AT3G26210

cytochrome P450

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
9592727 .. 9595283
2557 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G26210.1

Sequence Viewer

Length: 1506 bp
ATGTCAATTTTCCTCTGTTTCCTCTTGCTTTTGCTACTTCTTTTAGTAACAATAATCTTCACAAGAAAATCTCAATCCTCAAAACTGAAACTTCCTCCGGGTCCACCAAAACTTCCGATTATCGGAAACTTACACTACCTTAACGGATTACCTCACAAATGTCTCCTAAACCTCTGGAAAATCCACGGACCAGTGATGCAGCTCCAGTTAGGATACGTCCCTCTAGTCGTAATCTCCTCAAACCAAGCAGCAGAAGAAGTTCTCAAAACTCATGACCTAGATTGTTGCAGCCGACCAGAAACCATAGCGTCAAAAACAATATCTTACAACTTCAAAGACATAGGATTCGCTCCTTACGGCGAAGAATGGAGAGCGTTGAGGAAGCTCGCTGTGATCGAGCTATTCAGCTTGAAAAAATTCAACTCTTTTAGGTATATAAGAGAAGAAGAGAATGACTTGTTGGTCAAGAAACTCTCTGAAGCTTCAGAGAAACAATCTCCCGTGAATTTGAAGAAAGCCCTTTTCACTCTAAGCGCTAGTATCGTGTGTAGACTCGCTTTCGGTCAAAATCTTCACGAATCCGAGTTTATAGATGAAGATAGCATGGAGGATTTAGCTTCTAGGTCGGAGAAGATTCAGGCGAAATTCGCTTTCTCTAACTTCTTCCCCGGAGGTTGGATTCTTGATAAAATCACCGGTCAAAGCAAGAGCCTTAACGAAATTTTTGCTGATCTCGACGGATTCTTTAACCAAGTGCTCGATGATCATCTAAAGCCAGGAAGAAAAGTATTAGAGACTCCAGATGTTGTGGATGTGATGATTGATATGATGAATAAACAAAGCCAAGATGGTTCTTTTAAGCTCACTACTGATCATATCAAAGGAATCATCTCTGATATATTTCTAGCCGGAGTAAACACAAGTGCAACGACCATTCTTTGGGCAATGACAGAGTTAATAAGAAACCCAAGAGTGATGAAGAAAGTGCAAGATGAGGTTAGGACAGTACTTGGTGAAAAAAGAGACAGAATCACAGAACAAGATCTTAACCAACTTAACTACTTCAAGCTAGTGATCAAAGAGACATTTAGATTACACCCAGCAGCTCCACTTTTATTACCAAGAGAGGCAATGGCTAAAATCAAGATCCAAGGCTATGACATTCCAGAGAAAACTCAGATCATGGTCAATGTTTACGCGATAGGACGTGATCCTGACCTCTGGGAGAATCCAGAAGAGTTTAAACCGGAAAGATTCGTTGATAGTTCTGTTGATTATAGAGGACTTAACTTCGAGCTTCTACCGTTTGGTTCTGGTAGAAGGATTTGTCCCGGTATGACGATGGGGATCGCGACAGTCGAATTAGGATTGTTGAATTTACTTTACTTCTTTGATTGGGGATTGCCTGAAGGAAGGACAGTGAAAGATATCGATTTGGAAGAAGAAGGTGCGATTATTATTGGCAAGAAAGTTTCGCTTGAACTTGTGCCTACTCGTCGTCAATGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

501

Amino Acids

56.92

Weight (kDa)

6.31

Isoelectric Point (pI)

38.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 32 - 487 2e-99 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000354)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13080 AT1G13080 AT1G13090 AT1G13090 AT1G13100 AT1G13110 AT2G02580 AT2G24180 AT3G26150 AT3G26160 AT3G26170 AT3G26180 AT3G26180 AT3G26190 AT3G26200 AT3G26210 AT3G26290 AT3G26290 AT3G26300 AT3G26310 AT3G26320 AT3G26330 AT3G26830 AT3G44250 AT3G53280 AT3G53290 AT3G53300 AT3G53305 AT5G25120 AT5G25130 AT5G25140 AT5G25180 AT5G35715 AT5G57260
fragaria_vesca FvH4_4g25390 FvH4_4g25390 FvH4_4g25390
malus_domestica MD13G1103500.v1.1 MD13G1103800.v1.1 MD13G1104100.v1.1 MD16G1103600.v1.1 MD16G1104000.v1.1 MD16G1104200.v1.1 MD16G1104300.v1.1
prunus_persica Prupe.1G170800_v2.0.a1 Prupe.1G242300_v2.0.a1 Prupe.1G242400_v2.0.a1
pyrus_communis pycom13g09040 pycom16g08850 pycom16g08860
rosa_chinensis RchiOBHm_Chr4g0419321 RchiOBHm_Chr4g0419411 RchiOBHm_Chr4g0419461 RchiOBHm_Chr4g0419481 RchiOBHm_Chr4g0419491 RchiOBHm_Chr4g0419571 RchiOBHm_Chr4g0432681 RchiOBHm_Chr4g0432701 RchiOBHm_Chr5g0025811
rosa_laevigata RLG00000003494 RLG00000006819 RLG00000006820 RLG00000006821 RLG00000006823 RLG00000007814 RLG00000007815 RLG00000032878
rosa_multiflora Rmu_co8315439.1_g000001 Rmu_sc0000455.1_g000013 Rmu_sc0000455.1_g000035 Rmu_sc0000455.1_g000058 Rmu_sc0000675.1_g000043 Rmu_sc0001912.1_g000035 Rmu_sc0002401.1_g000014 Rmu_sc0004932.1_g000013 Rmu_sc0008245.1_g000007 Rmu_sc0009481.1_g000005 Rmu_ssc0000467.1_g000029
rosa_roxburghii Rroxscaffold_1G00053390 Rroxscaffold_1G00054350 Rroxscaffold_4G00324380 Rroxscaffold_5G00362300 Rroxscaffold_5G00362360 Rroxscaffold_5G00374140 Rroxscaffold_5G00374160
rosa_rugosa Rorug04G0158300 Rorug04G0261600 Rorug04G0261700 Rorug04G0261800
rosa_samantha Rh4AG220300 Rh4AG316100 Rh4BG221600 Rh4BG222000 Rh4BG222100 Rh4BG222200 Rh4BG324100 Rh4CG233000 Rh4CG233100 Rh4CG233200 Rh4CG233900 Rh4CG339100 Rh4DG319500
rosa_wichuraiana Rw4G018840 Rw4G018880 Rw4G018900 Rw4G018930 Rw4G027500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 461
AccB7I CCANNNNNTGG 1 cut(s) 939
AccI GTMKAC 1 cut(s) 550
AccII CGCG 2 cut(s) 1199, 1352
AclWI GGATC 3 cut(s) 1141, 1205, 1355
AcsI RAATTY 5 cut(s) 416, 505, 644, 720, 1375
AcuI CTGAAG 3 cut(s) 468, 498, 1428
AfaI GTAC 1 cut(s) 1008
AfeI AGCGCT 1 cut(s) 535
AfiI CCNNNNNNNGG 3 cut(s) 122, 675, 939
AgeI ACCGGT 1 cut(s) 695
AgsI TTSAA 7 cut(s) 334, 412, 421, 511, 1066, 1375, 1481
AjiI CACGTC 1 cut(s) 1208
AjnI CCWGG 1 cut(s) 775
AjuI GAANNNNNNNTTGG 2 cut(s) 443, 475
Alw21I GWGCWC 1 cut(s) 759
Alw26I GTCTC 4 cut(s) 167, 788, 1017, 1076
AlwI GGATC 3 cut(s) 1141, 1205, 1355
Aor51HI AGCGCT 1 cut(s) 535
ApeKI GCWGC 4 cut(s) 199, 248, 288, 1103
ApoI RAATTY 5 cut(s) 416, 505, 644, 720, 1375
ArsI GACNNNNNNTTYG 2 cut(s) 329, 361
AsiGI ACCGGT 1 cut(s) 695
Asp700I GAANNNNTTC 2 cut(s) 258, 416
AspLEI GCGC 1 cut(s) 536
AspS9I GGNCC 2 cut(s) 101, 188
AsuC2I CCSGG 3 cut(s) 99, 669, 1332
AsuHPI GGTGA 2 cut(s) 685, 1025
AvaII GGWCC 2 cut(s) 101, 188
Bbv12I GWGCWC 1 cut(s) 759
BbvI GCAGC 4 cut(s) 211, 260, 300, 1115
BccI CCATC 2 cut(s) 842, 1336
BceAI ACGGC 1 cut(s) 373
BcgI CGANNNNNNTGC 2 cut(s) 707, 741
BciT130I CCWGG 1 cut(s) 777
BciVI GTATCC 1 cut(s) 206
BclI TGATCA 3 cut(s) 763, 871, 1074
BcnI CCSGG 3 cut(s) 99, 669, 1332
BcoDI GTCTC 4 cut(s) 167, 788, 1017, 1076
BfaI CTAG 6 cut(s) 224, 278, 537, 621, 905, 1070
BfoI RGCGCY 1 cut(s) 537
BfuI GTATCC 1 cut(s) 206
BglII AGATCT 1 cut(s) 1042
BisI GCNGC 4 cut(s) 200, 249, 289, 1104
BlsI GCNGC 4 cut(s) 201, 250, 290, 1105
BmcAI AGTACT 1 cut(s) 1008
Bme1390I CCNGG 4 cut(s) 99, 669, 777, 1332
Bme18I GGWCC 2 cut(s) 101, 188
BmgBI CACGTC 1 cut(s) 1208
BmgT120I GGNCC 2 cut(s) 101, 188
BmiI GGNNCC 1 cut(s) 102
BmrFI CCNGG 4 cut(s) 99, 669, 777, 1332
BmsI GCATC 1 cut(s) 186
BpmI CTGGAG 2 cut(s) 188, 783
BpuMI CCSGG 3 cut(s) 99, 669, 1332
Bsa29I ATCGAT 1 cut(s) 1431
BsaBI GATNNNNATC 2 cut(s) 765, 1346
BsaJI CCNNGG 3 cut(s) 184, 667, 1150
BsaWI WCCGGW 2 cut(s) 695, 1246
Bsc4I CCNNNNNNNGG 3 cut(s) 122, 675, 939
Bse118I RCCGGY 1 cut(s) 695
Bse1I ACTGG 2 cut(s) 191, 205
Bse3DI GCAATG 2 cut(s) 951, 1137
Bse8I GATNNNNATC 2 cut(s) 765, 1346
BseBI CCWGG 1 cut(s) 777
BseCI ATCGAT 1 cut(s) 1431
BseDI CCNNGG 3 cut(s) 184, 667, 1150
BseGI GGATG 1 cut(s) 817
BseJI GATNNNNATC 2 cut(s) 765, 1346
BseLI CCNNNNNNNGG 3 cut(s) 122, 675, 939
BseMI GCAATG 2 cut(s) 951, 1137
BseMII CTCAG 1 cut(s) 1190
BseNI ACTGG 2 cut(s) 191, 205
BseRI GAGGAG 1 cut(s) 226
BseXI GCAGC 4 cut(s) 211, 260, 300, 1115
BseYI CCCAGC 1 cut(s) 1099
Bsh1236I CGCG 2 cut(s) 1199, 1352
BshTI ACCGGT 1 cut(s) 695
BshVI ATCGAT 1 cut(s) 1431
BsiHKAI GWGCWC 1 cut(s) 759
BsiSI CCGG 6 cut(s) 98, 669, 696, 909, 1247, 1332
BslFI GGGAC 2 cut(s) 203, 1314
BslI CCNNNNNNNGG 3 cut(s) 122, 675, 939
BsmAI GTCTC 4 cut(s) 167, 788, 1017, 1076
BsmFI GGGAC 2 cut(s) 203, 1314
Bsp1286I GDGCHC 1 cut(s) 759
Bsp68I TCGCGA 1 cut(s) 1352
BspCNI CTCAG 1 cut(s) 1189
BspDI ATCGAT 1 cut(s) 1431
BspFNI CGCG 2 cut(s) 1199, 1352
BspHI TCATGA 1 cut(s) 271
BspLI GGNNCC 1 cut(s) 102
BspPI GGATC 3 cut(s) 1141, 1205, 1355
BsrDI GCAATG 2 cut(s) 951, 1137
BsrFI RCCGGY 1 cut(s) 695
BsrI ACTGG 2 cut(s) 191, 205
BssAI RCCGGY 1 cut(s) 695
BssECI CCNNGG 3 cut(s) 184, 667, 1150
BssT1I CCWWGG 1 cut(s) 1150
Bst2UI CCWGG 1 cut(s) 777
Bst4CI ACNGT 4 cut(s) 1006, 1305, 1357, 1420
Bst6I CTCTTC 2 cut(s) 441, 1230
BstC8I GCNNGC 1 cut(s) 387
BstDEI CTNAG 2 cut(s) 530, 1176
BstDSI CCRYGG 1 cut(s) 184
BstF5I GGATG 1 cut(s) 817
BstFNI CGCG 2 cut(s) 1199, 1352
BstH2I RGCGCY 1 cut(s) 537
BstHHI GCGC 1 cut(s) 536
BstMAI GTCTC 4 cut(s) 167, 788, 1017, 1076
BstMWI GCNNNNNNNGC 1 cut(s) 647
BstNI CCWGG 1 cut(s) 777
BstSCI CCNGG 4 cut(s) 97, 667, 775, 1330
BstUI CGCG 2 cut(s) 1199, 1352
BstV1I GCAGC 4 cut(s) 211, 260, 300, 1115
BstX2I RGATCY 2 cut(s) 1042, 1146
BstYI RGATCY 2 cut(s) 1042, 1146
Bsu15I ATCGAT 1 cut(s) 1431
BsuI GTATCC 1 cut(s) 206
BsuTUI ATCGAT 1 cut(s) 1431
BtgI CCRYGG 1 cut(s) 184
BtrI CACGTC 1 cut(s) 1208
BtsCI GGATG 1 cut(s) 817
BtsIMutI CAGTG 2 cut(s) 198, 1425
BtuMI TCGCGA 1 cut(s) 1352
Cac8I GCNNGC 1 cut(s) 387
CciI TCATGA 1 cut(s) 271
CfoI GCGC 1 cut(s) 536
Cfr10I RCCGGY 1 cut(s) 695
Cfr13I GGNCC 2 cut(s) 101, 188
ClaI ATCGAT 1 cut(s) 1431
CseI GACGC 1 cut(s) 297
Csp6I GTAC 1 cut(s) 1007
CspAI ACCGGT 1 cut(s) 695
CviAII CATG 3 cut(s) 272, 604, 1183
CviQI GTAC 1 cut(s) 1007
DdeI CTNAG 2 cut(s) 530, 1176
DraI TTTAAA 1 cut(s) 1243
DrdI GACNNNNNNGTC 1 cut(s) 461
DseDI GACNNNNNNGTC 1 cut(s) 461
Eam1104I CTCTTC 2 cut(s) 441, 1230
EarI CTCTTC 2 cut(s) 441, 1230
Eco130I CCWWGG 1 cut(s) 1150
Eco32I GATATC 1 cut(s) 1429
Eco47I GGWCC 2 cut(s) 101, 188
Eco47III AGCGCT 1 cut(s) 535
Eco57I CTGAAG 3 cut(s) 468, 498, 1428
EcoRII CCWGG 1 cut(s) 775
EcoRV GATATC 1 cut(s) 1429
EcoT14I CCWWGG 1 cut(s) 1150
ErhI CCWWGG 1 cut(s) 1150
FaeI CATG 3 cut(s) 275, 607, 1186
FalI AAGNNNNNCTT 2 cut(s) 1461, 1493
FaqI GGGAC 2 cut(s) 203, 1314
FatI CATG 3 cut(s) 271, 603, 1182
FbaI TGATCA 3 cut(s) 763, 871, 1074
FblI GTMKAC 1 cut(s) 550
Fnu4HI GCNGC 4 cut(s) 200, 249, 289, 1104
FokI GGATG 1 cut(s) 824
Fsp4HI GCNGC 4 cut(s) 200, 249, 289, 1104
FspBI CTAG 6 cut(s) 224, 278, 537, 621, 905, 1070
GlaI GCGC 1 cut(s) 535
GluI GCNGC 4 cut(s) 200, 249, 289, 1104
GsaI CCCAGC 1 cut(s) 1103
GsuI CTGGAG 2 cut(s) 188, 783
HaeII RGCGCY 1 cut(s) 537
HapII CCGG 6 cut(s) 98, 669, 696, 909, 1247, 1332
HgaI GACGC 1 cut(s) 297
HhaI GCGC 1 cut(s) 536
Hin1II CATG 3 cut(s) 275, 607, 1186
Hin6I GCGC 1 cut(s) 534
HinP1I GCGC 1 cut(s) 534
HindIII AAGCTT 1 cut(s) 480
HpaII CCGG 6 cut(s) 98, 669, 696, 909, 1247, 1332
HphI GGTGA 2 cut(s) 685, 1025
Hpy166II GTNNAC 4 cut(s) 104, 551, 916, 1195
Hpy188I TCNGA 8 cut(s) 117, 125, 478, 487, 583, 628, 895, 1179
Hpy8I GTNNAC 4 cut(s) 104, 551, 916, 1195
Hpy99I CGWCG 2 cut(s) 740, 1500
HpyAV CCTTC 4 cut(s) 1314, 1403, 1407, 1439
HpyCH4III ACNGT 4 cut(s) 1006, 1305, 1357, 1420
HpyCH4IV ACGT 2 cut(s) 216, 1207
HpyCH4V TGCA 4 cut(s) 199, 288, 926, 988
HpyF10VI GCNNNNNNNGC 1 cut(s) 647
HpyF3I CTNAG 2 cut(s) 530, 1176
HpySE526I ACGT 2 cut(s) 216, 1207
Hsp92II CATG 3 cut(s) 275, 607, 1186
HspAI GCGC 1 cut(s) 534
Ksp22I TGATCA 3 cut(s) 763, 871, 1074
LmnI GCTCC 3 cut(s) 207, 355, 1111
Lsp1109I GCAGC 4 cut(s) 211, 260, 300, 1115
LweI GCATC 1 cut(s) 186
MaeI CTAG 6 cut(s) 224, 278, 537, 621, 905, 1070
MaeII ACGT 2 cut(s) 216, 1207
MaeIII GTNAC 1 cut(s) 46
MflI RGATCY 2 cut(s) 1042, 1146
MhlI GDGCHC 1 cut(s) 759
MluCI AATT 7 cut(s) 6, 416, 505, 644, 720, 1361, 1375
MlyI GAGTC 2 cut(s) 546, 790
MmeI TCCRAC 2 cut(s) 606, 656
MroXI GAANNNNTTC 2 cut(s) 258, 416
MseI TTAA 9 cut(s) 141, 714, 747, 858, 956, 1047, 1056, 1242, 1287
MspI CCGG 6 cut(s) 98, 669, 696, 909, 1247, 1332
MspR9I CCNGG 4 cut(s) 99, 669, 777, 1332
MssI GTTTAAAC 1 cut(s) 1243
MvaI CCWGG 1 cut(s) 777
MvnI CGCG 2 cut(s) 1199, 1352
MwoI GCNNNNNNNGC 1 cut(s) 647
NciI CCSGG 3 cut(s) 99, 669, 1332
NlaIII CATG 3 cut(s) 275, 607, 1186
NlaIV GGNNCC 1 cut(s) 102
NruI TCGCGA 1 cut(s) 1352
PagI TCATGA 1 cut(s) 271
PcsI WCGNNNNNNNCGW 2 cut(s) 393, 1356
PdmI GAANNNNTTC 2 cut(s) 258, 416
PfeI GAWTC 9 cut(s) 345, 578, 634, 679, 741, 885, 1029, 1228, 1254
PflMI CCANNNNNTGG 1 cut(s) 939
PinAI ACCGGT 1 cut(s) 695
PkrI GCNGC 4 cut(s) 201, 250, 290, 1105
PleI GAGTC 2 cut(s) 546, 790
PmeI GTTTAAAC 1 cut(s) 1243
PpsI GAGTC 2 cut(s) 546, 790
Psp6I CCWGG 1 cut(s) 775
PspFI CCCAGC 1 cut(s) 1099
PspGI CCWGG 1 cut(s) 775
PspN4I GGNNCC 1 cut(s) 102
PspPI GGNCC 2 cut(s) 101, 188
PsuI RGATCY 2 cut(s) 1042, 1146
RruI TCGCGA 1 cut(s) 1352
RsaI GTAC 1 cut(s) 1008
RsaNI GTAC 1 cut(s) 1007
SaqAI TTAA 9 cut(s) 141, 714, 747, 858, 956, 1047, 1056, 1242, 1287
SatI GCNGC 4 cut(s) 200, 249, 289, 1104
Sau96I GGNCC 2 cut(s) 101, 188
ScaI AGTACT 1 cut(s) 1008
SchI GAGTC 2 cut(s) 546, 790
ScrFI CCNGG 4 cut(s) 99, 669, 777, 1332
SduI GDGCHC 1 cut(s) 759
SfaNI GCATC 1 cut(s) 186
SinI GGWCC 2 cut(s) 101, 188
Sse9I AATT 7 cut(s) 6, 416, 505, 644, 720, 1361, 1375
SspMI CTAG 6 cut(s) 224, 278, 537, 621, 905, 1070
StyD4I CCNGG 4 cut(s) 97, 667, 775, 1330
StyI CCWWGG 1 cut(s) 1150
TaaI ACNGT 4 cut(s) 1006, 1305, 1357, 1420
TaiI ACGT 2 cut(s) 219, 1210
TaqI TCGA 6 cut(s) 396, 735, 759, 1293, 1359, 1431
TaqII GACCGA 1 cut(s) 551
TasI AATT 7 cut(s) 6, 416, 505, 644, 720, 1361, 1375
TatI WGTACW 1 cut(s) 1006
TfiI GAWTC 9 cut(s) 345, 578, 634, 679, 741, 885, 1029, 1228, 1254
Tru1I TTAA 9 cut(s) 141, 714, 747, 858, 956, 1047, 1056, 1242, 1287
Tru9I TTAA 9 cut(s) 141, 714, 747, 858, 956, 1047, 1056, 1242, 1287
TscAI CASTG 2 cut(s) 198, 1425
TseI GCWGC 4 cut(s) 199, 248, 288, 1103
TspDTI ATGAA 3 cut(s) 609, 845, 992
TspGWI ACGGA 3 cut(s) 159, 201, 753
TspRI CASTG 2 cut(s) 198, 1425
Van91I CCANNNNNTGG 1 cut(s) 939
VpaK11BI GGWCC 2 cut(s) 101, 188
XapI RAATTY 5 cut(s) 416, 505, 644, 720, 1375
XmiI GTMKAC 1 cut(s) 550
XmnI GAANNNNTTC 2 cut(s) 258, 416
XspI CTAG 6 cut(s) 224, 278, 537, 621, 905, 1070
ZrmI AGTACT 1 cut(s) 1008
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.