AT3G15700

disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0000363
Physical Location & Seq
Reverse (-)
5320644 .. 5322432
1789 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G15700.1

Sequence Viewer

Length: 1140 bp
ATGGGGAAAGATTTCAAGAGTATGGTGACACGATGCATCTACGTCGGAAAAGAGAACGATAACGTGAAGAAGCTGAAAACCGCTACAGAGGAGCTCAAAGATTTACGCAACATTGTGATGAAAAGGGTCAAAATGTATGAAGACCAACAGAAGCTGAAGCGGCTCGAGAAAGTCCAAGTCTGGCTTAGACAAGCCGATGTAGCGATCAAAGAAGCAGAAGAAATGTTGATAACGTTGATGTCTTCCTCTTCTTCTAATGGATCGAGCATGATGAGTTTTCACAAGCTGGACAAGAAGCTTTGCAAGAAGCTGAAAGAGGTTCAGGAGATAAAGAGCAGAGGAACATTCGATGTGGTGGTTGAGAATAGTGGCATTGGTAGTGGATCGATGATGATTTCGAATGTTGATAGAGATGATCAGACGGTTGGGTTGGAGGCGGTTTCCGGGCTAGTGTGGAGGTGTATGACGGTGGATAACACCGGGATTATTGGGTTGTACGGCGTGGAAGGTGTTGGGAAGACGACGGTGTTGACTCAGGTAAACAACAGGTTGCTTCAGCACAAGTTAAATGGGTTTGACTTTGTGATTTGGGTGTTTGTGTCCAAGAATGTGAATCTTGAAAAGATTCAGGACACGATCCGAGAGAAGATAGGGTTTCTTGATAGGTCGTGGATGAGCAAGACAGAGGAAGAGAAAGCCGGTAAGATCTTCGAGATACTTAGCAAGAGACGATTCGCTTTATTCCTCGATGACGTTTGGGAGAAAGTCGATCTAGTGAAAGCTGGTGTGCCGCCTCCGGATGGACTGAACAGGTCTAAGATCGTGTTCACAACCTGTTCGGACGAGGTTTGTCAAGAAATGGGAGCACAAACTAAGATCAAAATGGAGAAGCTGCCATGGGAGAGAGCTTGGGACTTGTTTAAGATGAATGCTGGAGAAGAGATAGTGAAGAGCCACCCGGACATAACCAAAGTTGCTCAAGAGGTTGCAGCCAAGTGTGATGGCCTCCCGCTGGCTCTGGTCACAATTGGCCGAGCCATGGCCTCTAAGAAAACACCTCAGGAATGGCGTGACGCTTTGTACATCTTGAGTACCTCTCCTCCTAATTTCTCAGTTCTCAAGTTACTAGACAGGAACTAA

Protein Analysis

379

Amino Acids

42.92

Weight (kDa)

8.98

Isoelectric Point (pI)

33.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 155 - 313 9e-39 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000363)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G12210 AT1G12210 AT1G12210 AT1G12220 AT1G12220 AT1G12220 AT1G12280 AT1G12280 AT1G12290 AT1G12290 AT1G12290 AT1G12290 AT1G15890 AT1G15890 AT1G51480 AT1G52660 AT1G52660 AT1G61180 AT1G61180 AT1G61190 AT1G61190 AT1G61190 AT1G61190 AT1G61300 AT1G61300 AT1G61310 AT3G15700 AT3G15700 AT4G10780 AT4G10780 AT5G43730 AT5G43730 AT5G43730 AT5G43730 AT5G43730 AT5G43740 AT5G43740 AT5G63020
fragaria_vesca FvH4_6g30050 FvH4_6g48220
malus_domestica MD09G1055800.v1.1 MD09G1198800.v1.1 MD17G1204800.v1.1 MD17G1204900.v1.1 MD17G1205000.v1.1 MD17G1205300.v1.1 MD17G1205700.v1.1 MD17G1205800.v1.1 MD17G1224100.v1.1
prunus_persica Prupe.3G054800_v2.0.a1 Prupe.3G054800_v2.0.a1 Prupe.3G080300_v2.0.a1 Prupe.3G080400_v2.0.a1 Prupe.3G080500_v2.0.a1 Prupe.3G080600_v2.0.a1 Prupe.3G080800_v2.0.a1 Prupe.3G083200_v2.0.a1 Prupe.3G099800_v2.0.a1 Prupe.3G099800_v2.0.a1
pyrus_communis pycom17g20860 pycom17g20910 pycom17g22790
rosa_chinensis RchiOBHm_Chr2g0136891 RchiOBHm_Chr2g0136901 RchiOBHm_Chr2g0167711 RchiOBHm_Chr2g0167721 RchiOBHm_Chr2g0167731 RchiOBHm_Chr4g0407611
rosa_laevigata RLG00000018943 RLG00000019278 RLG00000019282 RLG00000019587 RLG00000021748 RLG00000021749 RLG00000031057
rosa_multiflora Rmu_sc0002143.1_g000003 Rmu_sc0002782.1_g000001 Rmu_sc0023879.1_g000001 Rmu_sc0042171.1_g000001
rosa_roxburghii Rroxscaffold_2G00083300 Rroxscaffold_2G00107890 Rroxscaffold_2G00116680
rosa_rugosa Rorug02G0271700 Rorug02G0334900 Rorug02G0531800 Rorug02G0531800
rosa_samantha Rh2AG359900 Rh2AG385100 Rh2AG600500 Rh2AG600600 Rh2BG392200 Rh2BG611000 Rh2BG611100 Rh2BG611200 Rh2CG343100 Rh2CG343300 Rh2CG372300 Rh2CG581400 Rh2CG581500 Rh2DG382900 Rh2DG623700 Rh5AG027500 Rh5CG029900
rosa_wichuraiana Rw2G031490 Rw2G049850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 796
AciI CCGC 5 cut(s) 81, 160, 437, 791, 1010
AclI AACGTT 1 cut(s) 233
AclWI GGATC 3 cut(s) 268, 391, 631
AcoI YGGCCR 1 cut(s) 1030
AcuI CTGAAG 2 cut(s) 176, 539
AfaI GTAC 3 cut(s) 497, 1082, 1093
AfiI CCNNNNNNNGG 3 cut(s) 800, 1012, 1039
AgsI TTSAA 2 cut(s) 16, 620
AluBI AGCT 9 cut(s) 73, 94, 154, 286, 298, 310, 782, 892, 908
AluI AGCT 9 cut(s) 73, 94, 154, 286, 298, 310, 782, 892, 908
Alw21I GWGCWC 2 cut(s) 96, 868
Alw26I GTCTC 1 cut(s) 721
AlwI GGATC 3 cut(s) 268, 391, 631
AlwNI CAGNNNCTG 1 cut(s) 154
Ama87I CYCGRG 1 cut(s) 164
Aor13HI TCCGGA 1 cut(s) 796
AoxI GGCC 3 cut(s) 1003, 1030, 1041
ApeKI GCWGC 2 cut(s) 892, 989
Asp700I GAANNNNTTC 2 cut(s) 11, 624
AsuC2I CCSGG 3 cut(s) 445, 481, 959
AsuHPI GGTGA 1 cut(s) 37
AsuII TTCGAA 1 cut(s) 398
AvaI CYCGRG 1 cut(s) 164
AxyI CCTNAGG 1 cut(s) 1059
BanII GRGCYC 1 cut(s) 96
BbsI GAAGAC 3 cut(s) 147, 234, 524
Bbv12I GWGCWC 2 cut(s) 96, 868
BbvI GCAGC 2 cut(s) 879, 1001
BccI CCATC 2 cut(s) 794, 995
BceAI ACGGC 1 cut(s) 514
BcgI CGANNNNNNTGC 2 cut(s) 25, 59
BclI TGATCA 1 cut(s) 415
BcnI CCSGG 3 cut(s) 445, 481, 959
BcoDI GTCTC 1 cut(s) 721
BfaI CTAG 3 cut(s) 449, 773, 1127
BfmI CTRYAG 1 cut(s) 84
BglII AGATCT 1 cut(s) 705
BisI GCNGC 4 cut(s) 161, 791, 893, 990
BlsI GCNGC 4 cut(s) 162, 792, 894, 991
Bme1390I CCNGG 3 cut(s) 445, 481, 959
BmeT110I CYCGRG 1 cut(s) 164
BmrFI CCNGG 3 cut(s) 445, 481, 959
BmsI GCATC 2 cut(s) 23, 45
BpiI GAAGAC 3 cut(s) 147, 234, 524
BplI GAGNNNNNCTC 2 cut(s) 1081, 1113
BpmI CTGGAG 1 cut(s) 954
Bpu14I TTCGAA 1 cut(s) 398
BpuEI CTTGAG 3 cut(s) 963, 1103, 1108
BpuMI CCSGG 3 cut(s) 445, 481, 959
Bsa29I ATCGAT 1 cut(s) 386
BsaJI CCNNGG 2 cut(s) 896, 1038
BsaWI WCCGGW 1 cut(s) 796
BsaXI ACNNNNNCTCC 2 cut(s) 1084, 1114
Bsc4I CCNNNNNNNGG 3 cut(s) 800, 1012, 1039
Bse118I RCCGGY 1 cut(s) 698
Bse21I CCTNAGG 1 cut(s) 1059
BseAI TCCGGA 1 cut(s) 796
BseCI ATCGAT 1 cut(s) 386
BseDI CCNNGG 2 cut(s) 896, 1038
BseGI GGATG 2 cut(s) 678, 805
BseLI CCNNNNNNNGG 3 cut(s) 800, 1012, 1039
BseMII CTCAG 3 cut(s) 548, 1073, 1125
BseRI GAGGAG 2 cut(s) 104, 1089
BseXI GCAGC 2 cut(s) 879, 1001
BshFI GGCC 3 cut(s) 1005, 1032, 1043
BshVI ATCGAT 1 cut(s) 386
BsiHKAI GWGCWC 2 cut(s) 96, 868
BsiHKCI CYCGRG 1 cut(s) 164
BsiSI CCGG 5 cut(s) 444, 480, 699, 797, 959
BslFI GGGAC 1 cut(s) 926
BslI CCNNNNNNNGG 3 cut(s) 800, 1012, 1039
BsmAI GTCTC 1 cut(s) 721
BsmBI CGTCTC 1 cut(s) 721
BsmFI GGGAC 1 cut(s) 926
BsmI GAATGC 1 cut(s) 934
BsnI GGCC 3 cut(s) 1005, 1032, 1043
BsoBI CYCGRG 1 cut(s) 164
Bsp119I TTCGAA 1 cut(s) 398
Bsp1286I GDGCHC 2 cut(s) 96, 868
Bsp13I TCCGGA 1 cut(s) 796
Bsp1407I TGTACA 1 cut(s) 1080
Bsp143I GATC 9 cut(s) 204, 260, 383, 415, 636, 705, 769, 819, 876
Bsp19I CCATGG 2 cut(s) 896, 1038
BspACI CCGC 5 cut(s) 81, 160, 437, 791, 1010
BspANI GGCC 3 cut(s) 1005, 1032, 1043
BspCNI CTCAG 3 cut(s) 547, 1072, 1124
BspDI ATCGAT 1 cut(s) 386
BspEI TCCGGA 1 cut(s) 796
BspPI GGATC 3 cut(s) 268, 391, 631
BspQI GCTCTTC 1 cut(s) 944
BspT104I TTCGAA 1 cut(s) 398
BsrFI RCCGGY 1 cut(s) 698
BsrGI TGTACA 1 cut(s) 1080
BssAI RCCGGY 1 cut(s) 698
BssECI CCNNGG 2 cut(s) 896, 1038
BssMI GATC 9 cut(s) 204, 260, 383, 415, 636, 705, 769, 819, 876
BssT1I CCWWGG 2 cut(s) 896, 1038
Bst4CI ACNGT 3 cut(s) 424, 469, 526
Bst6I CTCTTC 4 cut(s) 253, 684, 933, 944
BstAUI TGTACA 1 cut(s) 1080
BstBI TTCGAA 1 cut(s) 398
BstC8I GCNNGC 1 cut(s) 1014
BstDEI CTNAG 8 cut(s) 185, 534, 719, 816, 873, 1047, 1059, 1111
BstDSI CCRYGG 2 cut(s) 896, 1038
BstF5I GGATG 2 cut(s) 678, 805
BstKTI GATC 9 cut(s) 207, 263, 386, 418, 639, 708, 772, 822, 879
BstMAI GTCTC 1 cut(s) 721
BstMBI GATC 9 cut(s) 204, 260, 383, 415, 636, 705, 769, 819, 876
BstMWI GCNNNNNNNGC 2 cut(s) 160, 200
BstSCI CCNGG 3 cut(s) 443, 479, 957
BstSFI CTRYAG 1 cut(s) 84
BstV1I GCAGC 2 cut(s) 879, 1001
BstV2I GAAGAC 3 cut(s) 147, 234, 524
BstX2I RGATCY 1 cut(s) 705
BstYI RGATCY 1 cut(s) 705
Bsu15I ATCGAT 1 cut(s) 386
Bsu36I CCTNAGG 1 cut(s) 1059
BsuRI GGCC 3 cut(s) 1005, 1032, 1043
BsuTUI ATCGAT 1 cut(s) 386
BtgI CCRYGG 2 cut(s) 896, 1038
BtsCI GGATG 2 cut(s) 678, 805
Cac8I GCNNGC 1 cut(s) 1014
CaiI CAGNNNCTG 1 cut(s) 154
Cfr10I RCCGGY 1 cut(s) 698
ClaI ATCGAT 1 cut(s) 386
CseI GACGC 1 cut(s) 1082
Csp6I GTAC 3 cut(s) 496, 1081, 1092
CviAII CATG 3 cut(s) 268, 897, 1039
CviQI GTAC 3 cut(s) 496, 1081, 1092
DdeI CTNAG 8 cut(s) 185, 534, 719, 816, 873, 1047, 1059, 1111
DpnI GATC 9 cut(s) 206, 262, 385, 417, 638, 707, 771, 821, 878
DpnII GATC 9 cut(s) 204, 260, 383, 415, 636, 705, 769, 819, 876
EaeI YGGCCR 1 cut(s) 1030
Eam1104I CTCTTC 4 cut(s) 253, 684, 933, 944
EarI CTCTTC 4 cut(s) 253, 684, 933, 944
Ecl136II GAGCTC 1 cut(s) 94
Eco130I CCWWGG 2 cut(s) 896, 1038
Eco24I GRGCYC 1 cut(s) 96
Eco53kI GAGCTC 1 cut(s) 94
Eco57I CTGAAG 2 cut(s) 176, 539
Eco81I CCTNAGG 1 cut(s) 1059
Eco88I CYCGRG 1 cut(s) 164
EcoICRI GAGCTC 1 cut(s) 94
EcoT14I CCWWGG 2 cut(s) 896, 1038
EcoT22I ATGCAT 1 cut(s) 38
EcoT38I GRGCYC 1 cut(s) 96
ErhI CCWWGG 2 cut(s) 896, 1038
Esp3I CGTCTC 1 cut(s) 721
FaeI CATG 3 cut(s) 271, 900, 1042
FaiI YATR 7 cut(s) 23, 138, 269, 464, 898, 965, 1040
FalI AAGNNNNNCTT 2 cut(s) 168, 200
FaqI GGGAC 1 cut(s) 926
FatI CATG 3 cut(s) 267, 896, 1038
FauI CCCGC 1 cut(s) 1017
FbaI TGATCA 1 cut(s) 415
Fnu4HI GCNGC 4 cut(s) 161, 791, 893, 990
FokI GGATG 2 cut(s) 685, 812
FriOI GRGCYC 1 cut(s) 96
Fsp4HI GCNGC 4 cut(s) 161, 791, 893, 990
FspBI CTAG 3 cut(s) 449, 773, 1127
GluI GCNGC 4 cut(s) 161, 791, 893, 990
GsuI CTGGAG 1 cut(s) 954
HaeIII GGCC 3 cut(s) 1005, 1032, 1043
HapII CCGG 5 cut(s) 444, 480, 699, 797, 959
HgaI GACGC 1 cut(s) 1082
Hin1II CATG 3 cut(s) 271, 900, 1042
HincII GTYRAC 1 cut(s) 531
HindII GTYRAC 1 cut(s) 531
HindIII AAGCTT 1 cut(s) 296
HinfI GANTC 4 cut(s) 532, 613, 625, 732
HpaII CCGG 5 cut(s) 444, 480, 699, 797, 959
HphI GGTGA 1 cut(s) 37
Hpy166II GTNNAC 3 cut(s) 531, 541, 828
Hpy188I TCNGA 4 cut(s) 47, 420, 641, 841
Hpy8I GTNNAC 3 cut(s) 531, 541, 828
Hpy99I CGWCG 2 cut(s) 47, 526
HpyAV CCTTC 1 cut(s) 500
HpyCH4III ACNGT 3 cut(s) 424, 469, 526
HpyCH4IV ACGT 4 cut(s) 42, 63, 233, 753
HpyCH4V TGCA 3 cut(s) 36, 303, 989
HpyF10VI GCNNNNNNNGC 2 cut(s) 160, 200
HpyF3I CTNAG 8 cut(s) 185, 534, 719, 816, 873, 1047, 1059, 1111
HpySE526I ACGT 4 cut(s) 42, 63, 233, 753
Hsp92II CATG 3 cut(s) 271, 900, 1042
Kpn2I TCCGGA 1 cut(s) 796
Ksp22I TGATCA 1 cut(s) 415
Kzo9I GATC 9 cut(s) 204, 260, 383, 415, 636, 705, 769, 819, 876
LguI GCTCTTC 1 cut(s) 944
LmnI GCTCC 2 cut(s) 91, 863
Lsp1109I GCAGC 2 cut(s) 879, 1001
LweI GCATC 2 cut(s) 23, 45
MaeI CTAG 3 cut(s) 449, 773, 1127
MaeII ACGT 4 cut(s) 42, 63, 233, 753
MaeIII GTNAC 4 cut(s) 25, 1021, 1070, 1122
MalI GATC 9 cut(s) 206, 262, 385, 417, 638, 707, 771, 821, 878
MboI GATC 9 cut(s) 204, 260, 383, 415, 636, 705, 769, 819, 876
MfeI CAATTG 1 cut(s) 1026
MflI RGATCY 1 cut(s) 705
MhlI GDGCHC 2 cut(s) 96, 868
MluCI AATT 2 cut(s) 1026, 1105
MlyI GAGTC 1 cut(s) 526
MmeI TCCRAC 2 cut(s) 25, 411
Mph1103I ATGCAT 1 cut(s) 38
MroI TCCGGA 1 cut(s) 796
MroXI GAANNNNTTC 2 cut(s) 11, 624
MseI TTAA 2 cut(s) 566, 921
MslI CAYNNNNRTG 1 cut(s) 116
MspA1I CMGCKG 1 cut(s) 1012
MspI CCGG 5 cut(s) 444, 480, 699, 797, 959
MspR9I CCNGG 3 cut(s) 445, 481, 959
MunI CAATTG 1 cut(s) 1026
Mva1269I GAATGC 1 cut(s) 934
MwoI GCNNNNNNNGC 2 cut(s) 160, 200
NciI CCSGG 3 cut(s) 445, 481, 959
NcoI CCATGG 2 cut(s) 896, 1038
NdeII GATC 9 cut(s) 204, 260, 383, 415, 636, 705, 769, 819, 876
NlaIII CATG 3 cut(s) 271, 900, 1042
NmeAIII GCCGAG 1 cut(s) 1058
NmuCI GTSAC 3 cut(s) 25, 1021, 1070
NsiI ATGCAT 1 cut(s) 38
NspV TTCGAA 1 cut(s) 398
PaeR7I CTCGAG 1 cut(s) 164
PciSI GCTCTTC 1 cut(s) 944
PctI GAATGC 1 cut(s) 934
PdmI GAANNNNTTC 2 cut(s) 11, 624
PfeI GAWTC 3 cut(s) 613, 625, 732
PkrI GCNGC 4 cut(s) 162, 792, 894, 991
PleI GAGTC 1 cut(s) 526
PpsI GAGTC 1 cut(s) 526
Psp124BI GAGCTC 1 cut(s) 96
Psp1406I AACGTT 1 cut(s) 233
PstNI CAGNNNCTG 1 cut(s) 154
PsuI RGATCY 1 cut(s) 705
RsaI GTAC 3 cut(s) 497, 1082, 1093
RsaNI GTAC 3 cut(s) 496, 1081, 1092
RseI CAYNNNNRTG 1 cut(s) 116
SacI GAGCTC 1 cut(s) 96
SapI GCTCTTC 1 cut(s) 944
SaqAI TTAA 2 cut(s) 566, 921
SatI GCNGC 4 cut(s) 161, 791, 893, 990
Sau3AI GATC 9 cut(s) 204, 260, 383, 415, 636, 705, 769, 819, 876
SchI GAGTC 1 cut(s) 526
ScrFI CCNGG 3 cut(s) 445, 481, 959
SduI GDGCHC 2 cut(s) 96, 868
SfaNI GCATC 2 cut(s) 23, 45
SfcI CTRYAG 1 cut(s) 84
Sfr274I CTCGAG 1 cut(s) 164
SfuI TTCGAA 1 cut(s) 398
SlaI CTCGAG 1 cut(s) 164
SmiMI CAYNNNNRTG 1 cut(s) 116
SmlI CTYRAG 4 cut(s) 164, 978, 1087, 1118
SmoI CTYRAG 4 cut(s) 164, 978, 1087, 1118
Sse9I AATT 2 cut(s) 1026, 1105
SsiI CCGC 5 cut(s) 81, 160, 437, 791, 1010
SspMI CTAG 3 cut(s) 449, 773, 1127
SstI GAGCTC 1 cut(s) 96
StyD4I CCNGG 3 cut(s) 443, 479, 957
StyI CCWWGG 2 cut(s) 896, 1038
TaaI ACNGT 3 cut(s) 424, 469, 526
TaiI ACGT 4 cut(s) 45, 66, 236, 756
TaqI TCGA 8 cut(s) 165, 263, 348, 386, 398, 711, 747, 768
TasI AATT 2 cut(s) 1026, 1105
TatI WGTACW 1 cut(s) 1080
TauI GCSGC 2 cut(s) 163, 793
TfiI GAWTC 3 cut(s) 613, 625, 732
Tru1I TTAA 2 cut(s) 566, 921
Tru9I TTAA 2 cut(s) 566, 921
TseFI GTSAC 3 cut(s) 25, 1021, 1070
TseI GCWGC 2 cut(s) 892, 989
Tsp45I GTSAC 3 cut(s) 25, 1021, 1070
TspDTI ATGAA 3 cut(s) 134, 153, 941
XhoI CTCGAG 1 cut(s) 164
XmnI GAANNNNTTC 2 cut(s) 11, 624
XspI CTAG 3 cut(s) 449, 773, 1127
Zsp2I ATGCAT 1 cut(s) 38
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.