AT3G26290

cytochrome P450

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
9632608 .. 9634822
2215 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G26290.2

Sequence Viewer

Length: 1503 bp
ATGGATAGCATTTGGATTCTATCACTTCTCTTCTTCATCATCTTTCTTCTTCTGGCCGCCTTCAAACGCAAAAATCATGGGAAACATCGACGAATACCATCTCCTCCTGGTTTTCCAATCATCGGAAACTTACATCAGCTCGGAGAATTACAACATCAGTCTCTATGGAAGCTCTCAAAGAAGTATGGCCCTGTGATGCTTTTGAAGCTTGGAAAAGTCCCCACACTCATACTTTCTTCATCAGAAACAGCAAAACAAGCTCTAAGAGACTATGATCTCCATTGTTGTAGCCGTCCTTCCTTAGCAGGAGGAAGAGAGCTCTCTTACAACAATCTAGATATGTCTTCATCTCCTTATAATGAATATTGGAAGGAACTAAGGAAGCTCTGCAGTCAAGAACTCTTTAGTGCTAATAAAATTCAATCGATTCAACCTATTAAGGACGAGGAGGTCAAGAAAGTTATCGATTCAATCGCGGAATCATCTTCTCTAAAGAATCCGGTTAACTTGAGCAAGACGTTTCTTGCTTTAACTACAAGTGTAGTATGCAAGGCAGCATTTGGTGTGAGTTTTGAGGGAAGTGTGCTCAACAGTGATAGATTCAATAAGTTAGTCCGAGATACTTTCGAGATGTTGGGAAGCTTCTCTGCCTCAGATTTTATTCCGTATGTCGGATGGATCATCGATAAGTTCAATGGTTTACAAGGGTGGAGAAAGAAAAGCTTTCGAGATCTTGATGCGTTCTATGAACAAATTTTTGATCTGCATAAGGAAGAGAAGGAAGTAGGAAGTGAAGATTTAGTGGATGTGCTCTTGAGGTTGGAGAAAGAAGAAATTGTTGTTGGAAATGGCAAGCTCACAAGAAATCATATCAAAGCAATTTTGATGAACATTCTTTTAGGAGGAATCGATACTTCTGCAATAACAATGACATGGGCAATGGCAGAACTTGCTAAAAACCCTAGAGTGATGAAGAAAGTTCAAGCAGAAATCAGAAACCAAATCAAGAACAAAGAAAGAATCAGCTTTGATGACACTGATAAGCTCGAGTACTTGAAAATGGTGATCAAAGAAACATGGAGGTTACATCCTCCAACACCTCTTCTCCTCCCAAGAGATGTAATCACTGAATTTGAGATCAATGGCTACACGATTCCTGCCAAAACACGGCTTCATGTGAATGTTTGGGCTATCGGGCGTGATCCTGATACATGGAAAGATCCAGAAATGTTTCTCCCCGAAAGGTTTAATGATAGTAACATTGATGCAAAAGGACAGAACTTTGAGTTGTTGTCGTTTGGGAGTGGTAGGAGAATTTGTCCTGGACTGTACATGGGAACAACAATGGTGGAGTTTGGCCTAGCTAATATGTTGTATCATTTTGATTGGAAGTTACCAGAAGGCATGGTAGTCGAAGATATCGATATGGAAGAAGCTCCTGGACTTACTGTGAGCAAAAAAAGTGAGCTTGTACTTGTTCCAGTGAAGTATTTAGACCATTGA

Protein Analysis

500

Amino Acids

57.08

Weight (kDa)

7.64

Isoelectric Point (pI)

39.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 46 - 500 4.3e-100 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000354)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13080 AT1G13080 AT1G13090 AT1G13090 AT1G13100 AT1G13110 AT2G02580 AT2G24180 AT3G26150 AT3G26160 AT3G26170 AT3G26180 AT3G26180 AT3G26190 AT3G26200 AT3G26210 AT3G26290 AT3G26290 AT3G26300 AT3G26310 AT3G26320 AT3G26330 AT3G26830 AT3G44250 AT3G53280 AT3G53290 AT3G53300 AT3G53305 AT5G25120 AT5G25130 AT5G25140 AT5G25180 AT5G35715 AT5G57260
fragaria_vesca FvH4_4g25390 FvH4_4g25390 FvH4_4g25390
malus_domestica MD13G1103500.v1.1 MD13G1103800.v1.1 MD13G1104100.v1.1 MD16G1103600.v1.1 MD16G1104000.v1.1 MD16G1104200.v1.1 MD16G1104300.v1.1
prunus_persica Prupe.1G170800_v2.0.a1 Prupe.1G242300_v2.0.a1 Prupe.1G242400_v2.0.a1
pyrus_communis pycom13g09040 pycom16g08850 pycom16g08860
rosa_chinensis RchiOBHm_Chr4g0419321 RchiOBHm_Chr4g0419411 RchiOBHm_Chr4g0419461 RchiOBHm_Chr4g0419481 RchiOBHm_Chr4g0419491 RchiOBHm_Chr4g0419571 RchiOBHm_Chr4g0432681 RchiOBHm_Chr4g0432701 RchiOBHm_Chr5g0025811
rosa_laevigata RLG00000003494 RLG00000006819 RLG00000006820 RLG00000006821 RLG00000006823 RLG00000007814 RLG00000007815 RLG00000032878
rosa_multiflora Rmu_co8315439.1_g000001 Rmu_sc0000455.1_g000013 Rmu_sc0000455.1_g000035 Rmu_sc0000455.1_g000058 Rmu_sc0000675.1_g000043 Rmu_sc0001912.1_g000035 Rmu_sc0002401.1_g000014 Rmu_sc0004932.1_g000013 Rmu_sc0008245.1_g000007 Rmu_sc0009481.1_g000005 Rmu_ssc0000467.1_g000029
rosa_roxburghii Rroxscaffold_1G00053390 Rroxscaffold_1G00054350 Rroxscaffold_4G00324380 Rroxscaffold_5G00362300 Rroxscaffold_5G00362360 Rroxscaffold_5G00374140 Rroxscaffold_5G00374160
rosa_rugosa Rorug04G0158300 Rorug04G0261600 Rorug04G0261700 Rorug04G0261800
rosa_samantha Rh4AG220300 Rh4AG316100 Rh4BG221600 Rh4BG222000 Rh4BG222100 Rh4BG222200 Rh4BG324100 Rh4CG233000 Rh4CG233100 Rh4CG233200 Rh4CG233900 Rh4CG339100 Rh4DG319500
rosa_wichuraiana Rw4G018840 Rw4G018880 Rw4G018900 Rw4G018930 Rw4G027500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 357
AasI GACNNNNNNGTC 1 cut(s) 449
AccII CGCG 1 cut(s) 476
AciI CCGC 2 cut(s) 57, 476
AclWI GGATC 3 cut(s) 686, 1196, 1214
AcoI YGGCCR 1 cut(s) 54
AcsI RAATTY 4 cut(s) 417, 753, 1130, 1314
AfaI GTAC 3 cut(s) 1052, 1331, 1473
AfiI CCNNNNNNNGG 3 cut(s) 122, 671, 1167
AgsI TTSAA 9 cut(s) 64, 205, 422, 431, 471, 604, 694, 983, 1057
AjnI CCWGG 3 cut(s) 106, 1321, 1438
AjuI GAANNNNNNNTTGG 2 cut(s) 825, 857
Alw21I GWGCWC 3 cut(s) 321, 588, 813
Alw26I GTCTC 2 cut(s) 165, 261
AlwI GGATC 3 cut(s) 686, 1196, 1214
Ama87I CYCGRG 1 cut(s) 1046
AoxI GGCC 3 cut(s) 54, 187, 1357
ApeKI GCWGC 1 cut(s) 554
ApoI RAATTY 4 cut(s) 417, 753, 1130, 1314
Asp700I GAANNNNTTC 1 cut(s) 1230
AspS9I GGNCC 1 cut(s) 188
AsuHPI GGTGA 1 cut(s) 1075
AvaI CYCGRG 1 cut(s) 1046
BanII GRGCYC 1 cut(s) 321
BarI GAAGNNNNNNTAC 2 cut(s) 280, 312
BbsI GAAGAC 1 cut(s) 336
Bbv12I GWGCWC 3 cut(s) 321, 588, 813
BbvI GCAGC 1 cut(s) 566
BccI CCATC 2 cut(s) 106, 669
BceAI ACGGC 2 cut(s) 276, 1184
BcgI CGANNNNNNTGC 4 cut(s) 899, 933, 1393, 1427
BciT130I CCWGG 3 cut(s) 108, 1323, 1440
BclI TGATCA 1 cut(s) 1065
BcoDI GTCTC 2 cut(s) 165, 261
BfaI CTAG 3 cut(s) 335, 963, 1361
BfmI CTRYAG 1 cut(s) 388
BglII AGATCT 1 cut(s) 730
BisI GCNGC 2 cut(s) 57, 555
BlsI GCNGC 2 cut(s) 58, 556
BmcAI AGTACT 1 cut(s) 1052
Bme1390I CCNGG 3 cut(s) 108, 1323, 1440
BmeT110I CYCGRG 1 cut(s) 1046
BmgT120I GGNCC 1 cut(s) 188
BmrFI CCNGG 3 cut(s) 108, 1323, 1440
BmsI GCATC 3 cut(s) 186, 727, 1255
BpiI GAAGAC 1 cut(s) 336
Bpu10I CCTNAGC 1 cut(s) 301
BpuEI CTTGAG 2 cut(s) 529, 835
Bsa29I ATCGAT 5 cut(s) 425, 465, 684, 909, 1422
BsaWI WCCGGW 1 cut(s) 499
BsaXI ACNNNNNCTCC 4 cut(s) 1089, 1119, 1303, 1333
Bsc4I CCNNNNNNNGG 3 cut(s) 122, 671, 1167
Bse1I ACTGG 1 cut(s) 1481
Bse3DI GCAATG 1 cut(s) 945
BseBI CCWGG 3 cut(s) 108, 1323, 1440
BseCI ATCGAT 5 cut(s) 425, 465, 684, 909, 1422
BseGI GGATG 3 cut(s) 680, 811, 1087
BseLI CCNNNNNNNGG 3 cut(s) 122, 671, 1167
BseMI GCAATG 1 cut(s) 945
BseMII CTCAG 1 cut(s) 666
BseNI ACTGG 1 cut(s) 1481
BseRI GAGGAG 3 cut(s) 93, 461, 1097
BseXI GCAGC 1 cut(s) 566
Bsh1236I CGCG 1 cut(s) 476
BshFI GGCC 3 cut(s) 56, 189, 1359
BshVI ATCGAT 5 cut(s) 425, 465, 684, 909, 1422
BsiHKAI GWGCWC 3 cut(s) 321, 588, 813
BsiHKCI CYCGRG 1 cut(s) 1046
BsiSI CCGG 1 cut(s) 500
BslFI GGGAC 1 cut(s) 203
BslI CCNNNNNNNGG 3 cut(s) 122, 671, 1167
BsmAI GTCTC 2 cut(s) 165, 261
BsmFI GGGAC 1 cut(s) 203
BsnI GGCC 3 cut(s) 56, 189, 1359
BsoBI CYCGRG 1 cut(s) 1046
Bsp1286I GDGCHC 3 cut(s) 321, 588, 813
Bsp1407I TGTACA 1 cut(s) 1329
Bsp143I GATC 8 cut(s) 274, 678, 730, 760, 1065, 1137, 1201, 1219
BspACI CCGC 2 cut(s) 57, 476
BspANI GGCC 3 cut(s) 56, 189, 1359
BspCNI CTCAG 1 cut(s) 665
BspDI ATCGAT 5 cut(s) 425, 465, 684, 909, 1422
BspFNI CGCG 1 cut(s) 476
BspMAI CTGCAG 1 cut(s) 392
BspPI GGATC 3 cut(s) 686, 1196, 1214
BsrDI GCAATG 1 cut(s) 945
BsrGI TGTACA 1 cut(s) 1329
BsrI ACTGG 1 cut(s) 1481
BssMI GATC 8 cut(s) 274, 678, 730, 760, 1065, 1137, 1201, 1219
Bst2UI CCWGG 3 cut(s) 108, 1323, 1440
Bst4CI ACNGT 3 cut(s) 593, 1329, 1450
Bst6I CTCTTC 4 cut(s) 35, 307, 768, 1107
BstAPI GCANNNNNTGC 1 cut(s) 950
BstAUI TGTACA 1 cut(s) 1329
BstC8I GCNNGC 1 cut(s) 854
BstDEI CTNAG 4 cut(s) 263, 301, 377, 652
BstF5I GGATG 3 cut(s) 680, 811, 1087
BstFNI CGCG 1 cut(s) 476
BstKTI GATC 8 cut(s) 277, 681, 733, 763, 1068, 1140, 1204, 1222
BstMAI GTCTC 2 cut(s) 165, 261
BstMBI GATC 8 cut(s) 274, 678, 730, 760, 1065, 1137, 1201, 1219
BstMWI GCNNNNNNNGC 3 cut(s) 205, 257, 950
BstNI CCWGG 3 cut(s) 108, 1323, 1440
BstSCI CCNGG 3 cut(s) 106, 1321, 1438
BstSFI CTRYAG 1 cut(s) 388
BstUI CGCG 1 cut(s) 476
BstV1I GCAGC 1 cut(s) 566
BstV2I GAAGAC 1 cut(s) 336
BstX2I RGATCY 2 cut(s) 730, 1219
BstYI RGATCY 2 cut(s) 730, 1219
Bsu15I ATCGAT 5 cut(s) 425, 465, 684, 909, 1422
BsuRI GGCC 3 cut(s) 56, 189, 1359
BsuTUI ATCGAT 5 cut(s) 425, 465, 684, 909, 1422
BtsCI GGATG 3 cut(s) 680, 811, 1087
BtsIMutI CAGTG 4 cut(s) 598, 1035, 1125, 1488
Cac8I GCNNGC 1 cut(s) 854
Cfr13I GGNCC 1 cut(s) 188
ClaI ATCGAT 5 cut(s) 425, 465, 684, 909, 1422
Csp6I GTAC 3 cut(s) 1051, 1330, 1472
CspCI CAANNNNNGTGG 2 cut(s) 1329, 1364
CviAII CATG 7 cut(s) 77, 933, 1077, 1175, 1212, 1333, 1405
CviQI GTAC 3 cut(s) 1051, 1330, 1472
DdeI CTNAG 4 cut(s) 263, 301, 377, 652
DpnI GATC 8 cut(s) 276, 680, 732, 762, 1067, 1139, 1203, 1221
DpnII GATC 8 cut(s) 274, 678, 730, 760, 1065, 1137, 1201, 1219
DrdI GACNNNNNNGTC 1 cut(s) 449
DseDI GACNNNNNNGTC 1 cut(s) 449
EaeI YGGCCR 1 cut(s) 54
Eam1104I CTCTTC 4 cut(s) 35, 307, 768, 1107
EarI CTCTTC 4 cut(s) 35, 307, 768, 1107
Ecl136II GAGCTC 1 cut(s) 319
Eco24I GRGCYC 1 cut(s) 321
Eco32I GATATC 1 cut(s) 1420
Eco53kI GAGCTC 1 cut(s) 319
Eco88I CYCGRG 1 cut(s) 1046
EcoICRI GAGCTC 1 cut(s) 319
EcoRII CCWGG 3 cut(s) 106, 1321, 1438
EcoRV GATATC 1 cut(s) 1420
EcoT38I GRGCYC 1 cut(s) 321
FaeI CATG 7 cut(s) 80, 936, 1080, 1178, 1215, 1336, 1408
FalI AAGNNNNNCTT 2 cut(s) 707, 739
FaqI GGGAC 1 cut(s) 203
FatI CATG 7 cut(s) 76, 932, 1076, 1174, 1211, 1332, 1404
FbaI TGATCA 1 cut(s) 1065
Fnu4HI GCNGC 2 cut(s) 57, 555
FokI GGATG 3 cut(s) 687, 818, 1074
FriOI GRGCYC 1 cut(s) 321
Fsp4HI GCNGC 2 cut(s) 57, 555
FspBI CTAG 3 cut(s) 335, 963, 1361
GluI GCNGC 2 cut(s) 57, 555
HaeIII GGCC 3 cut(s) 56, 189, 1359
HapII CCGG 1 cut(s) 500
Hin1II CATG 7 cut(s) 80, 936, 1080, 1178, 1215, 1336, 1408
HincII GTYRAC 1 cut(s) 505
HindII GTYRAC 1 cut(s) 505
HindIII AAGCTT 3 cut(s) 206, 640, 721
HinfI GANTC 9 cut(s) 16, 427, 467, 479, 496, 600, 906, 1020, 1153
HpaI GTTAAC 1 cut(s) 505
HpaII CCGG 1 cut(s) 500
HphI GGTGA 1 cut(s) 1075
Hpy166II GTNNAC 2 cut(s) 505, 701
Hpy188I TCNGA 7 cut(s) 125, 143, 244, 617, 655, 674, 995
Hpy8I GTNNAC 2 cut(s) 505, 701
Hpy99I CGWCG 1 cut(s) 93
HpyAV CCTTC 5 cut(s) 70, 306, 364, 772, 1394
HpyCH4III ACNGT 3 cut(s) 593, 1329, 1450
HpyCH4IV ACGT 1 cut(s) 518
HpyCH4V TGCA 5 cut(s) 390, 549, 766, 920, 1268
HpyF10VI GCNNNNNNNGC 3 cut(s) 205, 257, 950
HpyF3I CTNAG 4 cut(s) 263, 301, 377, 652
HpySE526I ACGT 1 cut(s) 518
Hsp92II CATG 7 cut(s) 80, 936, 1080, 1178, 1215, 1336, 1408
Ksp22I TGATCA 1 cut(s) 1065
KspAI GTTAAC 1 cut(s) 505
Kzo9I GATC 8 cut(s) 274, 678, 730, 760, 1065, 1137, 1201, 1219
LmnI GCTCC 1 cut(s) 1441
Lsp1109I GCAGC 1 cut(s) 566
LweI GCATC 3 cut(s) 186, 727, 1255
MaeI CTAG 3 cut(s) 335, 963, 1361
MaeII ACGT 1 cut(s) 518
MaeIII GTNAC 3 cut(s) 1083, 1256, 1392
MalI GATC 8 cut(s) 276, 680, 732, 762, 1067, 1139, 1203, 1221
MboI GATC 8 cut(s) 274, 678, 730, 760, 1065, 1137, 1201, 1219
MflI RGATCY 2 cut(s) 730, 1219
MhlI GDGCHC 3 cut(s) 321, 588, 813
MluCI AATT 7 cut(s) 146, 417, 753, 834, 879, 1130, 1314
MmeI TCCRAC 4 cut(s) 652, 801, 823, 1118
MroXI GAANNNNTTC 1 cut(s) 1230
MseI TTAA 4 cut(s) 438, 504, 530, 1248
MslI CAYNNNNRTG 1 cut(s) 1179
MspI CCGG 1 cut(s) 500
MspR9I CCNGG 3 cut(s) 108, 1323, 1440
MvaI CCWGG 3 cut(s) 108, 1323, 1440
MvnI CGCG 1 cut(s) 476
MwoI GCNNNNNNNGC 3 cut(s) 205, 257, 950
NdeII GATC 8 cut(s) 274, 678, 730, 760, 1065, 1137, 1201, 1219
NlaIII CATG 7 cut(s) 80, 936, 1080, 1178, 1215, 1336, 1408
PaeR7I CTCGAG 1 cut(s) 1046
PcsI WCGNNNNNNNCGW 1 cut(s) 1419
PdmI GAANNNNTTC 1 cut(s) 1230
PfeI GAWTC 9 cut(s) 16, 427, 467, 479, 496, 600, 906, 1020, 1153
PfoI TCCNGGA 2 cut(s) 1321, 1438
PkrI GCNGC 2 cut(s) 58, 556
PsiI TTATAA 1 cut(s) 357
Psp124BI GAGCTC 1 cut(s) 321
Psp6I CCWGG 3 cut(s) 106, 1321, 1438
PspGI CCWGG 3 cut(s) 106, 1321, 1438
PspPI GGNCC 1 cut(s) 188
PspXI VCTCGAGB 1 cut(s) 1046
PstI CTGCAG 1 cut(s) 392
PsuI RGATCY 2 cut(s) 730, 1219
RsaI GTAC 3 cut(s) 1052, 1331, 1473
RsaNI GTAC 3 cut(s) 1051, 1330, 1472
RseI CAYNNNNRTG 1 cut(s) 1179
SacI GAGCTC 1 cut(s) 321
SaqAI TTAA 4 cut(s) 438, 504, 530, 1248
SatI GCNGC 2 cut(s) 57, 555
Sau3AI GATC 8 cut(s) 274, 678, 730, 760, 1065, 1137, 1201, 1219
Sau96I GGNCC 1 cut(s) 188
ScaI AGTACT 1 cut(s) 1052
ScrFI CCNGG 3 cut(s) 108, 1323, 1440
SduI GDGCHC 3 cut(s) 321, 588, 813
SfaNI GCATC 3 cut(s) 186, 727, 1255
SfcI CTRYAG 1 cut(s) 388
Sfr274I CTCGAG 1 cut(s) 1046
SlaI CTCGAG 1 cut(s) 1046
SmiMI CAYNNNNRTG 1 cut(s) 1179
SmlI CTYRAG 3 cut(s) 508, 814, 1046
SmoI CTYRAG 3 cut(s) 508, 814, 1046
Sse9I AATT 7 cut(s) 146, 417, 753, 834, 879, 1130, 1314
SsiI CCGC 2 cut(s) 57, 476
SspI AATATT 1 cut(s) 365
SspMI CTAG 3 cut(s) 335, 963, 1361
SstI GAGCTC 1 cut(s) 321
StyD4I CCNGG 3 cut(s) 106, 1321, 1438
TaaI ACNGT 3 cut(s) 593, 1329, 1450
TaiI ACGT 1 cut(s) 521
TasI AATT 7 cut(s) 146, 417, 753, 834, 879, 1130, 1314
TatI WGTACW 3 cut(s) 1050, 1329, 1471
TauI GCSGC 1 cut(s) 59
TfiI GAWTC 9 cut(s) 16, 427, 467, 479, 496, 600, 906, 1020, 1153
Tru1I TTAA 4 cut(s) 438, 504, 530, 1248
Tru9I TTAA 4 cut(s) 438, 504, 530, 1248
TscAI CASTG 4 cut(s) 598, 1042, 1132, 1488
TseI GCWGC 1 cut(s) 554
TspDTI ATGAA 8 cut(s) 25, 228, 336, 375, 762, 902, 986, 1163
TspGWI ACGGA 1 cut(s) 654
TspRI CASTG 4 cut(s) 598, 1042, 1132, 1488
XapI RAATTY 4 cut(s) 417, 753, 1130, 1314
XbaI TCTAGA 1 cut(s) 334
XhoI CTCGAG 1 cut(s) 1046
XmnI GAANNNNTTC 1 cut(s) 1230
XspI CTAG 3 cut(s) 335, 963, 1361
ZrmI AGTACT 1 cut(s) 1052
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.