AT1G12290

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
4177917 .. 4182593
4677 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G12290.4

Sequence Viewer

Length: 2655 bp
ATGGGTGGTTGTGTCTCTGTCCAAGTATCATGCGATCAATTGTTGAACCATCTAGGTAGATGCTTTTGCAGAAAACTTTATTATATTCAAAATATAAAGGAGAATCTCACTTCTTTGGAGGAAGCCATGGAAGATCTCAAGGCATTGAGAGATGATCTGCTACGTAAGGTGCAGACAGCAGAAGAAGGAGGTCTACAAAGGCTTCATCAAATCAAGGTATGGCTTAAGAGAGTCAAGACTATCGAATCCCAATTCAATGATCTAGATAGTAGTAGAACTGTTGAACTTCAAAGGTTGTGTTGTTGTGGTGTTGGCTCGAGAAACTTAAGATTGAGCTATGACTATGGAAGAAGGGTCTTCTTGATGTTGAATATAGTTGAAGACTTAAAATCTAAAGGGATTTTTGAAGAGGTGGCTCATCCAGCTACGAGAGCTGTGGGGGAGGAAAGGCCTCTACAACCAACGATTGTTGGTCAGGAAACAATTTTAGAAAAGGCATGGGACCACCTCATGGATGATGGAACTAAGATTATGGGTCTCTATGGCATGGGTGGAGTAGGAAAAACAACCCTTCTCACTCAGATCAACAATAGGTTTTGTGACACCGATGATGGCGTTGAAATTGTCATTTGGGTTGTGGTATCTGGTGATCTACAAATCCACAAGATACAAAAAGAGATTGGCGAAAAAATAGGATTTATAGGCGTGGAATGGAACCAGAAAAGTGAAAACCAAAAGGCAGTCGATATACTCAATTTTCTAAGCAAAAAGAGATTTGTGTTGCTTTTGGATGACATATGGAAGAGGGTGGAACTAACTGAGATTGGAATCCCGAATCCAACAAGTGAAAACGGATGCAAAATAGCATTCACCACTCGCTGTCAAAGTGTTTGTGCGAGCATGGGAGTTCATGATCCGATGGAAGTCCGGTGTTTAGGTGCAGATGATGCGTGGGATTTGTTCAAGAAAAAAGTTGGAGATATCACATTAAGCAGCCACCCTGACATTCCCGAAATCGCAAGAAAAGTTGCTCAAGCATGTTGTGGTTTGCCGCTAGCGCTAAACGTCATTGGAGAGACAATGGCATGTAAGAAGACAACGCAAGAATGGGATCGTGCAGTAGATGTCTCAACAACATATGCTGCAAATTTTGGTGCTGTAAAGGAGAGGATTCTTCCTATTTTGAAGTACAGCTATGATAATCTGGAAAGTGAGAGTGTTAAAACTTGTTTCCTATATTGCTCTCTGTTTCCCGAAGATGATTTAATAGAAAAAGAGAGGCTGATAGATTATTGGATATGCGAGGGATTCATTGATGGAGATGAAAATAAAAAAGGAGCGGTGGGTGAAGGCTATGAGATACTCGGTACTCTTGTTTGTGCCTCTTTGTTGGTGGAGGGAGGAAAGTTCAACAATAAGTCATATGTGAAAATGCATGATGTGGTACGTGAGATGGCCCTGTGGATAGCATCTGACCTAAGGAAGCATAAAGATAATTGTATTGTTCGAGCCGGTTTTAGGTTAAACGAAATACCAAAGGTCAAGGATTGGAAAGTTGTGAGTAGGATGTCACTGGTGAATAACAGGATTAAAGAGATACATGGCAGTCCTGAGTGTCCTAAACTTACAACTTTGTTCCTGCAGGATAACCGCCATCTGGTAAATATCTCCGGGGAATTCTTCAGGTCTATGCCAAGGCTAGTTGTTTTGGATCTATCATGGAATGTCAATCTCAGTGGGTTACCGGATCAAATATCAGAGTTGGTTTCATTACGATATCTTGACTTGTCATATTCGAGCATAGGGAGATTGCCAGTTGGTTTATTAAAGTTGAAAAAGCTGATGCATCTGAATCTAGAGTCAATGTTGTGCCTTGAGAGTGTTTCAGGGATTGATCATTTGTCGAATCTGAAGACGGTGAGGCTACTAAATTTAAGAATGTGGCTAACTATAAGCTTACTGGAGGAGCTGGAACGTTTGGAGAATTTAGAAGTTCTAACCATAGAGATCATATCAAGTTCAGCATTGGAACAACTGTTATGCTCTCACAGGTTGGTGAGATGTCTTCAAAAGGTATCTGTTAAATACCTCGACGAAGAATCAGTCAGAATATTGACTTTGCCATCTATAGGTGATCTCCGGGAAGTCTTCATAGGGGGATGTGGAATGCGGGATATAATTATAGAAAGGAACACAAGTCTGACAAGCCCATGCTTTCCAAATCTATCCAAAGTTTTGATAACTGGTTGCAATGGTCTTAAGGATTTGACGTGGTTGTTGTTTGCTCCTAACCTCACTCATCTCAATGTTTGGAACTCACGCCAAATAGAAGAAATAATAAGCCAAGAGAAAGCTTCCACAGCTGATATTGTTCCTTTTCGGAAACTAGAATATCTGCACTTGTGGGATTTACCTGAACTGAAGAGCATATATTGGAATCCTTTGCCTTTTCCATGTCTGAATCAGATCAATGTACAAAATAAGTGTCGAAAGCTGACAAAGCTTCCATTGGATTCTCAAAGTTGCATTGTGGCGGGTGAAGAACTTGTCATACAATATGGAGATGAAGAATGGAAGGAAAGGGTCGAGTGGGAGGACAAAGCCACAAGACTCCGTTTCTTACCGTCATGCAAGTTGGTTTTGTGTAATCGATAA

Protein Analysis

884

Amino Acids

100.5

Weight (kDa)

6.08

Isoelectric Point (pI)

42.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 118 - 286 1.2e-51 NB-ARC domain
WHD_DRP PF23559 374 - 444 5.2e-12 Disease resistance protein Winged helix domain
LRR_14 PF23598 487 - 791 1.2e-16 Leucine-rich repeat region
LRR_8 PF13855 498 - 557 1.8e-11 Leucine rich repeat
LRR_RPS2 PF23247 685 - 793 4.3e-09 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000363)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G12210 AT1G12210 AT1G12210 AT1G12220 AT1G12220 AT1G12220 AT1G12280 AT1G12280 AT1G12290 AT1G12290 AT1G12290 AT1G12290 AT1G15890 AT1G15890 AT1G51480 AT1G52660 AT1G52660 AT1G61180 AT1G61180 AT1G61190 AT1G61190 AT1G61190 AT1G61190 AT1G61300 AT1G61300 AT1G61310 AT3G15700 AT3G15700 AT4G10780 AT4G10780 AT5G43730 AT5G43730 AT5G43730 AT5G43730 AT5G43730 AT5G43740 AT5G43740 AT5G63020
fragaria_vesca FvH4_6g30050 FvH4_6g48220
malus_domestica MD09G1055800.v1.1 MD09G1198800.v1.1 MD17G1204800.v1.1 MD17G1204900.v1.1 MD17G1205000.v1.1 MD17G1205300.v1.1 MD17G1205700.v1.1 MD17G1205800.v1.1 MD17G1224100.v1.1
prunus_persica Prupe.3G054800_v2.0.a1 Prupe.3G054800_v2.0.a1 Prupe.3G080300_v2.0.a1 Prupe.3G080400_v2.0.a1 Prupe.3G080500_v2.0.a1 Prupe.3G080600_v2.0.a1 Prupe.3G080800_v2.0.a1 Prupe.3G083200_v2.0.a1 Prupe.3G099800_v2.0.a1 Prupe.3G099800_v2.0.a1
pyrus_communis pycom17g20860 pycom17g20910 pycom17g22790
rosa_chinensis RchiOBHm_Chr2g0136891 RchiOBHm_Chr2g0136901 RchiOBHm_Chr2g0167711 RchiOBHm_Chr2g0167721 RchiOBHm_Chr2g0167731 RchiOBHm_Chr4g0407611
rosa_laevigata RLG00000018943 RLG00000019278 RLG00000019282 RLG00000019587 RLG00000021748 RLG00000021749 RLG00000031057
rosa_multiflora Rmu_sc0002143.1_g000003 Rmu_sc0002782.1_g000001 Rmu_sc0023879.1_g000001 Rmu_sc0042171.1_g000001
rosa_roxburghii Rroxscaffold_2G00083300 Rroxscaffold_2G00107890 Rroxscaffold_2G00116680
rosa_rugosa Rorug02G0271700 Rorug02G0334900 Rorug02G0531800 Rorug02G0531800
rosa_samantha Rh2AG359900 Rh2AG385100 Rh2AG600500 Rh2AG600600 Rh2BG392200 Rh2BG611000 Rh2BG611100 Rh2BG611200 Rh2CG343100 Rh2CG343300 Rh2CG372300 Rh2CG581400 Rh2CG581500 Rh2DG382900 Rh2DG623700 Rh5AG027500 Rh5CG029900
rosa_wichuraiana Rw2G031490 Rw2G049850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 511
AccBSI CCGCTC 1 cut(s) 1340
AccI GTMKAC 1 cut(s) 193
AciI CCGC 5 cut(s) 1052, 1340, 1651, 2170, 2534
AclI AACGTT 1 cut(s) 1975
AclWI GGATC 4 cut(s) 908, 1119, 1719, 1755
AcsI RAATTY 4 cut(s) 1147, 1676, 1930, 1984
AcuI CTGAAG 3 cut(s) 1666, 1931, 2441
AfaI GTAC 4 cut(s) 1190, 1369, 1446, 2475
AfeI AGCGCT 1 cut(s) 1059
AfiI CCNNNNNNNGG 4 cut(s) 511, 1518, 1657, 2129
AflII CTTAAG 3 cut(s) 224, 325, 2258
AjiI CACGTC 1 cut(s) 2271
Alw26I GTCTC 4 cut(s) 19, 542, 1070, 1132
AlwI GGATC 4 cut(s) 908, 1119, 1719, 1755
Ama87I CYCGRG 1 cut(s) 316
Aor51HI AGCGCT 1 cut(s) 1059
AoxI GGCC 2 cut(s) 449, 1455
ApeKI GCWGC 2 cut(s) 993, 1142
ApoI RAATTY 4 cut(s) 1147, 1676, 1930, 1984
ArsI GACNNNNNNTTYG 4 cut(s) 2088, 2120, 2470, 2502
AspLEI GCGC 1 cut(s) 1060
AspS9I GGNCC 2 cut(s) 502, 1456
AsuC2I CCSGG 2 cut(s) 1672, 2141
AsuHPI GGTGA 8 cut(s) 659, 862, 1358, 1588, 1930, 2068, 2144, 2549
AsuNHI GCTAGC 1 cut(s) 1054
AvaI CYCGRG 1 cut(s) 316
AvaII GGWCC 1 cut(s) 502
AxyI CCTNAGG 1 cut(s) 1478
BaeI ACNNNNGTAYC 2 cut(s) 1359, 1392
BarI GAAGNNNNNNTAC 2 cut(s) 177, 209
BbsI GAAGAC 6 cut(s) 349, 387, 1100, 1919, 2057, 2140
BbvI GCAGC 2 cut(s) 1005, 1129
BccI CCATC 8 cut(s) 57, 512, 605, 913, 1310, 1447, 1662, 2131
BclI TGATCA 1 cut(s) 1894
BcnI CCSGG 2 cut(s) 1672, 2141
BcoDI GTCTC 4 cut(s) 19, 542, 1070, 1132
BfaI CTAG 6 cut(s) 53, 263, 1055, 1700, 1856, 2387
BfmI CTRYAG 2 cut(s) 1640, 2127
BfoI RGCGCY 1 cut(s) 1061
BfrI CTTAAG 3 cut(s) 224, 325, 2258
BglII AGATCT 1 cut(s) 133
BisI GCNGC 3 cut(s) 994, 1052, 1143
BlsI GCNGC 3 cut(s) 995, 1053, 1144
Bme1390I CCNGG 2 cut(s) 1672, 2141
Bme18I GGWCC 1 cut(s) 502
BmeT110I CYCGRG 1 cut(s) 316
BmgBI CACGTC 1 cut(s) 2271
BmgT120I GGNCC 2 cut(s) 502, 1456
BmiI GGNNCC 2 cut(s) 503, 716
BmrFI CCNGG 2 cut(s) 1672, 2141
BmsI GCATC 6 cut(s) 50, 845, 937, 1478, 1833, 1855
BmtI GCTAGC 1 cut(s) 1058
BpiI GAAGAC 6 cut(s) 349, 387, 1100, 1919, 2057, 2140
BpmI CTGGAG 1 cut(s) 1982
BpuEI CTTGAG 3 cut(s) 122, 1017, 1895
BpuMI CCSGG 2 cut(s) 1672, 2141
Bsa29I ATCGAT 1 cut(s) 2650
BsaAI YACGTR 2 cut(s) 164, 1448
BsaBI GATNNNNATC 1 cut(s) 827
BsaI GGTCTC 1 cut(s) 542
BsaJI CCNNGG 3 cut(s) 126, 1671, 1694
BsaWI WCCGGW 2 cut(s) 927, 1744
Bsc4I CCNNNNNNNGG 4 cut(s) 511, 1518, 1657, 2129
Bse118I RCCGGY 1 cut(s) 1511
Bse1I ACTGG 4 cut(s) 1578, 1814, 1965, 2248
Bse21I CCTNAGG 1 cut(s) 1478
Bse3DI GCAATG 1 cut(s) 2257
Bse8I GATNNNNATC 1 cut(s) 827
BseCI ATCGAT 1 cut(s) 2650
BseDI CCNNGG 3 cut(s) 126, 1671, 1694
BseGI GGATG 6 cut(s) 418, 520, 796, 860, 1572, 2165
BseJI GATNNNNATC 1 cut(s) 827
BseLI CCNNNNNNNGG 4 cut(s) 511, 1518, 1657, 2129
BseMI GCAATG 1 cut(s) 2257
BseMII CTCAG 4 cut(s) 593, 810, 1602, 1747
BseNI ACTGG 4 cut(s) 1578, 1814, 1965, 2248
BseRI GAGGAG 1 cut(s) 1979
BseXI GCAGC 2 cut(s) 1005, 1129
BsgI GTGCAG 4 cut(s) 191, 960, 1137, 2381
BshFI GGCC 2 cut(s) 451, 1457
BshVI ATCGAT 1 cut(s) 2650
BsiHKCI CYCGRG 1 cut(s) 316
BsiSI CCGG 5 cut(s) 928, 1512, 1671, 1745, 2140
BslFI GGGAC 1 cut(s) 515
BslI CCNNNNNNNGG 4 cut(s) 511, 1518, 1657, 2129
BsmAI GTCTC 4 cut(s) 19, 542, 1070, 1132
BsmFI GGGAC 1 cut(s) 515
BsmI GAATGC 2 cut(s) 866, 2172
BsnI GGCC 2 cut(s) 451, 1457
Bso31I GGTCTC 1 cut(s) 542
BsoBI CYCGRG 1 cut(s) 316
Bsp1407I TGTACA 1 cut(s) 2473
Bsp19I CCATGG 1 cut(s) 126
BspACI CCGC 5 cut(s) 1052, 1340, 1651, 2170, 2534
BspANI GGCC 2 cut(s) 451, 1457
BspCNI CTCAG 4 cut(s) 592, 811, 1603, 1746
BspDI ATCGAT 1 cut(s) 2650
BspHI TCATGA 1 cut(s) 910
BspLI GGNNCC 2 cut(s) 503, 716
BspMAI CTGCAG 1 cut(s) 1644
BspOI GCTAGC 1 cut(s) 1058
BspPI GGATC 4 cut(s) 908, 1119, 1719, 1755
BspQI GCTCTTC 1 cut(s) 2417
BspTI CTTAAG 3 cut(s) 224, 325, 2258
BspTNI GGTCTC 1 cut(s) 542
BsrBI CCGCTC 1 cut(s) 1340
BsrDI GCAATG 1 cut(s) 2257
BsrFI RCCGGY 1 cut(s) 1511
BsrGI TGTACA 1 cut(s) 2473
BsrI ACTGG 4 cut(s) 1578, 1814, 1965, 2248
BssAI RCCGGY 1 cut(s) 1511
BssECI CCNNGG 3 cut(s) 126, 1671, 1694
BssT1I CCWWGG 2 cut(s) 126, 1694
Bst4CI ACNGT 4 cut(s) 280, 1918, 2037, 2625
Bst6I CTCTTC 3 cut(s) 402, 797, 2417
BstAFI CTTAAG 3 cut(s) 224, 325, 2258
BstAPI GCANNNNNTGC 1 cut(s) 947
BstAUI TGTACA 1 cut(s) 2473
BstBAI YACGTR 2 cut(s) 164, 1448
BstC8I GCNNGC 2 cut(s) 898, 1056
BstDEI CTNAG 7 cut(s) 525, 579, 761, 819, 1478, 1611, 1733
BstDSI CCRYGG 1 cut(s) 126
BstEII GGTNACC 1 cut(s) 1740
BstF5I GGATG 6 cut(s) 418, 520, 796, 860, 1572, 2165
BstH2I RGCGCY 1 cut(s) 1061
BstHHI GCGC 1 cut(s) 1060
BstMAI GTCTC 4 cut(s) 19, 542, 1070, 1132
BstMWI GCNNNNNNNGC 6 cut(s) 422, 431, 947, 1057, 2360, 2500
BstNSI RCATGY 2 cut(s) 1041, 1089
BstPI GGTNACC 1 cut(s) 1740
BstSCI CCNGG 2 cut(s) 1670, 2139
BstSFI CTRYAG 2 cut(s) 1640, 2127
BstSNI TACGTA 1 cut(s) 164
BstV1I GCAGC 2 cut(s) 1005, 1129
BstV2I GAAGAC 6 cut(s) 349, 387, 1100, 1919, 2057, 2140
BstX2I RGATCY 2 cut(s) 133, 1711
BstYI RGATCY 2 cut(s) 133, 1711
Bsu15I ATCGAT 1 cut(s) 2650
Bsu36I CCTNAGG 1 cut(s) 1478
BsuRI GGCC 2 cut(s) 451, 1457
BsuTUI ATCGAT 1 cut(s) 2650
BtgI CCRYGG 1 cut(s) 126
BtrI CACGTC 1 cut(s) 2271
BtsCI GGATG 6 cut(s) 418, 520, 796, 860, 1572, 2165
BtsIMutI CAGTG 2 cut(s) 1571, 1741
Cac8I GCNNGC 2 cut(s) 898, 1056
CciI TCATGA 1 cut(s) 910
CfoI GCGC 1 cut(s) 1060
Cfr10I RCCGGY 1 cut(s) 1511
Cfr13I GGNCC 2 cut(s) 502, 1456
ClaI ATCGAT 1 cut(s) 2650
Csp6I GTAC 4 cut(s) 1189, 1368, 1445, 2474
CspCI CAANNNNNGTGG 2 cut(s) 1717, 1752
CviQI GTAC 4 cut(s) 1189, 1368, 1445, 2474
DdeI CTNAG 7 cut(s) 525, 579, 761, 819, 1478, 1611, 1733
Eam1104I CTCTTC 3 cut(s) 402, 797, 2417
EarI CTCTTC 3 cut(s) 402, 797, 2417
Eco105I TACGTA 1 cut(s) 164
Eco130I CCWWGG 2 cut(s) 126, 1694
Eco147I AGGCCT 1 cut(s) 451
Eco31I GGTCTC 1 cut(s) 542
Eco32I GATATC 2 cut(s) 982, 1778
Eco47I GGWCC 1 cut(s) 502
Eco47III AGCGCT 1 cut(s) 1059
Eco57I CTGAAG 3 cut(s) 1666, 1931, 2441
Eco81I CCTNAGG 1 cut(s) 1478
Eco88I CYCGRG 1 cut(s) 316
Eco91I GGTNACC 1 cut(s) 1740
EcoO65I GGTNACC 1 cut(s) 1740
EcoRI GAATTC 1 cut(s) 1676
EcoRV GATATC 2 cut(s) 982, 1778
EcoT14I CCWWGG 2 cut(s) 126, 1694
EcoT22I ATGCAT 2 cut(s) 1437, 1848
ErhI CCWWGG 2 cut(s) 126, 1694
FaqI GGGAC 1 cut(s) 515
FauI CCCGC 2 cut(s) 2163, 2527
FauNDI CATATG 3 cut(s) 797, 1138, 1423
FbaI TGATCA 1 cut(s) 1894
FblI GTMKAC 1 cut(s) 193
Fnu4HI GCNGC 3 cut(s) 994, 1052, 1143
FokI GGATG 6 cut(s) 405, 527, 803, 867, 1579, 2172
Fsp4HI GCNGC 3 cut(s) 994, 1052, 1143
FspBI CTAG 6 cut(s) 53, 263, 1055, 1700, 1856, 2387
GlaI GCGC 1 cut(s) 1059
GluI GCNGC 3 cut(s) 994, 1052, 1143
GsuI CTGGAG 1 cut(s) 1982
HaeII RGCGCY 1 cut(s) 1061
HaeIII GGCC 2 cut(s) 451, 1457
HapII CCGG 5 cut(s) 928, 1512, 1671, 1745, 2140
HhaI GCGC 1 cut(s) 1060
Hin6I GCGC 1 cut(s) 1058
HinP1I GCGC 1 cut(s) 1058
HindIII AAGCTT 3 cut(s) 1954, 2352, 2501
HpaII CCGG 5 cut(s) 928, 1512, 1671, 1745, 2140
HphI GGTGA 8 cut(s) 659, 862, 1358, 1588, 1930, 2068, 2144, 2549
Hpy166II GTNNAC 1 cut(s) 194
Hpy8I GTNNAC 1 cut(s) 194
Hpy99I CGWCG 1 cut(s) 2096
HpyAV CCTTC 5 cut(s) 179, 345, 581, 1343, 2569
HpyCH4III ACNGT 4 cut(s) 280, 1918, 2037, 2625
HpyCH4IV ACGT 5 cut(s) 163, 1065, 1447, 1975, 2270
HpyF10VI GCNNNNNNNGC 6 cut(s) 422, 431, 947, 1057, 2360, 2500
HpyF3I CTNAG 7 cut(s) 525, 579, 761, 819, 1478, 1611, 1733
HpySE526I ACGT 5 cut(s) 163, 1065, 1447, 1975, 2270
HspAI GCGC 1 cut(s) 1058
Ksp22I TGATCA 1 cut(s) 1894
LguI GCTCTTC 1 cut(s) 2417
LmnI GCTCC 3 cut(s) 1337, 1966, 2290
Lsp1109I GCAGC 2 cut(s) 1005, 1129
LweI GCATC 6 cut(s) 50, 845, 937, 1478, 1833, 1855
MaeI CTAG 6 cut(s) 53, 263, 1055, 1700, 1856, 2387
MaeII ACGT 5 cut(s) 163, 1065, 1447, 1975, 2270
MaeIII GTNAC 3 cut(s) 599, 1569, 1740
MbiI CCGCTC 1 cut(s) 1340
MfeI CAATTG 1 cut(s) 38
MflI RGATCY 2 cut(s) 133, 1711
MlyI GAGTC 3 cut(s) 240, 1868, 2604
MmeI TCCRAC 2 cut(s) 863, 955
Mph1103I ATGCAT 2 cut(s) 1437, 1848
MslI CAYNNNNRTG 1 cut(s) 2304
MspA1I CMGCKG 1 cut(s) 2363
MspCI CTTAAG 3 cut(s) 224, 325, 2258
MspI CCGG 5 cut(s) 928, 1512, 1671, 1745, 2140
MspR9I CCNGG 2 cut(s) 1672, 2141
MunI CAATTG 1 cut(s) 38
Mva1269I GAATGC 2 cut(s) 866, 2172
MwoI GCNNNNNNNGC 6 cut(s) 422, 431, 947, 1057, 2360, 2500
NciI CCSGG 2 cut(s) 1672, 2141
NcoI CCATGG 1 cut(s) 126
NdeI CATATG 3 cut(s) 797, 1138, 1423
NheI GCTAGC 1 cut(s) 1054
NlaIV GGNNCC 2 cut(s) 503, 716
NmuCI GTSAC 2 cut(s) 599, 1569
NsiI ATGCAT 2 cut(s) 1437, 1848
NspI RCATGY 2 cut(s) 1041, 1089
PaeR7I CTCGAG 1 cut(s) 316
PagI TCATGA 1 cut(s) 910
PceI AGGCCT 1 cut(s) 451
PciSI GCTCTTC 1 cut(s) 2417
PctI GAATGC 2 cut(s) 866, 2172
PflMI CCANNNNNTGG 1 cut(s) 511
PfoI TCCNGGA 1 cut(s) 2139
PkrI GCNGC 3 cut(s) 995, 1053, 1144
PleI GAGTC 3 cut(s) 239, 1867, 2604
PpsI GAGTC 3 cut(s) 239, 1867, 2604
Ppu21I YACGTR 2 cut(s) 164, 1448
Psp1406I AACGTT 1 cut(s) 1975
PspEI GGTNACC 1 cut(s) 1740
PspN4I GGNNCC 2 cut(s) 503, 716
PspPI GGNCC 2 cut(s) 502, 1456
PsrI GAACNNNNNNTAC 2 cut(s) 2535, 2567
PstI CTGCAG 1 cut(s) 1644
PsuI RGATCY 2 cut(s) 133, 1711
PvuII CAGCTG 1 cut(s) 2363
RsaI GTAC 4 cut(s) 1190, 1369, 1446, 2475
RsaNI GTAC 4 cut(s) 1189, 1368, 1445, 2474
RseI CAYNNNNRTG 1 cut(s) 2304
SapI GCTCTTC 1 cut(s) 2417
SatI GCNGC 3 cut(s) 994, 1052, 1143
Sau96I GGNCC 2 cut(s) 502, 1456
SbfI CCTGCAGG 1 cut(s) 1644
SchI GAGTC 3 cut(s) 240, 1868, 2604
ScrFI CCNGG 2 cut(s) 1672, 2141
SdaI CCTGCAGG 1 cut(s) 1644
SfaNI GCATC 6 cut(s) 50, 845, 937, 1478, 1833, 1855
SfcI CTRYAG 2 cut(s) 1640, 2127
Sfr274I CTCGAG 1 cut(s) 316
SinI GGWCC 1 cut(s) 502
SlaI CTCGAG 1 cut(s) 316
SmiMI CAYNNNNRTG 1 cut(s) 2304
SmlI CTYRAG 7 cut(s) 137, 224, 316, 325, 1032, 1874, 2258
SmoI CTYRAG 7 cut(s) 137, 224, 316, 325, 1032, 1874, 2258
SnaBI TACGTA 1 cut(s) 164
Sse8387I CCTGCAGG 1 cut(s) 1644
SseBI AGGCCT 1 cut(s) 451
SsiI CCGC 5 cut(s) 1052, 1340, 1651, 2170, 2534
SspI AATATT 1 cut(s) 2112
SspMI CTAG 6 cut(s) 53, 263, 1055, 1700, 1856, 2387
StuI AGGCCT 1 cut(s) 451
StyD4I CCNGG 2 cut(s) 1670, 2139
StyI CCWWGG 2 cut(s) 126, 1694
TaaI ACNGT 4 cut(s) 280, 1918, 2037, 2625
TaiI ACGT 5 cut(s) 166, 1068, 1450, 1978, 2273
TatI WGTACW 2 cut(s) 1188, 2473
TauI GCSGC 1 cut(s) 1054
TscAI CASTG 2 cut(s) 1578, 1741
TseFI GTSAC 2 cut(s) 599, 1569
TseI GCWGC 2 cut(s) 993, 1142
Tsp45I GTSAC 2 cut(s) 599, 1569
TspDTI ATGAA 7 cut(s) 194, 899, 1300, 1338, 1758, 2140, 2580
TspGWI ACGGA 2 cut(s) 867, 2603
TspRI CASTG 2 cut(s) 1578, 1741
Van91I CCANNNNNTGG 1 cut(s) 511
Vha464I CTTAAG 3 cut(s) 224, 325, 2258
VpaK11BI GGWCC 1 cut(s) 502
XapI RAATTY 4 cut(s) 1147, 1676, 1930, 1984
XbaI TCTAGA 2 cut(s) 262, 1855
XceI RCATGY 2 cut(s) 1041, 1089
XhoI CTCGAG 1 cut(s) 316
XmiI GTMKAC 1 cut(s) 193
XspI CTAG 6 cut(s) 53, 263, 1055, 1700, 1856, 2387
Zsp2I ATGCAT 2 cut(s) 1437, 1848
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.