AT2G02580

cytochrome P450

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
701932 .. 703798
1867 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G02580.1

Sequence Viewer

Length: 1503 bp
ATGGCTACGATTTGGTTTCTTTCACTTCTCTTTCTCTGTTGTATTCTCCTCGCCGCCTTTAAACACAAGAAGCGTCGGACAAATCAGCAGCAACCACCGTCCCCTCCTGGCTTTCCGATCATCGGAAACTTGCATCAGCTTGGAGAATTACCACATCAATCTCTATGGAGTCTTTCCAAAACGTATGGTCCGGTGATGCTTTTGAAGCTTGGAAGTGTCCCAACGGTCGTAGTTTCTTCTTCTGAGACGGCAAAACAAGTTCTGAAAATCAATGATCTACATTGTTGTAGCCGTCCTAGCTTAGCAGGGGCAAAAGAGCTCTCTTACAATTACTTGGACATTGCTTTCTCTCCTTTTGATGATTATTGGAAAGAATTAAGGAGGATTTGTGTCCAAGAACTCTTTAGTGCTAAGCGAGTTCACTCTATTCAACCCATCAAGGAAGAAGAAGTGAGGAAACTGATCGTTTCAGCCACGGAATCAGCCTCTCAGAAATCACCAGTTAACTTGAGCGAGAAGTTTCTTGATTTAACTGTAAGCGTGATATGCAAGGCAGCATTCAGTCTAGACTTCCATACTTCAGTTCTCAATAATGATGGATTTGACAAGTTAATCCACGATGCGTTTTTGTTTTTGGGGAGCTTCTCGGCCTCAAACTTCTTCCCAAATGGTGGCTGGATCATCGACTGGCTCACGGGTCTACAAAGGCGGAGAGAAAAAAGCGTCAAGGATCTTGATGTGTTCTATCAACAAATGTTTGATCTGCATAAACAAGAAAACAAACAAGGAGTCGAAGATTTCGTGGACTTGCTCTTGAAGTTAGAGAAAGAAGAAACTGTTCTTGGATATGGCAAGCTCACAAGAAACCATGTCAAAGCCATCTTAATGAACGTTCTTCTTGGGGCCATCAATACTTCTGCAATGACAATGACATGGGCCATGGCAGAACTAATAAGAAACCCGCGAGTGATGAAGAAAGTACAATCCGAAATCAGAAACCAAATGATAAACAAATCAGTGATCACCTTAGATGATATAGATCATCTACCTTACTTGAAGATGGTGATCAAAGAAACATGGAGGCTACATCCTCCAGTACCTCTTCTACTTCCAAGAGAAGTTATGTCTGAATTTGAGATCAATGGCTACAAGATACAACCCAAGACATTGCTTTACGTGAATGTTTGGGCTATAGGGCGTGATCCTGATTCCTGGAAAGATGCAGATATGTTTTATCCAGAAAGGTTTATGGATAATAACATTGATGCTAAAGGACAGAACTTTGAGCTGTTACCGTTTGGAAGTGGCCGGAGAATCTGTCCTGGAATGTACATGGGGACAACAATGGTGGAGTTTGGTCTAGCGAATATGTTGTATCAGTTTGATTGGGAAGTACCAGATGGTATGGTGGTCGAAGATATTGACATGGAAGAATCTCCTGGACTCGCCGTGGGCAAAAAAAATGAGCTTCTACTTGTTCCTGTCAAGTATTTAGGTCATTGA

Protein Analysis

500

Amino Acids

57.08

Weight (kDa)

6.65

Isoelectric Point (pI)

46.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 32 - 490 9.5e-101 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000354)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13080 AT1G13080 AT1G13090 AT1G13090 AT1G13100 AT1G13110 AT2G02580 AT2G24180 AT3G26150 AT3G26160 AT3G26170 AT3G26180 AT3G26180 AT3G26190 AT3G26200 AT3G26210 AT3G26290 AT3G26290 AT3G26300 AT3G26310 AT3G26320 AT3G26330 AT3G26830 AT3G44250 AT3G53280 AT3G53290 AT3G53300 AT3G53305 AT5G25120 AT5G25130 AT5G25140 AT5G25180 AT5G35715 AT5G57260
fragaria_vesca FvH4_4g25390 FvH4_4g25390 FvH4_4g25390
malus_domestica MD13G1103500.v1.1 MD13G1103800.v1.1 MD13G1104100.v1.1 MD16G1103600.v1.1 MD16G1104000.v1.1 MD16G1104200.v1.1 MD16G1104300.v1.1
prunus_persica Prupe.1G170800_v2.0.a1 Prupe.1G242300_v2.0.a1 Prupe.1G242400_v2.0.a1
pyrus_communis pycom13g09040 pycom16g08850 pycom16g08860
rosa_chinensis RchiOBHm_Chr4g0419321 RchiOBHm_Chr4g0419411 RchiOBHm_Chr4g0419461 RchiOBHm_Chr4g0419481 RchiOBHm_Chr4g0419491 RchiOBHm_Chr4g0419571 RchiOBHm_Chr4g0432681 RchiOBHm_Chr4g0432701 RchiOBHm_Chr5g0025811
rosa_laevigata RLG00000003494 RLG00000006819 RLG00000006820 RLG00000006821 RLG00000006823 RLG00000007814 RLG00000007815 RLG00000032878
rosa_multiflora Rmu_co8315439.1_g000001 Rmu_sc0000455.1_g000013 Rmu_sc0000455.1_g000035 Rmu_sc0000455.1_g000058 Rmu_sc0000675.1_g000043 Rmu_sc0001912.1_g000035 Rmu_sc0002401.1_g000014 Rmu_sc0004932.1_g000013 Rmu_sc0008245.1_g000007 Rmu_sc0009481.1_g000005 Rmu_ssc0000467.1_g000029
rosa_roxburghii Rroxscaffold_1G00053390 Rroxscaffold_1G00054350 Rroxscaffold_4G00324380 Rroxscaffold_5G00362300 Rroxscaffold_5G00362360 Rroxscaffold_5G00374140 Rroxscaffold_5G00374160
rosa_rugosa Rorug04G0158300 Rorug04G0261600 Rorug04G0261700 Rorug04G0261800
rosa_samantha Rh4AG220300 Rh4AG316100 Rh4BG221600 Rh4BG222000 Rh4BG222100 Rh4BG222200 Rh4BG324100 Rh4CG233000 Rh4CG233100 Rh4CG233200 Rh4CG233900 Rh4CG339100 Rh4DG319500
rosa_wichuraiana Rw4G018840 Rw4G018880 Rw4G018900 Rw4G018930 Rw4G027500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 671
AccI GTMKAC 1 cut(s) 700
AccII CGCG 1 cut(s) 964
AciI CCGC 3 cut(s) 54, 709, 962
AclI AACGTT 1 cut(s) 891
AclWI GGATC 3 cut(s) 686, 738, 1196
AcoI YGGCCR 1 cut(s) 1306
AcsI RAATTY 1 cut(s) 1130
AcuI CTGAAG 1 cut(s) 564
AfaI GTAC 4 cut(s) 981, 1098, 1331, 1395
AfiI CCNNNNNNNGG 2 cut(s) 122, 671
AgsI TTSAA 4 cut(s) 205, 431, 817, 1057
AjnI CCWGG 4 cut(s) 106, 1211, 1321, 1438
AjuI GAANNNNNNNTTGG 2 cut(s) 825, 857
AluBI AGCT 8 cut(s) 139, 208, 300, 319, 642, 856, 1288, 1468
AluI AGCT 8 cut(s) 139, 208, 300, 319, 642, 856, 1288, 1468
Alw21I GWGCWC 1 cut(s) 321
Alw26I GTCTC 1 cut(s) 239
AlwI GGATC 3 cut(s) 686, 738, 1196
AoxI GGCC 4 cut(s) 648, 903, 936, 1306
ApeKI GCWGC 2 cut(s) 88, 554
ApoI RAATTY 1 cut(s) 1130
ArsI GACNNNNNNTTYG 2 cut(s) 774, 806
Asp700I GAANNNNTTC 1 cut(s) 837
AspS9I GGNCC 3 cut(s) 188, 903, 936
AsuHPI GGTGA 4 cut(s) 205, 489, 1015, 1075
AvaII GGWCC 1 cut(s) 188
BanII GRGCYC 1 cut(s) 321
Bbv12I GWGCWC 1 cut(s) 321
BbvI GCAGC 2 cut(s) 100, 566
BccI CCATC 6 cut(s) 443, 590, 887, 914, 1054, 1394
BceAI ACGGC 3 cut(s) 264, 276, 1433
BciT130I CCWGG 4 cut(s) 108, 1213, 1323, 1440
BclI TGATCA 2 cut(s) 1020, 1065
BcoDI GTCTC 1 cut(s) 239
BfaI CTAG 3 cut(s) 297, 566, 1361
BfmI CTRYAG 1 cut(s) 1191
BisI GCNGC 3 cut(s) 54, 89, 555
BlpI GCTNAGC 2 cut(s) 301, 411
BlsI GCNGC 3 cut(s) 55, 90, 556
Bme1390I CCNGG 4 cut(s) 108, 1213, 1323, 1440
Bme18I GGWCC 1 cut(s) 188
BmgT120I GGNCC 3 cut(s) 188, 903, 936
BmiI GGNNCC 1 cut(s) 904
BmrFI CCNGG 4 cut(s) 108, 1213, 1323, 1440
BmsI GCATC 5 cut(s) 142, 186, 610, 1210, 1255
BpmI CTGGAG 1 cut(s) 1077
Bpu1102I GCTNAGC 2 cut(s) 301, 411
BpuEI CTTGAG 1 cut(s) 529
BsaAI YACGTR 1 cut(s) 1177
BsaBI GATNNNNATC 2 cut(s) 1038, 1064
BsaJI CCNNGG 3 cut(s) 474, 939, 1449
BsaWI WCCGGW 1 cut(s) 190
BsaXI ACNNNNNCTCC 4 cut(s) 373, 403, 1303, 1333
Bsc4I CCNNNNNNNGG 2 cut(s) 122, 671
Bse1I ACTGG 3 cut(s) 500, 692, 1094
Bse3DI GCAATG 3 cut(s) 339, 927, 1166
Bse8I GATNNNNATC 2 cut(s) 1038, 1064
BseBI CCWGG 4 cut(s) 108, 1213, 1323, 1440
BseDI CCNNGG 3 cut(s) 474, 939, 1449
BseGI GGATG 1 cut(s) 1087
BseJI GATNNNNATC 2 cut(s) 1038, 1064
BseLI CCNNNNNNNGG 2 cut(s) 122, 671
BseMI GCAATG 3 cut(s) 339, 927, 1166
BseMII CTCAG 2 cut(s) 234, 503
BseNI ACTGG 3 cut(s) 500, 692, 1094
BseRI GAGGAG 1 cut(s) 38
BseXI GCAGC 2 cut(s) 100, 566
Bsh1236I CGCG 1 cut(s) 964
Bsh1285I CGRYCG 1 cut(s) 228
BshFI GGCC 4 cut(s) 650, 905, 938, 1308
BsiEI CGRYCG 1 cut(s) 228
BsiHKAI GWGCWC 1 cut(s) 321
BsiSI CCGG 2 cut(s) 191, 1309
BslFI GGGAC 3 cut(s) 85, 203, 1351
BslI CCNNNNNNNGG 2 cut(s) 122, 671
BsmAI GTCTC 1 cut(s) 239
BsmBI CGTCTC 1 cut(s) 239
BsmFI GGGAC 3 cut(s) 85, 203, 1351
BsmI GAATGC 1 cut(s) 557
BsnI GGCC 4 cut(s) 650, 905, 938, 1308
Bsp1286I GDGCHC 1 cut(s) 321
Bsp1407I TGTACA 1 cut(s) 1329
Bsp1720I GCTNAGC 2 cut(s) 301, 411
Bsp19I CCATGG 1 cut(s) 939
BspACI CCGC 3 cut(s) 54, 709, 962
BspANI GGCC 4 cut(s) 650, 905, 938, 1308
BspCNI CTCAG 2 cut(s) 235, 502
BspFNI CGCG 1 cut(s) 964
BspLI GGNNCC 1 cut(s) 904
BspPI GGATC 3 cut(s) 686, 738, 1196
BsrDI GCAATG 3 cut(s) 339, 927, 1166
BsrGI TGTACA 1 cut(s) 1329
BsrI ACTGG 3 cut(s) 500, 692, 1094
BssECI CCNNGG 3 cut(s) 474, 939, 1449
BssT1I CCWWGG 1 cut(s) 939
Bst2UI CCWGG 4 cut(s) 108, 1213, 1323, 1440
Bst4CI ACNGT 5 cut(s) 99, 226, 535, 838, 1296
Bst6I CTCTTC 1 cut(s) 1107
BstAUI TGTACA 1 cut(s) 1329
BstBAI YACGTR 1 cut(s) 1177
BstC8I GCNNGC 1 cut(s) 854
BstDEI CTNAG 5 cut(s) 243, 301, 411, 489, 1027
BstDSI CCRYGG 3 cut(s) 474, 939, 1449
BstF5I GGATG 1 cut(s) 1087
BstFNI CGCG 1 cut(s) 964
BstMAI GTCTC 1 cut(s) 239
BstMCI CGRYCG 1 cut(s) 228
BstMWI GCNNNNNNNGC 3 cut(s) 205, 297, 546
BstNI CCWGG 4 cut(s) 108, 1213, 1323, 1440
BstSCI CCNGG 4 cut(s) 106, 1211, 1321, 1438
BstSFI CTRYAG 1 cut(s) 1191
BstUI CGCG 1 cut(s) 964
BstV1I GCAGC 2 cut(s) 100, 566
BstX2I RGATCY 1 cut(s) 730
BstYI RGATCY 1 cut(s) 730
BsuRI GGCC 4 cut(s) 650, 905, 938, 1308
BtgI CCRYGG 3 cut(s) 474, 939, 1449
BtsCI GGATG 1 cut(s) 1087
BtsIMutI CAGTG 1 cut(s) 1023
Cac8I GCNNGC 1 cut(s) 854
Cfr13I GGNCC 3 cut(s) 188, 903, 936
CseI GACGC 2 cut(s) 62, 712
Csp6I GTAC 4 cut(s) 980, 1097, 1330, 1394
CspCI CAANNNNNGTGG 2 cut(s) 1329, 1364
CviAII CATG 6 cut(s) 869, 933, 940, 1077, 1333, 1426
CviQI GTAC 4 cut(s) 980, 1097, 1330, 1394
DdeI CTNAG 5 cut(s) 243, 301, 411, 489, 1027
DraI TTTAAA 1 cut(s) 61
EaeI YGGCCR 1 cut(s) 1306
Eam1104I CTCTTC 1 cut(s) 1107
EarI CTCTTC 1 cut(s) 1107
EciI GGCGGA 1 cut(s) 724
Ecl136II GAGCTC 1 cut(s) 319
Eco130I CCWWGG 1 cut(s) 939
Eco24I GRGCYC 1 cut(s) 321
Eco47I GGWCC 1 cut(s) 188
Eco53kI GAGCTC 1 cut(s) 319
Eco57I CTGAAG 1 cut(s) 564
EcoICRI GAGCTC 1 cut(s) 319
EcoRII CCWGG 4 cut(s) 106, 1211, 1321, 1438
EcoT14I CCWWGG 1 cut(s) 939
EcoT38I GRGCYC 1 cut(s) 321
ErhI CCWWGG 1 cut(s) 939
Esp3I CGTCTC 1 cut(s) 239
FaeI CATG 6 cut(s) 872, 936, 943, 1080, 1336, 1429
FaqI GGGAC 3 cut(s) 85, 203, 1351
FatI CATG 6 cut(s) 868, 932, 939, 1076, 1332, 1425
FauI CCCGC 1 cut(s) 969
FbaI TGATCA 2 cut(s) 1020, 1065
FblI GTMKAC 1 cut(s) 700
Fnu4HI GCNGC 3 cut(s) 54, 89, 555
FokI GGATG 1 cut(s) 1074
FriOI GRGCYC 1 cut(s) 321
Fsp4HI GCNGC 3 cut(s) 54, 89, 555
FspBI CTAG 3 cut(s) 297, 566, 1361
GluI GCNGC 3 cut(s) 54, 89, 555
GsuI CTGGAG 1 cut(s) 1077
HaeIII GGCC 4 cut(s) 650, 905, 938, 1308
HapII CCGG 2 cut(s) 191, 1309
HgaI GACGC 2 cut(s) 62, 712
Hin1II CATG 6 cut(s) 872, 936, 943, 1080, 1336, 1429
HincII GTYRAC 1 cut(s) 505
HindII GTYRAC 1 cut(s) 505
HindIII AAGCTT 1 cut(s) 206
HinfI GANTC 7 cut(s) 169, 479, 789, 1208, 1314, 1433, 1443
HpaI GTTAAC 1 cut(s) 505
HpaII CCGG 2 cut(s) 191, 1309
HphI GGTGA 4 cut(s) 205, 489, 1015, 1075
Hpy166II GTNNAC 4 cut(s) 421, 505, 701, 805
Hpy188I TCNGA 9 cut(s) 78, 117, 125, 244, 264, 492, 988, 995, 1129
Hpy188III TCNNGA 6 cut(s) 524, 566, 734, 814, 1205, 1238
Hpy8I GTNNAC 4 cut(s) 421, 505, 701, 805
Hpy99I CGWCG 1 cut(s) 78
HpyCH4III ACNGT 5 cut(s) 99, 226, 535, 838, 1296
HpyCH4IV ACGT 3 cut(s) 182, 891, 1176
HpyCH4V TGCA 5 cut(s) 133, 549, 766, 920, 1223
HpyF10VI GCNNNNNNNGC 3 cut(s) 205, 297, 546
HpyF3I CTNAG 5 cut(s) 243, 301, 411, 489, 1027
HpySE526I ACGT 3 cut(s) 182, 891, 1176
Hsp92II CATG 6 cut(s) 872, 936, 943, 1080, 1336, 1429
Ksp22I TGATCA 2 cut(s) 1020, 1065
KspAI GTTAAC 1 cut(s) 505
LmnI GCTCC 1 cut(s) 639
Lsp1109I GCAGC 2 cut(s) 100, 566
LweI GCATC 5 cut(s) 142, 186, 610, 1210, 1255
MaeI CTAG 3 cut(s) 297, 566, 1361
MaeII ACGT 3 cut(s) 182, 891, 1176
MaeIII GTNAC 1 cut(s) 1290
MflI RGATCY 1 cut(s) 730
MhlI GDGCHC 1 cut(s) 321
MluCI AATT 4 cut(s) 146, 328, 374, 1130
MlyI GAGTC 3 cut(s) 178, 798, 1437
MmeI TCCRAC 1 cut(s) 56
MnlI CCTC 9 cut(s) 59, 114, 375, 447, 496, 661, 1074, 1101, 1110
MroXI GAANNNNTTC 1 cut(s) 837
MseI TTAA 6 cut(s) 60, 377, 504, 530, 611, 884
MslI CAYNNNNRTG 1 cut(s) 884
MspI CCGG 2 cut(s) 191, 1309
MspR9I CCNGG 4 cut(s) 108, 1213, 1323, 1440
Mva1269I GAATGC 1 cut(s) 557
MvaI CCWGG 4 cut(s) 108, 1213, 1323, 1440
MvnI CGCG 1 cut(s) 964
MwoI GCNNNNNNNGC 3 cut(s) 205, 297, 546
NcoI CCATGG 1 cut(s) 939
NlaIII CATG 6 cut(s) 872, 936, 943, 1080, 1336, 1429
NlaIV GGNNCC 1 cut(s) 904
NmeAIII GCCGAG 1 cut(s) 626
PcsI WCGNNNNNNNCGW 1 cut(s) 798
PctI GAATGC 1 cut(s) 557
PdmI GAANNNNTTC 1 cut(s) 837
PfeI GAWTC 4 cut(s) 479, 1208, 1314, 1433
PflMI CCANNNNNTGG 1 cut(s) 671
PfoI TCCNGGA 3 cut(s) 1211, 1321, 1438
PkrI GCNGC 3 cut(s) 55, 90, 556
PleI GAGTC 3 cut(s) 177, 797, 1437
PpsI GAGTC 3 cut(s) 177, 797, 1437
Ppu21I YACGTR 1 cut(s) 1177
Psp124BI GAGCTC 1 cut(s) 321
Psp1406I AACGTT 1 cut(s) 891
Psp6I CCWGG 4 cut(s) 106, 1211, 1321, 1438
PspGI CCWGG 4 cut(s) 106, 1211, 1321, 1438
PspN4I GGNNCC 1 cut(s) 904
PspPI GGNCC 3 cut(s) 188, 903, 936
PsuI RGATCY 1 cut(s) 730
RsaI GTAC 4 cut(s) 981, 1098, 1331, 1395
RsaNI GTAC 4 cut(s) 980, 1097, 1330, 1394
RseI CAYNNNNRTG 1 cut(s) 884
SacI GAGCTC 1 cut(s) 321
SaqAI TTAA 6 cut(s) 60, 377, 504, 530, 611, 884
SatI GCNGC 3 cut(s) 54, 89, 555
Sau96I GGNCC 3 cut(s) 188, 903, 936
SchI GAGTC 3 cut(s) 178, 798, 1437
ScrFI CCNGG 4 cut(s) 108, 1213, 1323, 1440
SduI GDGCHC 1 cut(s) 321
SfaNI GCATC 5 cut(s) 142, 186, 610, 1210, 1255
SfcI CTRYAG 1 cut(s) 1191
SinI GGWCC 1 cut(s) 188
SmiMI CAYNNNNRTG 1 cut(s) 884
SmlI CTYRAG 1 cut(s) 508
SmoI CTYRAG 1 cut(s) 508
Sse9I AATT 4 cut(s) 146, 328, 374, 1130
SsiI CCGC 3 cut(s) 54, 709, 962
SspMI CTAG 3 cut(s) 297, 566, 1361
SstI GAGCTC 1 cut(s) 321
StyD4I CCNGG 4 cut(s) 106, 1211, 1321, 1438
StyI CCWWGG 1 cut(s) 939
TaaI ACNGT 5 cut(s) 99, 226, 535, 838, 1296
TaiI ACGT 3 cut(s) 185, 894, 1179
TaqI TCGA 3 cut(s) 684, 792, 1413
TasI AATT 4 cut(s) 146, 328, 374, 1130
TatI WGTACW 2 cut(s) 979, 1329
TauI GCSGC 1 cut(s) 56
TfiI GAWTC 4 cut(s) 479, 1208, 1314, 1433
Tru1I TTAA 6 cut(s) 60, 377, 504, 530, 611, 884
Tru9I TTAA 6 cut(s) 60, 377, 504, 530, 611, 884
TscAI CASTG 1 cut(s) 1023
TseI GCWGC 2 cut(s) 88, 554
TspDTI ATGAA 2 cut(s) 902, 986
TspGWI ACGGA 1 cut(s) 491
TspRI CASTG 1 cut(s) 1023
Van91I CCANNNNNTGG 1 cut(s) 671
VpaK11BI GGWCC 1 cut(s) 188
XapI RAATTY 1 cut(s) 1130
XbaI TCTAGA 1 cut(s) 565
XcmI CCANNNNNNNNNTGG 1 cut(s) 672
XmiI GTMKAC 1 cut(s) 700
XmnI GAANNNNTTC 1 cut(s) 837
XspI CTAG 3 cut(s) 297, 566, 1361
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.