Rw2G031490

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
51634368 .. 51638808
4441 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G031490.1

Sequence Viewer

Length: 2460 bp
ATGGCTGGCATCTTGTCAATCAATTTGTCGTCTGATGCCTTCGTTTCTCGCTGCTGGGATTCCCTCGTTGGAAGACAACATTATGTCAGCAAGCTCCAGAAAAACCTTGTAGGTTTGACTACGTCTTTAGAAGAACTGAAGTGTTTAAAGAATGATGTAAAGAGAAAGGTTGAGGTTTCTGAGCAGCAGCCACACATGAAGCGGCTAGAACAGGTACAGATCTGGATTGTGAAAGTGGAAACTATGGAGACTCAAGTCCACGAAGTTCTCAATGCTAGAATTCAAGAAACTGAGAAACTGTGCTGTGGAGGTTGCTGTTCAAAGAACTATATTTCCAGCTACAGGTATGGGAAAAAAGTGGTTAAGAAGTTGCTAGAAATCACTGCTTTAAAGGAGGCCGGATTTTTTCAAGAGGTAGCCAAGAGGTTACCTGCGCCCTTAGTCAGTCAAAGACCTATTGAGCCAATTGTGGGCATGGAATCCATGTTTGATAAGGTTTGGAGCCACATAGAAGATGAAGAGGTGGGAGTGATTGGCTTGTATGAAATGGGAAGGGTGGGGAAGACCGCCCTTCTTACCAAGATCAATAACAACTTCCTCCACAGCACTAATGATTTCAATCTTGTGATCTGGATCGTGGTCTCCAAGGACTTCAAGCTTGACAACATTCAAAACAAGATTGGTGAGAAGATTGGGTTTTCGGATGAGACATGGAAGCTTGAAATCACCAAAATTGGAGTTCCATTTCCTGATAAACACAACAAGTGCAAAGTACTCTTCACCACGCGTTCTGAGGACGTTTGCGGTCTTATGGATGCTCATGTGAAGATTAAAGTGGAGTGTTTGGCATCGGAAAAAGCATGGACCTTGTTTCAACAGAAAGTTGGAAAAGAAGCTCTTCTAGTTCATCAAGATATCCCTAGACTAGCTGAGATTGTGGCAAAAGAGTGTGGCGGCTTGCCACTTGCATTAATTACGGTTGAATGGGATCATGCAATTCAAGTTCTCAAGAAATCCGCATCAGAGTTCTCTGGTATGGAAGATAAGGTGCTCCGTCTTTTGAAATTCAGTTATGATAGTTTACCATCAGAGAAAGTTAGATCATGCTTCTTATATTGTGCTTTATTTCCAGAAGATTTTCTAATACCTAAAGATACTTTATTAAACTGTTGGATGGCTGAGGAAATGTGGGATGAACATGCTAATGTACATGAAGGACGAAGTGAAAGTTACCATATTATAGGTGTTCTTCTTAATGTATGTTTGTTGGAAGAATATAAAGGAAACTTTGTGAAAATGCATGATGTCATCCGCGACATGGCGTTGTGGTTGGCTTGTGATCCTGCTAAAACAAACGAAGGTTTCCTATTGCATGCAGGTGCAGATTTGATTGAAGCACCCAATGTTGGAAAATGGAAGAGCATGAAAAGAATATCTTTGATGTCTAATCGCATGGAGCATCTAGATGAAACACCGAATTCTCCTAGTTTGTTGACCTTTTTAAAAGTTTTGGATTTGTCAGACAATAAGGATCTAACGCGGTTGCCATGTGGAGTTTCAAACCTTGTTTCATTGCAGCATCTGAATTTGCCAGAAACTGGTATAAAAGAGTTGTCAGAGGAGATAAAGAACTTATCAAAGCTAAAATATTTGAACTTGGAGTTTACGGGGCAACTTGATTCTGTTCCACCAAATTTTATATCAAGTTTTCCCATGCTGAAAGTTTTGAGAATGTTCAAATGTGGTTCTTCTGACAAAATTTTTTTGAAGGTTTTGAAACACTTTGAAGTGTTGACTTTGAGCATTCGAAGTACAGCTTGCTTCTGCAAGTTTCTCCAGTACCACAGGTTGGTGACCTGCACTGAAGCTCTTCTTCTCATGGATCCAAAAAACCATTCGAGCTTTCTTGATTTAACATCTCTGCTGGACATGAAAAATCTTGATTTGCTTCAAATTTCTGAGTATCCAAATTTGAAAGAAATAGACATTGATTGGGCAGGAGCAAATGATGATCCTCGGAACTCAATCATGACAAACCAAAGTTGCTACATTGCTCTTCAACACGAATCTGTAAGCTCTTGCTTCCAATTGAATGATATGACATGGCTCATTTTTGCTCAAAATCTCATCAGATTATATGTATATGGCTGCTCCGGAATGCGGGAAATAATCAGTTCTCAAAGATTGGGTGCACATGTTGTAAGAGACATGAAACCATTTGCAAAACTTTCATACATATATAGAAGTGCACTGCCATTTCCATATCTGAGTGAAATCAGAATATCTGGATGTCCAGCACTTAAAGAGTTGCCACTGAATTCCAGCAGTGCCCGAGGATGTAATCTCATCATCCAAGGAGAGGAATGGTGGTGGAATCGCTTACAATGGCCAAATGAAGATGCTCGAAATGCTTTCCTCCCCTGCTTCAGACATCGTAGTAGTAATCAGGTTCTTCCATGA

Protein Analysis

819

Amino Acids

93.46

Weight (kDa)

6.75

Isoelectric Point (pI)

41.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 160 - 239 2.3e-13 NB-ARC domain
NB-ARC PF00931 235 - 298 6.5e-16 NB-ARC domain
WHD_DRP PF23559 375 - 441 1.3e-06 Disease resistance protein Winged helix domain
LRR_14 PF23598 499 - 598 2e-09 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000363)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G12210 AT1G12210 AT1G12210 AT1G12220 AT1G12220 AT1G12220 AT1G12280 AT1G12280 AT1G12290 AT1G12290 AT1G12290 AT1G12290 AT1G15890 AT1G15890 AT1G51480 AT1G52660 AT1G52660 AT1G61180 AT1G61180 AT1G61190 AT1G61190 AT1G61190 AT1G61190 AT1G61300 AT1G61300 AT1G61310 AT3G15700 AT3G15700 AT4G10780 AT4G10780 AT5G43730 AT5G43730 AT5G43730 AT5G43730 AT5G43730 AT5G43740 AT5G43740 AT5G63020
fragaria_vesca FvH4_6g30050 FvH4_6g48220
malus_domestica MD09G1055800.v1.1 MD09G1198800.v1.1 MD17G1204800.v1.1 MD17G1204900.v1.1 MD17G1205000.v1.1 MD17G1205300.v1.1 MD17G1205700.v1.1 MD17G1205800.v1.1 MD17G1224100.v1.1
prunus_persica Prupe.3G054800_v2.0.a1 Prupe.3G054800_v2.0.a1 Prupe.3G080300_v2.0.a1 Prupe.3G080400_v2.0.a1 Prupe.3G080500_v2.0.a1 Prupe.3G080600_v2.0.a1 Prupe.3G080800_v2.0.a1 Prupe.3G083200_v2.0.a1 Prupe.3G099800_v2.0.a1 Prupe.3G099800_v2.0.a1
pyrus_communis pycom17g20860 pycom17g20910 pycom17g22790
rosa_chinensis RchiOBHm_Chr2g0136891 RchiOBHm_Chr2g0136901 RchiOBHm_Chr2g0167711 RchiOBHm_Chr2g0167721 RchiOBHm_Chr2g0167731 RchiOBHm_Chr4g0407611
rosa_laevigata RLG00000018943 RLG00000019278 RLG00000019282 RLG00000019587 RLG00000021748 RLG00000021749 RLG00000031057
rosa_multiflora Rmu_sc0002143.1_g000003 Rmu_sc0002782.1_g000001 Rmu_sc0023879.1_g000001 Rmu_sc0042171.1_g000001
rosa_roxburghii Rroxscaffold_2G00083300 Rroxscaffold_2G00107890 Rroxscaffold_2G00116680
rosa_rugosa Rorug02G0271700 Rorug02G0334900 Rorug02G0531800 Rorug02G0531800
rosa_samantha Rh2AG359900 Rh2AG385100 Rh2AG600500 Rh2AG600600 Rh2BG392200 Rh2BG611000 Rh2BG611100 Rh2BG611200 Rh2CG343100 Rh2CG343300 Rh2CG372300 Rh2CG581400 Rh2CG581500 Rh2DG382900 Rh2DG623700 Rh5AG027500 Rh5CG029900
rosa_wichuraiana Rw2G031490 Rw2G049850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1367
Acc36I ACCTGC 3 cut(s) 439, 1367, 1865
AccB7I CCANNNNNTGG 2 cut(s) 1598, 1849
AccII CGCG 3 cut(s) 787, 1314, 1540
AccIII TCCGGA 1 cut(s) 2153
AciI CCGC 8 cut(s) 202, 567, 804, 954, 1017, 1312, 1540, 2161
AclWI GGATC 7 cut(s) 641, 996, 1334, 1539, 1877, 1890, 2006
AcoI YGGCCR 1 cut(s) 2387
AcsI RAATTY 9 cut(s) 279, 1064, 1477, 1585, 1693, 1758, 1953, 1969, 2317
AcuI CTGAAG 3 cut(s) 158, 1884, 2410
AfaI GTAC 5 cut(s) 216, 774, 1209, 1813, 1841
AfiI CCNNNNNNNGG 8 cut(s) 342, 470, 1318, 1406, 1598, 1849, 2160, 2359
AflIII ACRYGT 2 cut(s) 785, 2194
AjuI GAANNNNNNNTTGG 2 cut(s) 1879, 1911
AloI GAACNNNNNNTCC 2 cut(s) 317, 349
Alw21I GWGCWC 3 cut(s) 1053, 2194, 2251
Alw26I GTCTC 4 cut(s) 242, 646, 701, 2199
Alw44I GTGCAC 2 cut(s) 2190, 2247
AlwI GGATC 7 cut(s) 641, 996, 1334, 1539, 1877, 1890, 2006
AlwNI CAGNNNCTG 2 cut(s) 1582, 1598
Ama87I CYCGRG 1 cut(s) 2331
Aor13HI TCCGGA 1 cut(s) 2153
AoxI GGCC 2 cut(s) 396, 2387
ApaLI GTGCAC 2 cut(s) 2190, 2247
ApeKI GCWGC 5 cut(s) 51, 184, 187, 1576, 2148
ApoI RAATTY 9 cut(s) 279, 1064, 1477, 1585, 1693, 1758, 1953, 1969, 2317
AseI ATTAAT 1 cut(s) 971
Asp700I GAANNNNTTC 3 cut(s) 897, 1137, 1869
AspLEI GCGC 1 cut(s) 436
AspS9I GGNCC 1 cut(s) 864
AsuHPI GGTGA 4 cut(s) 695, 718, 772, 1864
AsuII TTCGAA 1 cut(s) 1807
AvaI CYCGRG 1 cut(s) 2331
AvaII GGWCC 1 cut(s) 864
BaeGI GKGCMC 3 cut(s) 2194, 2251, 2332
BalI TGGCCA 1 cut(s) 2389
BamHI GGATCC 1 cut(s) 1882
BbsI GAAGAC 2 cut(s) 79, 569
Bbv12I GWGCWC 3 cut(s) 1053, 2194, 2251
BbvCI CCTCAGC 1 cut(s) 1179
BbvI GCAGC 5 cut(s) 38, 196, 199, 1588, 2135
BccI CCATC 2 cut(s) 1093, 1168
BciVI GTATCC 1 cut(s) 1974
BcoDI GTCTC 4 cut(s) 242, 646, 701, 2199
BfaI CTAG 8 cut(s) 206, 276, 374, 902, 921, 926, 1463, 1485
BfmI CTRYAG 1 cut(s) 340
BfuAI ACCTGC 3 cut(s) 439, 1367, 1865
BfuI GTATCC 1 cut(s) 1974
BglII AGATCT 1 cut(s) 219
BisI GCNGC 7 cut(s) 52, 185, 188, 203, 955, 1577, 2149
BlsI GCNGC 7 cut(s) 53, 186, 189, 204, 956, 1578, 2150
BmcAI AGTACT 1 cut(s) 774
Bme18I GGWCC 1 cut(s) 864
BmeT110I CYCGRG 1 cut(s) 2331
BmgT120I GGNCC 1 cut(s) 864
BmiI GGNNCC 2 cut(s) 503, 1884
BmsI GCATC 8 cut(s) 18, 25, 805, 857, 1028, 1468, 1588, 2389
BoxI GACNNNNGTC 1 cut(s) 254
BpiI GAAGAC 2 cut(s) 79, 569
BpmI CTGGAG 2 cut(s) 80, 1820
Bpu10I CCTNAGC 1 cut(s) 1179
Bpu14I TTCGAA 1 cut(s) 1807
BpuEI CTTGAG 2 cut(s) 237, 992
BsaBI GATNNNNATC 2 cut(s) 618, 632
BsaI GGTCTC 1 cut(s) 646
BsaJI CCNNGG 4 cut(s) 645, 2015, 2332, 2353
BsaWI WCCGGW 1 cut(s) 2153
Bsc4I CCNNNNNNNGG 8 cut(s) 342, 470, 1318, 1406, 1598, 1849, 2160, 2359
Bse1I ACTGG 2 cut(s) 1603, 1837
Bse3DI GCAATG 2 cut(s) 1571, 2049
Bse8I GATNNNNATC 2 cut(s) 618, 632
BseAI TCCGGA 1 cut(s) 2153
BseDI CCNNGG 4 cut(s) 645, 2015, 2332, 2353
BseGI GGATG 8 cut(s) 709, 820, 1179, 1198, 1308, 2294, 2342, 2349
BseJI GATNNNNATC 2 cut(s) 618, 632
BseLI CCNNNNNNNGG 8 cut(s) 342, 470, 1318, 1406, 1598, 1849, 2160, 2359
BseMI GCAATG 2 cut(s) 1571, 2049
BseMII CTCAG 7 cut(s) 171, 282, 783, 921, 1170, 1950, 2258
BseNI ACTGG 2 cut(s) 1603, 1837
BseRI GAGGAG 1 cut(s) 1634
BseSI GKGCMC 3 cut(s) 2194, 2251, 2332
BseXI GCAGC 5 cut(s) 38, 196, 199, 1588, 2135
BseYI CCCAGC 1 cut(s) 54
BsgI GTGCAG 2 cut(s) 1401, 1843
Bsh1236I CGCG 3 cut(s) 787, 1314, 1540
BshFI GGCC 2 cut(s) 398, 2389
BsiHKAI GWGCWC 3 cut(s) 1053, 2194, 2251
BsiHKCI CYCGRG 1 cut(s) 2331
BsiSI CCGG 2 cut(s) 399, 2154
BslI CCNNNNNNNGG 8 cut(s) 342, 470, 1318, 1406, 1598, 1849, 2160, 2359
BsmAI GTCTC 4 cut(s) 242, 646, 701, 2199
BsmI GAATGC 2 cut(s) 1803, 2163
BsnI GGCC 2 cut(s) 398, 2389
Bso31I GGTCTC 1 cut(s) 646
BsoBI CYCGRG 1 cut(s) 2331
Bsp119I TTCGAA 1 cut(s) 1807
Bsp1286I GDGCHC 4 cut(s) 1053, 2194, 2251, 2332
Bsp13I TCCGGA 1 cut(s) 2153
Bsp1407I TGTACA 1 cut(s) 1207
BspACI CCGC 8 cut(s) 202, 567, 804, 954, 1017, 1312, 1540, 2161
BspANI GGCC 2 cut(s) 398, 2389
BspCNI CTCAG 7 cut(s) 172, 283, 784, 922, 1171, 1951, 2259
BspEI TCCGGA 1 cut(s) 2153
BspFNI CGCG 3 cut(s) 787, 1314, 1540
BspHI TCATGA 1 cut(s) 2028
BspLI GGNNCC 2 cut(s) 503, 1884
BspMI ACCTGC 3 cut(s) 439, 1367, 1865
BspPI GGATC 7 cut(s) 641, 996, 1334, 1539, 1877, 1890, 2006
BspQI GCTCTTC 4 cut(s) 903, 1412, 1875, 2061
BspT104I TTCGAA 1 cut(s) 1807
BspTNI GGTCTC 1 cut(s) 646
BsrDI GCAATG 2 cut(s) 1571, 2049
BsrGI TGTACA 1 cut(s) 1207
BsrI ACTGG 2 cut(s) 1603, 1837
BssECI CCNNGG 4 cut(s) 645, 2015, 2332, 2353
BssT1I CCWWGG 2 cut(s) 645, 2353
Bst4CI ACNGT 3 cut(s) 300, 979, 1169
Bst6I CTCTTC 6 cut(s) 513, 782, 903, 1412, 1875, 2061
BstAUI TGTACA 1 cut(s) 1207
BstBI TTCGAA 1 cut(s) 1807
BstC8I GCNNGC 5 cut(s) 7, 92, 959, 1374, 1819
BstDEI CTNAG 8 cut(s) 180, 291, 439, 792, 930, 1179, 1959, 2267
BstEII GGTNACC 2 cut(s) 426, 1852
BstF5I GGATG 8 cut(s) 709, 820, 1179, 1198, 1308, 2294, 2342, 2349
BstFNI CGCG 3 cut(s) 787, 1314, 1540
BstHHI GCGC 1 cut(s) 436
BstMAI GTCTC 4 cut(s) 242, 646, 701, 2199
BstMWI GCNNNNNNNGC 1 cut(s) 2408
BstNSI RCATGY 3 cut(s) 1202, 1376, 2198
BstPAI GACNNNNGTC 1 cut(s) 254
BstPI GGTNACC 2 cut(s) 426, 1852
BstSFI CTRYAG 1 cut(s) 340
BstSLI GKGCMC 3 cut(s) 2194, 2251, 2332
BstUI CGCG 3 cut(s) 787, 1314, 1540
BstV1I GCAGC 5 cut(s) 38, 196, 199, 1588, 2135
BstV2I GAAGAC 2 cut(s) 79, 569
BstX2I RGATCY 3 cut(s) 219, 1531, 1882
BstYI RGATCY 3 cut(s) 219, 1531, 1882
BsuI GTATCC 1 cut(s) 1974
BsuRI GGCC 2 cut(s) 398, 2389
BtsCI GGATG 8 cut(s) 709, 820, 1179, 1198, 1308, 2294, 2342, 2349
BtsI GCAGTG 3 cut(s) 381, 2249, 2332
BtsIMutI CAGTG 5 cut(s) 381, 1860, 2249, 2312, 2332
BveI ACCTGC 3 cut(s) 439, 1367, 1865
Cac8I GCNNGC 5 cut(s) 7, 92, 959, 1374, 1819
CaiI CAGNNNCTG 2 cut(s) 1582, 1598
CciI TCATGA 1 cut(s) 2028
CfoI GCGC 1 cut(s) 436
Cfr13I GGNCC 1 cut(s) 864
Csp6I GTAC 5 cut(s) 215, 773, 1208, 1812, 1840
CviQI GTAC 5 cut(s) 215, 773, 1208, 1812, 1840
DdeI CTNAG 8 cut(s) 180, 291, 439, 792, 930, 1179, 1959, 2267
DraI TTTAAA 3 cut(s) 147, 390, 1503
EaeI YGGCCR 1 cut(s) 2387
Eam1104I CTCTTC 6 cut(s) 513, 782, 903, 1412, 1875, 2061
EarI CTCTTC 6 cut(s) 513, 782, 903, 1412, 1875, 2061
Eco130I CCWWGG 2 cut(s) 645, 2353
Eco31I GGTCTC 1 cut(s) 646
Eco32I GATATC 1 cut(s) 916
Eco47I GGWCC 1 cut(s) 864
Eco57I CTGAAG 3 cut(s) 158, 1884, 2410
Eco88I CYCGRG 1 cut(s) 2331
Eco91I GGTNACC 2 cut(s) 426, 1852
EcoO65I GGTNACC 2 cut(s) 426, 1852
EcoRI GAATTC 3 cut(s) 279, 1477, 2317
EcoRV GATATC 1 cut(s) 916
EcoT14I CCWWGG 2 cut(s) 645, 2353
EcoT22I ATGCAT 1 cut(s) 1302
ErhI CCWWGG 2 cut(s) 645, 2353
FalI AAGNNNNNCTT 8 cut(s) 882, 914, 1420, 1452, 1801, 1833, 1857, 1889
FauI CCCGC 1 cut(s) 2154
Fnu4HI GCNGC 7 cut(s) 52, 185, 188, 203, 955, 1577, 2149
FokI GGATG 8 cut(s) 716, 827, 1186, 1205, 1295, 2301, 2336, 2349
Fsp4HI GCNGC 7 cut(s) 52, 185, 188, 203, 955, 1577, 2149
FspBI CTAG 8 cut(s) 206, 276, 374, 902, 921, 926, 1463, 1485
GlaI GCGC 1 cut(s) 435
GluI GCNGC 7 cut(s) 52, 185, 188, 203, 955, 1577, 2149
GsaI CCCAGC 1 cut(s) 58
GsuI CTGGAG 2 cut(s) 80, 1820
HaeIII GGCC 2 cut(s) 398, 2389
HapII CCGG 2 cut(s) 399, 2154
HhaI GCGC 1 cut(s) 436
Hin6I GCGC 1 cut(s) 434
HinP1I GCGC 1 cut(s) 434
HincII GTYRAC 2 cut(s) 1494, 1794
HindII GTYRAC 2 cut(s) 1494, 1794
HindIII AAGCTT 2 cut(s) 656, 716
HinfI GANTC 6 cut(s) 59, 250, 479, 1679, 2066, 2374
HpaII CCGG 2 cut(s) 399, 2154
HphI GGTGA 4 cut(s) 695, 718, 772, 1864
Hpy166II GTNNAC 7 cut(s) 259, 1082, 1494, 1665, 1794, 2192, 2249
Hpy8I GTNNAC 7 cut(s) 259, 1082, 1494, 1665, 1794, 2192, 2249
HpyAV CCTTC 6 cut(s) 49, 546, 581, 1208, 1352, 1762
HpyCH4III ACNGT 3 cut(s) 300, 979, 1169
HpyCH4IV ACGT 2 cut(s) 122, 798
HpyF10VI GCNNNNNNNGC 1 cut(s) 2408
HpyF3I CTNAG 8 cut(s) 180, 291, 439, 792, 930, 1179, 1959, 2267
HpySE526I ACGT 2 cut(s) 122, 798
HspAI GCGC 1 cut(s) 434
Kpn2I TCCGGA 1 cut(s) 2153
LguI GCTCTTC 4 cut(s) 903, 1412, 1875, 2061
LmnI GCTCC 6 cut(s) 99, 501, 1056, 1456, 2000, 2156
Lsp1109I GCAGC 5 cut(s) 38, 196, 199, 1588, 2135
LweI GCATC 8 cut(s) 18, 25, 805, 857, 1028, 1468, 1588, 2389
MaeI CTAG 8 cut(s) 206, 276, 374, 902, 921, 926, 1463, 1485
MaeII ACGT 2 cut(s) 122, 798
MaeIII GTNAC 3 cut(s) 426, 1229, 1852
MfeI CAATTG 2 cut(s) 465, 2087
MflI RGATCY 3 cut(s) 219, 1531, 1882
MhlI GDGCHC 4 cut(s) 1053, 2194, 2251, 2332
MlsI TGGCCA 1 cut(s) 2389
MluI ACGCGT 1 cut(s) 785
MluNI TGGCCA 1 cut(s) 2389
MlyI GAGTC 1 cut(s) 244
MmeI TCCRAC 5 cut(s) 49, 865, 1151, 1248, 1387
Mox20I TGGCCA 1 cut(s) 2389
Mph1103I ATGCAT 1 cut(s) 1302
MroI TCCGGA 1 cut(s) 2153
MroXI GAANNNNTTC 3 cut(s) 897, 1137, 1869
MscI TGGCCA 1 cut(s) 2389
MslI CAYNNNNRTG 3 cut(s) 1203, 1377, 1464
Msp20I TGGCCA 1 cut(s) 2389
MspI CCGG 2 cut(s) 399, 2154
MunI CAATTG 2 cut(s) 465, 2087
Mva1269I GAATGC 2 cut(s) 1803, 2163
MvnI CGCG 3 cut(s) 787, 1314, 1540
MwoI GCNNNNNNNGC 1 cut(s) 2408
NlaIV GGNNCC 2 cut(s) 503, 1884
NmuCI GTSAC 1 cut(s) 1852
NsiI ATGCAT 1 cut(s) 1302
NspI RCATGY 3 cut(s) 1202, 1376, 2198
NspV TTCGAA 1 cut(s) 1807
PaeI GCATGC 1 cut(s) 1376
PagI TCATGA 1 cut(s) 2028
PaqCI CACCTGC 1 cut(s) 1367
PciI ACATGT 1 cut(s) 2194
PciSI GCTCTTC 4 cut(s) 903, 1412, 1875, 2061
PctI GAATGC 2 cut(s) 1803, 2163
PdmI GAANNNNTTC 3 cut(s) 897, 1137, 1869
PfeI GAWTC 5 cut(s) 59, 479, 1679, 2066, 2374
PflFI GACNNNGTC 1 cut(s) 121
PflMI CCANNNNNTGG 2 cut(s) 1598, 1849
PkrI GCNGC 7 cut(s) 53, 186, 189, 204, 956, 1578, 2150
PleI GAGTC 1 cut(s) 244
PpsI GAGTC 1 cut(s) 244
PscI ACATGT 1 cut(s) 2194
PshAI GACNNNNGTC 1 cut(s) 254
PshBI ATTAAT 1 cut(s) 971
PspEI GGTNACC 2 cut(s) 426, 1852
PspFI CCCAGC 1 cut(s) 54
PspN4I GGNNCC 2 cut(s) 503, 1884
PspPI GGNCC 1 cut(s) 864
PstNI CAGNNNCTG 2 cut(s) 1582, 1598
PsuI RGATCY 3 cut(s) 219, 1531, 1882
PsyI GACNNNGTC 1 cut(s) 121
RsaI GTAC 5 cut(s) 216, 774, 1209, 1813, 1841
RsaNI GTAC 5 cut(s) 215, 773, 1208, 1812, 1840
RseI CAYNNNNRTG 3 cut(s) 1203, 1377, 1464
SapI GCTCTTC 4 cut(s) 903, 1412, 1875, 2061
SatI GCNGC 7 cut(s) 52, 185, 188, 203, 955, 1577, 2149
Sau96I GGNCC 1 cut(s) 864
ScaI AGTACT 1 cut(s) 774
SchI GAGTC 1 cut(s) 244
SduI GDGCHC 4 cut(s) 1053, 2194, 2251, 2332
SfaNI GCATC 8 cut(s) 18, 25, 805, 857, 1028, 1468, 1588, 2389
SfcI CTRYAG 1 cut(s) 340
SfuI TTCGAA 1 cut(s) 1807
SinI GGWCC 1 cut(s) 864
SmiMI CAYNNNNRTG 3 cut(s) 1203, 1377, 1464
SmlI CTYRAG 2 cut(s) 252, 1007
SmoI CTYRAG 2 cut(s) 252, 1007
SphI GCATGC 1 cut(s) 1376
SsiI CCGC 8 cut(s) 202, 567, 804, 954, 1017, 1312, 1540, 2161
SspI AATATT 1 cut(s) 1649
SspMI CTAG 8 cut(s) 206, 276, 374, 902, 921, 926, 1463, 1485
StyI CCWWGG 2 cut(s) 645, 2353
TaaI ACNGT 3 cut(s) 300, 979, 1169
TaiI ACGT 2 cut(s) 125, 801
TaqI TCGA 3 cut(s) 1807, 1898, 2404
TatI WGTACW 3 cut(s) 772, 1207, 1811
TauI GCSGC 2 cut(s) 205, 957
TfiI GAWTC 5 cut(s) 59, 479, 1679, 2066, 2374
TscAI CASTG 5 cut(s) 388, 1867, 2256, 2319, 2332
TseFI GTSAC 1 cut(s) 1852
TseI GCWGC 5 cut(s) 51, 184, 187, 1576, 2148
Tsp45I GTSAC 1 cut(s) 1852
TspGWI ACGGA 1 cut(s) 1043
TspRI CASTG 5 cut(s) 388, 1867, 2256, 2319, 2332
Tth111I GACNNNGTC 1 cut(s) 121
Van91I CCANNNNNTGG 2 cut(s) 1598, 1849
VneI GTGCAC 2 cut(s) 2190, 2247
VpaK11BI GGWCC 1 cut(s) 864
VspI ATTAAT 1 cut(s) 971
XapI RAATTY 9 cut(s) 279, 1064, 1477, 1585, 1693, 1758, 1953, 1969, 2317
XbaI TCTAGA 1 cut(s) 1462
XceI RCATGY 3 cut(s) 1202, 1376, 2198
XmnI GAANNNNTTC 3 cut(s) 897, 1137, 1869
XspI CTAG 8 cut(s) 206, 276, 374, 902, 921, 926, 1463, 1485
ZrmI AGTACT 1 cut(s) 774
Zsp2I ATGCAT 1 cut(s) 1302
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.