AT1G61180

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
22551271 .. 22554684
3414 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G61180.2

Sequence Viewer

Length: 2670 bp
ATGGGGAGTTGTTTTTCTCTTCAAGTTAGTGATCAAACACTGAATCGTATCTTTAATTGCTTAATTGGTAAAAGTTATATTCGAACCCTCGAGAAGAATCTCAGAGCTCTGCAGAGGGAAATGGAAGATCTCAGAGCAATTCAACATGAGGTACAAAACAAGGTAGCTAGAGACGAGGCACGCCATCAACGAAGGCTTGAAGCTGTCCAGGTATGGCTTGACCGTGTCAATAGCGTTGATATAGAGTGCAAAGATCTGCTAAGTGTTACTCCTGTTGAGCTTCAAAAGTTGTGTCTATGCGGTTTGTGTTCAAAATATGTATGTTCAAGCTACAAATATGGGAAAAAGGTATTCTTGTTACTGGAAGAGGTTAAGAAACTAAACTCGGAGGGAAATTTTGACGAGGTTTCTCAGCCGCCTCCAAGGTCTGAAGTTGAAGAGAGGCCTACTCAGCCTACGATTGGTCAGGAAGACATGCTCGAAAAGGCATGGAACCGCCTTATGGAAGATGGAGTCGGAATCATGGGTCTGCACGGTATGGGTGGTGTAGGCAAAACAACCCTTTTCAAGAAAATCCACAACAAGTTCGCTGAAATAGGTGGTACGTTTGACATTGTGATCTGGATCGTGGTGTCTAAAGGCGTAATGATTTCAAAGCTTCAAGAAGATATTGCAGAGAAACTACACCTTTGTGACGACCTGTGGAAGAACAAGAATGAAAGTGATAAGGCCACTGATATACACAGAGTTTTAAAGGGCAAGAGATTTGTTTTGATGCTAGATGATATATGGGAGAAAGTGGATTTAGAGGCCATTGGTATTCCCTATCCGAGTGAAGTAAATAAATGCAAAGTAGCATTCACGACACGTTCTCGGGAAGTTTGTGGGGAGATGGGGGATCATAAGCCGATGCAAGTCAACTGTTTGGAACCAGAGGATGCATGGGAGCTGTTCAAAAACAAGGTCGGAGACAACACATTAAGTAGTGATCCTGTTATTGTGGAGTTGGCAAGAGAGGTCGCTCAAAAATGTCGTGGTCTGCCATTGGCGCTCAACGTCATTGGTGAGACAATGTCATCTAAAACTATGGTACAAGAATGGGAGCATGCAATCCATGTTTTTAATACATCCGCTGCAGAGTTTTCTGACATGCAAAACAAAATTCTTCCGATTCTCAAGTACAGCTACGATAGCTTGGGGGATGAACATATCAAGTCGTGTTTCCTATATTGTGCTCTGTTTCCTGAAGATGGTGAGATATATAACGAAAAGTTGATAGACTACTGGATATGCGAAGGATTCATCGGAGAAGACCAAGTTATAAAAAGAGCGAGGAATAAGGGTTATGCGATGCTCGGTACCCTTACCCGTGCAAATTTGCTAACAAAGGTTGGTACATATTATTGTGTGATGCATGACGTGGTTCGTGAAATGGCTTTATGGATTGCTTCCGATTTTGGGAAACAGAAAGAGAATTTTGTTGTGCAAGCAGGAGTCGGGTTACATGAAATACCAAAAGTCAAGGATTGGGGAGCTGTAAGAAAGATGTCATTAATGGATAATGATATTGAAGAGATAACATGCGAGTCCAAGTGTTCTGAACTTACAACTTTGTTCCTTCAAAGTAATAAATTGAAGAATCTACCAGGTGCATTCATTCGGTATATGCAAAAGCTAGTTGTTTTGGATCTTTCATATAATCGTGACTTCAATAAACTTCCAGAGCAGATATCGGGGCTGGTCTCGTTGCAGTTTCTTGACTTGTCGAATACAAGTATAGAGCACATGCCTATTGGTCTCAAAGAGTTGAAAAAGCTAACTTTCCTGGATTTGACTTATACTGATCGACTTTGTAGTATCAGTGGGATATCAAGGTTGTTGAGTTTAAGATTGTTGAGACTGCTAGGGTCTAAAGTTCATGGAGATGCTAGCGTATTGAAGGAGCTGCAGCAATTGCAGAATCTACAAGAGCTAGCCATAACTGTATCCGCGGAGTTAATTAGTTTGGATCAAAGGTTGGCGAAGTTAATCTCTAATCTTTGTATTGAAGGGTTTCTTCAAAAGCCATTCGATTTATCATTCTTGGCGAGTATGGAGAATCTTAGTTCCCTACGGGTGGAAAATAGTTATTTCTCGGAGATAAAGTGCAGAGAAAGCGAGACAGAATCGTCTTATTTACGCATCAATCCGAAAATTCCATGCTTTACCAACCTCTCACGACTGGAGATAATGAAGTGCCATAGCATGAAGGATCTGACTTGGATATTGTTTGCTCCAAATCTTGTCGTGCTACTCATTGAAGATTCAAGAGAAGTGGGAGAAATAATAAACAAAGAGAAAGCAACCAATCTTACAAGTATTACACCATTTCTGAAACTAGAATGGTTGATTTTGTATAATTTGCCGAAGCTGGAGAGTATCTACTGGAGTCCTCTCCCCTTTCCGGTTTTGTTGACCATGGATGTTTCAAACTGTCCAAAGCTGAGAAAGCTTCCATTAAATGCTACAAGTGTTTCAAAAGTTGAAGAATTTGAAATACATATGTATCCTCCTCCAGAACAGGAAAATGAGCTTGAATGGGAGGACGATGATACCAAAAATCGATTCTTGCCTTCAATCAAACCGTACAAGTACTTCGTCTACCCAGGAATGAGTTTCCTCACTGTCTAA

Protein Analysis

889

Amino Acids

101.67

Weight (kDa)

5.68

Isoelectric Point (pI)

42.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 156 - 327 4.1e-68 NB-ARC domain
WHD_DRP PF23559 413 - 479 5.1e-10 Disease resistance protein Winged helix domain
LRR_14 PF23598 513 - 774 5.9e-14 Leucine-rich repeat region
LRR_8 PF13855 534 - 593 4.1e-10 Leucine rich repeat
LRR_RPS2 PF23247 728 - 831 2.1e-06 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000363)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G12210 AT1G12210 AT1G12210 AT1G12220 AT1G12220 AT1G12220 AT1G12280 AT1G12280 AT1G12290 AT1G12290 AT1G12290 AT1G12290 AT1G15890 AT1G15890 AT1G51480 AT1G52660 AT1G52660 AT1G61180 AT1G61180 AT1G61190 AT1G61190 AT1G61190 AT1G61190 AT1G61300 AT1G61300 AT1G61310 AT3G15700 AT3G15700 AT4G10780 AT4G10780 AT5G43730 AT5G43730 AT5G43730 AT5G43730 AT5G43730 AT5G43740 AT5G43740 AT5G63020
fragaria_vesca FvH4_6g30050 FvH4_6g48220
malus_domestica MD09G1055800.v1.1 MD09G1198800.v1.1 MD17G1204800.v1.1 MD17G1204900.v1.1 MD17G1205000.v1.1 MD17G1205300.v1.1 MD17G1205700.v1.1 MD17G1205800.v1.1 MD17G1224100.v1.1
prunus_persica Prupe.3G054800_v2.0.a1 Prupe.3G054800_v2.0.a1 Prupe.3G080300_v2.0.a1 Prupe.3G080400_v2.0.a1 Prupe.3G080500_v2.0.a1 Prupe.3G080600_v2.0.a1 Prupe.3G080800_v2.0.a1 Prupe.3G083200_v2.0.a1 Prupe.3G099800_v2.0.a1 Prupe.3G099800_v2.0.a1
pyrus_communis pycom17g20860 pycom17g20910 pycom17g22790
rosa_chinensis RchiOBHm_Chr2g0136891 RchiOBHm_Chr2g0136901 RchiOBHm_Chr2g0167711 RchiOBHm_Chr2g0167721 RchiOBHm_Chr2g0167731 RchiOBHm_Chr4g0407611
rosa_laevigata RLG00000018943 RLG00000019278 RLG00000019282 RLG00000019587 RLG00000021748 RLG00000021749 RLG00000031057
rosa_multiflora Rmu_sc0002143.1_g000003 Rmu_sc0002782.1_g000001 Rmu_sc0023879.1_g000001 Rmu_sc0042171.1_g000001
rosa_roxburghii Rroxscaffold_2G00083300 Rroxscaffold_2G00107890 Rroxscaffold_2G00116680
rosa_rugosa Rorug02G0271700 Rorug02G0334900 Rorug02G0531800 Rorug02G0531800
rosa_samantha Rh2AG359900 Rh2AG385100 Rh2AG600500 Rh2AG600600 Rh2BG392200 Rh2BG611000 Rh2BG611100 Rh2BG611200 Rh2CG343100 Rh2CG343300 Rh2CG372300 Rh2CG581400 Rh2CG581500 Rh2DG382900 Rh2DG623700 Rh5AG027500 Rh5CG029900
rosa_wichuraiana Rw2G031490 Rw2G049850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1322
AasI GACNNNNNNGTC 1 cut(s) 2167
Acc65I GGTACC 1 cut(s) 1358
AccB1I GGYRCC 1 cut(s) 1358
AccI GTMKAC 1 cut(s) 2640
AccII CGCG 1 cut(s) 1991
AciI CCGC 6 cut(s) 300, 416, 496, 1131, 1989, 1991
AclWI GGATC 6 cut(s) 632, 906, 983, 1695, 2016, 2259
AcsI RAATTY 6 cut(s) 394, 1161, 1375, 1474, 2193, 2528
AcuI CTGAAG 2 cut(s) 450, 1266
AfaI GTAC 8 cut(s) 153, 604, 1092, 1181, 1360, 1396, 2627, 2633
AfiI CCNNNNNNNGG 6 cut(s) 461, 502, 1250, 1458, 2116, 2443
AflIII ACRYGT 1 cut(s) 866
AjiI CACGTC 1 cut(s) 1420
AjnI CCWGG 4 cut(s) 207, 1645, 1824, 2644
AjuI GAANNNNNNNTTGG 2 cut(s) 2588, 2620
AleI CACNNNNGTG 1 cut(s) 690
Alw21I GWGCWC 3 cut(s) 109, 1237, 1785
Alw26I GTCTC 7 cut(s) 165, 963, 1061, 1747, 1802, 1891, 2153
AlwI GGATC 6 cut(s) 632, 906, 983, 1695, 2016, 2259
Ama87I CYCGRG 2 cut(s) 89, 873
AoxI GGCC 3 cut(s) 443, 729, 810
ApeKI GCWGC 3 cut(s) 1133, 1945, 1948
ApoI RAATTY 6 cut(s) 394, 1161, 1375, 1474, 2193, 2528
ArsI GACNNNNNNTTYG 4 cut(s) 277, 309, 948, 980
AseI ATTAAT 1 cut(s) 1553
Asp700I GAANNNNTTC 1 cut(s) 2052
Asp718I GGTACC 1 cut(s) 1358
AspLEI GCGC 1 cut(s) 1051
AsuHPI GGTGA 2 cut(s) 1076, 1265
AsuII TTCGAA 1 cut(s) 82
AsuNHI GCTAGC 2 cut(s) 1928, 1972
AvaI CYCGRG 2 cut(s) 89, 873
BaeI ACNNNNGTAYC 2 cut(s) 2528, 2561
BanI GGYRCC 1 cut(s) 1358
BanII GRGCYC 1 cut(s) 109
BarI GAAGNNNNNNTAC 2 cut(s) 2618, 2650
BbsI GAAGAC 2 cut(s) 477, 1317
Bbv12I GWGCWC 3 cut(s) 109, 1237, 1785
BbvI GCAGC 3 cut(s) 1120, 1932, 1960
BccI CCATC 4 cut(s) 192, 503, 886, 1244
BciT130I CCWGG 4 cut(s) 209, 1647, 1826, 2646
BciVI GTATCC 2 cut(s) 1996, 2556
BclI TGATCA 1 cut(s) 31
BcoDI GTCTC 7 cut(s) 165, 963, 1061, 1747, 1802, 1891, 2153
BfaI CTAG 7 cut(s) 168, 779, 1676, 1904, 1929, 1973, 2378
BfmI CTRYAG 3 cut(s) 110, 1134, 1946
BfoI RGCGCY 1 cut(s) 1052
BfuI GTATCC 2 cut(s) 1996, 2556
BglII AGATCT 2 cut(s) 127, 253
BisI GCNGC 4 cut(s) 416, 1134, 1946, 1949
BlsI GCNGC 4 cut(s) 417, 1135, 1947, 1950
BmcAI AGTACT 1 cut(s) 2633
Bme1390I CCNGG 4 cut(s) 209, 1647, 1826, 2646
BmeT110I CYCGRG 2 cut(s) 89, 873
BmgBI CACGTC 1 cut(s) 1420
BmiI GGNNCC 3 cut(s) 494, 930, 1360
BmrFI CCNGG 4 cut(s) 209, 1647, 1826, 2646
BmsI GCATC 7 cut(s) 765, 900, 928, 1341, 1401, 1915, 2190
BmtI GCTAGC 2 cut(s) 1932, 1976
BpiI GAAGAC 2 cut(s) 477, 1317
BplI GAGNNNNNCTC 2 cut(s) 433, 465
BpmI CTGGAG 4 cut(s) 2243, 2432, 2446, 2538
Bpu14I TTCGAA 1 cut(s) 82
BpuEI CTTGAG 1 cut(s) 1160
Bsa29I ATCGAT 1 cut(s) 2602
BsaBI GATNNNNATC 1 cut(s) 623
BsaI GGTCTC 2 cut(s) 1747, 1802
BsaJI CCNNGG 4 cut(s) 422, 1989, 2457, 2644
BsaWI WCCGGW 1 cut(s) 2443
BsaXI ACNNNNNCTCC 2 cut(s) 2129, 2159
Bsc4I CCNNNNNNNGG 6 cut(s) 461, 502, 1250, 1458, 2116, 2443
Bse1I ACTGG 4 cut(s) 366, 1289, 2226, 2429
Bse8I GATNNNNATC 1 cut(s) 623
BseBI CCWGG 4 cut(s) 209, 1647, 1826, 2646
BseCI ATCGAT 1 cut(s) 2602
BseDI CCNNGG 4 cut(s) 422, 1989, 2457, 2644
BseGI GGATG 4 cut(s) 943, 1127, 1207, 2467
BseJI GATNNNNATC 1 cut(s) 623
BseLI CCNNNNNNNGG 6 cut(s) 461, 502, 1250, 1458, 2116, 2443
BseMII CTCAG 5 cut(s) 115, 145, 425, 464, 2474
BseNI ACTGG 4 cut(s) 366, 1289, 2226, 2429
BseRI GAGGAG 1 cut(s) 2541
BseXI GCAGC 3 cut(s) 1120, 1932, 1960
BsgI GTGCAG 2 cut(s) 515, 2167
Bsh1236I CGCG 1 cut(s) 1991
BshFI GGCC 3 cut(s) 445, 731, 812
BshNI GGYRCC 1 cut(s) 1358
BshVI ATCGAT 1 cut(s) 2602
BsiHKAI GWGCWC 3 cut(s) 109, 1237, 1785
BsiHKCI CYCGRG 2 cut(s) 89, 873
BsiSI CCGG 1 cut(s) 2444
BslI CCNNNNNNNGG 6 cut(s) 461, 502, 1250, 1458, 2116, 2443
BsmAI GTCTC 7 cut(s) 165, 963, 1061, 1747, 1802, 1891, 2153
BsmBI CGTCTC 1 cut(s) 165
BsmI GAATGC 2 cut(s) 857, 1652
BsnI GGCC 3 cut(s) 445, 731, 812
Bso31I GGTCTC 2 cut(s) 1747, 1802
BsoBI CYCGRG 2 cut(s) 89, 873
Bsp119I TTCGAA 1 cut(s) 82
Bsp1286I GDGCHC 3 cut(s) 109, 1237, 1785
Bsp19I CCATGG 1 cut(s) 2457
BspACI CCGC 6 cut(s) 300, 416, 496, 1131, 1989, 1991
BspANI GGCC 3 cut(s) 445, 731, 812
BspCNI CTCAG 5 cut(s) 114, 144, 424, 463, 2475
BspDI ATCGAT 1 cut(s) 2602
BspFNI CGCG 1 cut(s) 1991
BspLI GGNNCC 3 cut(s) 494, 930, 1360
BspMAI CTGCAG 3 cut(s) 114, 1138, 1950
BspOI GCTAGC 2 cut(s) 1932, 1976
BspPI GGATC 6 cut(s) 632, 906, 983, 1695, 2016, 2259
BspT104I TTCGAA 1 cut(s) 82
BspT107I GGYRCC 1 cut(s) 1358
BspTNI GGTCTC 2 cut(s) 1747, 1802
BsrI ACTGG 4 cut(s) 366, 1289, 2226, 2429
BssECI CCNNGG 4 cut(s) 422, 1989, 2457, 2644
BssT1I CCWWGG 2 cut(s) 422, 2457
Bst2UI CCWGG 4 cut(s) 209, 1647, 1826, 2646
Bst4CI ACNGT 7 cut(s) 224, 536, 923, 1984, 2474, 2625, 2665
Bst6I CTCTTC 4 cut(s) 24, 360, 432, 1566
BstAPI GCANNNNNTGC 1 cut(s) 1954
BstBI TTCGAA 1 cut(s) 82
BstC8I GCNNGC 5 cut(s) 181, 1107, 1488, 1930, 1974
BstDEI CTNAG 7 cut(s) 101, 131, 260, 411, 450, 2102, 2483
BstDSI CCRYGG 2 cut(s) 1989, 2457
BstF5I GGATG 4 cut(s) 943, 1127, 1207, 2467
BstFNI CGCG 1 cut(s) 1991
BstH2I RGCGCY 1 cut(s) 1052
BstHHI GCGC 1 cut(s) 1051
BstMAI GTCTC 7 cut(s) 165, 963, 1061, 1747, 1802, 1891, 2153
BstMWI GCNNNNNNNGC 6 cut(s) 451, 1048, 1191, 1954, 2154, 2488
BstNI CCWGG 4 cut(s) 209, 1647, 1826, 2646
BstNSI RCATGY 5 cut(s) 478, 1109, 1153, 1584, 1789
BstSCI CCNGG 4 cut(s) 207, 1645, 1824, 2644
BstSFI CTRYAG 3 cut(s) 110, 1134, 1946
BstUI CGCG 1 cut(s) 1991
BstV1I GCAGC 3 cut(s) 1120, 1932, 1960
BstV2I GAAGAC 2 cut(s) 477, 1317
BstX2I RGATCY 4 cut(s) 127, 253, 1687, 2251
BstYI RGATCY 4 cut(s) 127, 253, 1687, 2251
Bsu15I ATCGAT 1 cut(s) 2602
BsuI GTATCC 2 cut(s) 1996, 2556
BsuRI GGCC 3 cut(s) 445, 731, 812
BsuTUI ATCGAT 1 cut(s) 2602
BtgI CCRYGG 2 cut(s) 1989, 2457
BtgZI GCGATG 1 cut(s) 1364
BtrI CACGTC 1 cut(s) 1420
BtsCI GGATG 4 cut(s) 943, 1127, 1207, 2467
BtsIMutI CAGTG 4 cut(s) 38, 732, 1867, 2661
Cac8I GCNNGC 5 cut(s) 181, 1107, 1488, 1930, 1974
CfoI GCGC 1 cut(s) 1051
Cfr42I CCGCGG 1 cut(s) 1992
ClaI ATCGAT 1 cut(s) 2602
CsiI ACCWGGT 1 cut(s) 1645
Csp6I GTAC 8 cut(s) 152, 603, 1091, 1180, 1359, 1395, 2626, 2632
CspCI CAANNNNNGTGG 2 cut(s) 2295, 2330
CviQI GTAC 8 cut(s) 152, 603, 1091, 1180, 1359, 1395, 2626, 2632
DdeI CTNAG 7 cut(s) 101, 131, 260, 411, 450, 2102, 2483
DraI TTTAAA 1 cut(s) 753
DrdI GACNNNNNNGTC 1 cut(s) 2167
DseDI GACNNNNNNGTC 1 cut(s) 2167
Eam1104I CTCTTC 4 cut(s) 24, 360, 432, 1566
EarI CTCTTC 4 cut(s) 24, 360, 432, 1566
Ecl136II GAGCTC 1 cut(s) 107
Eco130I CCWWGG 2 cut(s) 422, 2457
Eco147I AGGCCT 1 cut(s) 445
Eco24I GRGCYC 1 cut(s) 109
Eco31I GGTCTC 2 cut(s) 1747, 1802
Eco32I GATATC 2 cut(s) 1731, 1869
Eco53kI GAGCTC 1 cut(s) 107
Eco57I CTGAAG 2 cut(s) 450, 1266
Eco88I CYCGRG 2 cut(s) 89, 873
EcoICRI GAGCTC 1 cut(s) 107
EcoRII CCWGG 4 cut(s) 207, 1645, 1824, 2644
EcoRV GATATC 2 cut(s) 1731, 1869
EcoT14I CCWWGG 2 cut(s) 422, 2457
EcoT22I ATGCAT 2 cut(s) 943, 1416
EcoT38I GRGCYC 1 cut(s) 109
ErhI CCWWGG 2 cut(s) 422, 2457
Esp3I CGTCTC 1 cut(s) 165
FalI AAGNNNNNCTT 4 cut(s) 338, 370, 2040, 2072
FauNDI CATATG 1 cut(s) 2541
FbaI TGATCA 1 cut(s) 31
FblI GTMKAC 1 cut(s) 2640
Fnu4HI GCNGC 4 cut(s) 416, 1134, 1946, 1949
FokI GGATG 4 cut(s) 950, 1114, 1214, 2474
FriOI GRGCYC 1 cut(s) 109
Fsp4HI GCNGC 4 cut(s) 416, 1134, 1946, 1949
FspBI CTAG 7 cut(s) 168, 779, 1676, 1904, 1929, 1973, 2378
GlaI GCGC 1 cut(s) 1050
GluI GCNGC 4 cut(s) 416, 1134, 1946, 1949
GsuI CTGGAG 4 cut(s) 2243, 2432, 2446, 2538
HaeII RGCGCY 1 cut(s) 1052
HaeIII GGCC 3 cut(s) 445, 731, 812
HapII CCGG 1 cut(s) 2444
HhaI GCGC 1 cut(s) 1051
Hin6I GCGC 1 cut(s) 1049
HinP1I GCGC 1 cut(s) 1049
HincII GTYRAC 2 cut(s) 919, 2454
HindII GTYRAC 2 cut(s) 919, 2454
HindIII AAGCTT 2 cut(s) 656, 2489
HpaII CCGG 1 cut(s) 2444
HphI GGTGA 2 cut(s) 1076, 1265
Hpy166II GTNNAC 3 cut(s) 919, 2454, 2641
Hpy8I GTNNAC 3 cut(s) 919, 2454, 2641
HpyAV CCTTC 7 cut(s) 186, 1289, 1628, 1933, 2042, 2242, 2622
HpyCH4III ACNGT 7 cut(s) 224, 536, 923, 1984, 2474, 2625, 2665
HpyCH4IV ACGT 4 cut(s) 605, 868, 1056, 1419
HpyF10VI GCNNNNNNNGC 6 cut(s) 451, 1048, 1191, 1954, 2154, 2488
HpyF3I CTNAG 7 cut(s) 101, 131, 260, 411, 450, 2102, 2483
HpySE526I ACGT 4 cut(s) 605, 868, 1056, 1419
HspAI GCGC 1 cut(s) 1049
KpnI GGTACC 1 cut(s) 1362
Ksp22I TGATCA 1 cut(s) 31
KspI CCGCGG 1 cut(s) 1992
LmnI GCTCC 5 cut(s) 946, 1102, 1532, 1942, 2278
Lsp1109I GCAGC 3 cut(s) 1120, 1932, 1960
LweI GCATC 7 cut(s) 765, 900, 928, 1341, 1401, 1915, 2190
MabI ACCWGGT 1 cut(s) 1645
MaeI CTAG 7 cut(s) 168, 779, 1676, 1904, 1929, 1973, 2378
MaeII ACGT 4 cut(s) 605, 868, 1056, 1419
MaeIII GTNAC 5 cut(s) 265, 357, 692, 1500, 1703
MfeI CAATTG 1 cut(s) 1952
MflI RGATCY 4 cut(s) 127, 253, 1687, 2251
MhlI GDGCHC 3 cut(s) 109, 1237, 1785
MlyI GAGTC 4 cut(s) 522, 1503, 1595, 2437
MmeI TCCRAC 2 cut(s) 496, 946
Mph1103I ATGCAT 2 cut(s) 943, 1416
MroXI GAANNNNTTC 1 cut(s) 2052
MslI CAYNNNNRTG 2 cut(s) 690, 1923
MspA1I CMGCKG 2 cut(s) 1133, 1991
MspI CCGG 1 cut(s) 2444
MspR9I CCNGG 4 cut(s) 209, 1647, 1826, 2646
MunI CAATTG 1 cut(s) 1952
Mva1269I GAATGC 2 cut(s) 857, 1652
MvaI CCWGG 4 cut(s) 209, 1647, 1826, 2646
MvnI CGCG 1 cut(s) 1991
MwoI GCNNNNNNNGC 6 cut(s) 451, 1048, 1191, 1954, 2154, 2488
NcoI CCATGG 1 cut(s) 2457
NdeI CATATG 1 cut(s) 2541
NheI GCTAGC 2 cut(s) 1928, 1972
NlaIV GGNNCC 3 cut(s) 494, 930, 1360
NmuCI GTSAC 2 cut(s) 692, 1703
NsiI ATGCAT 2 cut(s) 943, 1416
NspI RCATGY 5 cut(s) 478, 1109, 1153, 1584, 1789
NspV TTCGAA 1 cut(s) 82
OliI CACNNNNGTG 1 cut(s) 690
PaeI GCATGC 1 cut(s) 1109
PaeR7I CTCGAG 1 cut(s) 89
PceI AGGCCT 1 cut(s) 445
PcsI WCGNNNNNNNCGW 1 cut(s) 187
PctI GAATGC 2 cut(s) 857, 1652
PdmI GAANNNNTTC 1 cut(s) 2052
PflFI GACNNNGTC 2 cut(s) 224, 1072
PfoI TCCNGGA 1 cut(s) 1824
PkrI GCNGC 4 cut(s) 417, 1135, 1947, 1950
PleI GAGTC 4 cut(s) 521, 1502, 1594, 2436
PpsI GAGTC 4 cut(s) 521, 1502, 1594, 2436
PshBI ATTAAT 1 cut(s) 1553
PsiI TTATAA 1 cut(s) 1322
Psp124BI GAGCTC 1 cut(s) 109
Psp6I CCWGG 4 cut(s) 207, 1645, 1824, 2644
PspGI CCWGG 4 cut(s) 207, 1645, 1824, 2644
PspN4I GGNNCC 3 cut(s) 494, 930, 1360
PstI CTGCAG 3 cut(s) 114, 1138, 1950
PsuI RGATCY 4 cut(s) 127, 253, 1687, 2251
PsyI GACNNNGTC 2 cut(s) 224, 1072
RsaI GTAC 8 cut(s) 153, 604, 1092, 1181, 1360, 1396, 2627, 2633
RsaNI GTAC 8 cut(s) 152, 603, 1091, 1180, 1359, 1395, 2626, 2632
RseI CAYNNNNRTG 2 cut(s) 690, 1923
SacI GAGCTC 1 cut(s) 109
SacII CCGCGG 1 cut(s) 1992
SatI GCNGC 4 cut(s) 416, 1134, 1946, 1949
ScaI AGTACT 1 cut(s) 2633
SchI GAGTC 4 cut(s) 522, 1503, 1595, 2437
ScrFI CCNGG 4 cut(s) 209, 1647, 1826, 2646
SduI GDGCHC 3 cut(s) 109, 1237, 1785
SexAI ACCWGGT 1 cut(s) 1645
SfaNI GCATC 7 cut(s) 765, 900, 928, 1341, 1401, 1915, 2190
SfcI CTRYAG 3 cut(s) 110, 1134, 1946
Sfr274I CTCGAG 1 cut(s) 89
Sfr303I CCGCGG 1 cut(s) 1992
SfuI TTCGAA 1 cut(s) 82
SgrBI CCGCGG 1 cut(s) 1992
SlaI CTCGAG 1 cut(s) 89
SmiMI CAYNNNNRTG 2 cut(s) 690, 1923
SmlI CTYRAG 2 cut(s) 89, 1175
SmoI CTYRAG 2 cut(s) 89, 1175
SphI GCATGC 1 cut(s) 1109
SseBI AGGCCT 1 cut(s) 445
SsiI CCGC 6 cut(s) 300, 416, 496, 1131, 1989, 1991
SspMI CTAG 7 cut(s) 168, 779, 1676, 1904, 1929, 1973, 2378
SstI GAGCTC 1 cut(s) 109
StuI AGGCCT 1 cut(s) 445
StyD4I CCNGG 4 cut(s) 207, 1645, 1824, 2644
StyI CCWWGG 2 cut(s) 422, 2457
TaaI ACNGT 7 cut(s) 224, 536, 923, 1984, 2474, 2625, 2665
TaiI ACGT 4 cut(s) 608, 871, 1059, 1422
TaqI TCGA 7 cut(s) 82, 90, 480, 1766, 1846, 2070, 2602
TatI WGTACW 2 cut(s) 1179, 2631
TauI GCSGC 1 cut(s) 418
TscAI CASTG 4 cut(s) 45, 739, 1867, 2668
TseFI GTSAC 2 cut(s) 692, 1703
TseI GCWGC 3 cut(s) 1133, 1945, 1948
Tsp45I GTSAC 2 cut(s) 692, 1703
TspDTI ATGAA 9 cut(s) 732, 1218, 1291, 1521, 1645, 1683, 1907, 2246, 2261
TspRI CASTG 4 cut(s) 45, 739, 1867, 2668
Tth111I GACNNNGTC 2 cut(s) 224, 1072
VspI ATTAAT 1 cut(s) 1553
XapI RAATTY 6 cut(s) 394, 1161, 1375, 1474, 2193, 2528
XceI RCATGY 5 cut(s) 478, 1109, 1153, 1584, 1789
XcmI CCANNNNNNNNNTGG 1 cut(s) 939
XhoI CTCGAG 1 cut(s) 89
XmiI GTMKAC 1 cut(s) 2640
XmnI GAANNNNTTC 1 cut(s) 2052
XspI CTAG 7 cut(s) 168, 779, 1676, 1904, 1929, 1973, 2378
ZrmI AGTACT 1 cut(s) 2633
Zsp2I ATGCAT 2 cut(s) 943, 1416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.