AT1G15890

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
5461309 .. 5464241
2933 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G15890.2

Sequence Viewer

Length: 2556 bp
ATGGGAAACTGTGTAGCACTAGAAATATCTTGTGATCAAACGTTGAATCATGCTTGTGGCTGCTTATTTGGTGATCGGAATTACATTCTCAAGATGGAGGCTAATCTCGAGGCTCTGCAGAATACTATGCAAGAGCTCGAGGAGAGAAGAGATGATCTGTTAAGAAGAGTTGTCATAGAAGAAGACAAAGGTTTGCAACGGCTTGCTCAAGTTCAAGGTTGGCTTTCAAGGGTTAAAGATGTTTGTTCTCAAGTCAATGATCTGCTGAAAGCTAAATCAATTCAAACTGAAAGGTTATGTCTCTGTGGATATTGTTCTAAGAATTTCATATCTGGCCGCAATTACGGAATAAATGTACTGAAAAAGTTGAAACACGTGGAAGGACTTCTAGCTAAAGGAGTTTTTGAAGTGGTGGCAGAGAAAATTCCTGCGCCTAAGGTGGAGAAGAAGCATATCCAAACCACAGTTGGGTTGGATGCAATGGTCGGAAGGGCATGGAACAGCCTCATGAAAGATGAACGAAGAACTTTGGGTCTTTATGGTATGGGGGGAGTAGGTAAAACCACGCTCTTAGCTTCTATTAACAACAAATTCCTTGAAGGGATGAATGGATTTGATCTTGTTATATGGGTTGTGGTTTCTAAAGATTTGCAAAATGAAGGCATTCAAGAACAGATTTTAGGAAGACTAGGTCTTCACAGGGGATGGAAACAAGTTACAGAAAAGGAGAAAGCCTCTTACATATGCAACATCCTCAACGTAAAGAAATTTGTGCTGTTATTGGATGATCTATGGAGCGAAGTAGATTTAGAAAAGATTGGAGTTCCACCTCTAACGCGAGAAAATGGATCCAAAATAGTTTTCACCACTCGTTCTAAAGATGTTTGCAGAGATATGGAAGTTGATGGTGAGATGAAAGTTGATTGTTTGCCACCGGATGAAGCCTGGGAACTGTTCCAAAAGAAAGTTGGACCAATCCCATTACAGAGCCATGAGGATATTCCCACACTTGCAAGAAAAGTAGCAGAAAAATGTTGTGGCTTGCCACTTGCACTCAGTGTCATTGGCAAAGCTATGGCATCTAGAGAGACTGTTCAGGAATGGCAGCATGTGATTCATGTTCTGAACTCGTCTAGCCACGAGTTCCCAAGTATGGAAGAAAAAATTCTTCCTGTTTTGAAGTTCAGTTATGATGATTTAAAAGATGAAAAAGTCAAATTGTGCTTCCTTTATTGTTCCCTGTTTCCGGAAGATTATGAAGTAAGAAAGGAAGAGTTGATAGAATATTGGATGTGTGAAGGATTTATAGATGGGAATGAAGATGAAGATGGAGCTAACAACAAAGGTCATGACATAATTGGCTCGTTAGTTCGTGCACATCTATTGATGGATGGTGAACTAACAACAAAAGTGAAAATGCATGATGTCATACGCGAGATGGCTCTTTGGATAGCGTCGAACTTTGGAAAACAGAAAGAAACACTTTGTGTGAAACCCGGTGTGCAGTTATGCCATATACCAAAGGACATCAATTGGGAAAGTTTGAGAAGGATGTCTTTGATGTGCAATCAGATTGCAAATATATCTTCTAGTTCCAACTCTCCCAACCTCTCAACTCTATTACTCCAGAATAACAAGTTGGTGCATATATCATGTGACTTTTTTAGGTTTATGCCAGCACTCGTGGTCTTGGATCTTTCGAGGAACTCGAGTCTCTCTAGCTTGCCGGAAGCAATTTCTAAGTTAGGTTCCTTGCAATATATCAACTTATCAACAACAGGGATAAAATGGTTGCCAGTTAGTTTTAAGGAGTTGAAGAAATTAATCCATTTGAATCTGGAGTTTACTGATGAACTTGAAAGTATTGTTGGGATAGCTACAAGCCTACCAAACCTGCAAGTGTTGAAATTGTTTTCTTCTCGTGTTTGTATTGATGGCAGTTTAATGGAAGAGTTACTACTCTTGGAGCACTTGAAGGTTTTAACAGCAACTATAAAGGACGCCTTGATTTTGGAAAGTATACAAGGAGTGGACCGATTGGTGAGTAGTATTCAAGCTTTATGTCTCAGAAATATGTCAGCACCGGTTATAATATTGAACACGGTAGCTCTGGGTGGTCTTCAACACCTTGAAATCGTGGGCTCCAAAATCTCAGAGATAAAGATAGATTGGGAAAGAAAAGGAAGAGGGGAGCTTAAATGTACAAGTTCTCCTGGCTTTAAGCACCTCTCTGTTGTTGAAATATTCAATTTGGAAGGTCCAAGGGATTTAACATGGCTGTTGTTTGCTCAAAACCTCAGGCGTCTATCTGTGACGCTGTCATTAACCATAGAAGAGATAATAAACAAGGAGAAAGGAATGAGTATTACCAATGTGCATCCAAATATCGTTGTTCCGTTTGGGAAGCTGGAATTCCTTGAAGTAAGGGGTTTGGATGAGTTAAAGAGAATCTGCTGGAATCCCCCGGCTCTTCCAAACCTGAGACAATTTGATGTACGAAGCTGCCTTAAGCTACCGGAAGCTGCCACTGAGTTTCCGCGACATGCCAATGAATAA

Protein Analysis

851

Amino Acids

95.84

Weight (kDa)

6.24

Isoelectric Point (pI)

45.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 1 - 165 8.1e-50 NB-ARC domain
WHD_DRP PF23559 254 - 321 2.9e-13 Disease resistance protein Winged helix domain
LRR_14 PF23598 355 - 673 2.2e-11 Leucine-rich repeat region
LRR_8 PF13855 375 - 433 8.8e-12 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000363)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G12210 AT1G12210 AT1G12210 AT1G12220 AT1G12220 AT1G12220 AT1G12280 AT1G12280 AT1G12290 AT1G12290 AT1G12290 AT1G12290 AT1G15890 AT1G15890 AT1G51480 AT1G52660 AT1G52660 AT1G61180 AT1G61180 AT1G61190 AT1G61190 AT1G61190 AT1G61190 AT1G61300 AT1G61300 AT1G61310 AT3G15700 AT3G15700 AT4G10780 AT4G10780 AT5G43730 AT5G43730 AT5G43730 AT5G43730 AT5G43730 AT5G43740 AT5G43740 AT5G63020
fragaria_vesca FvH4_6g30050 FvH4_6g48220
malus_domestica MD09G1055800.v1.1 MD09G1198800.v1.1 MD17G1204800.v1.1 MD17G1204900.v1.1 MD17G1205000.v1.1 MD17G1205300.v1.1 MD17G1205700.v1.1 MD17G1205800.v1.1 MD17G1224100.v1.1
prunus_persica Prupe.3G054800_v2.0.a1 Prupe.3G054800_v2.0.a1 Prupe.3G080300_v2.0.a1 Prupe.3G080400_v2.0.a1 Prupe.3G080500_v2.0.a1 Prupe.3G080600_v2.0.a1 Prupe.3G080800_v2.0.a1 Prupe.3G083200_v2.0.a1 Prupe.3G099800_v2.0.a1 Prupe.3G099800_v2.0.a1
pyrus_communis pycom17g20860 pycom17g20910 pycom17g22790
rosa_chinensis RchiOBHm_Chr2g0136891 RchiOBHm_Chr2g0136901 RchiOBHm_Chr2g0167711 RchiOBHm_Chr2g0167721 RchiOBHm_Chr2g0167731 RchiOBHm_Chr4g0407611
rosa_laevigata RLG00000018943 RLG00000019278 RLG00000019282 RLG00000019587 RLG00000021748 RLG00000021749 RLG00000031057
rosa_multiflora Rmu_sc0002143.1_g000003 Rmu_sc0002782.1_g000001 Rmu_sc0023879.1_g000001 Rmu_sc0042171.1_g000001
rosa_roxburghii Rroxscaffold_2G00083300 Rroxscaffold_2G00107890 Rroxscaffold_2G00116680
rosa_rugosa Rorug02G0271700 Rorug02G0334900 Rorug02G0531800 Rorug02G0531800
rosa_samantha Rh2AG359900 Rh2AG385100 Rh2AG600500 Rh2AG600600 Rh2BG392200 Rh2BG611000 Rh2BG611100 Rh2BG611200 Rh2CG343100 Rh2CG343300 Rh2CG372300 Rh2CG581400 Rh2CG581500 Rh2DG382900 Rh2DG623700 Rh5AG027500 Rh5CG029900
rosa_wichuraiana Rw2G031490 Rw2G049850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2090
Acc36I ACCTGC 1 cut(s) 1902
AccI GTMKAC 1 cut(s) 2020
AccII CGCG 3 cut(s) 838, 1434, 2539
AccIII TCCGGA 1 cut(s) 1246
AciI CCGC 2 cut(s) 337, 2537
AclI AACGTT 1 cut(s) 41
AclWI GGATC 3 cut(s) 843, 856, 1701
AcoI YGGCCR 1 cut(s) 334
AcsI RAATTY 6 cut(s) 322, 423, 590, 767, 1164, 2411
AcvI CACGTG 1 cut(s) 376
AcyI GRCGYC 2 cut(s) 2001, 2302
AdeI CACNNNGTG 2 cut(s) 1058, 1487
AfaI GTAC 3 cut(s) 357, 2203, 2496
AfiI CCNNNNNNNGG 3 cut(s) 468, 1153, 1246
AflII CTTAAG 1 cut(s) 2507
AflIII ACRYGT 1 cut(s) 373
AgeI ACCGGT 1 cut(s) 2083
AjnI CCWGG 2 cut(s) 944, 2212
AjuI GAANNNNNNNTTGG 6 cut(s) 845, 877, 1622, 1654, 1851, 1883
Alw21I GWGCWC 3 cut(s) 138, 1378, 1971
Alw26I GTCTC 5 cut(s) 305, 1082, 1718, 2069, 2476
Alw44I GTGCAC 1 cut(s) 1374
AlwI GGATC 3 cut(s) 843, 856, 1701
Ama87I CYCGRG 3 cut(s) 107, 137, 1708
Aor13HI TCCGGA 1 cut(s) 1246
AoxI GGCC 1 cut(s) 334
ApaLI GTGCAC 1 cut(s) 1374
ApeKI GCWGC 4 cut(s) 60, 1105, 2502, 2522
ApoI RAATTY 6 cut(s) 322, 423, 590, 767, 1164, 2411
AseI ATTAAT 1 cut(s) 1823
AsiGI ACCGGT 1 cut(s) 2083
Asp700I GAANNNNTTC 3 cut(s) 384, 663, 1164
AspLEI GCGC 1 cut(s) 433
AspS9I GGNCC 3 cut(s) 971, 2032, 2258
AsuC2I CCSGG 2 cut(s) 1497, 2465
AsuHPI GGTGA 5 cut(s) 83, 856, 920, 1406, 2053
AvaI CYCGRG 3 cut(s) 107, 137, 1708
AvaII GGWCC 3 cut(s) 971, 2032, 2258
AxyI CCTNAGG 2 cut(s) 435, 2297
BaeGI GKGCMC 1 cut(s) 1378
BamHI GGATCC 1 cut(s) 848
BanII GRGCYC 2 cut(s) 138, 2144
BarI GAAGNNNNNNTAC 2 cut(s) 1941, 1973
BauI CACGAG 3 cut(s) 1139, 1682, 1920
BbrPI CACGTG 1 cut(s) 376
BbsI GAAGAC 4 cut(s) 189, 686, 691, 2111
Bbv12I GWGCWC 3 cut(s) 138, 1378, 1971
BbvI GCAGC 4 cut(s) 47, 1117, 2489, 2509
BccI CCATC 9 cut(s) 88, 699, 899, 1304, 1322, 1381, 1385, 1432, 1928
BceAI ACGGC 1 cut(s) 215
BciT130I CCWGG 2 cut(s) 946, 2214
BclI TGATCA 1 cut(s) 34
BcnI CCSGG 2 cut(s) 1497, 2465
BcoDI GTCTC 5 cut(s) 305, 1082, 1718, 2069, 2476
BfaI CTAG 7 cut(s) 20, 389, 689, 1083, 1134, 1590, 1719
BfmI CTRYAG 1 cut(s) 116
BfrI CTTAAG 1 cut(s) 2507
BfuAI ACCTGC 1 cut(s) 1902
BisI GCNGC 5 cut(s) 61, 337, 1106, 2503, 2523
BlsI GCNGC 5 cut(s) 62, 338, 1107, 2504, 2524
Bme1390I CCNGG 4 cut(s) 946, 1497, 2214, 2465
Bme18I GGWCC 3 cut(s) 971, 2032, 2258
BmeT110I CYCGRG 3 cut(s) 107, 137, 1708
BmgT120I GGNCC 3 cut(s) 971, 2032, 2258
BmiI GGNNCC 3 cut(s) 850, 1750, 2143
BmrFI CCNGG 4 cut(s) 946, 1497, 2214, 2465
BmsI GCATC 3 cut(s) 466, 1088, 2386
BpiI GAAGAC 4 cut(s) 189, 686, 691, 2111
BplI GAGNNNNNCTC 2 cut(s) 719, 751
BpmI CTGGAG 2 cut(s) 1610, 1859
BpuEI CTTGAG 3 cut(s) 74, 192, 234
BpuMI CCSGG 2 cut(s) 1497, 2465
BsaAI YACGTR 1 cut(s) 376
BsaHI GRCGYC 2 cut(s) 2001, 2302
BsaJI CCNNGG 3 cut(s) 945, 2261, 2463
BsaWI WCCGGW 4 cut(s) 934, 1246, 2083, 2515
BsaXI ACNNNNNCTCC 2 cut(s) 2194, 2224
Bsc4I CCNNNNNNNGG 3 cut(s) 468, 1153, 1246
Bse118I RCCGGY 1 cut(s) 2083
Bse1I ACTGG 1 cut(s) 1796
Bse21I CCTNAGG 2 cut(s) 435, 2297
Bse3DI GCAATG 1 cut(s) 486
BseAI TCCGGA 1 cut(s) 1246
BseBI CCWGG 2 cut(s) 946, 2214
BseDI CCNNGG 3 cut(s) 945, 2261, 2463
BseLI CCNNNNNNNGG 3 cut(s) 468, 1153, 1246
BseMI GCAATG 1 cut(s) 486
BseMII CTCAG 6 cut(s) 1069, 2080, 2166, 2311, 2471, 2520
BseNI ACTGG 1 cut(s) 1796
BseRI GAGGAG 1 cut(s) 155
BseSI GKGCMC 1 cut(s) 1378
BseXI GCAGC 4 cut(s) 47, 1117, 2489, 2509
BsgI GTGCAG 1 cut(s) 1523
Bsh1236I CGCG 3 cut(s) 838, 1434, 2539
BshFI GGCC 1 cut(s) 336
BshTI ACCGGT 1 cut(s) 2083
BsiHKAI GWGCWC 3 cut(s) 138, 1378, 1971
BsiHKCI CYCGRG 3 cut(s) 107, 137, 1708
BsiSI CCGG 7 cut(s) 935, 1247, 1497, 1727, 2084, 2465, 2516
BslI CCNNNNNNNGG 3 cut(s) 468, 1153, 1246
BsmAI GTCTC 5 cut(s) 305, 1082, 1718, 2069, 2476
BsmI GAATGC 1 cut(s) 663
BsnI GGCC 1 cut(s) 336
BsoBI CYCGRG 3 cut(s) 107, 137, 1708
Bsp1286I GDGCHC 4 cut(s) 138, 1378, 1971, 2144
Bsp13I TCCGGA 1 cut(s) 1246
Bsp1407I TGTACA 1 cut(s) 2201
Bsp143I GATC 8 cut(s) 34, 73, 154, 259, 616, 787, 848, 1693
BspACI CCGC 2 cut(s) 337, 2537
BspANI GGCC 1 cut(s) 336
BspCNI CTCAG 6 cut(s) 1068, 2079, 2165, 2310, 2472, 2521
BspEI TCCGGA 1 cut(s) 1246
BspFNI CGCG 3 cut(s) 838, 1434, 2539
BspHI TCATGA 2 cut(s) 507, 1348
BspLI GGNNCC 3 cut(s) 850, 1750, 2143
BspMAI CTGCAG 1 cut(s) 120
BspMI ACCTGC 1 cut(s) 1902
BspPI GGATC 3 cut(s) 843, 856, 1701
BspQI GCTCTTC 1 cut(s) 2475
BspTI CTTAAG 1 cut(s) 2507
BsrDI GCAATG 1 cut(s) 486
BsrFI RCCGGY 1 cut(s) 2083
BsrGI TGTACA 1 cut(s) 2201
BsrI ACTGG 1 cut(s) 1796
BssAI RCCGGY 1 cut(s) 2083
BssECI CCNNGG 3 cut(s) 945, 2261, 2463
BssMI GATC 8 cut(s) 34, 73, 154, 259, 616, 787, 848, 1693
BssNAI GTATAC 1 cut(s) 2021
BssNI GRCGYC 2 cut(s) 2001, 2302
BssSI CACGAG 3 cut(s) 1139, 1682, 1920
BssT1I CCWWGG 1 cut(s) 2261
Bst1107I GTATAC 1 cut(s) 2021
Bst2BI CACGAG 3 cut(s) 1139, 1682, 1920
Bst2UI CCWGG 2 cut(s) 946, 2214
Bst4CI ACNGT 5 cut(s) 11, 466, 954, 1093, 2104
Bst6I CTCTTC 7 cut(s) 142, 160, 1266, 1944, 2179, 2328, 2475
BstACI GRCGYC 2 cut(s) 2001, 2302
BstAFI CTTAAG 1 cut(s) 2507
BstAUI TGTACA 1 cut(s) 2201
BstBAI YACGTR 1 cut(s) 376
BstC8I GCNNGC 4 cut(s) 204, 1043, 1677, 1724
BstFNI CGCG 3 cut(s) 838, 1434, 2539
BstHHI GCGC 1 cut(s) 433
BstKTI GATC 8 cut(s) 37, 76, 157, 262, 619, 790, 851, 1696
BstMAI GTCTC 5 cut(s) 305, 1082, 1718, 2069, 2476
BstMBI GATC 8 cut(s) 34, 73, 154, 259, 616, 787, 848, 1693
BstNI CCWGG 2 cut(s) 946, 2214
BstNSI RCATGY 2 cut(s) 1112, 2546
BstSCI CCNGG 4 cut(s) 944, 1495, 2212, 2463
BstSFI CTRYAG 1 cut(s) 116
BstSLI GKGCMC 1 cut(s) 1378
BstUI CGCG 3 cut(s) 838, 1434, 2539
BstV1I GCAGC 4 cut(s) 47, 1117, 2489, 2509
BstV2I GAAGAC 4 cut(s) 189, 686, 691, 2111
BstX2I RGATCY 2 cut(s) 848, 1693
BstYI RGATCY 2 cut(s) 848, 1693
BstZ17I GTATAC 1 cut(s) 2021
Bsu36I CCTNAGG 2 cut(s) 435, 2297
BsuRI GGCC 1 cut(s) 336
BtsIMutI CAGTG 2 cut(s) 1063, 2526
BveI ACCTGC 1 cut(s) 1902
Cac8I GCNNGC 4 cut(s) 204, 1043, 1677, 1724
CciI TCATGA 2 cut(s) 507, 1348
CfoI GCGC 1 cut(s) 433
Cfr10I RCCGGY 1 cut(s) 2083
Cfr13I GGNCC 3 cut(s) 971, 2032, 2258
CseI GACGC 4 cut(s) 1443, 2009, 2291, 2323
Csp6I GTAC 3 cut(s) 356, 2202, 2495
CspAI ACCGGT 1 cut(s) 2083
CviQI GTAC 3 cut(s) 356, 2202, 2495
DpnI GATC 8 cut(s) 36, 75, 156, 261, 618, 789, 850, 1695
DpnII GATC 8 cut(s) 34, 73, 154, 259, 616, 787, 848, 1693
DraI TTTAAA 1 cut(s) 1200
DraIII CACNNNGTG 2 cut(s) 1058, 1487
EaeI YGGCCR 1 cut(s) 334
Eam1104I CTCTTC 7 cut(s) 142, 160, 1266, 1944, 2179, 2328, 2475
EarI CTCTTC 7 cut(s) 142, 160, 1266, 1944, 2179, 2328, 2475
Ecl136II GAGCTC 1 cut(s) 136
Eco130I CCWWGG 1 cut(s) 2261
Eco24I GRGCYC 2 cut(s) 138, 2144
Eco47I GGWCC 3 cut(s) 971, 2032, 2258
Eco53kI GAGCTC 1 cut(s) 136
Eco72I CACGTG 1 cut(s) 376
Eco81I CCTNAGG 2 cut(s) 435, 2297
Eco88I CYCGRG 3 cut(s) 107, 137, 1708
EcoICRI GAGCTC 1 cut(s) 136
EcoRI GAATTC 1 cut(s) 2411
EcoRII CCWGG 2 cut(s) 944, 2212
EcoT14I CCWWGG 1 cut(s) 2261
EcoT22I ATGCAT 1 cut(s) 1422
EcoT38I GRGCYC 2 cut(s) 138, 2144
ErhI CCWWGG 1 cut(s) 2261
FalI AAGNNNNNCTT 8 cut(s) 207, 239, 1467, 1499, 1540, 1572, 1988, 2020
FauNDI CATATG 1 cut(s) 743
FbaI TGATCA 1 cut(s) 34
FblI GTMKAC 1 cut(s) 2020
Fnu4HI GCNGC 5 cut(s) 61, 337, 1106, 2503, 2523
FriOI GRGCYC 2 cut(s) 138, 2144
Fsp4HI GCNGC 5 cut(s) 61, 337, 1106, 2503, 2523
FspBI CTAG 7 cut(s) 20, 389, 689, 1083, 1134, 1590, 1719
GlaI GCGC 1 cut(s) 432
GluI GCNGC 5 cut(s) 61, 337, 1106, 2503, 2523
GsuI CTGGAG 2 cut(s) 1610, 1859
HaeIII GGCC 1 cut(s) 336
HapII CCGG 7 cut(s) 935, 1247, 1497, 1727, 2084, 2465, 2516
HgaI GACGC 4 cut(s) 1443, 2009, 2291, 2323
HhaI GCGC 1 cut(s) 433
Hin1I GRCGYC 2 cut(s) 2001, 2302
Hin6I GCGC 1 cut(s) 431
HinP1I GCGC 1 cut(s) 431
HindIII AAGCTT 1 cut(s) 2055
HinfI GANTC 6 cut(s) 46, 1114, 1711, 1834, 2448, 2458
HpaII CCGG 7 cut(s) 935, 1247, 1497, 1727, 2084, 2465, 2516
HphI GGTGA 5 cut(s) 83, 856, 920, 1406, 2053
Hpy166II GTNNAC 5 cut(s) 1376, 1397, 1845, 2021, 2032
Hpy188I TCNGA 6 cut(s) 78, 488, 1125, 1572, 2069, 2155
Hpy8I GTNNAC 5 cut(s) 1376, 1397, 1845, 2021, 2032
Hpy99I CGWCG 1 cut(s) 1459
HpyAV CCTTC 8 cut(s) 374, 483, 593, 653, 1292, 1542, 1969, 2249
HpyCH4III ACNGT 5 cut(s) 11, 466, 954, 1093, 2104
HpyCH4IV ACGT 3 cut(s) 41, 375, 759
HpySE526I ACGT 3 cut(s) 41, 375, 759
Hsp92I GRCGYC 2 cut(s) 2001, 2302
HspAI GCGC 1 cut(s) 431
Kpn2I TCCGGA 1 cut(s) 1246
Ksp22I TGATCA 1 cut(s) 34
Kzo9I GATC 8 cut(s) 34, 73, 154, 259, 616, 787, 848, 1693
LguI GCTCTTC 1 cut(s) 2475
LmnI GCTCC 5 cut(s) 795, 1331, 1966, 2147, 2191
Lsp1109I GCAGC 4 cut(s) 47, 1117, 2489, 2509
LweI GCATC 3 cut(s) 466, 1088, 2386
MaeI CTAG 7 cut(s) 20, 389, 689, 1083, 1134, 1590, 1719
MaeII ACGT 3 cut(s) 41, 375, 759
MaeIII GTNAC 4 cut(s) 715, 1655, 1953, 2311
MalI GATC 8 cut(s) 36, 75, 156, 261, 618, 789, 850, 1695
MboI GATC 8 cut(s) 34, 73, 154, 259, 616, 787, 848, 1693
MfeI CAATTG 1 cut(s) 1531
MflI RGATCY 2 cut(s) 848, 1693
MhlI GDGCHC 4 cut(s) 138, 1378, 1971, 2144
MlyI GAGTC 1 cut(s) 1720
MmeI TCCRAC 4 cut(s) 453, 466, 949, 1620
Mph1103I ATGCAT 1 cut(s) 1422
MroI TCCGGA 1 cut(s) 1246
MroXI GAANNNNTTC 3 cut(s) 384, 663, 1164
MslI CAYNNNNRTG 2 cut(s) 54, 2547
MspCI CTTAAG 1 cut(s) 2507
MspI CCGG 7 cut(s) 935, 1247, 1497, 1727, 2084, 2465, 2516
MspR9I CCNGG 4 cut(s) 946, 1497, 2214, 2465
MunI CAATTG 1 cut(s) 1531
Mva1269I GAATGC 1 cut(s) 663
MvaI CCWGG 2 cut(s) 946, 2214
MvnI CGCG 3 cut(s) 838, 1434, 2539
NciI CCSGG 2 cut(s) 1497, 2465
NdeI CATATG 1 cut(s) 743
NdeII GATC 8 cut(s) 34, 73, 154, 259, 616, 787, 848, 1693
NlaIV GGNNCC 3 cut(s) 850, 1750, 2143
NmuCI GTSAC 2 cut(s) 1655, 2311
NsiI ATGCAT 1 cut(s) 1422
NspI RCATGY 2 cut(s) 1112, 2546
PaeR7I CTCGAG 3 cut(s) 107, 137, 1708
PagI TCATGA 2 cut(s) 507, 1348
PciSI GCTCTTC 1 cut(s) 2475
PcsI WCGNNNNNNNCGW 1 cut(s) 1706
PctI GAATGC 1 cut(s) 663
PdmI GAANNNNTTC 3 cut(s) 384, 663, 1164
PfeI GAWTC 5 cut(s) 46, 1114, 1834, 2448, 2458
PflFI GACNNNGTC 2 cut(s) 690, 2317
PinAI ACCGGT 1 cut(s) 2083
PkrI GCNGC 5 cut(s) 62, 338, 1107, 2504, 2524
PleI GAGTC 1 cut(s) 1719
PmaCI CACGTG 1 cut(s) 376
PmlI CACGTG 1 cut(s) 376
PpsI GAGTC 1 cut(s) 1719
Ppu21I YACGTR 1 cut(s) 376
PshBI ATTAAT 1 cut(s) 1823
PsiI TTATAA 1 cut(s) 2090
Psp124BI GAGCTC 1 cut(s) 138
Psp1406I AACGTT 1 cut(s) 41
Psp6I CCWGG 2 cut(s) 944, 2212
PspCI CACGTG 1 cut(s) 376
PspGI CCWGG 2 cut(s) 944, 2212
PspN4I GGNNCC 3 cut(s) 850, 1750, 2143
PspPI GGNCC 3 cut(s) 971, 2032, 2258
PspXI VCTCGAGB 2 cut(s) 137, 1708
PstI CTGCAG 1 cut(s) 120
PsuI RGATCY 2 cut(s) 848, 1693
PsyI GACNNNGTC 2 cut(s) 690, 2317
RsaI GTAC 3 cut(s) 357, 2203, 2496
RsaNI GTAC 3 cut(s) 356, 2202, 2495
RseI CAYNNNNRTG 2 cut(s) 54, 2547
SacI GAGCTC 1 cut(s) 138
SapI GCTCTTC 1 cut(s) 2475
SatI GCNGC 5 cut(s) 61, 337, 1106, 2503, 2523
Sau3AI GATC 8 cut(s) 34, 73, 154, 259, 616, 787, 848, 1693
Sau96I GGNCC 3 cut(s) 971, 2032, 2258
SchI GAGTC 1 cut(s) 1720
ScrFI CCNGG 4 cut(s) 946, 1497, 2214, 2465
SduI GDGCHC 4 cut(s) 138, 1378, 1971, 2144
SfaNI GCATC 3 cut(s) 466, 1088, 2386
SfcI CTRYAG 1 cut(s) 116
Sfr274I CTCGAG 3 cut(s) 107, 137, 1708
SinI GGWCC 3 cut(s) 971, 2032, 2258
SlaI CTCGAG 3 cut(s) 107, 137, 1708
SmiMI CAYNNNNRTG 2 cut(s) 54, 2547
SmlI CTYRAG 7 cut(s) 89, 107, 137, 207, 249, 1708, 2507
SmoI CTYRAG 7 cut(s) 89, 107, 137, 207, 249, 1708, 2507
SsiI CCGC 2 cut(s) 337, 2537
SspI AATATT 3 cut(s) 1286, 2094, 2244
SspMI CTAG 7 cut(s) 20, 389, 689, 1083, 1134, 1590, 1719
SstI GAGCTC 1 cut(s) 138
StyD4I CCNGG 4 cut(s) 944, 1495, 2212, 2463
StyI CCWWGG 1 cut(s) 2261
TaaI ACNGT 5 cut(s) 11, 466, 954, 1093, 2104
TaiI ACGT 3 cut(s) 44, 378, 762
TaqI TCGA 5 cut(s) 108, 138, 1457, 1700, 1709
TaqII GACCGA 1 cut(s) 2049
TatI WGTACW 2 cut(s) 355, 2201
TauI GCSGC 1 cut(s) 339
TfiI GAWTC 5 cut(s) 46, 1114, 1834, 2448, 2458
TscAI CASTG 2 cut(s) 1063, 2533
TseFI GTSAC 2 cut(s) 1655, 2311
TseI GCWGC 4 cut(s) 60, 1105, 2502, 2522
Tsp45I GTSAC 2 cut(s) 1655, 2311
TspGWI ACGGA 2 cut(s) 360, 2385
TspRI CASTG 2 cut(s) 1063, 2533
Tth111I GACNNNGTC 2 cut(s) 690, 2317
Vha464I CTTAAG 1 cut(s) 2507
VneI GTGCAC 1 cut(s) 1374
VpaK11BI GGWCC 3 cut(s) 971, 2032, 2258
VspI ATTAAT 1 cut(s) 1823
XapI RAATTY 6 cut(s) 322, 423, 590, 767, 1164, 2411
XbaI TCTAGA 1 cut(s) 1082
XceI RCATGY 2 cut(s) 1112, 2546
XcmI CCANNNNNNNNNTGG 3 cut(s) 464, 469, 965
XhoI CTCGAG 3 cut(s) 107, 137, 1708
XmiI GTMKAC 1 cut(s) 2020
XmnI GAANNNNTTC 3 cut(s) 384, 663, 1164
XspI CTAG 7 cut(s) 20, 389, 689, 1083, 1134, 1590, 1719
Zsp2I ATGCAT 1 cut(s) 1422
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.