AT1G61310

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
22612998 .. 22616373
3376 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G61310.1

Sequence Viewer

Length: 2778 bp
ATGGGGAGTTGTTTTTCTTTTCAAATTGCTGTTGGTGATCAAACGATGAATCGTATCTTTGATTGCTTAATTGGTAAAAGTTATATTCGAACCCTCGAGCAGAATCTCAGAGCTCTGCAGAGGGAAATGGAAGATCTGAGAGCAACTCAACATGAGGTACAGAACAAGGTAGCGAGAGAGGAGTCACGCCATCAACAAAGGCTTGAAGCTGTCCAGGTATGGCTTGACCGTGTCAATAGCATTGATATAGAGTGCAAAGATCTGCTAAGTGTTAGTCCCGTTGAGCTTCAAAAGTTGTGTCTCTGCGGTTTGTGTACAAAATATGTATGTTCAAGCTACAAATATGGGAAAAAGGTATTCTTGTTACTGGAAGAGGTTAAGATACTAAAATCGGAGGGAAATTTTGACGAAGTTTCTCAGCCACCTCCAAGATCTGAAGTTGAAGAGAGGCCTACTCAGCCTACGATAGGTCAAGAAGAAATGCTCGAAAAGGCATGGAACCGCCTTATGGAAGATGGAGTCGGAATCATGGGTCTGCACGGTATGGGTGGTGTAGGCAAAACAACCCTTTTCAAGAAAATCCACAACAAGTTCGCTGAAATAGGTGGTACGTTTGACATTGTGATCTGGATCGTGGTGTCTCAAGGCGCAAAGCTTTCAAAGCTTCAAGAAGATATTGCAGAGAAACTGCACCTTTGTGACGACCTGTGGAAGAACAAGAATGAAAGTGATAAGGCCACTGATATACACAGAGTTTTAAAGGGAAAGAGATTTGTTTTGATGCTAGATGATATATGGGAGAAAGTGGATTTAGAGGCCATTGGTATTCCCTATCCGAGTGAAGTAAATAAATGCAAAGTAGCATTCACGACACGTTCTCGGGAAGTTTGTGGGGAGATGGGGGATCATAAGCCGATGCAAGTCAACTGTTTGGAACCAGAGGATGCATGGGAGTTGTTCAAAAACAAGGTCGGAGACAACACATTAAGTAGTGATCCTGTTATTGTGGGGTTGGCAAGAGAGGTGGCTCAAAAATGTCGTGGTCTGCCATTGGCGCTCAACGTCATTGGTGAGACAATGGCATCTAAAACTATGGTACAAGAATGGGAGTATGCAATCGATGTTTTGACTAGATCCGCTGCAGAGTTTTCTGGCATGGAAAACAAAATTCTTCCGATTCTCAAGTACAGCTACGATAGCTTGGGGGATGAACATATCAAGTCGTGTTTCCTATATTGTGCTCTGTTTCCTGAAGATGGTCAGATATATACCGAAACCTTGATAGACAAATTGATATGCGAAGGATTCATCGGAGAAGACCAAGTTATAAAAAGAGCGAGGAATAAGGGTTATGCGATGCTCGGTACCCTTACCCGTGCAAACTTGCTAACAAAGGTTGGTACAGAACTTGCTAATTTACTAACAAAGGTTAGTATATATCATTGTGTGATGCATGACGTGGTTCGTGAAATGGCTTTATGGATTGCTTCCGATTTTGGGAAACAGAAAGAGAATTTTGTTGTGCAAGCAAGTGCCGGGTTACATGAAATACCAGAAGTCAAGGATTGGGGAGCTGTAAGAAGGATGTCATTAATGAGGAATGAAATTGAAGAGATAACATGCGAGTCCAAGTGTTCTGAACTTACAACTTTGTTCCTTCAAAGTAATCAATTGAAGAATCTATCAGGTGAATTCATTCGGTATATGCAAAAGCTAGTTGTTTTGGATCTTTCAGATAATCGTGACTTCAATGAACTTCCAGAGCAGATATCGGGGCTAGTCTCGTTGCAGTATCTTGACTTGTCGTTTACAAGAATAGAGCAACTGCCTGTTGGCCTCAAAGAGTTGAAAAAGCTAACTTTCCTAGATTTGGCTTATACTGCGCGACTTTGTAGTATCAGTGGGATATCAAGGTTGTTGAGTTTAAGAGTGTTGAGCCTGCTAGGGTCTAAAGTTCATGGAGATGCTAGCGTATTGAAGGAGCTGCAGCAATTGGAGAATCTACAAGATCTAGCCATAACTCTATCCGCCGAGTTAATTAGTTTGGATCAAAGGTTGGCGAAGGTAATCTCTATTCTTGGTATTGAGGGGTTTCTTCAAAAGCCATTCGATTTATCATTCCTGGCGAGTATGGAGAATCTTAGTTCCCTATGGGTGAAAAATAGTTATTTCTCGGAGATAAAGTGCAGAGAAAGCGAGACAGACTCGTCTTATTTACACATCAATCCGAAAATTCCATGCTTTACCAACCTCTCACGACTGGATATAGTGAAGTGCCATAGCATGAAGGATCTGACTTGGATATTGTTTGCTCCAAATCTTGTCGTGCTATTCATTGAAGATTCAAGAGAAGTGGGAGAAATAATAAACAAAGAGAAAGCAACCAATCTTACAAGTATTACACCATTTCTGAAACTAGAAAGGTTGATTTTGTGTTATTTGCCGAAGCTGGAGAGTATCTACTGGAGTCCTCTCCCCTTTCCGCTTTTGTTGAACATAGATGTTGAAGAATGTCCAAAGCTGAGAAAGCTTCCATTAAATGCTACAAGTGCTCCAAAAGTTGAAGAGTTTCGAATACTTATGTATCCTCCAGAACTTGAATGGGAGGACGAAGATACCAAAAATCGATTCTTGCCTGAAATGGTTAGTACTAGTACGTCGTCTAAAGATCCATTACTCAGGAATGGGATTCCTCGCTGTCTAAAATCAGAATCAACGCTTCTTCTTCTTATATTGCTTTATCTATCTTCTTGTAGAGCATTTGGATTGTATAATTGA

Protein Analysis

925

Amino Acids

105.06

Weight (kDa)

5.49

Isoelectric Point (pI)

45.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 158 - 329 1.5e-67 NB-ARC domain
WHD_DRP PF23559 415 - 492 7.4e-06 Disease resistance protein Winged helix domain
LRR_14 PF23598 526 - 788 3.6e-18 Leucine-rich repeat region
LRR_8 PF13855 547 - 606 4.1e-10 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000363)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G12210 AT1G12210 AT1G12210 AT1G12220 AT1G12220 AT1G12220 AT1G12280 AT1G12280 AT1G12290 AT1G12290 AT1G12290 AT1G12290 AT1G15890 AT1G15890 AT1G51480 AT1G52660 AT1G52660 AT1G61180 AT1G61180 AT1G61190 AT1G61190 AT1G61190 AT1G61190 AT1G61300 AT1G61300 AT1G61310 AT3G15700 AT3G15700 AT4G10780 AT4G10780 AT5G43730 AT5G43730 AT5G43730 AT5G43730 AT5G43730 AT5G43740 AT5G43740 AT5G63020
fragaria_vesca FvH4_6g30050 FvH4_6g48220
malus_domestica MD09G1055800.v1.1 MD09G1198800.v1.1 MD17G1204800.v1.1 MD17G1204900.v1.1 MD17G1205000.v1.1 MD17G1205300.v1.1 MD17G1205700.v1.1 MD17G1205800.v1.1 MD17G1224100.v1.1
prunus_persica Prupe.3G054800_v2.0.a1 Prupe.3G054800_v2.0.a1 Prupe.3G080300_v2.0.a1 Prupe.3G080400_v2.0.a1 Prupe.3G080500_v2.0.a1 Prupe.3G080600_v2.0.a1 Prupe.3G080800_v2.0.a1 Prupe.3G083200_v2.0.a1 Prupe.3G099800_v2.0.a1 Prupe.3G099800_v2.0.a1
pyrus_communis pycom17g20860 pycom17g20910 pycom17g22790
rosa_chinensis RchiOBHm_Chr2g0136891 RchiOBHm_Chr2g0136901 RchiOBHm_Chr2g0167711 RchiOBHm_Chr2g0167721 RchiOBHm_Chr2g0167731 RchiOBHm_Chr4g0407611
rosa_laevigata RLG00000018943 RLG00000019278 RLG00000019282 RLG00000019587 RLG00000021748 RLG00000021749 RLG00000031057
rosa_multiflora Rmu_sc0002143.1_g000003 Rmu_sc0002782.1_g000001 Rmu_sc0023879.1_g000001 Rmu_sc0042171.1_g000001
rosa_roxburghii Rroxscaffold_2G00083300 Rroxscaffold_2G00107890 Rroxscaffold_2G00116680
rosa_rugosa Rorug02G0271700 Rorug02G0334900 Rorug02G0531800 Rorug02G0531800
rosa_samantha Rh2AG359900 Rh2AG385100 Rh2AG600500 Rh2AG600600 Rh2BG392200 Rh2BG611000 Rh2BG611100 Rh2BG611200 Rh2CG343100 Rh2CG343300 Rh2CG372300 Rh2CG581400 Rh2CG581500 Rh2DG382900 Rh2DG623700 Rh5AG027500 Rh5CG029900
rosa_wichuraiana Rw2G031490 Rw2G049850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1328
AasI GACNNNNNNGTC 1 cut(s) 2206
Acc65I GGTACC 1 cut(s) 1364
AccB1I GGYRCC 1 cut(s) 1364
AccII CGCG 1 cut(s) 1885
AciI CCGC 5 cut(s) 306, 502, 1137, 2028, 2483
AclWI GGATC 8 cut(s) 638, 912, 989, 1128, 1734, 2055, 2298, 2663
AcsI RAATTY 5 cut(s) 400, 1167, 1513, 1691, 2232
AcuI CTGAAG 2 cut(s) 456, 1272
AfaI GTAC 9 cut(s) 159, 316, 610, 1098, 1187, 1366, 1402, 2650, 2656
AfiI CCNNNNNNNGG 5 cut(s) 467, 508, 1256, 1497, 1870
AflIII ACRYGT 1 cut(s) 872
AhlI ACTAGT 1 cut(s) 2651
AjiI CACGTC 1 cut(s) 1459
AjnI CCWGG 2 cut(s) 213, 2121
AjuI GAANNNNNNNTTGG 2 cut(s) 2612, 2644
AleI CACNNNNGTG 1 cut(s) 696
Alw21I GWGCWC 3 cut(s) 115, 1243, 2554
Alw26I GTCTC 6 cut(s) 305, 645, 969, 1067, 1786, 2192
AlwI GGATC 8 cut(s) 638, 912, 989, 1128, 1734, 2055, 2298, 2663
Ama87I CYCGRG 2 cut(s) 95, 879
AoxI GGCC 4 cut(s) 449, 735, 816, 1834
ApeKI GCWGC 3 cut(s) 1139, 1984, 1987
ApoI RAATTY 5 cut(s) 400, 1167, 1513, 1691, 2232
ArsI GACNNNNNNTTYG 4 cut(s) 283, 315, 954, 986
AseI ATTAAT 1 cut(s) 1592
Asp700I GAANNNNTTC 2 cut(s) 1695, 2568
Asp718I GGTACC 1 cut(s) 1364
AspLEI GCGC 3 cut(s) 650, 1057, 1885
AsuC2I CCSGG 1 cut(s) 1537
AsuHPI GGTGA 4 cut(s) 47, 1082, 1700, 2167
AsuII TTCGAA 2 cut(s) 88, 2572
AsuNHI GCTAGC 1 cut(s) 1967
AvaI CYCGRG 2 cut(s) 95, 879
BaeI ACNNNNGTAYC 2 cut(s) 2567, 2600
BanI GGYRCC 1 cut(s) 1364
BanII GRGCYC 1 cut(s) 115
BbsI GAAGAC 1 cut(s) 1323
Bbv12I GWGCWC 3 cut(s) 115, 1243, 2554
BbvI GCAGC 3 cut(s) 1126, 1971, 1999
BccI CCATC 4 cut(s) 198, 509, 892, 1250
BciT130I CCWGG 2 cut(s) 215, 2123
BciVI GTATCC 1 cut(s) 2595
BclI TGATCA 1 cut(s) 37
BcnI CCSGG 1 cut(s) 1537
BcoDI GTCTC 6 cut(s) 305, 645, 969, 1067, 1786, 2192
BcuI ACTAGT 1 cut(s) 2651
BfmI CTRYAG 3 cut(s) 116, 1140, 1985
BfoI RGCGCY 1 cut(s) 1058
BfuI GTATCC 1 cut(s) 2595
BglII AGATCT 4 cut(s) 133, 259, 431, 2008
BisI GCNGC 3 cut(s) 1140, 1985, 1988
BlsI GCNGC 3 cut(s) 1141, 1986, 1989
BmcAI AGTACT 1 cut(s) 2650
Bme1390I CCNGG 3 cut(s) 215, 1537, 2123
BmeT110I CYCGRG 2 cut(s) 95, 879
BmgBI CACGTC 1 cut(s) 1459
BmiI GGNNCC 3 cut(s) 500, 936, 1366
BmrFI CCNGG 3 cut(s) 215, 1537, 2123
BmsI GCATC 7 cut(s) 771, 906, 934, 1091, 1347, 1440, 1954
BmtI GCTAGC 1 cut(s) 1971
BpiI GAAGAC 1 cut(s) 1323
BplI GAGNNNNNCTC 6 cut(s) 130, 162, 439, 471, 2189, 2221
BpmI CTGGAG 3 cut(s) 2471, 2485, 2574
Bpu14I TTCGAA 2 cut(s) 88, 2572
BpuEI CTTGAG 2 cut(s) 627, 1166
BpuMI CCSGG 1 cut(s) 1537
Bsa29I ATCGAT 2 cut(s) 1119, 2626
BsaBI GATNNNNATC 1 cut(s) 629
BsaXI ACNNNNNCTCC 4 cut(s) 2168, 2198, 2536, 2566
Bsc4I CCNNNNNNNGG 5 cut(s) 467, 508, 1256, 1497, 1870
Bse1I ACTGG 3 cut(s) 372, 2265, 2468
Bse8I GATNNNNATC 1 cut(s) 629
BseBI CCWGG 2 cut(s) 215, 2123
BseCI ATCGAT 2 cut(s) 1119, 2626
BseGI GGATG 3 cut(s) 949, 1213, 1590
BseJI GATNNNNATC 1 cut(s) 629
BseLI CCNNNNNNNGG 5 cut(s) 467, 508, 1256, 1497, 1870
BseMII CTCAG 6 cut(s) 121, 128, 431, 470, 2513, 2692
BseNI ACTGG 3 cut(s) 372, 2265, 2468
BseRI GAGGAG 1 cut(s) 194
BseXI GCAGC 3 cut(s) 1126, 1971, 1999
BsgI GTGCAG 3 cut(s) 521, 674, 2206
Bsh1236I CGCG 1 cut(s) 1885
BshFI GGCC 4 cut(s) 451, 737, 818, 1836
BshNI GGYRCC 1 cut(s) 1364
BshVI ATCGAT 2 cut(s) 1119, 2626
BsiHKAI GWGCWC 3 cut(s) 115, 1243, 2554
BsiHKCI CYCGRG 2 cut(s) 95, 879
BsiSI CCGG 1 cut(s) 1536
BslFI GGGAC 1 cut(s) 261
BslI CCNNNNNNNGG 5 cut(s) 467, 508, 1256, 1497, 1870
BsmAI GTCTC 6 cut(s) 305, 645, 969, 1067, 1786, 2192
BsmFI GGGAC 1 cut(s) 261
BsmI GAATGC 1 cut(s) 863
BsnI GGCC 4 cut(s) 451, 737, 818, 1836
BsoBI CYCGRG 2 cut(s) 95, 879
Bsp119I TTCGAA 2 cut(s) 88, 2572
Bsp1286I GDGCHC 3 cut(s) 115, 1243, 2554
Bsp1407I TGTACA 1 cut(s) 314
BspACI CCGC 5 cut(s) 306, 502, 1137, 2028, 2483
BspANI GGCC 4 cut(s) 451, 737, 818, 1836
BspCNI CTCAG 6 cut(s) 120, 129, 430, 469, 2514, 2691
BspDI ATCGAT 2 cut(s) 1119, 2626
BspFNI CGCG 1 cut(s) 1885
BspLI GGNNCC 3 cut(s) 500, 936, 1366
BspMAI CTGCAG 3 cut(s) 120, 1144, 1989
BspOI GCTAGC 1 cut(s) 1971
BspPI GGATC 8 cut(s) 638, 912, 989, 1128, 1734, 2055, 2298, 2663
BspT104I TTCGAA 2 cut(s) 88, 2572
BspT107I GGYRCC 1 cut(s) 1364
BsrGI TGTACA 1 cut(s) 314
BsrI ACTGG 3 cut(s) 372, 2265, 2468
Bst2UI CCWGG 2 cut(s) 215, 2123
Bst4CI ACNGT 3 cut(s) 230, 542, 929
Bst6I CTCTTC 4 cut(s) 366, 438, 1605, 2559
BstAUI TGTACA 1 cut(s) 314
BstBI TTCGAA 2 cut(s) 88, 2572
BstC8I GCNNGC 3 cut(s) 1527, 1940, 1969
BstDEI CTNAG 8 cut(s) 107, 137, 266, 417, 456, 2141, 2522, 2678
BstENI CCTNNNNNAGG 1 cut(s) 465
BstF5I GGATG 3 cut(s) 949, 1213, 1590
BstFNI CGCG 1 cut(s) 1885
BstH2I RGCGCY 1 cut(s) 1058
BstHHI GCGC 3 cut(s) 650, 1057, 1885
BstMAI GTCTC 6 cut(s) 305, 645, 969, 1067, 1786, 2192
BstMWI GCNNNNNNNGC 8 cut(s) 457, 661, 1054, 1197, 1880, 2193, 2527, 2549
BstNI CCWGG 2 cut(s) 215, 2123
BstNSI RCATGY 1 cut(s) 1623
BstSCI CCNGG 3 cut(s) 213, 1535, 2121
BstSFI CTRYAG 3 cut(s) 116, 1140, 1985
BstUI CGCG 1 cut(s) 1885
BstV1I GCAGC 3 cut(s) 1126, 1971, 1999
BstV2I GAAGAC 1 cut(s) 1323
BstX2I RGATCY 8 cut(s) 133, 259, 431, 1133, 1726, 2008, 2290, 2668
BstYI RGATCY 8 cut(s) 133, 259, 431, 1133, 1726, 2008, 2290, 2668
Bsu15I ATCGAT 2 cut(s) 1119, 2626
BsuI GTATCC 1 cut(s) 2595
BsuRI GGCC 4 cut(s) 451, 737, 818, 1836
BsuTUI ATCGAT 2 cut(s) 1119, 2626
BtgZI GCGATG 1 cut(s) 1370
BtrI CACGTC 1 cut(s) 1459
BtsCI GGATG 3 cut(s) 949, 1213, 1590
BtsIMutI CAGTG 2 cut(s) 738, 1906
Cac8I GCNNGC 3 cut(s) 1527, 1940, 1969
CfoI GCGC 3 cut(s) 650, 1057, 1885
ClaI ATCGAT 2 cut(s) 1119, 2626
Csp6I GTAC 9 cut(s) 158, 315, 609, 1097, 1186, 1365, 1401, 2649, 2655
CspCI CAANNNNNGTGG 4 cut(s) 1005, 1040, 2334, 2369
CviQI GTAC 9 cut(s) 158, 315, 609, 1097, 1186, 1365, 1401, 2649, 2655
DdeI CTNAG 8 cut(s) 107, 137, 266, 417, 456, 2141, 2522, 2678
DraI TTTAAA 1 cut(s) 759
DrdI GACNNNNNNGTC 1 cut(s) 2206
DseDI GACNNNNNNGTC 1 cut(s) 2206
Eam1104I CTCTTC 4 cut(s) 366, 438, 1605, 2559
EarI CTCTTC 4 cut(s) 366, 438, 1605, 2559
EciI GGCGGA 1 cut(s) 2017
Ecl136II GAGCTC 1 cut(s) 113
Eco147I AGGCCT 1 cut(s) 451
Eco24I GRGCYC 1 cut(s) 115
Eco32I GATATC 2 cut(s) 1770, 1908
Eco53kI GAGCTC 1 cut(s) 113
Eco57I CTGAAG 2 cut(s) 456, 1272
Eco88I CYCGRG 2 cut(s) 95, 879
EcoICRI GAGCTC 1 cut(s) 113
EcoNI CCTNNNNNAGG 1 cut(s) 465
EcoRI GAATTC 1 cut(s) 1691
EcoRII CCWGG 2 cut(s) 213, 2121
EcoRV GATATC 2 cut(s) 1770, 1908
EcoT22I ATGCAT 2 cut(s) 949, 1455
EcoT38I GRGCYC 1 cut(s) 115
FalI AAGNNNNNCTT 2 cut(s) 344, 376
FaqI GGGAC 1 cut(s) 261
FbaI TGATCA 1 cut(s) 37
Fnu4HI GCNGC 3 cut(s) 1140, 1985, 1988
FokI GGATG 3 cut(s) 956, 1220, 1597
FriOI GRGCYC 1 cut(s) 115
Fsp4HI GCNGC 3 cut(s) 1140, 1985, 1988
GlaI GCGC 3 cut(s) 649, 1056, 1884
GluI GCNGC 3 cut(s) 1140, 1985, 1988
GsuI CTGGAG 3 cut(s) 2471, 2485, 2574
HaeII RGCGCY 1 cut(s) 1058
HaeIII GGCC 4 cut(s) 451, 737, 818, 1836
HapII CCGG 1 cut(s) 1536
HhaI GCGC 3 cut(s) 650, 1057, 1885
Hin6I GCGC 3 cut(s) 648, 1055, 1883
HinP1I GCGC 3 cut(s) 648, 1055, 1883
HincII GTYRAC 1 cut(s) 925
HindII GTYRAC 1 cut(s) 925
HindIII AAGCTT 3 cut(s) 653, 662, 2528
HpaII CCGG 1 cut(s) 1536
HphI GGTGA 4 cut(s) 47, 1082, 1700, 2167
Hpy166II GTNNAC 3 cut(s) 315, 925, 1809
Hpy8I GTNNAC 3 cut(s) 315, 925, 1809
Hpy99I CGWCG 1 cut(s) 2662
HpyAV CCTTC 6 cut(s) 1295, 1575, 1667, 1972, 2056, 2281
HpyCH4III ACNGT 3 cut(s) 230, 542, 929
HpyCH4IV ACGT 5 cut(s) 611, 874, 1062, 1458, 2657
HpyF10VI GCNNNNNNNGC 8 cut(s) 457, 661, 1054, 1197, 1880, 2193, 2527, 2549
HpyF3I CTNAG 8 cut(s) 107, 137, 266, 417, 456, 2141, 2522, 2678
HpySE526I ACGT 5 cut(s) 611, 874, 1062, 1458, 2657
HspAI GCGC 3 cut(s) 648, 1055, 1883
KpnI GGTACC 1 cut(s) 1368
Ksp22I TGATCA 1 cut(s) 37
LmnI GCTCC 4 cut(s) 1571, 1981, 2317, 2557
Lsp1109I GCAGC 3 cut(s) 1126, 1971, 1999
LweI GCATC 7 cut(s) 771, 906, 934, 1091, 1347, 1440, 1954
MaeII ACGT 5 cut(s) 611, 874, 1062, 1458, 2657
MaeIII GTNAC 5 cut(s) 183, 363, 698, 1539, 1742
MfeI CAATTG 2 cut(s) 1670, 1991
MflI RGATCY 8 cut(s) 133, 259, 431, 1133, 1726, 2008, 2290, 2668
MhlI GDGCHC 3 cut(s) 115, 1243, 2554
MlyI GAGTC 5 cut(s) 191, 528, 1634, 2198, 2476
MmeI TCCRAC 2 cut(s) 502, 952
Mph1103I ATGCAT 2 cut(s) 949, 1455
MroXI GAANNNNTTC 2 cut(s) 1695, 2568
MseI TTAA 8 cut(s) 68, 378, 758, 986, 1592, 1925, 2036, 2537
MslI CAYNNNNRTG 2 cut(s) 696, 1962
MspA1I CMGCKG 1 cut(s) 1139
MspI CCGG 1 cut(s) 1536
MspR9I CCNGG 3 cut(s) 215, 1537, 2123
MunI CAATTG 2 cut(s) 1670, 1991
Mva1269I GAATGC 1 cut(s) 863
MvaI CCWGG 2 cut(s) 215, 2123
MvnI CGCG 1 cut(s) 1885
MwoI GCNNNNNNNGC 8 cut(s) 457, 661, 1054, 1197, 1880, 2193, 2527, 2549
NciI CCSGG 1 cut(s) 1537
NheI GCTAGC 1 cut(s) 1967
NlaIV GGNNCC 3 cut(s) 500, 936, 1366
NmeAIII GCCGAG 1 cut(s) 2056
NmuCI GTSAC 3 cut(s) 183, 698, 1742
NsiI ATGCAT 2 cut(s) 949, 1455
NspI RCATGY 1 cut(s) 1623
NspV TTCGAA 2 cut(s) 88, 2572
OliI CACNNNNGTG 1 cut(s) 696
PaeR7I CTCGAG 1 cut(s) 95
PceI AGGCCT 1 cut(s) 451
PctI GAATGC 1 cut(s) 863
PdmI GAANNNNTTC 2 cut(s) 1695, 2568
PflFI GACNNNGTC 1 cut(s) 230
PkrI GCNGC 3 cut(s) 1141, 1986, 1989
PleI GAGTC 5 cut(s) 190, 527, 1633, 2198, 2475
PpsI GAGTC 5 cut(s) 190, 527, 1633, 2198, 2475
PshBI ATTAAT 1 cut(s) 1592
PsiI TTATAA 1 cut(s) 1328
Psp124BI GAGCTC 1 cut(s) 115
Psp6I CCWGG 2 cut(s) 213, 2121
PspGI CCWGG 2 cut(s) 213, 2121
PspN4I GGNNCC 3 cut(s) 500, 936, 1366
PspXI VCTCGAGB 1 cut(s) 95
PstI CTGCAG 3 cut(s) 120, 1144, 1989
PsuI RGATCY 8 cut(s) 133, 259, 431, 1133, 1726, 2008, 2290, 2668
PsyI GACNNNGTC 1 cut(s) 230
RsaI GTAC 9 cut(s) 159, 316, 610, 1098, 1187, 1366, 1402, 2650, 2656
RsaNI GTAC 9 cut(s) 158, 315, 609, 1097, 1186, 1365, 1401, 2649, 2655
RseI CAYNNNNRTG 2 cut(s) 696, 1962
SacI GAGCTC 1 cut(s) 115
SaqAI TTAA 8 cut(s) 68, 378, 758, 986, 1592, 1925, 2036, 2537
SatI GCNGC 3 cut(s) 1140, 1985, 1988
ScaI AGTACT 1 cut(s) 2650
SchI GAGTC 5 cut(s) 191, 528, 1634, 2198, 2476
ScrFI CCNGG 3 cut(s) 215, 1537, 2123
SduI GDGCHC 3 cut(s) 115, 1243, 2554
SfaNI GCATC 7 cut(s) 771, 906, 934, 1091, 1347, 1440, 1954
SfcI CTRYAG 3 cut(s) 116, 1140, 1985
Sfr274I CTCGAG 1 cut(s) 95
SfuI TTCGAA 2 cut(s) 88, 2572
SlaI CTCGAG 1 cut(s) 95
SmiMI CAYNNNNRTG 2 cut(s) 696, 1962
SmlI CTYRAG 3 cut(s) 95, 642, 1181
SmoI CTYRAG 3 cut(s) 95, 642, 1181
SpeI ACTAGT 1 cut(s) 2651
SseBI AGGCCT 1 cut(s) 451
SsiI CCGC 5 cut(s) 306, 502, 1137, 2028, 2483
SstI GAGCTC 1 cut(s) 115
StuI AGGCCT 1 cut(s) 451
StyD4I CCNGG 3 cut(s) 213, 1535, 2121
TaaI ACNGT 3 cut(s) 230, 542, 929
TaiI ACGT 5 cut(s) 614, 877, 1065, 1461, 2660
TaqI TCGA 7 cut(s) 88, 96, 486, 1119, 2109, 2572, 2626
TatI WGTACW 3 cut(s) 314, 1185, 2648
Tru1I TTAA 8 cut(s) 68, 378, 758, 986, 1592, 1925, 2036, 2537
Tru9I TTAA 8 cut(s) 68, 378, 758, 986, 1592, 1925, 2036, 2537
TscAI CASTG 2 cut(s) 745, 1906
TseFI GTSAC 3 cut(s) 183, 698, 1742
TseI GCWGC 3 cut(s) 1139, 1984, 1987
Tsp45I GTSAC 3 cut(s) 183, 698, 1742
TspRI CASTG 2 cut(s) 745, 1906
Tth111I GACNNNGTC 1 cut(s) 230
VspI ATTAAT 1 cut(s) 1592
XagI CCTNNNNNAGG 1 cut(s) 465
XapI RAATTY 5 cut(s) 400, 1167, 1513, 1691, 2232
XceI RCATGY 1 cut(s) 1623
XcmI CCANNNNNNNNNTGG 2 cut(s) 945, 2598
XhoI CTCGAG 1 cut(s) 95
XmnI GAANNNNTTC 2 cut(s) 1695, 2568
ZrmI AGTACT 1 cut(s) 2650
Zsp2I ATGCAT 2 cut(s) 949, 1455
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.