pycom17g22790

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
21189206 .. 21191845
2640 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g22790.1

Sequence Viewer

Length: 2640 bp
ATGGGGAATTGCTGCTCAGTCACTCTGCAAGTGCCATGCGACGCCCTCATCAATCGCTGCCTGGACTGCACCTTCGGACGAGCATCCTACCTTTGTTTCATGAAAGAAAATCTCAAATCTCTCACAAACGCGTTGGAAGAATTGAAAGCGCTGAAGAACGACGTCGAGGACAGAGTCGACAGGGCCGAGGCACAAGGACAGAGGAGGTTAGACGAAGTCCAGTTGTGGATGTCGAGGGTTAAAAAAATCGAAGTGGAAGTCGTCGAATTGTTGAGAGACAAAGATCAGGAGATTCAGAAGTTATGTGCAGGAGGGTACTGCTCGAGTAGCTGCAATTCAAGCTACGAATACGGGAAAAAAGTGACCGAGAAGCTGAGGGAAGTCGATGCTTTGAGTTCGAAGGGAAGGACTTTCGGTAAGGTAGCCGGGGACGCTCCGCCGCTACTGGAGATGCGACAGATGGACCACACTTTGGGGATGGAGTCCATGATTGTTGAGCTATGGAGGCAACTTGAGGAGCCAGAAGTGCGAATTGTTGGGTTGTACGGAATGGGAGGGGTGGGGAAAACTACACTGCTTAATCAGATCCACAACAAGTACCTCGGCACCCCGAATGATTTCGATTTCATAATCTTGATTCCGATTTCAAGAAATCACAGGATTGAGAAAATTCAGAACGAGATTGGGAGGGAAATCGGGTGTTTTAGTGACAGATGGAAGAACAAAGAGAAGGAGCAAAAGGCTTACGAGATCTTCAAGGCATTGCGGAGAAAGAAGTTTGTGTTGCTTTTGGACGATGTGTGGGAGCAGGTAGATCTGACCAAGGTTGGAATTCCAATCCCCGACGAAACAAACCGGTCGAAACTGATATTCACTACTCGCGACGAGCAAGTGTGCAGCAAAATGGGTGGTCGCAAGAAAAGAGTCAAGTGTCTTGAGGAGGATGAAGCATGGAAATTGTTTAGGATGAATGTTAACGTTGCGGAAGATGTGCTTTCTCTTGATCCCGAAATCCCTGGCCTGGCTAAGACTGTGGCAAGAAAGTGCGCCGGTTTGCCTCTTGCTCTGAAAATAGTTGGCAGGGCAATGTCTTGCAAGAAGACAGCAAGAGAATGGAAAGATGCAATTGATGTTTTGAGGACATCGGCTTCGAGATTTGAAGGTATGGAAGAAGTCCTCCCTCTTCTTAAGCTTAGCTACGACAATTTATCTAGCGACGAAGTCAAGGCTTGTTTCTTGTATTGTGCGTTATTTCCGGAAGATTTTGCTATTCATAAAGATGAGTTGATATACAAATGGATGGGTGAGGAAATATTGAAAGAGTATGCCGATGTAGATGGAGCTCTAAACAAGGGTTACACTATCATCGGTACTCTTGTTCGTTCTTGTCTGTTGGAAGATATAAGAGGCCATGTAAAAATGCATGATGTGATTCGTGATATGGCATTGTGGTTAGCTTGTGAACTCGAAGAAACGAAAGACAATTTTATGGTTCAAGCTGGCCATCTTTTGAAGGAAATACCGAATGTTGAAAAATGGGACGGTGTGAAAAGAATGTCATTGATGGCCAATGACATTGAAAATCTTGACACAATACCTTCATGCCCCAATCTACATACCTTGTATCTCAGTAATAATCGTCTGAAGATGATCGATCACAATTTCTTCAATTCTATGTCCACCCTACAAGTTTTGGATTTGTCCAAGAACAAGGATTTAGCCCAGTTGCCATCAGGAATATCGAAATTGGTTTCTTTACTATATCTTGATCTTTCAGAGACATGCATAGCAGCGCTTCCAATTGAGTTAAAGGCATTGGTGAAGCTAATATATCTGAACTTGGAGCATACCAGTGAACTTGATGTGATTCCGCAGAATTTACTCTCTAGCTTCTCGAAACTCAGAGTTTTGAAACTATATAATAGCGGTACTTGCAAAAGCATTCTTGGGGATAATGCGCACCTGGAAAGTGAATTGCAAGGTTTGAAGCACTTGGATATGCTAACCTTTACCATACAAACTGTTCTTATTTCCGAAAGGTTTTTCGCCTCCAACAAGCTAATGAGCTGCACTCGTTTTCTATGCCTTGACGGTTTAAGCTTGCTTGATATATCACCGTTGGCATATATGAAACGTGCATATTCTCTTATTATTAACAGTTGTGGTCGTGTGGAGTACAACTTAGATGTTTTAAGCCAAAGTTCCTTCAAACACCTTGAAGCTGTGGATGTACATGATTGCCCCAACTTGTCGGACTTGACATGGCTCGTCTTTGCTCCAAATCTCAAGACATTATCCATACGCTCATGCTCCAAAATGACAGAAATAATCCGACTTGAAAAGTTGGGTGAAATTGCCCAAGTAGATGAGATGAATCAATTTTCAAAGCTTGATGAATTGATATTGGTAAGCCTACCACAGTTGGAGAGCATATACGGAGACAAAACCTTGCCCTTTCTGTATCTGAAGAGAATCGAAACCCGTGGCTGTCGAAATTTAAAGAAGCTTCCCCTCAACCTTAGCAGCGTCCCGAAACGTGATCTTGTGATCACTGGAGAACAAGAATGGTGGAATATGCTCCTTTGGGAGAGTGAAGATCATAAGAAGGCTTTCCTCCCTTGTTTCAGACAATATAAGTAA

Protein Analysis

880

Amino Acids

100.39

Weight (kDa)

6.2

Isoelectric Point (pI)

45.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 161 - 328 7.9e-49 NB-ARC domain
WHD_DRP PF23559 417 - 482 1.1e-07 Disease resistance protein Winged helix domain
LRR_14 PF23598 519 - 767 4.7e-09 Leucine-rich repeat region
LRR_8 PF13855 536 - 593 2e-09 Leucine rich repeat
LRR_RPS2 PF23247 731 - 836 1.6e-11 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000363)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G12210 AT1G12210 AT1G12210 AT1G12220 AT1G12220 AT1G12220 AT1G12280 AT1G12280 AT1G12290 AT1G12290 AT1G12290 AT1G12290 AT1G15890 AT1G15890 AT1G51480 AT1G52660 AT1G52660 AT1G61180 AT1G61180 AT1G61190 AT1G61190 AT1G61190 AT1G61190 AT1G61300 AT1G61300 AT1G61310 AT3G15700 AT3G15700 AT4G10780 AT4G10780 AT5G43730 AT5G43730 AT5G43730 AT5G43730 AT5G43730 AT5G43740 AT5G43740 AT5G63020
fragaria_vesca FvH4_6g30050 FvH4_6g48220
malus_domestica MD09G1055800.v1.1 MD09G1198800.v1.1 MD17G1204800.v1.1 MD17G1204900.v1.1 MD17G1205000.v1.1 MD17G1205300.v1.1 MD17G1205700.v1.1 MD17G1205800.v1.1 MD17G1224100.v1.1
prunus_persica Prupe.3G054800_v2.0.a1 Prupe.3G054800_v2.0.a1 Prupe.3G080300_v2.0.a1 Prupe.3G080400_v2.0.a1 Prupe.3G080500_v2.0.a1 Prupe.3G080600_v2.0.a1 Prupe.3G080800_v2.0.a1 Prupe.3G083200_v2.0.a1 Prupe.3G099800_v2.0.a1 Prupe.3G099800_v2.0.a1
pyrus_communis pycom17g20860 pycom17g20910 pycom17g22790
rosa_chinensis RchiOBHm_Chr2g0136891 RchiOBHm_Chr2g0136901 RchiOBHm_Chr2g0167711 RchiOBHm_Chr2g0167721 RchiOBHm_Chr2g0167731 RchiOBHm_Chr4g0407611
rosa_laevigata RLG00000018943 RLG00000019278 RLG00000019282 RLG00000019587 RLG00000021748 RLG00000021749 RLG00000031057
rosa_multiflora Rmu_sc0002143.1_g000003 Rmu_sc0002782.1_g000001 Rmu_sc0023879.1_g000001 Rmu_sc0042171.1_g000001
rosa_roxburghii Rroxscaffold_2G00083300 Rroxscaffold_2G00107890 Rroxscaffold_2G00116680
rosa_rugosa Rorug02G0271700 Rorug02G0334900 Rorug02G0531800 Rorug02G0531800
rosa_samantha Rh2AG359900 Rh2AG385100 Rh2AG600500 Rh2AG600600 Rh2BG392200 Rh2BG611000 Rh2BG611100 Rh2BG611200 Rh2CG343100 Rh2CG343300 Rh2CG372300 Rh2CG581400 Rh2CG581500 Rh2DG382900 Rh2DG623700 Rh5AG027500 Rh5CG029900
rosa_wichuraiana Rw2G031490 Rw2G049850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 165
Acc16I TGCGCA 1 cut(s) 1959
Acc36I ACCTGC 1 cut(s) 799
AccB1I GGYRCC 1 cut(s) 605
AccB7I CCANNNNNTGG 1 cut(s) 472
AccI GTMKAC 1 cut(s) 177
AccII CGCG 2 cut(s) 131, 882
AccIII TCCGGA 1 cut(s) 1255
AciI CCGC 6 cut(s) 437, 440, 766, 983, 1871, 1926
AclI AACGTT 1 cut(s) 978
AclWI GGATC 2 cut(s) 580, 998
AcoI YGGCCR 2 cut(s) 1501, 1566
AcsI RAATTY 4 cut(s) 669, 831, 1876, 2494
AcuI CTGAAG 3 cut(s) 173, 1664, 2486
AcyI GRCGYC 2 cut(s) 42, 162
AfaI GTAC 7 cut(s) 317, 545, 599, 1372, 1930, 2177, 2232
AfeI AGCGCT 2 cut(s) 150, 1794
AfiI CCNNNNNNNGG 2 cut(s) 472, 1021
AflII CTTAAG 1 cut(s) 1187
AflIII ACRYGT 1 cut(s) 129
AgeI ACCGGT 1 cut(s) 855
AjnI CCWGG 4 cut(s) 60, 1015, 1020, 1962
Alw21I GWGCWC 1 cut(s) 1345
Alw26I GTCTC 3 cut(s) 270, 1772, 2433
AlwI GGATC 2 cut(s) 580, 998
Ama87I CYCGRG 1 cut(s) 322
Aor13HI TCCGGA 1 cut(s) 1255
Aor51HI AGCGCT 2 cut(s) 150, 1794
AoxI GGCC 5 cut(s) 183, 1018, 1408, 1501, 1566
ApeKI GCWGC 7 cut(s) 12, 57, 330, 897, 1790, 2067, 2523
ApoI RAATTY 4 cut(s) 669, 831, 1876, 2494
ArsI GACNNNNNNTTYG 6 cut(s) 56, 88, 243, 275, 1132, 1164
AsiGI ACCGGT 1 cut(s) 855
Asp700I GAANNNNTTC 2 cut(s) 617, 2609
AspLEI GCGC 4 cut(s) 151, 1049, 1795, 1960
AspS9I GGNCC 2 cut(s) 183, 463
AsuC2I CCSGG 1 cut(s) 427
AsuHPI GGTGA 4 cut(s) 1316, 1831, 2106, 2360
AsuII TTCGAA 1 cut(s) 398
AvaI CYCGRG 1 cut(s) 322
AvaII GGWCC 1 cut(s) 463
BaeI ACNNNNGTAYC 2 cut(s) 1362, 1395
BalI TGGCCA 2 cut(s) 1503, 1568
BanI GGYRCC 1 cut(s) 605
BanII GRGCYC 1 cut(s) 1345
BbsI GAAGAC 1 cut(s) 1106
Bbv12I GWGCWC 1 cut(s) 1345
BbvCI CCTCAGC 1 cut(s) 374
BbvI GCAGC 6 cut(s) 44, 317, 909, 1802, 2054, 2535
BccI CCATC 8 cut(s) 454, 472, 708, 1294, 1331, 1512, 1558, 1738
BciT130I CCWGG 4 cut(s) 62, 1017, 1022, 1964
BclI TGATCA 1 cut(s) 2547
BcnI CCSGG 1 cut(s) 427
BcoDI GTCTC 3 cut(s) 270, 1772, 2433
BfaI CTAG 2 cut(s) 1212, 1887
BfoI RGCGCY 2 cut(s) 152, 1796
BfrI CTTAAG 1 cut(s) 1187
BfuAI ACCTGC 1 cut(s) 799
BglII AGATCT 2 cut(s) 750, 814
BisI GCNGC 8 cut(s) 13, 58, 331, 440, 898, 1791, 2068, 2524
BlpI GCTNAGC 1 cut(s) 1193
BlsI GCNGC 8 cut(s) 14, 59, 332, 441, 899, 1792, 2069, 2525
Bme1390I CCNGG 5 cut(s) 62, 427, 1017, 1022, 1964
Bme18I GGWCC 1 cut(s) 463
BmeT110I CYCGRG 1 cut(s) 322
BmgT120I GGNCC 2 cut(s) 183, 463
BmiI GGNNCC 2 cut(s) 519, 607
BmrFI CCNGG 5 cut(s) 62, 427, 1017, 1022, 1964
BmrI ACTGGG 1 cut(s) 1717
BmsI GCATC 4 cut(s) 92, 376, 441, 1111
BmuI ACTGGG 1 cut(s) 1717
BpiI GAAGAC 1 cut(s) 1106
BplI GAGNNNNNCTC 2 cut(s) 2056, 2088
BpmI CTGGAG 2 cut(s) 467, 2574
Bpu10I CCTNAGC 2 cut(s) 374, 2519
Bpu1102I GCTNAGC 1 cut(s) 1193
Bpu14I TTCGAA 1 cut(s) 398
BpuEI CTTGAG 3 cut(s) 533, 956, 2270
BpuMI CCSGG 1 cut(s) 427
Bsa29I ATCGAT 1 cut(s) 1653
BsaHI GRCGYC 2 cut(s) 42, 162
BsaJI CCNNGG 6 cut(s) 186, 426, 601, 822, 1015, 2482
BsaWI WCCGGW 2 cut(s) 855, 1255
Bsc4I CCNNNNNNNGG 2 cut(s) 472, 1021
Bse118I RCCGGY 2 cut(s) 855, 1049
Bse1I ACTGG 5 cut(s) 220, 450, 1723, 1851, 2557
Bse3DI GCAATG 2 cut(s) 761, 1092
BseAI TCCGGA 1 cut(s) 1255
BseBI CCWGG 4 cut(s) 62, 1017, 1022, 1964
BseCI ATCGAT 1 cut(s) 1653
BseDI CCNNGG 6 cut(s) 186, 426, 601, 822, 1015, 2482
BseGI GGATG 7 cut(s) 83, 234, 483, 949, 972, 1305, 2233
BseLI CCNNNNNNNGG 2 cut(s) 472, 1021
BseMI GCAATG 2 cut(s) 761, 1092
BseMII CTCAG 4 cut(s) 30, 365, 1642, 1915
BseNI ACTGG 5 cut(s) 220, 450, 1723, 1851, 2557
BseRI GAGGAG 3 cut(s) 217, 530, 953
BseXI GCAGC 6 cut(s) 44, 317, 909, 1802, 2054, 2535
BsgI GTGCAG 4 cut(s) 52, 327, 916, 2053
Bsh1236I CGCG 2 cut(s) 131, 882
Bsh1285I CGRYCG 1 cut(s) 860
BshFI GGCC 5 cut(s) 185, 1020, 1410, 1503, 1568
BshNI GGYRCC 1 cut(s) 605
BshTI ACCGGT 1 cut(s) 855
BshVI ATCGAT 1 cut(s) 1653
BsiEI CGRYCG 1 cut(s) 860
BsiHKAI GWGCWC 1 cut(s) 1345
BsiHKCI CYCGRG 1 cut(s) 322
BsiSI CCGG 4 cut(s) 426, 856, 1050, 1256
BslFI GGGAC 3 cut(s) 443, 1553, 2513
BslI CCNNNNNNNGG 2 cut(s) 472, 1021
BsmAI GTCTC 3 cut(s) 270, 1772, 2433
BsmFI GGGAC 3 cut(s) 443, 1553, 2513
BsmI GAATGC 1 cut(s) 1941
BsnI GGCC 5 cut(s) 185, 1020, 1410, 1503, 1568
BsoBI CYCGRG 1 cut(s) 322
Bsp119I TTCGAA 1 cut(s) 398
Bsp1286I GDGCHC 1 cut(s) 1345
Bsp13I TCCGGA 1 cut(s) 1255
Bsp1407I TGTACA 1 cut(s) 2230
Bsp1720I GCTNAGC 1 cut(s) 1193
Bsp68I TCGCGA 1 cut(s) 882
BspACI CCGC 6 cut(s) 437, 440, 766, 983, 1871, 1926
BspANI GGCC 5 cut(s) 185, 1020, 1410, 1503, 1568
BspCNI CTCAG 4 cut(s) 29, 366, 1641, 1914
BspDI ATCGAT 1 cut(s) 1653
BspEI TCCGGA 1 cut(s) 1255
BspFNI CGCG 2 cut(s) 131, 882
BspHI TCATGA 1 cut(s) 99
BspLI GGNNCC 2 cut(s) 519, 607
BspMI ACCTGC 1 cut(s) 799
BspPI GGATC 2 cut(s) 580, 998
BspT104I TTCGAA 1 cut(s) 398
BspT107I GGYRCC 1 cut(s) 605
BspTI CTTAAG 1 cut(s) 1187
BsrDI GCAATG 2 cut(s) 761, 1092
BsrFI RCCGGY 2 cut(s) 855, 1049
BsrGI TGTACA 1 cut(s) 2230
BsrI ACTGG 5 cut(s) 220, 450, 1723, 1851, 2557
BssAI RCCGGY 2 cut(s) 855, 1049
BssECI CCNNGG 6 cut(s) 186, 426, 601, 822, 1015, 2482
BssNI GRCGYC 2 cut(s) 42, 162
BssT1I CCWWGG 1 cut(s) 822
Bst2UI CCWGG 4 cut(s) 62, 1017, 1022, 1964
Bst4CI ACNGT 7 cut(s) 1033, 1544, 2023, 2093, 2118, 2159, 2421
Bst6I CTCTTC 2 cut(s) 1188, 2462
BstACI GRCGYC 2 cut(s) 42, 162
BstAFI CTTAAG 1 cut(s) 1187
BstAUI TGTACA 1 cut(s) 2230
BstBI TTCGAA 1 cut(s) 398
BstC8I GCNNGC 2 cut(s) 1501, 2102
BstDEI CTNAG 8 cut(s) 16, 374, 1026, 1193, 1628, 1901, 2182, 2519
BstDSI CCRYGG 1 cut(s) 2482
BstF5I GGATG 7 cut(s) 83, 234, 483, 949, 972, 1305, 2233
BstFNI CGCG 2 cut(s) 131, 882
BstH2I RGCGCY 2 cut(s) 152, 1796
BstHHI GCGC 4 cut(s) 151, 1049, 1795, 1960
BstMAI GTCTC 3 cut(s) 270, 1772, 2433
BstMCI CGRYCG 1 cut(s) 860
BstMWI GCNNNNNNNGC 7 cut(s) 66, 327, 339, 431, 505, 526, 1932
BstNI CCWGG 4 cut(s) 62, 1017, 1022, 1964
BstNSI RCATGY 1 cut(s) 1785
BstSCI CCNGG 5 cut(s) 60, 425, 1015, 1020, 1962
BstUI CGCG 2 cut(s) 131, 882
BstV1I GCAGC 6 cut(s) 44, 317, 909, 1802, 2054, 2535
BstV2I GAAGAC 1 cut(s) 1106
BstX2I RGATCY 3 cut(s) 585, 750, 814
BstYI RGATCY 3 cut(s) 585, 750, 814
Bsu15I ATCGAT 1 cut(s) 1653
BsuRI GGCC 5 cut(s) 185, 1020, 1410, 1503, 1568
BsuTUI ATCGAT 1 cut(s) 1653
BtgI CCRYGG 1 cut(s) 2482
BtsCI GGATG 7 cut(s) 83, 234, 483, 949, 972, 1305, 2233
BtsI GCAGTG 1 cut(s) 572
BtsIMutI CAGTG 3 cut(s) 572, 1858, 2550
BtuMI TCGCGA 1 cut(s) 882
BveI ACCTGC 1 cut(s) 799
Cac8I GCNNGC 2 cut(s) 1501, 2102
CciI TCATGA 1 cut(s) 99
CfoI GCGC 4 cut(s) 151, 1049, 1795, 1960
Cfr10I RCCGGY 2 cut(s) 855, 1049
Cfr13I GGNCC 2 cut(s) 183, 463
ClaI ATCGAT 1 cut(s) 1653
CseI GACGC 3 cut(s) 50, 440, 2515
Csp6I GTAC 7 cut(s) 316, 544, 598, 1371, 1929, 2176, 2231
CspAI ACCGGT 1 cut(s) 855
CspCI CAANNNNNGTGG 4 cut(s) 889, 924, 2549, 2584
CviQI GTAC 7 cut(s) 316, 544, 598, 1371, 1929, 2176, 2231
DdeI CTNAG 8 cut(s) 16, 374, 1026, 1193, 1628, 1901, 2182, 2519
DraI TTTAAA 1 cut(s) 2499
EaeI YGGCCR 2 cut(s) 1501, 1566
Eam1104I CTCTTC 2 cut(s) 1188, 2462
EarI CTCTTC 2 cut(s) 1188, 2462
EciI GGCGGA 1 cut(s) 426
Ecl136II GAGCTC 1 cut(s) 1343
Eco130I CCWWGG 1 cut(s) 822
Eco24I GRGCYC 1 cut(s) 1345
Eco47I GGWCC 1 cut(s) 463
Eco47III AGCGCT 2 cut(s) 150, 1794
Eco53kI GAGCTC 1 cut(s) 1343
Eco57I CTGAAG 3 cut(s) 173, 1664, 2486
Eco88I CYCGRG 1 cut(s) 322
EcoICRI GAGCTC 1 cut(s) 1343
EcoRI GAATTC 1 cut(s) 831
EcoRII CCWGG 4 cut(s) 60, 1015, 1020, 1962
EcoT14I CCWWGG 1 cut(s) 822
EcoT22I ATGCAT 2 cut(s) 1425, 1787
EcoT38I GRGCYC 1 cut(s) 1345
ErhI CCWWGG 1 cut(s) 822
FalI AAGNNNNNCTT 2 cut(s) 978, 1010
FaqI GGGAC 3 cut(s) 443, 1553, 2513
FbaI TGATCA 1 cut(s) 2547
FblI GTMKAC 1 cut(s) 177
Fnu4HI GCNGC 8 cut(s) 13, 58, 331, 440, 898, 1791, 2068, 2524
FokI GGATG 7 cut(s) 70, 241, 490, 956, 979, 1312, 2240
FriOI GRGCYC 1 cut(s) 1345
Fsp4HI GCNGC 8 cut(s) 13, 58, 331, 440, 898, 1791, 2068, 2524
FspAI RTGCGCAY 1 cut(s) 1959
FspBI CTAG 2 cut(s) 1212, 1887
FspI TGCGCA 1 cut(s) 1959
GlaI GCGC 4 cut(s) 150, 1048, 1794, 1959
GluI GCNGC 8 cut(s) 13, 58, 331, 440, 898, 1791, 2068, 2524
GsuI CTGGAG 2 cut(s) 467, 2574
HaeII RGCGCY 2 cut(s) 152, 1796
HaeIII GGCC 5 cut(s) 185, 1020, 1410, 1503, 1568
HapII CCGG 4 cut(s) 426, 856, 1050, 1256
HgaI GACGC 3 cut(s) 50, 440, 2515
HhaI GCGC 4 cut(s) 151, 1049, 1795, 1960
Hin1I GRCGYC 2 cut(s) 42, 162
Hin6I GCGC 4 cut(s) 149, 1047, 1793, 1958
HinP1I GCGC 4 cut(s) 149, 1047, 1793, 1958
HincII GTYRAC 2 cut(s) 178, 976
HindII GTYRAC 2 cut(s) 178, 976
HindIII AAGCTT 4 cut(s) 1190, 2098, 2387, 2504
HinfI GANTC 9 cut(s) 174, 292, 482, 637, 924, 1432, 1867, 2374, 2472
HpaI GTTAAC 1 cut(s) 976
HpaII CCGG 4 cut(s) 426, 856, 1050, 1256
HphI GGTGA 4 cut(s) 1316, 1831, 2106, 2360
Hpy166II GTNNAC 5 cut(s) 178, 976, 1463, 1680, 1856
Hpy8I GTNNAC 5 cut(s) 178, 976, 1463, 1680, 1856
Hpy99I CGWCG 7 cut(s) 44, 164, 167, 266, 848, 887, 1220
HpyAV CCTTC 9 cut(s) 82, 394, 399, 724, 1154, 1507, 1608, 2215, 2599
HpyCH4III ACNGT 7 cut(s) 1033, 1544, 2023, 2093, 2118, 2159, 2421
HpyCH4IV ACGT 4 cut(s) 162, 978, 2134, 2536
HpyF10VI GCNNNNNNNGC 7 cut(s) 66, 327, 339, 431, 505, 526, 1932
HpyF3I CTNAG 8 cut(s) 16, 374, 1026, 1193, 1628, 1901, 2182, 2519
HpySE526I ACGT 4 cut(s) 162, 978, 2134, 2536
Hsp92I GRCGYC 2 cut(s) 42, 162
HspAI GCGC 4 cut(s) 149, 1047, 1793, 1958
Kpn2I TCCGGA 1 cut(s) 1255
Ksp22I TGATCA 1 cut(s) 2547
KspAI GTTAAC 1 cut(s) 976
LmnI GCTCC 9 cut(s) 439, 517, 733, 805, 1340, 1843, 2281, 2315, 2583
Lsp1109I GCAGC 6 cut(s) 44, 317, 909, 1802, 2054, 2535
LweI GCATC 4 cut(s) 92, 376, 441, 1111
MaeI CTAG 2 cut(s) 1212, 1887
MaeII ACGT 4 cut(s) 162, 978, 2134, 2536
MaeIII GTNAC 4 cut(s) 19, 361, 707, 1355
MfeI CAATTG 2 cut(s) 1125, 1800
MflI RGATCY 3 cut(s) 585, 750, 814
MhlI GDGCHC 1 cut(s) 1345
MlsI TGGCCA 2 cut(s) 1503, 1568
MluI ACGCGT 1 cut(s) 129
MluNI TGGCCA 2 cut(s) 1503, 1568
MlyI GAGTC 3 cut(s) 183, 491, 933
MmeI TCCRAC 7 cut(s) 114, 808, 1374, 2076, 2232, 2356, 2403
Mox20I TGGCCA 2 cut(s) 1503, 1568
Mph1103I ATGCAT 2 cut(s) 1425, 1787
MroI TCCGGA 1 cut(s) 1255
MroXI GAANNNNTTC 2 cut(s) 617, 2609
MscI TGGCCA 2 cut(s) 1503, 1568
MseI TTAA 9 cut(s) 240, 579, 975, 1188, 1808, 2096, 2154, 2192, 2498
MslI CAYNNNNRTG 2 cut(s) 1278, 1851
Msp20I TGGCCA 2 cut(s) 1503, 1568
MspCI CTTAAG 1 cut(s) 1187
MspI CCGG 4 cut(s) 426, 856, 1050, 1256
MspR9I CCNGG 5 cut(s) 62, 427, 1017, 1022, 1964
MunI CAATTG 2 cut(s) 1125, 1800
Mva1269I GAATGC 1 cut(s) 1941
MvaI CCWGG 4 cut(s) 62, 1017, 1022, 1964
MvnI CGCG 2 cut(s) 131, 882
MwoI GCNNNNNNNGC 7 cut(s) 66, 327, 339, 431, 505, 526, 1932
NciI CCSGG 1 cut(s) 427
NlaIV GGNNCC 2 cut(s) 519, 607
NmeAIII GCCGAG 2 cut(s) 211, 582
NmuCI GTSAC 3 cut(s) 19, 361, 707
NruI TCGCGA 1 cut(s) 882
NsbI TGCGCA 1 cut(s) 1959
NsiI ATGCAT 2 cut(s) 1425, 1787
NspI RCATGY 1 cut(s) 1785
NspV TTCGAA 1 cut(s) 398
PaeR7I CTCGAG 1 cut(s) 322
PagI TCATGA 1 cut(s) 99
PcsI WCGNNNNNNNCGW 1 cut(s) 183
PctI GAATGC 1 cut(s) 1941
PdmI GAANNNNTTC 2 cut(s) 617, 2609
PfeI GAWTC 6 cut(s) 292, 637, 1432, 1867, 2374, 2472
PflFI GACNNNGTC 3 cut(s) 173, 215, 1220
PflMI CCANNNNNTGG 1 cut(s) 472
PinAI ACCGGT 1 cut(s) 855
PkrI GCNGC 8 cut(s) 14, 59, 332, 441, 899, 1792, 2069, 2525
PleI GAGTC 3 cut(s) 182, 490, 932
PpsI GAGTC 3 cut(s) 182, 490, 932
Psp124BI GAGCTC 1 cut(s) 1345
Psp1406I AACGTT 1 cut(s) 978
Psp6I CCWGG 4 cut(s) 60, 1015, 1020, 1962
PspGI CCWGG 4 cut(s) 60, 1015, 1020, 1962
PspN4I GGNNCC 2 cut(s) 519, 607
PspPI GGNCC 2 cut(s) 183, 463
PspXI VCTCGAGB 1 cut(s) 322
PsuI RGATCY 3 cut(s) 585, 750, 814
PsyI GACNNNGTC 3 cut(s) 173, 215, 1220
RruI TCGCGA 1 cut(s) 882
RsaI GTAC 7 cut(s) 317, 545, 599, 1372, 1930, 2177, 2232
RsaNI GTAC 7 cut(s) 316, 544, 598, 1371, 1929, 2176, 2231
RseI CAYNNNNRTG 2 cut(s) 1278, 1851
SacI GAGCTC 1 cut(s) 1345
SalI GTCGAC 1 cut(s) 176
SaqAI TTAA 9 cut(s) 240, 579, 975, 1188, 1808, 2096, 2154, 2192, 2498
SatI GCNGC 8 cut(s) 13, 58, 331, 440, 898, 1791, 2068, 2524
Sau96I GGNCC 2 cut(s) 183, 463
SchI GAGTC 3 cut(s) 183, 491, 933
ScrFI CCNGG 5 cut(s) 62, 427, 1017, 1022, 1964
SduI GDGCHC 1 cut(s) 1345
SfaNI GCATC 4 cut(s) 92, 376, 441, 1111
Sfr274I CTCGAG 1 cut(s) 322
SfuI TTCGAA 1 cut(s) 398
SinI GGWCC 1 cut(s) 463
SlaI CTCGAG 1 cut(s) 322
SmiMI CAYNNNNRTG 2 cut(s) 1278, 1851
SmlI CTYRAG 5 cut(s) 322, 512, 935, 1187, 2285
SmoI CTYRAG 5 cut(s) 322, 512, 935, 1187, 2285
SsiI CCGC 6 cut(s) 437, 440, 766, 983, 1871, 1926
SspI AATATT 1 cut(s) 1314
SspMI CTAG 2 cut(s) 1212, 1887
SstI GAGCTC 1 cut(s) 1345
StyD4I CCNGG 5 cut(s) 60, 425, 1015, 1020, 1962
StyI CCWWGG 1 cut(s) 822
TaaI ACNGT 7 cut(s) 1033, 1544, 2023, 2093, 2118, 2159, 2421
TaiI ACGT 4 cut(s) 165, 981, 2137, 2539
TaqII GACCGA 1 cut(s) 380
TatI WGTACW 2 cut(s) 2175, 2230
TauI GCSGC 1 cut(s) 442
TfiI GAWTC 6 cut(s) 292, 637, 1432, 1867, 2374, 2472
Tru1I TTAA 9 cut(s) 240, 579, 975, 1188, 1808, 2096, 2154, 2192, 2498
Tru9I TTAA 9 cut(s) 240, 579, 975, 1188, 1808, 2096, 2154, 2192, 2498
TscAI CASTG 3 cut(s) 579, 1858, 2557
TseFI GTSAC 3 cut(s) 19, 361, 707
TseI GCWGC 7 cut(s) 12, 57, 330, 897, 1790, 2067, 2523
Tsp45I GTSAC 3 cut(s) 19, 361, 707
TspGWI ACGGA 2 cut(s) 561, 2451
TspRI CASTG 3 cut(s) 579, 1858, 2557
Tth111I GACNNNGTC 3 cut(s) 173, 215, 1220
Van91I CCANNNNNTGG 1 cut(s) 472
Vha464I CTTAAG 1 cut(s) 1187
VpaK11BI GGWCC 1 cut(s) 463
XapI RAATTY 4 cut(s) 669, 831, 1876, 2494
XceI RCATGY 1 cut(s) 1785
XhoI CTCGAG 1 cut(s) 322
XmiI GTMKAC 1 cut(s) 177
XmnI GAANNNNTTC 2 cut(s) 617, 2609
XspI CTAG 2 cut(s) 1212, 1887
ZraI GACGTC 1 cut(s) 163
Zsp2I ATGCAT 2 cut(s) 1425, 1787
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.