AT5G43730

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
17560179 .. 17564434
4256 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G43730.5

Sequence Viewer

Length: 2547 bp
ATGGTGGACTGGCTTTCACTATTACCCTGGAATAAAATCTTCACTGCTGCATGTGGCTGCTTTTTAAGCGATAGCAACTACATTCACTTGATGGAGTCAAATCTCGATGCTCTGCAGAAAACTATGGAAGAACTTAAGAATGGGCGAGATGATCTGTTAGCAAGAGTTTCCATAGAAGAAGATAAAGGTTTGCAACGGCTTGCTCTAGTCAACGGATGGCTTTCAAGGGTACAAATTGTTGAATCCGAATTCAAGGATCTGCTTGAGGCTATGTCAATCGAAACTGGAAGATTGTGTCTATTTGGATATTGTTCTGAGGATTGCATATCAAGCTACAATTATGGTGGAAAGGTAATGAAGAATTTGGAAGAAGTTAAAGAACTTCTATCTAAAAAGAATTTTGAAGTGGTGGCGCAGAAAATCATACCTAAGGCAGAGAAGAAGCATATACAAACCACAGTTGGTTTGGATACAATGGTTGGAATAGCATGGGAAAGCCTCATAGACGATGAAATAAGAACCTTGGGTCTTTATGGTATGGGGGGAATAGGAAAAACCACCCTCTTAGAAAGTCTCAACAACAAATTTGTTGAACTGGAGAGTGAATTTGATGTAGTGATATGGGTTGTGGTATCTAAAGACTTTCAGTTGGAGGGCATTCAAGATCAGATTCTGGGGAGATTACGTCCTGACAAGGAATGGGAAAGAGAAACAGAAAGTAAGAAAGCCTCTCTCATAAACAATAACCTTAAGAGAAAGAAATTTGTGTTGTTGTTGGATGATCTCTGGAGCGAAGTAGATCTAATTAAGATAGGAGTTCCACCTCCAAGTCGAGAAAATGGATCGAAGATAGTTTTCACCACACGTTCAAAGGAAGTTTGCAAGCACATGAAAGCTGACAAGCAGATAAAAGTTGACTGTTTGTCACCAGATGAAGCGTGGGAATTGTTTCGACTCACTGTTGGAGATATCATATTAAGGAGCCATCAAGATATTCCCGCACTTGCAAGAATAGTTGCTGCAAAATGCCATGGCTTGCCACTTGCACTCAATGTCATTGGCAAAGCCATGGTATGTAAAGAGACTGTACAAGAATGGCGTCATGCGATTAATGTTCTGAATTCGCCTGGCCACAAGTTTCCAGGTATGGAAGAAAGAATTCTTCCCATTTTGAAGTTCAGTTATGATAGCTTAAAGAATGGTGAAATCAAATTGTGCTTCCTATATTGTTCTCTGTTTCCTGAAGATTTTGAAATAGAGAAGGATAAGTTGATAGAATATTGGATTTGCGAAGGATATATAAATCCGAACAGATATGAAGATGGAGGTACTAACCAAGGTTATGATATAATTGGCTTGTTAGTTCGTGCACATTTGTTGATTGAATGTGAACTCACAGACAAAGTTAAAATGCATGATGTGATACGTGAGATGGCTCTTTGGATAAATTCTGACTTCGGAAATCAGCAAGAAACAATTTGTGTGAAATCTGGTGCTCATGTACGTCTGATACCAAATGACATCAGTTGGGAGATTGTGAGACAGATGTCTTTAATTAGTACTCAGGTTGAGAAGATAGCTTGCAGTCCCAACTGCCCCAACCTTTCAACCCTATTACTCCCATATAACAAGTTGGTGGATATTTCAGTTGGATTCTTTCTGTTTATGCCAAAACTTGTGGTCTTGGATCTTTCTACAAACTGGAGTCTTATTGAATTGCCGGAAGAAATTTCTAACCTAGGCTCCCTGCAATATCTCAATTTATCACTCACAGGGATAAAATCGCTACCAGTTGGTCTGAAGAAGTTGAGGAAACTAATCTACTTGAATCTGGAGTTCACTAATGTACTTGAGAGTCTTGTTGGAATAGCAACAACTTTACCAAATCTGCAAGTGTTGAAATTATTTTATTCTCTTTTTTGTGTTGATGACATAATTATGGAGGAACTACAGCGCTTGAAGCACTTGAAGATTTTAACAGCAACCATAGAGGATGCCATGATTTTGGAAAGGGTACAAGGAGTTGACCGATTGGCGAGTAGTATTCGAGGTTTATGTCTAAGAAACATGTCAGCACCTCGTGTAATATTAAACTCGGTAGCTCTGGGAGGTCTTCAACAACTTGGAATTGTGAGCTGCAACATATCTGAGATAGAGATAGATTGGTTAAGCAAAGAAAGAAGGGATCATCGATCTACAAGTTCTCCAGGCTTCAAGCAACTCGCCAGTATTACTGTAATCGGTTTGGTAGGGCCAAGGGATTTGTCATGGCTGTTATTTGCTCAAAATCTGAAGGATATACAAGTGCAATATTCACCAACAATAGAAGAAATAATAAATAAGCAGAAAGGAATGAGTATTACCAAAGTGCATCGAGATATTGTTGTTCCCTTTGGGAAGCTGGAATCCCTTCATCTATATCAATTGGCTGAGCTTACAGAAATCTGCTGGAATTATCAGACTCTTCCTAACCTTAGAGAATCCTATGTCAATTATTGTCCAAAGCTACTTGAAGATATAGCTAATTTTCCCAAGCTGAAAGGGTGA

Protein Analysis

848

Amino Acids

96.27

Weight (kDa)

5.68

Isoelectric Point (pI)

43.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 157 - 322 2.4e-50 NB-ARC domain
WHD_DRP PF23559 412 - 479 8.1e-10 Disease resistance protein Winged helix domain
LRR_8 PF13855 533 - 589 9.4e-09 Leucine rich repeat
LRR_14 PF23598 544 - 666 3.5e-11 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000363)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G12210 AT1G12210 AT1G12210 AT1G12220 AT1G12220 AT1G12220 AT1G12280 AT1G12280 AT1G12290 AT1G12290 AT1G12290 AT1G12290 AT1G15890 AT1G15890 AT1G51480 AT1G52660 AT1G52660 AT1G61180 AT1G61180 AT1G61190 AT1G61190 AT1G61190 AT1G61190 AT1G61300 AT1G61300 AT1G61310 AT3G15700 AT3G15700 AT4G10780 AT4G10780 AT5G43730 AT5G43730 AT5G43730 AT5G43730 AT5G43730 AT5G43740 AT5G43740 AT5G63020
fragaria_vesca FvH4_6g30050 FvH4_6g48220
malus_domestica MD09G1055800.v1.1 MD09G1198800.v1.1 MD17G1204800.v1.1 MD17G1204900.v1.1 MD17G1205000.v1.1 MD17G1205300.v1.1 MD17G1205700.v1.1 MD17G1205800.v1.1 MD17G1224100.v1.1
prunus_persica Prupe.3G054800_v2.0.a1 Prupe.3G054800_v2.0.a1 Prupe.3G080300_v2.0.a1 Prupe.3G080400_v2.0.a1 Prupe.3G080500_v2.0.a1 Prupe.3G080600_v2.0.a1 Prupe.3G080800_v2.0.a1 Prupe.3G083200_v2.0.a1 Prupe.3G099800_v2.0.a1 Prupe.3G099800_v2.0.a1
pyrus_communis pycom17g20860 pycom17g20910 pycom17g22790
rosa_chinensis RchiOBHm_Chr2g0136891 RchiOBHm_Chr2g0136901 RchiOBHm_Chr2g0167711 RchiOBHm_Chr2g0167721 RchiOBHm_Chr2g0167731 RchiOBHm_Chr4g0407611
rosa_laevigata RLG00000018943 RLG00000019278 RLG00000019282 RLG00000019587 RLG00000021748 RLG00000021749 RLG00000031057
rosa_multiflora Rmu_sc0002143.1_g000003 Rmu_sc0002782.1_g000001 Rmu_sc0023879.1_g000001 Rmu_sc0042171.1_g000001
rosa_roxburghii Rroxscaffold_2G00083300 Rroxscaffold_2G00107890 Rroxscaffold_2G00116680
rosa_rugosa Rorug02G0271700 Rorug02G0334900 Rorug02G0531800 Rorug02G0531800
rosa_samantha Rh2AG359900 Rh2AG385100 Rh2AG600500 Rh2AG600600 Rh2BG392200 Rh2BG611000 Rh2BG611100 Rh2BG611200 Rh2CG343100 Rh2CG343300 Rh2CG372300 Rh2CG581400 Rh2CG581500 Rh2DG382900 Rh2DG623700 Rh5AG027500 Rh5CG029900
rosa_wichuraiana Rw2G031490 Rw2G049850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 999
AclWI GGATC 4 cut(s) 264, 850, 1695, 2193
AcoI YGGCCR 1 cut(s) 1129
AcuI CTGAAG 3 cut(s) 1263, 1820, 2312
AcyI GRCGYC 1 cut(s) 1099
AdeI CACNNNGTG 1 cut(s) 2081
AfaI GTAC 7 cut(s) 231, 1089, 1330, 1503, 1561, 1848, 2016
AfeI AGCGCT 1 cut(s) 1955
AflII CTTAAG 2 cut(s) 134, 749
AflIII ACRYGT 2 cut(s) 863, 2067
AhdI GACNNNNNGTC 1 cut(s) 922
AjnI CCWGG 4 cut(s) 26, 1126, 1141, 2206
Alw21I GWGCWC 2 cut(s) 1372, 1498
Alw26I GTCTC 3 cut(s) 578, 1076, 1534
Alw44I GTGCAC 1 cut(s) 1368
AlwI GGATC 4 cut(s) 264, 850, 1695, 2193
AlwNI CAGNNNCTG 1 cut(s) 673
Aor51HI AGCGCT 1 cut(s) 1955
AoxI GGCC 2 cut(s) 1129, 2252
ApaLI GTGCAC 1 cut(s) 1368
ApeKI GCWGC 4 cut(s) 47, 57, 1019, 2136
AseI ATTAAT 1 cut(s) 1110
Asp700I GAANNNNTTC 3 cut(s) 948, 1158, 2409
AspA2I CCTAGG 1 cut(s) 1738
AspLEI GCGC 2 cut(s) 415, 1956
AspS9I GGNCC 1 cut(s) 2252
AsuHPI GGTGA 4 cut(s) 850, 918, 1214, 2307
AvrII CCTAGG 1 cut(s) 1738
AxyI CCTNAGG 1 cut(s) 429
BaeGI GKGCMC 1 cut(s) 1372
BaeI ACNNNNGTAYC 2 cut(s) 462, 495
BalI TGGCCA 1 cut(s) 1131
BauI CACGAG 1 cut(s) 2079
BbsI GAAGAC 1 cut(s) 2105
Bbv12I GWGCWC 2 cut(s) 1372, 1498
BbvI GCAGC 4 cut(s) 34, 44, 1006, 2123
BccI CCATC 5 cut(s) 85, 210, 993, 1316, 1426
BceAI ACGGC 1 cut(s) 212
BciT130I CCWGG 4 cut(s) 28, 1128, 1143, 2208
BciVI GTATCC 1 cut(s) 463
BcoDI GTCTC 3 cut(s) 578, 1076, 1534
BfaI CTAG 2 cut(s) 206, 1739
BfmI CTRYAG 2 cut(s) 113, 1949
BfoI RGCGCY 1 cut(s) 1957
BfrI CTTAAG 2 cut(s) 134, 749
BfuI GTATCC 1 cut(s) 463
BglII AGATCT 1 cut(s) 799
BisI GCNGC 4 cut(s) 48, 58, 1020, 2137
BlnI CCTAGG 1 cut(s) 1738
BlpI GCTNAGC 1 cut(s) 2430
BlsI GCNGC 4 cut(s) 49, 59, 1021, 2138
BmcAI AGTACT 1 cut(s) 1561
Bme1390I CCNGG 4 cut(s) 28, 1128, 1143, 2208
BmeRI GACNNNNNGTC 1 cut(s) 922
BmgT120I GGNCC 1 cut(s) 2252
BmiI GGNNCC 2 cut(s) 983, 1744
BmrFI CCNGG 4 cut(s) 28, 1128, 1143, 2208
BmsI GCATC 3 cut(s) 97, 1984, 2380
BoxI GACNNNNGTC 1 cut(s) 1546
BpiI GAAGAC 1 cut(s) 2105
BpmI CTGGAG 5 cut(s) 617, 808, 1723, 1853, 2190
Bpu1102I GCTNAGC 1 cut(s) 2430
BpuEI CTTGAG 2 cut(s) 284, 1871
Bsa29I ATCGAT 1 cut(s) 2191
BsaAI YACGTR 1 cut(s) 1427
BsaHI GRCGYC 1 cut(s) 1099
BsaJI CCNNGG 7 cut(s) 26, 522, 1030, 1068, 1336, 1738, 2255
BsaXI ACNNNNNCTCC 6 cut(s) 670, 700, 1727, 1757, 2188, 2218
Bse1I ACTGG 6 cut(s) 14, 289, 600, 1706, 1790, 2226
Bse21I CCTNAGG 1 cut(s) 429
BseBI CCWGG 4 cut(s) 28, 1128, 1143, 2208
BseCI ATCGAT 1 cut(s) 2191
BseDI CCNNGG 7 cut(s) 26, 522, 1030, 1068, 1336, 1738, 2255
BseGI GGATG 3 cut(s) 221, 784, 1999
BseMII CTCAG 4 cut(s) 306, 1577, 2139, 2421
BseNI ACTGG 6 cut(s) 14, 289, 600, 1706, 1790, 2226
BseSI GKGCMC 1 cut(s) 1372
BseXI GCAGC 4 cut(s) 34, 44, 1006, 2123
BshFI GGCC 2 cut(s) 1131, 2254
BshVI ATCGAT 1 cut(s) 2191
BsiHKAI GWGCWC 2 cut(s) 1372, 1498
BsiSI CCGG 1 cut(s) 1721
BslFI GGGAC 1 cut(s) 1572
BsmAI GTCTC 3 cut(s) 578, 1076, 1534
BsmFI GGGAC 1 cut(s) 1572
BsmI GAATGC 1 cut(s) 657
BsnI GGCC 2 cut(s) 1131, 2254
Bsp1286I GDGCHC 2 cut(s) 1372, 1498
Bsp1407I TGTACA 1 cut(s) 1087
Bsp143I GATC 9 cut(s) 151, 256, 664, 781, 799, 842, 1687, 2185, 2192
Bsp1720I GCTNAGC 1 cut(s) 2430
Bsp19I CCATGG 2 cut(s) 1030, 1068
BspACI CCGC 1 cut(s) 999
BspANI GGCC 2 cut(s) 1131, 2254
BspCNI CTCAG 4 cut(s) 307, 1576, 2140, 2422
BspDI ATCGAT 1 cut(s) 2191
BspLI GGNNCC 2 cut(s) 983, 1744
BspMAI CTGCAG 1 cut(s) 117
BspPI GGATC 4 cut(s) 264, 850, 1695, 2193
BspTI CTTAAG 2 cut(s) 134, 749
BsrGI TGTACA 1 cut(s) 1087
BsrI ACTGG 6 cut(s) 14, 289, 600, 1706, 1790, 2226
BssECI CCNNGG 7 cut(s) 26, 522, 1030, 1068, 1336, 1738, 2255
BssMI GATC 9 cut(s) 151, 256, 664, 781, 799, 842, 1687, 2185, 2192
BssNI GRCGYC 1 cut(s) 1099
BssSI CACGAG 1 cut(s) 2079
BssT1I CCWWGG 6 cut(s) 522, 1030, 1068, 1336, 1738, 2255
Bst2BI CACGAG 1 cut(s) 2079
Bst2UI CCWGG 4 cut(s) 28, 1128, 1143, 2208
Bst4CI ACNGT 5 cut(s) 460, 920, 961, 1087, 2236
Bst6I CTCTTC 1 cut(s) 2469
BstACI GRCGYC 1 cut(s) 1099
BstAFI CTTAAG 2 cut(s) 134, 749
BstAUI TGTACA 1 cut(s) 1087
BstBAI YACGTR 1 cut(s) 1427
BstC8I GCNNGC 4 cut(s) 201, 884, 1037, 1582
BstDEI CTNAG 8 cut(s) 315, 429, 565, 1563, 2060, 2148, 2430, 2474
BstDSI CCRYGG 2 cut(s) 1030, 1068
BstF5I GGATG 3 cut(s) 221, 784, 1999
BstH2I RGCGCY 1 cut(s) 1957
BstHHI GCGC 2 cut(s) 415, 1956
BstKTI GATC 9 cut(s) 154, 259, 667, 784, 802, 845, 1690, 2188, 2195
BstMAI GTCTC 3 cut(s) 578, 1076, 1534
BstMBI GATC 9 cut(s) 151, 256, 664, 781, 799, 842, 1687, 2185, 2192
BstMWI GCNNNNNNNGC 3 cut(s) 66, 330, 1960
BstNI CCWGG 4 cut(s) 28, 1128, 1143, 2208
BstNSI RCATGY 2 cut(s) 54, 2071
BstPAI GACNNNNGTC 1 cut(s) 1546
BstSCI CCNGG 4 cut(s) 26, 1126, 1141, 2206
BstSFI CTRYAG 2 cut(s) 113, 1949
BstSLI GKGCMC 1 cut(s) 1372
BstV1I GCAGC 4 cut(s) 34, 44, 1006, 2123
BstV2I GAAGAC 1 cut(s) 2105
BstX2I RGATCY 3 cut(s) 256, 799, 1687
BstXI CCANNNNNNTGG 1 cut(s) 2005
BstYI RGATCY 3 cut(s) 256, 799, 1687
Bsu15I ATCGAT 1 cut(s) 2191
Bsu36I CCTNAGG 1 cut(s) 429
BsuI GTATCC 1 cut(s) 463
BsuRI GGCC 2 cut(s) 1131, 2254
BsuTUI ATCGAT 1 cut(s) 2191
BtgI CCRYGG 2 cut(s) 1030, 1068
BtsCI GGATG 3 cut(s) 221, 784, 1999
BtsI GCAGTG 1 cut(s) 42
BtsIMutI CAGTG 2 cut(s) 42, 957
Cac8I GCNNGC 4 cut(s) 201, 884, 1037, 1582
CaiI CAGNNNCTG 1 cut(s) 673
CfoI GCGC 2 cut(s) 415, 1956
Cfr13I GGNCC 1 cut(s) 2252
ClaI ATCGAT 1 cut(s) 2191
CseI GACGC 1 cut(s) 1088
Csp6I GTAC 7 cut(s) 230, 1088, 1329, 1502, 1560, 1847, 2015
CspCI CAANNNNNGTGG 4 cut(s) 325, 360, 1659, 1694
CviQI GTAC 7 cut(s) 230, 1088, 1329, 1502, 1560, 1847, 2015
DdeI CTNAG 8 cut(s) 315, 429, 565, 1563, 2060, 2148, 2430, 2474
DpnI GATC 9 cut(s) 153, 258, 666, 783, 801, 844, 1689, 2187, 2194
DpnII GATC 9 cut(s) 151, 256, 664, 781, 799, 842, 1687, 2185, 2192
DraIII CACNNNGTG 1 cut(s) 2081
DriI GACNNNNNGTC 1 cut(s) 922
EaeI YGGCCR 1 cut(s) 1129
Eam1104I CTCTTC 1 cut(s) 2469
Eam1105I GACNNNNNGTC 1 cut(s) 922
EarI CTCTTC 1 cut(s) 2469
Eco130I CCWWGG 6 cut(s) 522, 1030, 1068, 1336, 1738, 2255
Eco32I GATATC 1 cut(s) 970
Eco47III AGCGCT 1 cut(s) 1955
Eco57I CTGAAG 3 cut(s) 1263, 1820, 2312
Eco81I CCTNAGG 1 cut(s) 429
EcoRI GAATTC 3 cut(s) 248, 1120, 1158
EcoRII CCWGG 4 cut(s) 26, 1126, 1141, 2206
EcoRV GATATC 1 cut(s) 970
EcoT14I CCWWGG 6 cut(s) 522, 1030, 1068, 1336, 1738, 2255
EcoT22I ATGCAT 1 cut(s) 1416
ErhI CCWWGG 6 cut(s) 522, 1030, 1068, 1336, 1738, 2255
FaqI GGGAC 1 cut(s) 1572
FauI CCCGC 1 cut(s) 1006
Fnu4HI GCNGC 4 cut(s) 48, 58, 1020, 2137
FokI GGATG 3 cut(s) 228, 791, 2006
Fsp4HI GCNGC 4 cut(s) 48, 58, 1020, 2137
FspBI CTAG 2 cut(s) 206, 1739
GlaI GCGC 2 cut(s) 414, 1955
GluI GCNGC 4 cut(s) 48, 58, 1020, 2137
GsuI CTGGAG 5 cut(s) 617, 808, 1723, 1853, 2190
HaeII RGCGCY 1 cut(s) 1957
HaeIII GGCC 2 cut(s) 1131, 2254
HapII CCGG 1 cut(s) 1721
HgaI GACGC 1 cut(s) 1088
HhaI GCGC 2 cut(s) 415, 1956
Hin1I GRCGYC 1 cut(s) 1099
Hin6I GCGC 2 cut(s) 413, 1954
HinP1I GCGC 2 cut(s) 413, 1954
HincII GTYRAC 3 cut(s) 211, 916, 2026
HindII GTYRAC 3 cut(s) 211, 916, 2026
HpaII CCGG 1 cut(s) 1721
HphI GGTGA 4 cut(s) 850, 918, 1214, 2307
Hpy166II GTNNAC 7 cut(s) 7, 211, 916, 1370, 1391, 1839, 2026
Hpy188III TCNNGA 9 cut(s) 104, 662, 689, 787, 833, 989, 1241, 1832, 2375
Hpy8I GTNNAC 7 cut(s) 7, 211, 916, 1370, 1391, 1839, 2026
HpyAV CCTTC 5 cut(s) 1255, 1286, 2175, 2287, 2420
HpyCH4III ACNGT 5 cut(s) 460, 920, 961, 1087, 2236
HpyCH4IV ACGT 4 cut(s) 685, 865, 1426, 1504
HpyF10VI GCNNNNNNNGC 3 cut(s) 66, 330, 1960
HpyF3I CTNAG 8 cut(s) 315, 429, 565, 1563, 2060, 2148, 2430, 2474
HpySE526I ACGT 4 cut(s) 685, 865, 1426, 1504
Hsp92I GRCGYC 1 cut(s) 1099
HspAI GCGC 2 cut(s) 413, 1954
Kzo9I GATC 9 cut(s) 151, 256, 664, 781, 799, 842, 1687, 2185, 2192
LmnI GCTCC 3 cut(s) 789, 981, 1748
Lsp1109I GCAGC 4 cut(s) 34, 44, 1006, 2123
LweI GCATC 3 cut(s) 97, 1984, 2380
MaeI CTAG 2 cut(s) 206, 1739
MaeII ACGT 4 cut(s) 685, 865, 1426, 1504
MaeIII GTNAC 1 cut(s) 924
MalI GATC 9 cut(s) 153, 258, 666, 783, 801, 844, 1689, 2187, 2194
MboI GATC 9 cut(s) 151, 256, 664, 781, 799, 842, 1687, 2185, 2192
MfeI CAATTG 1 cut(s) 2423
MflI RGATCY 3 cut(s) 256, 799, 1687
MhlI GDGCHC 2 cut(s) 1372, 1498
MlsI TGGCCA 1 cut(s) 1131
MluNI TGGCCA 1 cut(s) 1131
MlyI GAGTC 5 cut(s) 104, 948, 1714, 1864, 2455
MmeI TCCRAC 6 cut(s) 460, 630, 756, 943, 1630, 1843
Mox20I TGGCCA 1 cut(s) 1131
Mph1103I ATGCAT 1 cut(s) 1416
MroXI GAANNNNTTC 3 cut(s) 948, 1158, 2409
MscI TGGCCA 1 cut(s) 1131
MslI CAYNNNNRTG 1 cut(s) 1937
Msp20I TGGCCA 1 cut(s) 1131
MspCI CTTAAG 2 cut(s) 134, 749
MspI CCGG 1 cut(s) 1721
MspR9I CCNGG 4 cut(s) 28, 1128, 1143, 2208
MunI CAATTG 1 cut(s) 2423
Mva1269I GAATGC 1 cut(s) 657
MvaI CCWGG 4 cut(s) 28, 1128, 1143, 2208
MwoI GCNNNNNNNGC 3 cut(s) 66, 330, 1960
NcoI CCATGG 2 cut(s) 1030, 1068
NdeII GATC 9 cut(s) 151, 256, 664, 781, 799, 842, 1687, 2185, 2192
NlaIV GGNNCC 2 cut(s) 983, 1744
NmuCI GTSAC 1 cut(s) 924
NsiI ATGCAT 1 cut(s) 1416
NspI RCATGY 2 cut(s) 54, 2071
PciI ACATGT 1 cut(s) 2067
PctI GAATGC 1 cut(s) 657
PdmI GAANNNNTTC 3 cut(s) 948, 1158, 2409
PfeI GAWTC 6 cut(s) 242, 670, 1653, 1828, 2405, 2480
PkrI GCNGC 4 cut(s) 49, 59, 1021, 2138
PleI GAGTC 5 cut(s) 103, 948, 1713, 1863, 2455
PpsI GAGTC 5 cut(s) 103, 948, 1713, 1863, 2455
Ppu21I YACGTR 1 cut(s) 1427
PscI ACATGT 1 cut(s) 2067
PshAI GACNNNNGTC 1 cut(s) 1546
PshBI ATTAAT 1 cut(s) 1110
Psp6I CCWGG 4 cut(s) 26, 1126, 1141, 2206
PspGI CCWGG 4 cut(s) 26, 1126, 1141, 2206
PspN4I GGNNCC 2 cut(s) 983, 1744
PspPI GGNCC 1 cut(s) 2252
PstI CTGCAG 1 cut(s) 117
PstNI CAGNNNCTG 1 cut(s) 673
PsuI RGATCY 3 cut(s) 256, 799, 1687
RsaI GTAC 7 cut(s) 231, 1089, 1330, 1503, 1561, 1848, 2016
RsaNI GTAC 7 cut(s) 230, 1088, 1329, 1502, 1560, 1847, 2015
RseI CAYNNNNRTG 1 cut(s) 1937
SatI GCNGC 4 cut(s) 48, 58, 1020, 2137
Sau3AI GATC 9 cut(s) 151, 256, 664, 781, 799, 842, 1687, 2185, 2192
Sau96I GGNCC 1 cut(s) 2252
ScaI AGTACT 1 cut(s) 1561
SchI GAGTC 5 cut(s) 104, 948, 1714, 1864, 2455
ScrFI CCNGG 4 cut(s) 28, 1128, 1143, 2208
SduI GDGCHC 2 cut(s) 1372, 1498
SfaNI GCATC 3 cut(s) 97, 1984, 2380
SfcI CTRYAG 2 cut(s) 113, 1949
SmiMI CAYNNNNRTG 1 cut(s) 1937
SmlI CTYRAG 4 cut(s) 134, 263, 749, 1850
SmoI CTYRAG 4 cut(s) 134, 263, 749, 1850
SsiI CCGC 1 cut(s) 999
SspI AATATT 3 cut(s) 1280, 2088, 2312
SspMI CTAG 2 cut(s) 206, 1739
StyD4I CCNGG 4 cut(s) 26, 1126, 1141, 2206
StyI CCWWGG 6 cut(s) 522, 1030, 1068, 1336, 1738, 2255
TaaI ACNGT 5 cut(s) 460, 920, 961, 1087, 2236
TaiI ACGT 4 cut(s) 688, 868, 1429, 1507
TaqI TCGA 8 cut(s) 105, 279, 832, 845, 952, 2047, 2191, 2374
TaqII GACCGA 1 cut(s) 2043
TatI WGTACW 3 cut(s) 1087, 1559, 1846
TfiI GAWTC 6 cut(s) 242, 670, 1653, 1828, 2405, 2480
TscAI CASTG 2 cut(s) 49, 964
TseFI GTSAC 1 cut(s) 924
TseI GCWGC 4 cut(s) 47, 57, 1019, 2136
Tsp45I GTSAC 1 cut(s) 924
TspDTI ATGAA 6 cut(s) 371, 525, 905, 948, 1332, 2402
TspGWI ACGGA 1 cut(s) 228
TspRI CASTG 2 cut(s) 49, 964
Vha464I CTTAAG 2 cut(s) 134, 749
VneI GTGCAC 1 cut(s) 1368
VspI ATTAAT 1 cut(s) 1110
XceI RCATGY 2 cut(s) 54, 2071
XcmI CCANNNNNNNNNTGG 2 cut(s) 463, 936
XmaJI CCTAGG 1 cut(s) 1738
XmnI GAANNNNTTC 3 cut(s) 948, 1158, 2409
XspI CTAG 2 cut(s) 206, 1739
ZrmI AGTACT 1 cut(s) 1561
Zsp2I ATGCAT 1 cut(s) 1416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.