AT1G36005

protein serine/threonine kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0001240
Physical Location & Seq
Forward (+)
13432418 .. 13433062
645 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G36005.1

Sequence Viewer

Length: 531 bp
ATGTTCAAGTTACTACTGAAACAGTACACTTATGCAGAATTGAAGATTACAAAGTCGTTTTCCCACACCGTTGGGAAAGGAGGGTTTGGAACTGTATATAGAGGAAACCTTTCTAATGGACGTACGGTTGCAGTAAAGGTCTTGAAGGATTTGAAGGGAAACAGTGACGATTTCATCAACAAAGTCACCAGCATGAGCCAAACATCTCATGTAAACATTGTTTCTCTGCTAGGGTCCAAAAGAGCGATTATATCAGAGTTTTTGGAGCATGGGTCTTTGGATCAGTTAATGTCTAGAAATAAATCATTGACTCCGGACGTGACAACACTATATGGAATCGCGCTAGGAGTATATGCACTATGGCTGCAAAACAAGAATTGTGCACTATGGCGACAAACCTTATTCTACAGCAAAATTTGGTCCGCCAGCTTTGAAAGTAGAATAAAGAATCGAAGTTTAGAAACATGTGTTTCTTGTCCATCTCATGTTGACCAATTGAAGTTTAGCAACAAGTTTATTTATGAACGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0006950 GO:0006952 GO:0006968 GO:0008150 GO:0050896
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Malectin_like Pkinase Pkinase_Tyr WAK_assoc

Protein Analysis

176

Amino Acids

19.92

Weight (kDa)

9.76

Isoelectric Point (pI)

29.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 20 - 106 5.7e-14 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 21 - 110 2.9e-09 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 341
AccIII TCCGGA 1 cut(s) 313
AciI CCGC 1 cut(s) 423
AclWI GGATC 1 cut(s) 288
AcsI RAATTY 1 cut(s) 414
AfaI GTAC 2 cut(s) 26, 124
AflIII ACRYGT 1 cut(s) 464
AgsI TTSAA 6 cut(s) 7, 43, 145, 154, 434, 499
AjiI CACGTC 1 cut(s) 319
AluBI AGCT 1 cut(s) 429
AluI AGCT 1 cut(s) 429
Alw21I GWGCWC 1 cut(s) 385
Alw44I GTGCAC 1 cut(s) 381
AlwI GGATC 1 cut(s) 288
Aor13HI TCCGGA 1 cut(s) 313
ApaLI GTGCAC 1 cut(s) 381
ApeKI GCWGC 1 cut(s) 364
ApoI RAATTY 1 cut(s) 414
Asp700I GAANNNNTTC 1 cut(s) 109
AspLEI GCGC 1 cut(s) 343
AspS9I GGNCC 2 cut(s) 234, 420
AsuHPI GGTGA 1 cut(s) 178
AvaII GGWCC 2 cut(s) 234, 420
BaeGI GKGCMC 1 cut(s) 385
Bbv12I GWGCWC 1 cut(s) 385
BbvI GCAGC 1 cut(s) 351
BccI CCATC 1 cut(s) 487
BfaI CTAG 3 cut(s) 230, 294, 344
BfmI CTRYAG 1 cut(s) 406
BisI GCNGC 1 cut(s) 365
BlsI GCNGC 1 cut(s) 366
Bme18I GGWCC 2 cut(s) 234, 420
BmgBI CACGTC 1 cut(s) 319
BmgT120I GGNCC 2 cut(s) 234, 420
BmiI GGNNCC 1 cut(s) 235
BsaWI WCCGGW 1 cut(s) 313
BsaXI ACNNNNNCTCC 2 cut(s) 257, 287
BseAI TCCGGA 1 cut(s) 313
BseSI GKGCMC 1 cut(s) 385
BseXI GCAGC 1 cut(s) 351
Bsh1236I CGCG 1 cut(s) 341
BsiHKAI GWGCWC 1 cut(s) 385
BsiSI CCGG 1 cut(s) 314
BsiWI CGTACG 1 cut(s) 122
Bsp1286I GDGCHC 1 cut(s) 385
Bsp13I TCCGGA 1 cut(s) 313
Bsp143I GATC 1 cut(s) 280
BspACI CCGC 1 cut(s) 423
BspEI TCCGGA 1 cut(s) 313
BspFNI CGCG 1 cut(s) 341
BspLI GGNNCC 1 cut(s) 235
BspPI GGATC 1 cut(s) 288
BssMI GATC 1 cut(s) 280
Bst4CI ACNGT 5 cut(s) 24, 70, 94, 127, 164
BstC8I GCNNGC 1 cut(s) 427
BstFNI CGCG 1 cut(s) 341
BstHHI GCGC 1 cut(s) 343
BstKTI GATC 1 cut(s) 283
BstMBI GATC 1 cut(s) 280
BstNSI RCATGY 1 cut(s) 468
BstSFI CTRYAG 1 cut(s) 406
BstSLI GKGCMC 1 cut(s) 385
BstUI CGCG 1 cut(s) 341
BstV1I GCAGC 1 cut(s) 351
BstXI CCANNNNNNTGG 1 cut(s) 71
BtrI CACGTC 1 cut(s) 319
BtsIMutI CAGTG 1 cut(s) 169
Cac8I GCNNGC 1 cut(s) 427
CfoI GCGC 1 cut(s) 343
Cfr13I GGNCC 2 cut(s) 234, 420
Csp6I GTAC 2 cut(s) 25, 123
CviAII CATG 5 cut(s) 193, 209, 269, 465, 485
CviJI RGCY 3 cut(s) 198, 364, 429
CviKI_1 RGCY 3 cut(s) 198, 364, 429
CviQI GTAC 2 cut(s) 25, 123
DpnI GATC 1 cut(s) 282
DpnII GATC 1 cut(s) 280
EciI GGCGGA 1 cut(s) 412
Eco47I GGWCC 2 cut(s) 234, 420
FaeI CATG 5 cut(s) 196, 212, 272, 468, 488
FatI CATG 5 cut(s) 192, 208, 268, 464, 484
Fnu4HI GCNGC 1 cut(s) 365
Fsp4HI GCNGC 1 cut(s) 365
FspBI CTAG 3 cut(s) 230, 294, 344
GlaI GCGC 1 cut(s) 342
GluI GCNGC 1 cut(s) 365
HapII CCGG 1 cut(s) 314
HhaI GCGC 1 cut(s) 343
Hin1II CATG 5 cut(s) 196, 212, 272, 468, 488
Hin6I GCGC 1 cut(s) 341
HinP1I GCGC 1 cut(s) 341
HincII GTYRAC 1 cut(s) 490
HindII GTYRAC 1 cut(s) 490
HinfI GANTC 3 cut(s) 310, 336, 448
HpaII CCGG 1 cut(s) 314
HphI GGTGA 1 cut(s) 178
Hpy166II GTNNAC 4 cut(s) 27, 214, 383, 490
Hpy188I TCNGA 1 cut(s) 256
Hpy188III TCNNGA 3 cut(s) 142, 294, 314
Hpy8I GTNNAC 4 cut(s) 27, 214, 383, 490
HpyAV CCTTC 2 cut(s) 139, 148
HpyCH4III ACNGT 5 cut(s) 24, 70, 94, 127, 164
HpyCH4IV ACGT 2 cut(s) 121, 318
HpyCH4V TGCA 5 cut(s) 35, 131, 356, 367, 383
HpySE526I ACGT 2 cut(s) 121, 318
Hsp92II CATG 5 cut(s) 196, 212, 272, 468, 488
HspAI GCGC 1 cut(s) 341
Kpn2I TCCGGA 1 cut(s) 313
Kzo9I GATC 1 cut(s) 280
LmnI GCTCC 1 cut(s) 265
LpnPI CCDG 3 cut(s) 202, 327, 439
Lsp1109I GCAGC 1 cut(s) 351
MaeI CTAG 3 cut(s) 230, 294, 344
MaeII ACGT 2 cut(s) 121, 318
MaeIII GTNAC 4 cut(s) 9, 164, 184, 319
MalI GATC 1 cut(s) 282
MboI GATC 1 cut(s) 280
MboII GAAGA 1 cut(s) 55
MfeI CAATTG 1 cut(s) 494
MhlI GDGCHC 1 cut(s) 385
MluCI AATT 4 cut(s) 38, 376, 414, 494
MlyI GAGTC 1 cut(s) 304
MnlI CCTC 2 cut(s) 74, 95
MroI TCCGGA 1 cut(s) 313
MroXI GAANNNNTTC 1 cut(s) 109
MseI TTAA 1 cut(s) 287
MslI CAYNNNNRTG 1 cut(s) 191
MspI CCGG 1 cut(s) 314
MunI CAATTG 1 cut(s) 494
MvnI CGCG 1 cut(s) 341
NdeII GATC 1 cut(s) 280
NlaIII CATG 5 cut(s) 196, 212, 272, 468, 488
NlaIV GGNNCC 1 cut(s) 235
NmuCI GTSAC 3 cut(s) 164, 184, 319
NspI RCATGY 1 cut(s) 468
PciI ACATGT 1 cut(s) 464
PdmI GAANNNNTTC 1 cut(s) 109
PfeI GAWTC 2 cut(s) 336, 448
Pfl23II CGTACG 1 cut(s) 122
PkrI GCNGC 1 cut(s) 366
PleI GAGTC 1 cut(s) 304
PpsI GAGTC 1 cut(s) 304
PscI ACATGT 1 cut(s) 464
PspLI CGTACG 1 cut(s) 122
PspN4I GGNNCC 1 cut(s) 235
PspPI GGNCC 2 cut(s) 234, 420
RsaI GTAC 2 cut(s) 26, 124
RsaNI GTAC 2 cut(s) 25, 123
RseI CAYNNNNRTG 1 cut(s) 191
SaqAI TTAA 1 cut(s) 287
SatI GCNGC 1 cut(s) 365
Sau3AI GATC 1 cut(s) 280
Sau96I GGNCC 2 cut(s) 234, 420
SchI GAGTC 1 cut(s) 304
SduI GDGCHC 1 cut(s) 385
SetI ASST 6 cut(s) 111, 124, 141, 321, 401, 431
SfcI CTRYAG 1 cut(s) 406
SinI GGWCC 2 cut(s) 234, 420
SmiMI CAYNNNNRTG 1 cut(s) 191
Sse9I AATT 4 cut(s) 38, 376, 414, 494
SsiI CCGC 1 cut(s) 423
SspMI CTAG 3 cut(s) 230, 294, 344
TaaI ACNGT 5 cut(s) 24, 70, 94, 127, 164
TaiI ACGT 2 cut(s) 124, 321
TaqI TCGA 1 cut(s) 451
TasI AATT 4 cut(s) 38, 376, 414, 494
TatI WGTACW 1 cut(s) 24
TfiI GAWTC 2 cut(s) 336, 448
Tru1I TTAA 1 cut(s) 287
Tru9I TTAA 1 cut(s) 287
TscAI CASTG 1 cut(s) 169
TseFI GTSAC 3 cut(s) 164, 184, 319
TseI GCWGC 1 cut(s) 364
Tsp45I GTSAC 3 cut(s) 164, 184, 319
TspDTI ATGAA 1 cut(s) 163
TspRI CASTG 1 cut(s) 169
VneI GTGCAC 1 cut(s) 381
VpaK11BI GGWCC 2 cut(s) 234, 420
XapI RAATTY 1 cut(s) 414
XbaI TCTAGA 1 cut(s) 293
XceI RCATGY 1 cut(s) 468
XmnI GAANNNNTTC 1 cut(s) 109
XspI CTAG 3 cut(s) 230, 294, 344
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.