
BsaXI	ACNNNNNCTCC	2 cut(s)	32, 62
Bsc4I	CCNNNNNNNGG	4 cut(s)	58, 275, 1016, 1138
Bse118I	RCCGGY	1 cut(s)	235
Bse1I	ACTGG	4 cut(s)	1081, 1916, 1967, 2014
Bse3DI	GCAATG	2 cut(s)	1692, 1807
Bse8I	GATNNNNATC	2 cut(s)	1524, 2070
BseBI	CCWGG	1 cut(s)	701
BseCI	ATCGAT	1 cut(s)	2074
BseDI	CCNNGG	2 cut(s)	21, 66
BseGI	GGATG	5 cut(s)	340, 730, 754, 866, 1921
BseJI	GATNNNNATC	2 cut(s)	1524, 2070
BseLI	CCNNNNNNNGG	4 cut(s)	58, 275, 1016, 1138
BseMI	GCAATG	2 cut(s)	1692, 1807
BseMII	CTCAG	1 cut(s)	972
BseNI	ACTGG	4 cut(s)	1081, 1916, 1967, 2014
BseRI	GAGGAG	1 cut(s)	1214
BseSI	GKGCMC	1 cut(s)	398
BseXI	GCAGC	5 cut(s)	40, 199, 202, 607, 949
BsgI	GTGCAG	1 cut(s)	1845
Bsh1236I	CGCG	1 cut(s)	706
Bsh1285I	CGRYCG	1 cut(s)	220
BshFI	GGCC	2 cut(s)	71, 345
BshNI	GGYRCC	1 cut(s)	62
BshVI	ATCGAT	1 cut(s)	2074
BsiEI	CGRYCG	1 cut(s)	220
BsiHKAI	GWGCWC	2 cut(s)	45, 1252
BsiSI	CCGG	6 cut(s)	52, 89, 147, 236, 332, 1225
BsiWI	CGTACG	1 cut(s)	225
BslFI	GGGAC	3 cut(s)	34, 191, 990
BslI	CCNNNNNNNGG	4 cut(s)	58, 275, 1016, 1138
BsmAI	GTCTC	2 cut(s)	174, 665
BsmFI	GGGAC	3 cut(s)	34, 191, 990
BsnI	GGCC	2 cut(s)	71, 345
Bso31I	GGTCTC	1 cut(s)	665
Bsp119I	TTCGAA	1 cut(s)	1949
Bsp1286I	GDGCHC	3 cut(s)	45, 398, 1252
BspACI	CCGC	7 cut(s)	15, 32, 196, 376, 426, 856, 1370
BspANI	GGCC	2 cut(s)	71, 345
BspCNI	CTCAG	1 cut(s)	971
BspDI	ATCGAT	1 cut(s)	2074
BspFNI	CGCG	1 cut(s)	706
BspHI	TCATGA	2 cut(s)	1480, 1810
BspLI	GGNNCC	4 cut(s)	19, 50, 64, 240
BspMI	ACCTGC	1 cut(s)	887
BspPI	GGATC	3 cut(s)	935, 1035, 1633
BspT104I	TTCGAA	1 cut(s)	1949
BspT107I	GGYRCC	1 cut(s)	62
BspTNI	GGTCTC	1 cut(s)	665
BsrDI	GCAATG	2 cut(s)	1692, 1807
BsrFI	RCCGGY	1 cut(s)	235
BsrI	ACTGG	4 cut(s)	1081, 1916, 1967, 2014
BssAI	RCCGGY	1 cut(s)	235
BssECI	CCNNGG	2 cut(s)	21, 66
BssNI	GRCGYC	2 cut(s)	63, 93
BssSI	CACGAG	1 cut(s)	1281
BssT1I	CCWWGG	2 cut(s)	21, 66
Bst2BI	CACGAG	1 cut(s)	1281
Bst2UI	CCWGG	1 cut(s)	701
Bst4CI	ACNGT	7 cut(s)	178, 221, 384, 473, 914, 999, 1928
Bst6I	CTCTTC	2 cut(s)	1167, 1548
BstACI	GRCGYC	2 cut(s)	63, 93
BstAPI	GCANNNNNTGC	3 cut(s)	328, 434, 1439
BstBI	TTCGAA	1 cut(s)	1949
BstC8I	GCNNGC	4 cut(s)	136, 233, 237, 922
BstDEI	CTNAG	2 cut(s)	958, 1979
BstF5I	GGATG	5 cut(s)	340, 730, 754, 866, 1921
BstFNI	CGCG	1 cut(s)	706
BstH2I	RGCGCY	2 cut(s)	66, 196
BstHHI	GCGC	3 cut(s)	65, 195, 706
BstMAI	GTCTC	2 cut(s)	174, 665
BstMCI	CGRYCG	1 cut(s)	220
BstMWI	GCNNNNNNNGC	8 cut(s)	40, 152, 307, 328, 434, 443, 1439, 1556
BstNI	CCWGG	1 cut(s)	701
BstNSI	RCATGY	1 cut(s)	1472
BstSCI	CCNGG	3 cut(s)	50, 146, 699
BstSFI	CTRYAG	1 cut(s)	1308
BstSLI	GKGCMC	1 cut(s)	398
BstUI	CGCG	1 cut(s)	706
BstV1I	GCAGC	5 cut(s)	40, 199, 202, 607, 949
BstV2I	GAAGAC	2 cut(s)	155, 1635
BstX2I	RGATCY	2 cut(s)	1027, 1625
BstYI	RGATCY	2 cut(s)	1027, 1625
Bsu15I	ATCGAT	1 cut(s)	2074
BsuRI	GGCC	2 cut(s)	71, 345
BsuTUI	ATCGAT	1 cut(s)	2074
BtgZI	GCGATG	1 cut(s)	1380
BtsCI	GGATG	5 cut(s)	340, 730, 754, 866, 1921
BtsIMutI	CAGTG	1 cut(s)	2007
BveI	ACCTGC	1 cut(s)	887
Cac8I	GCNNGC	4 cut(s)	136, 233, 237, 922
CciI	TCATGA	2 cut(s)	1480, 1810
CfoI	GCGC	3 cut(s)	65, 195, 706
Cfr10I	RCCGGY	1 cut(s)	235
Cfr13I	GGNCC	3 cut(s)	48, 263, 344
ClaI	ATCGAT	1 cut(s)	2074
CseI	GACGC	2 cut(s)	101, 149
Csp6I	GTAC	2 cut(s)	226, 380
CviAII	CATG	9 cut(s)	260, 518, 668, 868, 925, 1469, 1481, 1667, 1811
CviQI	GTAC	2 cut(s)	226, 380
DdeI	CTNAG	2 cut(s)	958, 1979
DinI	GGCGCC	1 cut(s)	64
DraI	TTTAAA	1 cut(s)	565
DrdI	GACNNNNNNGTC	1 cut(s)	1076
DseDI	GACNNNNNNGTC	1 cut(s)	1076
Eam1104I	CTCTTC	2 cut(s)	1167, 1548
EarI	CTCTTC	2 cut(s)	1167, 1548
Eco130I	CCWWGG	2 cut(s)	21, 66
Eco31I	GGTCTC	1 cut(s)	665
Eco32I	GATATC	1 cut(s)	406
Eco47I	GGWCC	2 cut(s)	48, 263
Eco57I	CTGAAG	6 cut(s)	149, 1148, 1377, 1572, 1581, 1629
EcoO109I	RGGNCCY	1 cut(s)	48
EcoRI	GAATTC	1 cut(s)	494
EcoRII	CCWGG	1 cut(s)	699
EcoRV	GATATC	1 cut(s)	406
EcoT14I	CCWWGG	2 cut(s)	21, 66
EcoT22I	ATGCAT	1 cut(s)	1435
EgeI	GGCGCC	1 cut(s)	64
EheI	GGCGCC	1 cut(s)	64
ErhI	CCWWGG	2 cut(s)	21, 66
FaeI	CATG	9 cut(s)	263, 521, 671, 871, 928, 1472, 1484, 1670, 1814
FalI	AAGNNNNNCTT	2 cut(s)	1714, 1746
FaqI	GGGAC	3 cut(s)	34, 191, 990
FatI	CATG	9 cut(s)	259, 517, 667, 867, 924, 1468, 1480, 1666, 1810
FauI	CCCGC	2 cut(s)	369, 849
FbaI	TGATCA	1 cut(s)	1525
Fnu4HI	GCNGC	8 cut(s)	29, 32, 188, 191, 196, 426, 596, 963
FokI	GGATG	5 cut(s)	347, 717, 741, 873, 1928
Fsp4HI	GCNGC	8 cut(s)	29, 32, 188, 191, 196, 426, 596, 963
FspBI	CTAG	1 cut(s)	1797
GlaI	GCGC	3 cut(s)	64, 194, 705
GluI	GCNGC	8 cut(s)	29, 32, 188, 191, 196, 426, 596, 963
HaeII	RGCGCY	2 cut(s)	66, 196
HaeIII	GGCC	2 cut(s)	71, 345
HapII	CCGG	6 cut(s)	52, 89, 147, 236, 332, 1225
HgaI	GACGC	2 cut(s)	101, 149
HhaI	GCGC	3 cut(s)	65, 195, 706
Hin1I	GRCGYC	2 cut(s)	63, 93
Hin1II	CATG	9 cut(s)	263, 521, 671, 871, 928, 1472, 1484, 1670, 1814
Hin6I	GCGC	3 cut(s)	63, 193, 704
HinP1I	GCGC	3 cut(s)	63, 193, 704
HindIII	AAGCTT	2 cut(s)	1976, 2025
HpaII	CCGG	6 cut(s)	52, 89, 147, 236, 332, 1225
HphI	GGTGA	3 cut(s)	1355, 1583, 2024
Hpy166II	GTNNAC	1 cut(s)	694
Hpy188I	TCNGA	7 cut(s)	270, 1167, 1381, 1390, 1396, 1438, 1639
Hpy188III	TCNNGA	8 cut(s)	181, 499, 616, 1017, 1281, 1481, 1523, 1811
Hpy8I	GTNNAC	1 cut(s)	694
Hpy99I	CGWCG	4 cut(s)	182, 1589, 1592, 1595
HpyAV	CCTTC	5 cut(s)	265, 967, 1482, 1562, 1868
HpyCH4III	ACNGT	7 cut(s)	178, 221, 384, 473, 914, 999, 1928
HpyCH4IV	ACGT	1 cut(s)	204
HpyCH4V	TGCA	6 cut(s)	896, 1007, 1433, 1697, 1756, 1826
HpyF10VI	GCNNNNNNNGC	8 cut(s)	40, 152, 307, 328, 434, 443, 1439, 1556
HpyF3I	CTNAG	2 cut(s)	958, 1979
HpySE526I	ACGT	1 cut(s)	204
Hsp92I	GRCGYC	2 cut(s)	63, 93
Hsp92II	CATG	9 cut(s)	263, 521, 671, 871, 928, 1472, 1484, 1670, 1814
HspAI	GCGC	3 cut(s)	63, 193, 704
KasI	GGCGCC	1 cut(s)	62
KroI	GCCGGC	1 cut(s)	235
KroNI	GCCGGC	1 cut(s)	237
Ksp22I	TGATCA	1 cut(s)	1525
LmnI	GCTCC	4 cut(s)	25, 40, 244, 635
Lsp1109I	GCAGC	5 cut(s)	40, 199, 202, 607, 949
LweI	GCATC	6 cut(s)	412, 1036, 1357, 1420, 1429, 1442
MaeI	CTAG	1 cut(s)	1797
MaeII	ACGT	1 cut(s)	204
MaeIII	GTNAC	5 cut(s)	787, 835, 863, 1571, 2005
MflI	RGATCY	2 cut(s)	1027, 1625
MhlI	GDGCHC	3 cut(s)	45, 398, 1252
MluCI	AATT	7 cut(s)	325, 494, 578, 641, 1234, 1934, 1942
Mly113I	GGCGCC	1 cut(s)	63
MlyI	GAGTC	1 cut(s)	1649
Mph1103I	ATGCAT	1 cut(s)	1435
MroNI	GCCGGC	1 cut(s)	235
MroXI	GAANNNNTTC	1 cut(s)	1419
MseI	TTAA	6 cut(s)	294, 564, 581, 1212, 1449, 1746
MslI	CAYNNNNRTG	2 cut(s)	759, 1257
MspA1I	CMGCKG	3 cut(s)	15, 962, 1550
MspI	CCGG	6 cut(s)	52, 89, 147, 236, 332, 1225
MspR9I	CCNGG	3 cut(s)	52, 148, 701
MvaI	CCWGG	1 cut(s)	701
MvnI	CGCG	1 cut(s)	706
MwoI	GCNNNNNNNGC	8 cut(s)	40, 152, 307, 328, 434, 443, 1439, 1556
NaeI	GCCGGC	1 cut(s)	237
NarI	GGCGCC	1 cut(s)	63
NciI	CCSGG	2 cut(s)	52, 148
NgoMIV	GCCGGC	1 cut(s)	235
NlaIII	CATG	9 cut(s)	263, 521, 671, 871, 928, 1472, 1484, 1670, 1814
NlaIV	GGNNCC	4 cut(s)	19, 50, 64, 240
NmuCI	GTSAC	4 cut(s)	787, 835, 1571, 2005
NsiI	ATGCAT	1 cut(s)	1435
NspI	RCATGY	1 cut(s)	1472
NspV	TTCGAA	1 cut(s)	1949
PagI	TCATGA	2 cut(s)	1480, 1810
PaqCI	CACCTGC	1 cut(s)	887
PciI	ACATGT	1 cut(s)	1468
PcsI	WCGNNNNNNNCGW	1 cut(s)	1590
PdiI	GCCGGC	1 cut(s)	237
PdmI	GAANNNNTTC	1 cut(s)	1419
Pfl23II	CGTACG	1 cut(s)	225
PflMI	CCANNNNNTGG	1 cut(s)	1138
PkrI	GCNGC	8 cut(s)	30, 33, 189, 192, 197, 427, 597, 964
PleI	GAGTC	1 cut(s)	1648
PluTI	GGCGCC	1 cut(s)	66
PpsI	GAGTC	1 cut(s)	1648
PpuMI	RGGWCCY	1 cut(s)	48
PscI	ACATGT	1 cut(s)	1468
PshBI	ATTAAT	1 cut(s)	1212
Psp5II	RGGWCCY	1 cut(s)	48
Psp6I	CCWGG	1 cut(s)	699
PspGI	CCWGG	1 cut(s)	699
PspLI	CGTACG	1 cut(s)	225
PspN4I	GGNNCC	4 cut(s)	19, 50, 64, 240
PspPI	GGNCC	3 cut(s)	48, 263, 344
PspPPI	RGGWCCY	1 cut(s)	48
PsuI	RGATCY	2 cut(s)	1027, 1625
PvuII	CAGCTG	2 cut(s)	962, 1550
RsaI	GTAC	2 cut(s)	227, 381
RsaNI	GTAC	2 cut(s)	226, 380
RseI	CAYNNNNRTG	2 cut(s)	759, 1257
SaqAI	TTAA	6 cut(s)	294, 564, 581, 1212, 1449, 1746
SatI	GCNGC	8 cut(s)	29, 32, 188, 191, 196, 426, 596, 963
Sau96I	GGNCC	3 cut(s)	48, 263, 344
SchI	GAGTC	1 cut(s)	1649
ScrFI	CCNGG	3 cut(s)	52, 148, 701
SduI	GDGCHC	3 cut(s)	45, 398, 1252
SfaNI	GCATC	6 cut(s)	412, 1036, 1357, 1420, 1429, 1442
SfcI	CTRYAG	1 cut(s)	1308
SfoI	GGCGCC	1 cut(s)	64
SfuI	TTCGAA	1 cut(s)	1949
SinI	GGWCC	2 cut(s)	48, 263
SmiMI	CAYNNNNRTG	2 cut(s)	759, 1257
Sse9I	AATT	7 cut(s)	325, 494, 578, 641, 1234, 1934, 1942
SsiI	CCGC	7 cut(s)	15, 32, 196, 376, 426, 856, 1370
SspDI	GGCGCC	1 cut(s)	62
SspI	AATATT	1 cut(s)	1178
SspMI	CTAG	1 cut(s)	1797
StyD4I	CCNGG	3 cut(s)	50, 146, 699
StyI	CCWWGG	2 cut(s)	21, 66
TaaI	ACNGT	7 cut(s)	178, 221, 384, 473, 914, 999, 1928
TaiI	ACGT	1 cut(s)	207
TaqI	TCGA	7 cut(s)	180, 216, 340, 555, 1949, 2021, 2074
TasI	AATT	7 cut(s)	325, 494, 578, 641, 1234, 1934, 1942
TauI	GCSGC	3 cut(s)	34, 198, 428
Tru1I	TTAA	6 cut(s)	294, 564, 581, 1212, 1449, 1746
Tru9I	TTAA	6 cut(s)	294, 564, 581, 1212, 1449, 1746
TscAI	CASTG	1 cut(s)	2014
TseFI	GTSAC	4 cut(s)	787, 835, 1571, 2005
TseI	GCWGC	5 cut(s)	28, 187, 190, 595, 962
Tsp45I	GTSAC	4 cut(s)	787, 835, 1571, 2005
TspGWI	ACGGA	3 cut(s)	231, 477, 706
TspRI	CASTG	1 cut(s)	2014
Van91I	CCANNNNNTGG	1 cut(s)	1138
VpaK11BI	GGWCC	2 cut(s)	48, 263
VspI	ATTAAT	1 cut(s)	1212
XapI	RAATTY	2 cut(s)	494, 1934
XceI	RCATGY	1 cut(s)	1472
XmnI	GAANNNNTTC	1 cut(s)	1419
XspI	CTAG	1 cut(s)	1797
Zsp2I	ATGCAT	1 cut(s)	1435

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.