AT1G51480

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
19090716 .. 19093478
2763 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G51480.1

Sequence Viewer

Length: 2565 bp
ATGGCGGATTGGCTTCTACTAATACCCTGGAACAAGATCTTCACTGCTGCATGTGGCTGCTTTTTTAGCGATAGAAACTACATTCACAAGATGGAGGCAAATCTCGATGATCTGCACACAACTATGGAAGAACTTAAGAATGGACGAGATGATTTGTTAAGAAGAGTTTCCATAGAAGAAGATAAAGGTTTGCAACAGCTTGCTCAAGTCAAAGGATGGATTTCAAGGGTAGAAATTGTTGAATCTAGATTCAAGGATCTGCTTGAGGATAAATCAACTGAAACTGGAAGATTGTGTTTGTTTGGATTTTGTTCTGAGAATTGCATATCAAGCTACAATTATGGTGAAAAGGTAATGAAGAATCTGGAAGAAGTTAAAGAACTTCTATCTAAAAAACATTTTGAAGTGGTGGCGCATAAGATTCCTGTACCTAAGGTAGAGGAGAAGAATATCCATACCACAGTTGGTTTGTATGCAATGGTTGAAATGGCATGGAAAAGCCTCATGAATGATGAAATAAGAACCTTGTGTCTTCATGGTATGGGGGGAGTAGGAAAAACCACACTCTTAGCTTGCATCAACAACAAATTCGTTGAACTGGAGAGTGAATTTGATGTTGTGATATGGGTTGTGGTATCTAAAGACTTTCAGCTTGAGGGTATTCAAGATCAGATTCTTGGTAGATTACGTCTCGACAAGGAATGGGAAAGAGAAACAGAAAATAAGAAAGCCTCACTCATAAACAATAACCTTAAGAGAAAAAAATTTGTGCTGTTGTTGGATGATCTCTGGAGCGAGGTAGATCTGAACAAGATAGGAGTTCCACCTCCAACTCGTGAAAATGGAGCGAAGATAGTTTTCACCAAACGTTCAAAGGAAGTTTCCAAGTACATGAAAGCTGACATGCAAATAAAAGTTTCTTGTTTGTCACCAGATGAAGCGTGGGAATTGTTTCGAATTACTGTTGATGATGTCATATTAAGCAGCCATGAAGATATTCCTGCACTCGCAAGAATAGTTGCTGCAAAATGTCATGGCTTGCCACTTGCACTCATTGTCATTGGGGAAGCCATGGCATGTAAAGAGACTATACAAGAATGGCATCATGCGATTAATGTTCTGAATTCGCCTGCAGGCCACAAGTTTCCAGGTATGGAAGAAAGAATTCTTCTCGTTTTGAAGTTCAGTTACGATAGCTTGAAGAATGGTGAAATCAAATTGTGTTTCCTATATTGTTCTTTGTTTCCTGAAGATTTTGAAATAGAGAAGGAGAAGTTGATAGAATACTGGATTTGCGAAGGATATATAAATCCGAACAGATATGAAGATGGAGGTACCAACCAAGGTTATGATATAATTGGCTTGTTAGTTCGTGCACATTTGTTGATTGAATGTGAACTCACCACCAAAGTTAAAATGCATTATGTGATACGTGAGATGGCTCTTTGGATAAATTCTGACTTTGGAAAACAGCAAGAAACAATCTGTGTGAAATCTGGTGCTCATGTACGTATGATACCGAATGACATCAATTGGGAGATTGTAAGACAAGTGTCTTTAATCAGTACTCAGATTGAGAAGATATCTTGTAGTTCCAAATGCTCCAACCTTTCAACCCTATTACTCCCGTATAACAAGTTGGTGAATATTTCAGTTGGATTCTTTCTGTTTATGCCAAAACTTGTGGTCTTGGATCTTTCTACAAACATGAGTCTTATTGAATTACCGGAGGAAATTTCTAACTTATGTTCTCTTCAATATCTTAATTTATCAAGCACAGGGATAAAATCGCTACCAGGTGGTATGAAGAAGTTGAGGAAACTAATCTACTTGAATCTGGAGTTCAGTTATAAACTTGAGAGTCTTGTTGGCATATCAGCAACCTTACCAAATCTGCAAGTGTTGAAATTATTTTATTCCAATGTTTGTGTTGATGACATATTAATGGAGGAACTACAACACATGGATCACTTGAAGATTTTAACGGTAACCATAGATGATGCCATGATTTTGGAAAGGATACAAGGTATTGACCGATTGGCGAGTAGTATTCGAGGTTTATGTCTAACAAATATGTCAGCACCTCGTGTAGTATTAAGTACGACAGCTCTGGGAGGTCTTCAACAACTTGCAATTCTGAGCTGCAACATATCTGAGATAAAGATGGATTGGAAAAGCAAAGAAAGAAGGGAGGTTTCACCAATGGAGATTCATCCATCTACAAGTACAAGTTCTCCAGGCTTCAAGCAACTCTCCAGTGTTAATATAATGAAATTGGTAGGGCCAAGGGATTTGTCATGGCTGTTATTTGCTCAAAATCTAAAGAGTCTACATGTGGGCTTTTCACCAGAAATAGAAGAAATTATAAATAAGGAGAAAGGATCGAGTATTACCAAAGAAATTGCCTTTGGAAAATTGGAATCACTTGTAATATATAAATTGCCTGAACTCAAGGAAATTTGCTGGAATTATCGGACTCTTCCTAACAGTAGATATTTTGATGTCAAAGATTGTCCAAAGCTACCTGAAGATATTGCTAATTTTCCCATGCATGCAGAGGAATAA

Protein Analysis

854

Amino Acids

97.31

Weight (kDa)

5.87

Isoelectric Point (pI)

49.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 159 - 322 2.9e-49 NB-ARC domain
WHD_DRP PF23559 414 - 481 9e-09 Disease resistance protein Winged helix domain
LRR_14 PF23598 515 - 713 2.1e-12 Leucine-rich repeat region
LRR_8 PF13855 535 - 594 1.7e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000363)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G12210 AT1G12210 AT1G12210 AT1G12220 AT1G12220 AT1G12220 AT1G12280 AT1G12280 AT1G12290 AT1G12290 AT1G12290 AT1G12290 AT1G15890 AT1G15890 AT1G51480 AT1G52660 AT1G52660 AT1G61180 AT1G61180 AT1G61190 AT1G61190 AT1G61190 AT1G61190 AT1G61300 AT1G61300 AT1G61310 AT3G15700 AT3G15700 AT4G10780 AT4G10780 AT5G43730 AT5G43730 AT5G43730 AT5G43730 AT5G43730 AT5G43740 AT5G43740 AT5G63020
fragaria_vesca FvH4_6g30050 FvH4_6g48220
malus_domestica MD09G1055800.v1.1 MD09G1198800.v1.1 MD17G1204800.v1.1 MD17G1204900.v1.1 MD17G1205000.v1.1 MD17G1205300.v1.1 MD17G1205700.v1.1 MD17G1205800.v1.1 MD17G1224100.v1.1
prunus_persica Prupe.3G054800_v2.0.a1 Prupe.3G054800_v2.0.a1 Prupe.3G080300_v2.0.a1 Prupe.3G080400_v2.0.a1 Prupe.3G080500_v2.0.a1 Prupe.3G080600_v2.0.a1 Prupe.3G080800_v2.0.a1 Prupe.3G083200_v2.0.a1 Prupe.3G099800_v2.0.a1 Prupe.3G099800_v2.0.a1
pyrus_communis pycom17g20860 pycom17g20910 pycom17g22790
rosa_chinensis RchiOBHm_Chr2g0136891 RchiOBHm_Chr2g0136901 RchiOBHm_Chr2g0167711 RchiOBHm_Chr2g0167721 RchiOBHm_Chr2g0167731 RchiOBHm_Chr4g0407611
rosa_laevigata RLG00000018943 RLG00000019278 RLG00000019282 RLG00000019587 RLG00000021748 RLG00000021749 RLG00000031057
rosa_multiflora Rmu_sc0002143.1_g000003 Rmu_sc0002782.1_g000001 Rmu_sc0023879.1_g000001 Rmu_sc0042171.1_g000001
rosa_roxburghii Rroxscaffold_2G00083300 Rroxscaffold_2G00107890 Rroxscaffold_2G00116680
rosa_rugosa Rorug02G0271700 Rorug02G0334900 Rorug02G0531800 Rorug02G0531800
rosa_samantha Rh2AG359900 Rh2AG385100 Rh2AG600500 Rh2AG600600 Rh2BG392200 Rh2BG611000 Rh2BG611100 Rh2BG611200 Rh2CG343100 Rh2CG343300 Rh2CG372300 Rh2CG581400 Rh2CG581500 Rh2DG382900 Rh2DG623700 Rh5AG027500 Rh5CG029900
rosa_wichuraiana Rw2G031490 Rw2G049850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1851, 2366
Acc65I GGTACC 1 cut(s) 1334
AccB1I GGYRCC 1 cut(s) 1334
AccI GTMKAC 1 cut(s) 2329
AciI CCGC 1 cut(s) 5
AclI AACGTT 1 cut(s) 868
AclWI GGATC 4 cut(s) 264, 1701, 1974, 2389
AcsI RAATTY 8 cut(s) 587, 608, 764, 1123, 1164, 1453, 1734, 2457
AcuI CTGAAG 2 cut(s) 1269, 2547
AdeI CACNNNGTG 1 cut(s) 2087
AfaI GTAC 7 cut(s) 429, 890, 1336, 1509, 1567, 2101, 2227
AflII CTTAAG 2 cut(s) 134, 752
AflIII ACRYGT 1 cut(s) 2332
AjnI CCWGG 4 cut(s) 26, 1147, 1795, 2236
AjuI GAANNNNNNNTTGG 2 cut(s) 2391, 2423
AluBI AGCT 9 cut(s) 199, 333, 572, 652, 899, 1197, 2108, 2142, 2521
AluI AGCT 9 cut(s) 199, 333, 572, 652, 899, 1197, 2108, 2142, 2521
Alw21I GWGCWC 2 cut(s) 1378, 1504
Alw26I GTCTC 2 cut(s) 695, 1079
Alw44I GTGCAC 1 cut(s) 1374
AlwI GGATC 4 cut(s) 264, 1701, 1974, 2389
AoxI GGCC 2 cut(s) 1135, 2282
ApaLI GTGCAC 1 cut(s) 1374
ApeKI GCWGC 5 cut(s) 47, 57, 984, 1022, 2142
ApoI RAATTY 8 cut(s) 587, 608, 764, 1123, 1164, 1453, 1734, 2457
AseI ATTAAT 2 cut(s) 1113, 1943
Asp700I GAANNNNTTC 4 cut(s) 166, 951, 996, 1164
Asp718I GGTACC 1 cut(s) 1334
AspLEI GCGC 1 cut(s) 415
AspS9I GGNCC 1 cut(s) 2282
AsuHPI GGTGA 8 cut(s) 356, 853, 921, 1220, 1393, 1654, 2190, 2337
AsuII TTCGAA 1 cut(s) 955
AxyI CCTNAGG 1 cut(s) 432
BaeGI GKGCMC 1 cut(s) 1378
BanI GGYRCC 1 cut(s) 1334
BarI GAAGNNNNNNTAC 2 cut(s) 1172, 1204
BauI CACGAG 2 cut(s) 834, 2085
BbsI GAAGAC 2 cut(s) 524, 2111
Bbv12I GWGCWC 2 cut(s) 1378, 1504
BbvI GCAGC 5 cut(s) 34, 44, 996, 1009, 2129
BccI CCATC 6 cut(s) 85, 210, 1322, 1432, 2158, 2224
BciT130I CCWGG 4 cut(s) 28, 1149, 1797, 2238
BciVI GTATCC 1 cut(s) 2013
BcoDI GTCTC 2 cut(s) 695, 1079
BfaI CTAG 1 cut(s) 246
BfmI CTRYAG 1 cut(s) 1131
BfrI CTTAAG 2 cut(s) 134, 752
BfuI GTATCC 1 cut(s) 2013
BglII AGATCT 2 cut(s) 36, 802
BisI GCNGC 5 cut(s) 48, 58, 985, 1023, 2143
BlsI GCNGC 5 cut(s) 49, 59, 986, 1024, 2144
BmcAI AGTACT 1 cut(s) 1567
Bme1390I CCNGG 4 cut(s) 28, 1149, 1797, 2238
BmgT120I GGNCC 1 cut(s) 2282
BmiI GGNNCC 1 cut(s) 1336
BmrFI CCNGG 4 cut(s) 28, 1149, 1797, 2238
BmsI GCATC 3 cut(s) 585, 1111, 1990
BoxI GACNNNNGTC 1 cut(s) 1552
BpiI GAAGAC 2 cut(s) 524, 2111
BpmI CTGGAG 5 cut(s) 620, 811, 1859, 2220, 2239
Bpu14I TTCGAA 1 cut(s) 955
BpuEI CTTGAG 5 cut(s) 189, 284, 674, 1877, 2435
BsaAI YACGTR 2 cut(s) 1433, 1511
BsaJI CCNNGG 4 cut(s) 26, 1071, 1342, 2285
BsaWI WCCGGW 1 cut(s) 1726
BsaXI ACNNNNNCTCC 2 cut(s) 2218, 2248
Bse1I ACTGG 4 cut(s) 289, 603, 1292, 2256
Bse21I CCTNAGG 1 cut(s) 432
Bse3DI GCAATG 1 cut(s) 483
BseBI CCWGG 4 cut(s) 28, 1149, 1797, 2238
BseDI CCNNGG 4 cut(s) 26, 1071, 1342, 2285
BseGI GGATG 3 cut(s) 221, 787, 2212
BseMI GCAATG 1 cut(s) 483
BseMII CTCAG 4 cut(s) 306, 1583, 2129, 2145
BseNI ACTGG 4 cut(s) 289, 603, 1292, 2256
BseRI GAGGAG 1 cut(s) 455
BseSI GKGCMC 1 cut(s) 1378
BseXI GCAGC 5 cut(s) 34, 44, 996, 1009, 2129
BsgI GTGCAG 2 cut(s) 98, 987
BshFI GGCC 2 cut(s) 1137, 2284
BshNI GGYRCC 1 cut(s) 1334
BsiHKAI GWGCWC 2 cut(s) 1378, 1504
BsiSI CCGG 1 cut(s) 1727
BsmAI GTCTC 2 cut(s) 695, 1079
BsmBI CGTCTC 1 cut(s) 695
BsnI GGCC 2 cut(s) 1137, 2284
Bsp119I TTCGAA 1 cut(s) 955
Bsp1286I GDGCHC 2 cut(s) 1378, 1504
Bsp143I GATC 9 cut(s) 36, 109, 256, 667, 784, 802, 1693, 1966, 2381
Bsp19I CCATGG 1 cut(s) 1071
BspACI CCGC 1 cut(s) 5
BspANI GGCC 2 cut(s) 1137, 2284
BspCNI CTCAG 4 cut(s) 307, 1582, 2130, 2146
BspHI TCATGA 1 cut(s) 504
BspLI GGNNCC 1 cut(s) 1336
BspMAI CTGCAG 1 cut(s) 1135
BspPI GGATC 4 cut(s) 264, 1701, 1974, 2389
BspT104I TTCGAA 1 cut(s) 955
BspT107I GGYRCC 1 cut(s) 1334
BspTI CTTAAG 2 cut(s) 134, 752
BsrDI GCAATG 1 cut(s) 483
BsrI ACTGG 4 cut(s) 289, 603, 1292, 2256
BssECI CCNNGG 4 cut(s) 26, 1071, 1342, 2285
BssMI GATC 9 cut(s) 36, 109, 256, 667, 784, 802, 1693, 1966, 2381
BssSI CACGAG 2 cut(s) 834, 2085
BssT1I CCWWGG 3 cut(s) 1071, 1342, 2285
Bst2BI CACGAG 2 cut(s) 834, 2085
Bst2UI CCWGG 4 cut(s) 28, 1149, 1797, 2238
Bst4CI ACNGT 4 cut(s) 463, 964, 1987, 2489
Bst6I CTCTTC 3 cut(s) 157, 1758, 2484
BstAFI CTTAAG 2 cut(s) 134, 752
BstBAI YACGTR 2 cut(s) 1433, 1511
BstBI TTCGAA 1 cut(s) 955
BstC8I GCNNGC 6 cut(s) 201, 574, 1040, 1131, 1135, 2553
BstDEI CTNAG 6 cut(s) 315, 432, 568, 1569, 2138, 2154
BstDSI CCRYGG 1 cut(s) 1071
BstEII GGTNACC 1 cut(s) 1987
BstF5I GGATG 3 cut(s) 221, 787, 2212
BstHHI GCGC 1 cut(s) 415
BstKTI GATC 9 cut(s) 39, 112, 259, 670, 787, 805, 1696, 1969, 2384
BstMAI GTCTC 2 cut(s) 695, 1079
BstMBI GATC 9 cut(s) 36, 109, 256, 667, 784, 802, 1693, 1966, 2381
BstMWI GCNNNNNNNGC 2 cut(s) 66, 330
BstNI CCWGG 4 cut(s) 28, 1149, 1797, 2238
BstNSI RCATGY 5 cut(s) 54, 907, 1080, 2336, 2555
BstPAI GACNNNNGTC 1 cut(s) 1552
BstPI GGTNACC 1 cut(s) 1987
BstSCI CCNGG 4 cut(s) 26, 1147, 1795, 2236
BstSFI CTRYAG 1 cut(s) 1131
BstSLI GKGCMC 1 cut(s) 1378
BstSNI TACGTA 1 cut(s) 1511
BstV1I GCAGC 5 cut(s) 34, 44, 996, 1009, 2129
BstV2I GAAGAC 2 cut(s) 524, 2111
BstX2I RGATCY 4 cut(s) 36, 256, 802, 1693
BstXI CCANNNNNNTGG 1 cut(s) 2011
BstYI RGATCY 4 cut(s) 36, 256, 802, 1693
Bsu36I CCTNAGG 1 cut(s) 432
BsuI GTATCC 1 cut(s) 2013
BsuRI GGCC 2 cut(s) 1137, 2284
BtgI CCRYGG 1 cut(s) 1071
BtsCI GGATG 3 cut(s) 221, 787, 2212
BtsI GCAGTG 1 cut(s) 42
BtsIMutI CAGTG 2 cut(s) 42, 2263
Cac8I GCNNGC 6 cut(s) 201, 574, 1040, 1131, 1135, 2553
CciI TCATGA 1 cut(s) 504
CfoI GCGC 1 cut(s) 415
Cfr13I GGNCC 1 cut(s) 2282
CsiI ACCWGGT 1 cut(s) 1795
Csp6I GTAC 7 cut(s) 428, 889, 1335, 1508, 1566, 2100, 2226
CspCI CAANNNNNGTGG 2 cut(s) 1665, 1700
CviQI GTAC 7 cut(s) 428, 889, 1335, 1508, 1566, 2100, 2226
DdeI CTNAG 6 cut(s) 315, 432, 568, 1569, 2138, 2154
DpnI GATC 9 cut(s) 38, 111, 258, 669, 786, 804, 1695, 1968, 2383
DpnII GATC 9 cut(s) 36, 109, 256, 667, 784, 802, 1693, 1966, 2381
DraIII CACNNNGTG 1 cut(s) 2087
Eam1104I CTCTTC 3 cut(s) 157, 1758, 2484
EarI CTCTTC 3 cut(s) 157, 1758, 2484
EciI GGCGGA 1 cut(s) 20
Eco105I TACGTA 1 cut(s) 1511
Eco130I CCWWGG 3 cut(s) 1071, 1342, 2285
Eco32I GATATC 1 cut(s) 1584
Eco57I CTGAAG 2 cut(s) 1269, 2547
Eco81I CCTNAGG 1 cut(s) 432
Eco91I GGTNACC 1 cut(s) 1987
EcoO65I GGTNACC 1 cut(s) 1987
EcoRI GAATTC 2 cut(s) 1123, 1164
EcoRII CCWGG 4 cut(s) 26, 1147, 1795, 2236
EcoRV GATATC 1 cut(s) 1584
EcoT14I CCWWGG 3 cut(s) 1071, 1342, 2285
EcoT22I ATGCAT 2 cut(s) 1422, 2553
ErhI CCWWGG 3 cut(s) 1071, 1342, 2285
Esp3I CGTCTC 1 cut(s) 695
FblI GTMKAC 1 cut(s) 2329
Fnu4HI GCNGC 5 cut(s) 48, 58, 985, 1023, 2143
FokI GGATG 3 cut(s) 228, 794, 2199
Fsp4HI GCNGC 5 cut(s) 48, 58, 985, 1023, 2143
FspBI CTAG 1 cut(s) 246
GlaI GCGC 1 cut(s) 414
GluI GCNGC 5 cut(s) 48, 58, 985, 1023, 2143
GsuI CTGGAG 5 cut(s) 620, 811, 1859, 2220, 2239
HaeIII GGCC 2 cut(s) 1137, 2284
HapII CCGG 1 cut(s) 1727
HhaI GCGC 1 cut(s) 415
Hin6I GCGC 1 cut(s) 413
HinP1I GCGC 1 cut(s) 413
HpaII CCGG 1 cut(s) 1727
HphI GGTGA 8 cut(s) 356, 853, 921, 1220, 1393, 1654, 2190, 2337
Hpy166II GTNNAC 3 cut(s) 1376, 1397, 2330
Hpy8I GTNNAC 3 cut(s) 1376, 1397, 2330
HpyAV CCTTC 3 cut(s) 1261, 1292, 2181
HpyCH4III ACNGT 4 cut(s) 463, 964, 1987, 2489
HpyCH4IV ACGT 4 cut(s) 688, 868, 1432, 1510
HpyF10VI GCNNNNNNNGC 2 cut(s) 66, 330
HpyF3I CTNAG 6 cut(s) 315, 432, 568, 1569, 2138, 2154
HpySE526I ACGT 4 cut(s) 688, 868, 1432, 1510
HspAI GCGC 1 cut(s) 413
KpnI GGTACC 1 cut(s) 1338
Kzo9I GATC 9 cut(s) 36, 109, 256, 667, 784, 802, 1693, 1966, 2381
LmnI GCTCC 3 cut(s) 792, 845, 1607
Lsp1109I GCAGC 5 cut(s) 34, 44, 996, 1009, 2129
LweI GCATC 3 cut(s) 585, 1111, 1990
MabI ACCWGGT 1 cut(s) 1795
MaeI CTAG 1 cut(s) 246
MaeII ACGT 4 cut(s) 688, 868, 1432, 1510
MaeIII GTNAC 3 cut(s) 927, 1187, 1987
MalI GATC 9 cut(s) 38, 111, 258, 669, 786, 804, 1695, 1968, 2383
MboI GATC 9 cut(s) 36, 109, 256, 667, 784, 802, 1693, 1966, 2381
MfeI CAATTG 1 cut(s) 1531
MflI RGATCY 4 cut(s) 36, 256, 802, 1693
MhlI GDGCHC 2 cut(s) 1378, 1504
MlyI GAGTC 4 cut(s) 1720, 1870, 2335, 2470
MmeI TCCRAC 4 cut(s) 759, 854, 1629, 1636
Mph1103I ATGCAT 2 cut(s) 1422, 2553
MroXI GAANNNNTTC 4 cut(s) 166, 951, 996, 1164
MslI CAYNNNNRTG 2 cut(s) 122, 1943
MspCI CTTAAG 2 cut(s) 134, 752
MspI CCGG 1 cut(s) 1727
MspR9I CCNGG 4 cut(s) 28, 1149, 1797, 2238
MunI CAATTG 1 cut(s) 1531
MvaI CCWGG 4 cut(s) 28, 1149, 1797, 2238
MwoI GCNNNNNNNGC 2 cut(s) 66, 330
NcoI CCATGG 1 cut(s) 1071
NdeII GATC 9 cut(s) 36, 109, 256, 667, 784, 802, 1693, 1966, 2381
NlaIV GGNNCC 1 cut(s) 1336
NmuCI GTSAC 1 cut(s) 927
NsiI ATGCAT 2 cut(s) 1422, 2553
NspI RCATGY 5 cut(s) 54, 907, 1080, 2336, 2555
NspV TTCGAA 1 cut(s) 955
PaeI GCATGC 1 cut(s) 2555
PagI TCATGA 1 cut(s) 504
PciI ACATGT 1 cut(s) 2332
PdmI GAANNNNTTC 4 cut(s) 166, 951, 996, 1164
PfeI GAWTC 9 cut(s) 242, 249, 361, 421, 673, 1659, 1834, 2209, 2420
PkrI GCNGC 5 cut(s) 49, 59, 986, 1024, 2144
PleI GAGTC 4 cut(s) 1719, 1869, 2334, 2470
PpsI GAGTC 4 cut(s) 1719, 1869, 2334, 2470
Ppu21I YACGTR 2 cut(s) 1433, 1511
PscI ACATGT 1 cut(s) 2332
PshAI GACNNNNGTC 1 cut(s) 1552
PshBI ATTAAT 2 cut(s) 1113, 1943
PsiI TTATAA 2 cut(s) 1851, 2366
Psp1406I AACGTT 1 cut(s) 868
Psp6I CCWGG 4 cut(s) 26, 1147, 1795, 2236
PspEI GGTNACC 1 cut(s) 1987
PspGI CCWGG 4 cut(s) 26, 1147, 1795, 2236
PspN4I GGNNCC 1 cut(s) 1336
PspPI GGNCC 1 cut(s) 2282
PstI CTGCAG 1 cut(s) 1135
PsuI RGATCY 4 cut(s) 36, 256, 802, 1693
RsaI GTAC 7 cut(s) 429, 890, 1336, 1509, 1567, 2101, 2227
RsaNI GTAC 7 cut(s) 428, 889, 1335, 1508, 1566, 2100, 2226
RseI CAYNNNNRTG 2 cut(s) 122, 1943
SatI GCNGC 5 cut(s) 48, 58, 985, 1023, 2143
Sau3AI GATC 9 cut(s) 36, 109, 256, 667, 784, 802, 1693, 1966, 2381
Sau96I GGNCC 1 cut(s) 2282
SbfI CCTGCAGG 1 cut(s) 1135
ScaI AGTACT 1 cut(s) 1567
SchI GAGTC 4 cut(s) 1720, 1870, 2335, 2470
ScrFI CCNGG 4 cut(s) 28, 1149, 1797, 2238
SdaI CCTGCAGG 1 cut(s) 1135
SduI GDGCHC 2 cut(s) 1378, 1504
SexAI ACCWGGT 1 cut(s) 1795
SfaNI GCATC 3 cut(s) 585, 1111, 1990
SfcI CTRYAG 1 cut(s) 1131
SfuI TTCGAA 1 cut(s) 955
SmiMI CAYNNNNRTG 2 cut(s) 122, 1943
SmlI CTYRAG 7 cut(s) 134, 204, 263, 653, 752, 1856, 2450
SmoI CTYRAG 7 cut(s) 134, 204, 263, 653, 752, 1856, 2450
SnaBI TACGTA 1 cut(s) 1511
SphI GCATGC 1 cut(s) 2555
Sse8387I CCTGCAGG 1 cut(s) 1135
SsiI CCGC 1 cut(s) 5
SspI AATATT 1 cut(s) 1648
SspMI CTAG 1 cut(s) 246
StyD4I CCNGG 4 cut(s) 26, 1147, 1795, 2236
StyI CCWWGG 3 cut(s) 1071, 1342, 2285
TaaI ACNGT 4 cut(s) 463, 964, 1987, 2489
TaiI ACGT 4 cut(s) 691, 871, 1435, 1513
TaqI TCGA 5 cut(s) 105, 693, 955, 2053, 2384
TaqII GACCGA 1 cut(s) 2049
TatI WGTACW 3 cut(s) 888, 1565, 2225
TfiI GAWTC 9 cut(s) 242, 249, 361, 421, 673, 1659, 1834, 2209, 2420
TscAI CASTG 2 cut(s) 49, 2263
TseFI GTSAC 1 cut(s) 927
TseI GCWGC 5 cut(s) 47, 57, 984, 1022, 2142
Tsp45I GTSAC 1 cut(s) 927
TspRI CASTG 2 cut(s) 49, 2263
Vha464I CTTAAG 2 cut(s) 134, 752
VneI GTGCAC 1 cut(s) 1374
VspI ATTAAT 2 cut(s) 1113, 1943
XapI RAATTY 8 cut(s) 587, 608, 764, 1123, 1164, 1453, 1734, 2457
XbaI TCTAGA 1 cut(s) 245
XceI RCATGY 5 cut(s) 54, 907, 1080, 2336, 2555
XcmI CCANNNNNNNNNTGG 2 cut(s) 461, 939
XmiI GTMKAC 1 cut(s) 2329
XmnI GAANNNNTTC 4 cut(s) 166, 951, 996, 1164
XspI CTAG 1 cut(s) 246
ZrmI AGTACT 1 cut(s) 1567
Zsp2I ATGCAT 2 cut(s) 1422, 2553
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.