Rorug04G0261800

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000354
Physical Location & Seq
Reverse (-)
43383848 .. 43390356
6509 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0261800.1

Sequence Viewer

Length: 2460 bp
ATGGATAAGAGTTGGATTGATGTACAACAAACGGACTGGCATAGATATGAAGATGGAGTTGATAGATTTTTGGATTTCGCATTCGCCAATAGCATCGATAAGACAAGGATTTATTGTCCTTGTAAGCTATGTCGCAATCGCTATTTTAAGACTAGGGAGGAAGCGAGCGAGGATATAAAGGTAGATGGATTTTGGGAAAAATATAGAATATGGGATAAACATGGTGAATCTAGGCCTGCGACTGTATACCAAGGTACTGGGGTTAACTCTAATGTGGCCATCAATGATGATATGTTTGGCATGATTAATGAGGCAATTGGGGCTCCCACCGCCAATTCTGGTTTAGGTGATGATTGTCCTATAGAAAGTGAAAATGTTGAGGGACCAAATGACGAATCTGCAAAATTTCTTAAATTGCTCCAAGATGCAGAGTGTCCTTTATATCCTGGTTGCGAACAATTTACGAAATTGTCATTCATTGTTCGATTGTTACACTTGAAAGTTCTTAGTGGATGGACAAACAAGTCTTTTGATTTACTACTGGATCTTTTAAAATCTTCTTATCCTGATGGAGTCATGACAGAACGGCGAATTCGTAATAGGGTATTTTCTGACGAAATAATTGCTTTGGCTAGAGGCCCTCATGAAGATGGTTTGAGGTTTAAGGGATATTTTATCAATGGCTTTCGGTTTCGTACCAAAAGTAGAGATAAAAAAAAATCCACTCAAAATTCTGGTATTATGATGGATGCCACTACAGGAGACAACAATCGTCAACCGATTGAGGAAAGGTTCTATGGGGTATTAACTGATGTGATTCAAATCCGCTATACCAATCACTTAAAGTTTGTCTTATTTAAGGGTGATTGGATTAATAATCGAATGGGCCTAAAAAAAGATGAGTTTAAATTCACACTGGTGAATTTTAATCATTTATTATACAAAGACAATGTAATAGAAGATGAGCCTTTTATTTTGGCAGAACAGGCAAGGCAGGTTTGTTATGTGCAAGACCCGTCGGATCCCAATTGGCATGTTGTTCTTCACATGACAGTTAGAGATTTGTTTGATATGTACTCAAAGGATTCTTCTCGTCGTCCAACAGTAGTGCCTCAAGTTGAGTTATTTATGGCGCCTAAGAGAACTATGGCGCCTAAGAGAACAAAAGGTATGTCTATGGAGGAGTTGATTCCACCTTCTCCTGTGAGGCCAAGAAAGGGTCAGTTGCAAGCACGATCAGCTAAACGTGTGTCTGCTTCTGGTCAATATAAACGGCCTCGACCCAATACATCTCGAAATCAACAAGAAGCTCAATTGGTGACACCTACAACTACTCAATCAGAGACACATCAGCATCATGTGTCTGAAGCTAGTCTAGAGGAGCCTGTTACAACCCAATTACACGAGTCAGGTCAAATTAATGAAAGAGCTAAGAAAGGTAGGGGTGCTGCTTGTGGTATGCCTGAATGGGGAACTGGAAAAATAGCGCATATTGAATTTGATGCTAATTGGATGCCTATCAGTGAAAATGCGAAGGGGTTTAGTTCACAACTTGGAATCTTGGCCCGAGATGGACAGAAGGTTCCTCTAACCTTTACTTCATGGACTGCCATGCCAGATGATGTTTTGGATGACATTTGGAAAGATGTCAAGGATAACACGGATGTTCCGGATGAATATAAACATCATTGCTTAAAGGTTGTTGGTAGTAGATGGAGGGATTGGAAGTGTCGAGTCAAGACACAATGGTATGATAAATATGAAATTGATGAGCAGCGATTAGCATTCACTCCTAATCAGGTTGTTGCAGACCAATGGAAAATATTAGTAAAGTATTGGGGTCTTCCGCATGTACAAGAAATGTGTGAGACCAATAAATCTAGCCGTGCACAAGGAGGAGGTGTCCCTCATAGGACTGGTCGAAAATCGTTTGCTAGACTACGAAAAGAGATGATGGAGAATGGAGAGAAAACAGATCGTGTGAGCATGTTTGTCAAAACAAGAGCTATGAAAACAAGGAATGATGATGGTCAGCCAATTGAAGTACATGATGAGGAGGCTACTGCCGTCATTAGTCAATTCAATGAATATTTGAGGGACATGCCAGAAGATGAACAAAATGATACTTTTCGTGAAGAGGTATTTACTACAGTGATGGGAGAAGATACACATGGGCGTGTTCGCATGTATGGAACAGGTGTAACTCCATCTCAAGTGTTTGGTAACTCAAAAACTTCTGAGACTATTGAAAAGAAGACAATTGAGGAAATGGAAAAGAAATACCAAACAAAGCTAGATGATCTCAAAGAAAGCCATGAATCTCAATTGGGAGACATGAAATTAAAGTACGAAGATGTGTCGAATCGTCTCAATCTTTTGATGGCACATGTTGGTATCCAAGTAAACCAAAGTGGCAGTACAAGTGAACAGGTTGGAGAAATATCTAGGTTATTATGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

819

Amino Acids

94.36

Weight (kDa)

6.44

Isoelectric Point (pI)

39.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transpos_assoc PF13963 3 - 76 3.3e-18 Transposase-associated domain
DUF4216 PF13952 273 - 347 1.7e-20 Domain of unknown function (DUF4216)
Transposase_24 PF03004 603 - 736 1.2e-24 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000354)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13080 AT1G13080 AT1G13090 AT1G13090 AT1G13100 AT1G13110 AT2G02580 AT2G24180 AT3G26150 AT3G26160 AT3G26170 AT3G26180 AT3G26180 AT3G26190 AT3G26200 AT3G26210 AT3G26290 AT3G26290 AT3G26300 AT3G26310 AT3G26320 AT3G26330 AT3G26830 AT3G44250 AT3G53280 AT3G53290 AT3G53300 AT3G53305 AT5G25120 AT5G25130 AT5G25140 AT5G25180 AT5G35715 AT5G57260
fragaria_vesca FvH4_4g25390 FvH4_4g25390 FvH4_4g25390
malus_domestica MD13G1103500.v1.1 MD13G1103800.v1.1 MD13G1104100.v1.1 MD16G1103600.v1.1 MD16G1104000.v1.1 MD16G1104200.v1.1 MD16G1104300.v1.1
prunus_persica Prupe.1G170800_v2.0.a1 Prupe.1G242300_v2.0.a1 Prupe.1G242400_v2.0.a1
pyrus_communis pycom13g09040 pycom16g08850 pycom16g08860
rosa_chinensis RchiOBHm_Chr4g0419321 RchiOBHm_Chr4g0419411 RchiOBHm_Chr4g0419461 RchiOBHm_Chr4g0419481 RchiOBHm_Chr4g0419491 RchiOBHm_Chr4g0419571 RchiOBHm_Chr4g0432681 RchiOBHm_Chr4g0432701 RchiOBHm_Chr5g0025811
rosa_laevigata RLG00000003494 RLG00000006819 RLG00000006820 RLG00000006821 RLG00000006823 RLG00000007814 RLG00000007815 RLG00000032878
rosa_multiflora Rmu_co8315439.1_g000001 Rmu_sc0000455.1_g000013 Rmu_sc0000455.1_g000035 Rmu_sc0000455.1_g000058 Rmu_sc0000675.1_g000043 Rmu_sc0001912.1_g000035 Rmu_sc0002401.1_g000014 Rmu_sc0004932.1_g000013 Rmu_sc0008245.1_g000007 Rmu_sc0009481.1_g000005 Rmu_ssc0000467.1_g000029
rosa_roxburghii Rroxscaffold_1G00053390 Rroxscaffold_1G00054350 Rroxscaffold_4G00324380 Rroxscaffold_5G00362300 Rroxscaffold_5G00362360 Rroxscaffold_5G00374140 Rroxscaffold_5G00374160
rosa_rugosa Rorug04G0158300 Rorug04G0261600 Rorug04G0261700 Rorug04G0261800
rosa_samantha Rh4AG220300 Rh4AG316100 Rh4BG221600 Rh4BG222000 Rh4BG222100 Rh4BG222200 Rh4BG324100 Rh4CG233000 Rh4CG233100 Rh4CG233200 Rh4CG233900 Rh4CG339100 Rh4DG319500
rosa_wichuraiana Rw4G018840 Rw4G018880 Rw4G018900 Rw4G018930 Rw4G027500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 523
Acc36I ACCTGC 1 cut(s) 985
AccB1I GGYRCC 2 cut(s) 1132, 1150
AccI GTMKAC 1 cut(s) 246
AccIII TCCGGA 1 cut(s) 1669
AciI CCGC 3 cut(s) 330, 826, 1847
AclWI GGATC 3 cut(s) 552, 1016, 1029
AcoI YGGCCR 1 cut(s) 276
AcsI RAATTY 6 cut(s) 404, 591, 730, 908, 922, 1496
AcuI CTGAAG 1 cut(s) 1386
AcyI GRCGYC 2 cut(s) 1133, 1151
AfaI GTAC 8 cut(s) 24, 256, 697, 1076, 1854, 2046, 2348, 2419
AfiI CCNNNNNNNGG 2 cut(s) 1217, 1469
AflIII ACRYGT 2 cut(s) 1246, 2386
AgsI TTSAA 6 cut(s) 499, 821, 1496, 2042, 2083, 2249
AjnI CCWGG 1 cut(s) 445
AleI CACNNNNGTG 1 cut(s) 917
AloI GAACNNNNNNTCC 2 cut(s) 1566, 1598
AluBI AGCT 7 cut(s) 127, 1241, 1310, 1370, 1430, 2006, 2293
AluI AGCT 7 cut(s) 127, 1241, 1310, 1370, 1430, 2006, 2293
Alw21I GWGCWC 1 cut(s) 1891
Alw26I GTCTC 6 cut(s) 756, 1337, 1862, 2234, 2325, 2372
Alw44I GTGCAC 1 cut(s) 1887
AlwI GGATC 3 cut(s) 552, 1016, 1029
Ama87I CYCGRG 1 cut(s) 1566
Aor13HI TCCGGA 1 cut(s) 1669
AoxI GGCC 7 cut(s) 233, 276, 637, 886, 1208, 1274, 1563
ApaLI GTGCAC 1 cut(s) 1887
ApeKI GCWGC 2 cut(s) 1448, 1774
ApoI RAATTY 6 cut(s) 404, 591, 730, 908, 922, 1496
ArsI GACNNNNNNTTYG 2 cut(s) 1157, 1189
AseI ATTAAT 3 cut(s) 306, 873, 1419
AspLEI GCGC 3 cut(s) 1135, 1153, 1489
AspS9I GGNCC 4 cut(s) 383, 638, 886, 1564
AsuHPI GGTGA 5 cut(s) 236, 359, 875, 931, 1330
AvaI CYCGRG 1 cut(s) 1566
AvaII GGWCC 1 cut(s) 383
BaeGI GKGCMC 1 cut(s) 1891
BaeI ACNNNNGTAYC 2 cut(s) 246, 279
BalI TGGCCA 1 cut(s) 278
BamHI GGATCC 1 cut(s) 1021
BanI GGYRCC 2 cut(s) 1132, 1150
BanII GRGCYC 1 cut(s) 325
BauI CACGAG 1 cut(s) 1403
BbsI GAAGAC 2 cut(s) 1835, 2261
Bbv12I GWGCWC 1 cut(s) 1891
BbvI GCAGC 2 cut(s) 1435, 1786
BceAI ACGGC 4 cut(s) 602, 1289, 1869, 2051
BcgI CGANNNNNNTGC 2 cut(s) 605, 639
BciT130I CCWGG 1 cut(s) 447
BciVI GTATCC 1 cut(s) 2405
BcoDI GTCTC 6 cut(s) 756, 1337, 1862, 2234, 2325, 2372
BfaI CTAG 9 cut(s) 153, 231, 633, 1371, 1376, 1881, 1935, 2294, 2445
BfmI CTRYAG 3 cut(s) 360, 756, 2148
BfoI RGCGCY 2 cut(s) 1136, 1154
BfuAI ACCTGC 1 cut(s) 985
BfuI GTATCC 1 cut(s) 2405
BisI GCNGC 2 cut(s) 1449, 1775
BlsI GCNGC 2 cut(s) 1450, 1776
Bme1390I CCNGG 1 cut(s) 447
Bme18I GGWCC 1 cut(s) 383
BmeT110I CYCGRG 1 cut(s) 1566
BmgT120I GGNCC 4 cut(s) 383, 638, 886, 1564
BmiI GGNNCC 7 cut(s) 324, 384, 1023, 1134, 1152, 1383, 1584
BmrFI CCNGG 1 cut(s) 447
BmrI ACTGGG 1 cut(s) 267
BmsI GCATC 6 cut(s) 102, 415, 739, 1363, 1492, 1503
BmuI ACTGGG 1 cut(s) 267
BpiI GAAGAC 2 cut(s) 1835, 2261
BpuEI CTTGAG 2 cut(s) 1098, 2196
Bsa29I ATCGAT 1 cut(s) 96
BsaBI GATNNNNATC 2 cut(s) 821, 1517
BsaHI GRCGYC 2 cut(s) 1133, 1151
BsaI GGTCTC 1 cut(s) 1862
BsaJI CCNNGG 1 cut(s) 250
BsaWI WCCGGW 1 cut(s) 1669
BsaXI ACNNNNNCTCC 2 cut(s) 1887, 1917
Bsc4I CCNNNNNNNGG 2 cut(s) 1217, 1469
Bse1I ACTGG 6 cut(s) 41, 262, 546, 921, 1480, 1921
Bse3DI GCAATG 1 cut(s) 1687
Bse8I GATNNNNATC 2 cut(s) 821, 1517
BseAI TCCGGA 1 cut(s) 1669
BseBI CCWGG 1 cut(s) 447
BseCI ATCGAT 1 cut(s) 96
BseDI CCNNGG 1 cut(s) 250
BseGI GGATG 6 cut(s) 518, 754, 1518, 1636, 1669, 1678
BseJI GATNNNNATC 2 cut(s) 821, 1517
BseLI CCNNNNNNNGG 2 cut(s) 1217, 1469
BseMI GCAATG 1 cut(s) 1687
BseMII CTCAG 1 cut(s) 2229
BseNI ACTGG 6 cut(s) 41, 262, 546, 921, 1480, 1921
BseRI GAGGAG 4 cut(s) 1196, 1394, 1911, 2069
BseSI GKGCMC 1 cut(s) 1891
BseXI GCAGC 2 cut(s) 1435, 1786
BshFI GGCC 7 cut(s) 235, 278, 639, 888, 1210, 1276, 1565
BshNI GGYRCC 2 cut(s) 1132, 1150
BshVI ATCGAT 1 cut(s) 96
BsiHKAI GWGCWC 1 cut(s) 1891
BsiHKCI CYCGRG 1 cut(s) 1566
BsiSI CCGG 1 cut(s) 1670
BslFI GGGAC 3 cut(s) 396, 1889, 2111
BslI CCNNNNNNNGG 2 cut(s) 1217, 1469
BsmAI GTCTC 6 cut(s) 756, 1337, 1862, 2234, 2325, 2372
BsmBI CGTCTC 1 cut(s) 2372
BsmFI GGGAC 3 cut(s) 396, 1889, 2111
BsmI GAATGC 2 cut(s) 80, 1784
BsnI GGCC 7 cut(s) 235, 278, 639, 888, 1210, 1276, 1565
Bso31I GGTCTC 1 cut(s) 1862
BsoBI CYCGRG 1 cut(s) 1566
Bsp1286I GDGCHC 2 cut(s) 325, 1891
Bsp13I TCCGGA 1 cut(s) 1669
Bsp1407I TGTACA 2 cut(s) 22, 1852
Bsp143I GATC 5 cut(s) 544, 1021, 1235, 1975, 2299
BspACI CCGC 3 cut(s) 330, 826, 1847
BspANI GGCC 7 cut(s) 235, 278, 639, 888, 1210, 1276, 1565
BspCNI CTCAG 1 cut(s) 2230
BspDI ATCGAT 1 cut(s) 96
BspEI TCCGGA 1 cut(s) 1669
BspHI TCATGA 2 cut(s) 576, 643
BspLI GGNNCC 7 cut(s) 324, 384, 1023, 1134, 1152, 1383, 1584
BspMI ACCTGC 1 cut(s) 985
BspPI GGATC 3 cut(s) 552, 1016, 1029
BspT107I GGYRCC 2 cut(s) 1132, 1150
BspTNI GGTCTC 1 cut(s) 1862
BsrDI GCAATG 1 cut(s) 1687
BsrGI TGTACA 2 cut(s) 22, 1852
BsrI ACTGG 6 cut(s) 41, 262, 546, 921, 1480, 1921
BssECI CCNNGG 1 cut(s) 250
BssMI GATC 5 cut(s) 544, 1021, 1235, 1975, 2299
BssNAI GTATAC 1 cut(s) 247
BssNI GRCGYC 2 cut(s) 1133, 1151
BssSI CACGAG 1 cut(s) 1403
BssT1I CCWWGG 1 cut(s) 250
Bst1107I GTATAC 1 cut(s) 247
Bst2BI CACGAG 1 cut(s) 1403
Bst2UI CCWGG 1 cut(s) 447
Bst4CI ACNGT 4 cut(s) 244, 1054, 1105, 2152
Bst6I CTCTTC 1 cut(s) 2130
BstACI GRCGYC 2 cut(s) 1133, 1151
BstAUI TGTACA 2 cut(s) 22, 1852
BstC8I GCNNGC 3 cut(s) 166, 237, 1230
BstDEI CTNAG 5 cut(s) 506, 1137, 1155, 1431, 2238
BstF5I GGATG 6 cut(s) 518, 754, 1518, 1636, 1669, 1678
BstH2I RGCGCY 2 cut(s) 1136, 1154
BstHHI GCGC 3 cut(s) 1135, 1153, 1489
BstKTI GATC 5 cut(s) 547, 1024, 1238, 1978, 2302
BstMAI GTCTC 6 cut(s) 756, 1337, 1862, 2234, 2325, 2372
BstMBI GATC 5 cut(s) 544, 1021, 1235, 1975, 2299
BstMWI GCNNNNNNNGC 4 cut(s) 320, 329, 986, 1238
BstNI CCWGG 1 cut(s) 447
BstNSI RCATGY 6 cut(s) 1037, 1853, 1990, 2104, 2188, 2390
BstSCI CCNGG 1 cut(s) 445
BstSFI CTRYAG 3 cut(s) 360, 756, 2148
BstSLI GKGCMC 1 cut(s) 1891
BstV1I GCAGC 2 cut(s) 1435, 1786
BstV2I GAAGAC 2 cut(s) 1835, 2261
BstX2I RGATCY 2 cut(s) 544, 1021
BstXI CCANNNNNNTGG 1 cut(s) 257
BstYI RGATCY 2 cut(s) 544, 1021
BstZ17I GTATAC 1 cut(s) 247
Bsu15I ATCGAT 1 cut(s) 96
BsuI GTATCC 1 cut(s) 2405
BsuRI GGCC 7 cut(s) 235, 278, 639, 888, 1210, 1276, 1565
BsuTUI ATCGAT 1 cut(s) 96
BtsCI GGATG 6 cut(s) 518, 754, 1518, 1636, 1669, 1678
BtsIMutI CAGTG 3 cut(s) 914, 1528, 2157
BveI ACCTGC 1 cut(s) 985
Cac8I GCNNGC 3 cut(s) 166, 237, 1230
CciI TCATGA 2 cut(s) 576, 643
CfoI GCGC 3 cut(s) 1135, 1153, 1489
Cfr13I GGNCC 4 cut(s) 383, 638, 886, 1564
ClaI ATCGAT 1 cut(s) 96
Csp6I GTAC 8 cut(s) 23, 255, 696, 1075, 1853, 2045, 2347, 2418
CviQI GTAC 8 cut(s) 23, 255, 696, 1075, 1853, 2045, 2347, 2418
DdeI CTNAG 5 cut(s) 506, 1137, 1155, 1431, 2238
DinI GGCGCC 2 cut(s) 1134, 1152
DpnI GATC 5 cut(s) 546, 1023, 1237, 1977, 2301
DpnII GATC 5 cut(s) 544, 1021, 1235, 1975, 2299
DraI TTTAAA 2 cut(s) 552, 907
DrdI GACNNNNNNGTC 1 cut(s) 523
DseDI GACNNNNNNGTC 1 cut(s) 523
EaeI YGGCCR 1 cut(s) 276
Eam1104I CTCTTC 1 cut(s) 2130
EarI CTCTTC 1 cut(s) 2130
Eco130I CCWWGG 1 cut(s) 250
Eco147I AGGCCT 1 cut(s) 235
Eco24I GRGCYC 1 cut(s) 325
Eco31I GGTCTC 1 cut(s) 1862
Eco47I GGWCC 1 cut(s) 383
Eco57I CTGAAG 1 cut(s) 1386
Eco88I CYCGRG 1 cut(s) 1566
EcoO109I RGGNCCY 1 cut(s) 638
EcoRI GAATTC 1 cut(s) 591
EcoRII CCWGG 1 cut(s) 445
EcoT14I CCWWGG 1 cut(s) 250
EcoT38I GRGCYC 1 cut(s) 325
EgeI GGCGCC 2 cut(s) 1134, 1152
EheI GGCGCC 2 cut(s) 1134, 1152
ErhI CCWWGG 1 cut(s) 250
Esp3I CGTCTC 1 cut(s) 2372
FalI AAGNNNNNCTT 2 cut(s) 836, 868
FaqI GGGAC 3 cut(s) 396, 1889, 2111
FblI GTMKAC 1 cut(s) 246
Fnu4HI GCNGC 2 cut(s) 1449, 1775
FokI GGATG 6 cut(s) 525, 761, 1525, 1643, 1676, 1685
FriOI GRGCYC 1 cut(s) 325
Fsp4HI GCNGC 2 cut(s) 1449, 1775
FspBI CTAG 9 cut(s) 153, 231, 633, 1371, 1376, 1881, 1935, 2294, 2445
GlaI GCGC 3 cut(s) 1134, 1152, 1488
GluI GCNGC 2 cut(s) 1449, 1775
HaeII RGCGCY 2 cut(s) 1136, 1154
HaeIII GGCC 7 cut(s) 235, 278, 639, 888, 1210, 1276, 1565
HapII CCGG 1 cut(s) 1670
HhaI GCGC 3 cut(s) 1135, 1153, 1489
Hin1I GRCGYC 2 cut(s) 1133, 1151
Hin6I GCGC 3 cut(s) 1133, 1151, 1487
HinP1I GCGC 3 cut(s) 1133, 1151, 1487
HincII GTYRAC 2 cut(s) 265, 776
HindII GTYRAC 2 cut(s) 265, 776
HpaI GTTAAC 1 cut(s) 265
HpaII CCGG 1 cut(s) 1670
HphI GGTGA 5 cut(s) 236, 359, 875, 931, 1330
Hpy166II GTNNAC 7 cut(s) 247, 265, 776, 1547, 1889, 2404, 2426
Hpy188I TCNGA 5 cut(s) 613, 1021, 1342, 1366, 2239
Hpy188III TCNNGA 8 cut(s) 566, 577, 644, 1293, 1376, 1670, 1738, 2132
Hpy8I GTNNAC 7 cut(s) 247, 265, 776, 1547, 1889, 2404, 2426
Hpy99I CGWCG 2 cut(s) 1021, 1098
HpyAV CCTTC 3 cut(s) 1206, 1528, 1573
HpyCH4III ACNGT 4 cut(s) 244, 1054, 1105, 2152
HpyCH4IV ACGT 1 cut(s) 1246
HpyCH4V TGCA 6 cut(s) 401, 428, 1009, 1228, 1808, 1889
HpyF10VI GCNNNNNNNGC 4 cut(s) 320, 329, 986, 1238
HpyF3I CTNAG 5 cut(s) 506, 1137, 1155, 1431, 2238
HpySE526I ACGT 1 cut(s) 1246
Hsp92I GRCGYC 2 cut(s) 1133, 1151
HspAI GCGC 3 cut(s) 1133, 1151, 1487
KasI GGCGCC 2 cut(s) 1132, 1150
Kpn2I TCCGGA 1 cut(s) 1669
KspAI GTTAAC 1 cut(s) 265
Kzo9I GATC 5 cut(s) 544, 1021, 1235, 1975, 2299
LmnI GCTCC 3 cut(s) 328, 423, 1381
Lsp1109I GCAGC 2 cut(s) 1435, 1786
LweI GCATC 6 cut(s) 102, 415, 739, 1363, 1492, 1503
MaeI CTAG 9 cut(s) 153, 231, 633, 1371, 1376, 1881, 1935, 2294, 2445
MaeII ACGT 1 cut(s) 1246
MaeIII GTNAC 5 cut(s) 489, 1318, 1387, 2200, 2222
MalI GATC 5 cut(s) 546, 1023, 1237, 1977, 2301
MboI GATC 5 cut(s) 544, 1021, 1235, 1975, 2299
MfeI CAATTG 6 cut(s) 315, 1027, 1313, 2037, 2259, 2324
MflI RGATCY 2 cut(s) 544, 1021
MhlI GDGCHC 2 cut(s) 325, 1891
MlsI TGGCCA 1 cut(s) 278
MluNI TGGCCA 1 cut(s) 278
Mly113I GGCGCC 2 cut(s) 1133, 1151
MlyI GAGTC 3 cut(s) 582, 1415, 1743
MmeI TCCRAC 3 cut(s) 999, 1124, 2413
Mox20I TGGCCA 1 cut(s) 278
MroI TCCGGA 1 cut(s) 1669
MscI TGGCCA 1 cut(s) 278
MslI CAYNNNNRTG 4 cut(s) 45, 648, 917, 2175
Msp20I TGGCCA 1 cut(s) 278
MspI CCGG 1 cut(s) 1670
MspR9I CCNGG 1 cut(s) 447
MunI CAATTG 6 cut(s) 315, 1027, 1313, 2037, 2259, 2324
Mva1269I GAATGC 2 cut(s) 80, 1784
MvaI CCWGG 1 cut(s) 447
MwoI GCNNNNNNNGC 4 cut(s) 320, 329, 986, 1238
NarI GGCGCC 2 cut(s) 1133, 1151
NdeII GATC 5 cut(s) 544, 1021, 1235, 1975, 2299
NlaIV GGNNCC 7 cut(s) 324, 384, 1023, 1134, 1152, 1383, 1584
NmuCI GTSAC 1 cut(s) 1318
NspI RCATGY 6 cut(s) 1037, 1853, 1990, 2104, 2188, 2390
OliI CACNNNNGTG 1 cut(s) 917
PagI TCATGA 2 cut(s) 576, 643
PceI AGGCCT 1 cut(s) 235
PciI ACATGT 1 cut(s) 2386
PcsI WCGNNNNNNNCGW 1 cut(s) 592
PctI GAATGC 2 cut(s) 80, 1784
PfeI GAWTC 8 cut(s) 227, 395, 817, 1085, 1189, 1557, 2318, 2362
PkrI GCNGC 2 cut(s) 1450, 1776
PleI GAGTC 3 cut(s) 581, 1414, 1742
PluTI GGCGCC 2 cut(s) 1136, 1154
PpsI GAGTC 3 cut(s) 581, 1414, 1742
PscI ACATGT 1 cut(s) 2386
PshBI ATTAAT 3 cut(s) 306, 873, 1419
Psp6I CCWGG 1 cut(s) 445
PspGI CCWGG 1 cut(s) 445
PspN4I GGNNCC 7 cut(s) 324, 384, 1023, 1134, 1152, 1383, 1584
PspPI GGNCC 4 cut(s) 383, 638, 886, 1564
PsuI RGATCY 2 cut(s) 544, 1021
RsaI GTAC 8 cut(s) 24, 256, 697, 1076, 1854, 2046, 2348, 2419
RsaNI GTAC 8 cut(s) 23, 255, 696, 1075, 1853, 2045, 2347, 2418
RseI CAYNNNNRTG 4 cut(s) 45, 648, 917, 2175
SatI GCNGC 2 cut(s) 1449, 1775
Sau3AI GATC 5 cut(s) 544, 1021, 1235, 1975, 2299
Sau96I GGNCC 4 cut(s) 383, 638, 886, 1564
SchI GAGTC 3 cut(s) 582, 1415, 1743
ScrFI CCNGG 1 cut(s) 447
SduI GDGCHC 2 cut(s) 325, 1891
SfaNI GCATC 6 cut(s) 102, 415, 739, 1363, 1492, 1503
SfcI CTRYAG 3 cut(s) 360, 756, 2148
SfoI GGCGCC 2 cut(s) 1134, 1152
SinI GGWCC 1 cut(s) 383
SmiMI CAYNNNNRTG 4 cut(s) 45, 648, 917, 2175
SmlI CTYRAG 2 cut(s) 1113, 2211
SmoI CTYRAG 2 cut(s) 1113, 2211
SseBI AGGCCT 1 cut(s) 235
SsiI CCGC 3 cut(s) 330, 826, 1847
SspDI GGCGCC 2 cut(s) 1132, 1150
SspI AATATT 2 cut(s) 1824, 2090
SspMI CTAG 9 cut(s) 153, 231, 633, 1371, 1376, 1881, 1935, 2294, 2445
StuI AGGCCT 1 cut(s) 235
StyD4I CCNGG 1 cut(s) 445
StyI CCWWGG 1 cut(s) 250
TaaI ACNGT 4 cut(s) 244, 1054, 1105, 2152
TaiI ACGT 1 cut(s) 1249
TaqI TCGA 8 cut(s) 96, 484, 880, 1279, 1294, 1732, 1921, 2360
TatI WGTACW 5 cut(s) 22, 1074, 1852, 2044, 2417
TfiI GAWTC 8 cut(s) 227, 395, 817, 1085, 1189, 1557, 2318, 2362
TscAI CASTG 3 cut(s) 921, 1528, 2157
TseFI GTSAC 1 cut(s) 1318
TseI GCWGC 2 cut(s) 1448, 1774
Tsp45I GTSAC 1 cut(s) 1318
TspGWI ACGGA 2 cut(s) 47, 1676
TspRI CASTG 3 cut(s) 921, 1528, 2157
VneI GTGCAC 1 cut(s) 1887
VpaK11BI GGWCC 1 cut(s) 383
VspI ATTAAT 3 cut(s) 306, 873, 1419
XapI RAATTY 6 cut(s) 404, 591, 730, 908, 922, 1496
XbaI TCTAGA 1 cut(s) 1375
XceI RCATGY 6 cut(s) 1037, 1853, 1990, 2104, 2188, 2390
XmiI GTMKAC 1 cut(s) 246
XspI CTAG 9 cut(s) 153, 231, 633, 1371, 1376, 1881, 1935, 2294, 2445
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.