Prupe.1G242300_v2.0.a1

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000354
Physical Location & Seq
Reverse (-)
25599781 .. 25601834
2054 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G242300.1

Sequence Viewer

Length: 1548 bp
ATGCCTTTCATCACCCCACTACTCATATGCCTTCCATTTCTTGTCCTCCTGCTTTTTCTTTCACTCAAAAAAAATAAGCAACAACATCAAAGGCACCTTCCGCCGGGCCCTTCCAAGCTTCCCTTCATAGGCAACTTGCACCAACTTGGCTCCTCCACTCACCAATCTCTCTGGAAACTCTCCAAAACGTACGGACCGGTCATGCTCCTCCATCTCGGTCGCGTACCAACTCTCATAATCTCATCAGCTGAGGCAGCCAAAGAGGCCTTAAAAACCAATGACCTCCTCTGTTGCACCAGACCCACCACGGCCGGCTCCCGCAGGCTTACATACAACTATCTAGACGTGGCATTTGCGCCTTATGGCGAGTACTGGAGAGAGATTAGAAAAATATGCGTGCTTGAGCTCCTCAGCGTGAAGAGGGTCCAGTCGTATTGGTCTGTCAGGGAAGAAGAGGTGGCCAAATTGGTCAATTCACTCTCTTCTTCCTCATCTTCTGGTGCTCCAGTTGATCTCACTGAGAAACTGTTTGTTCTCACTGCCAGTATAATTTTCAGGATTGTGTTTGGGACAAGTTTCCGAGGAAGCAAGTTTGAGCATGATACAAATATTCCTGAGTTGATTCATGACATTCAGACCATGCTTGGAGGCTTGTCTGGAGCCGACTACTTTCCGTCTTTTATCGGGTGGATTATGGACAGGGTTTCCGGTGTGCATAAAGAGTTTGATAGGATTTGGAATGAGTTGGATGGTTTTTTCCAGCAGGTGATTGATGATCATCTCAGGGCCGGGAGGGCAGTAGGGGAGCAAGATCATGAAGACATAGTTGATGTGCTGCTTAAGATAGTGAGGGAGCAAACTGGGTTATTTGGAGCTGCTCAACTTGGTCATAATAACATCAAGGCAGTCCTCATGAATTTATTTTTAGGTGGAATAGATACCAGTGCAACTACAATGACGTGGGCGATGGCAGAGCTAGCTAGGAAACCCAAACTGATGAAGAAAGCCCAGGAAGAAGTTAGAAGATGCATTGGAAACAAAGGAAAAATCAACGAAGGAGATACAGATGAGCTTGAATACCTCAAGATGATAATCAAAGAGACCCTCAGATTGCATCCCCCAGCTCCATTGATTCTGCCAAGAGAAGCCATGTCCCATTTTAAAATCCAAGGGTATGATGTTGACCCCAGAACGGTGGTATTTGTCAATGACTGGGCAATTGCACGAGACCCCGAGTCTTGGAAGGACCCAGAAGAATTCATCCCAGAAAGGTTTGATGGCAGCTCTATTGATTATAAGGGGCAGCATTTCGAGTTTTTGCCATTTGGAGCTGGTCGAAGAGTTTGTCCTGGGATGTACATGGGAACAACAACAATAGCGTTTGGACTTGCAAATCTTCTCTACTGGTTTGATTGGAAGTTGCCTAATGGAATGAAGGAGGAAGATATCGACATGGAAGAAACTGGTGGCCTTTCCCTCACCATCGCTAAGAAAACTGCTTTCCACCTTGTCCCCGTGAAGTTTTCTCACGAAACGCATATAAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

516

Amino Acids

58.22

Weight (kDa)

6.64

Isoelectric Point (pI)

39.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000354)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13080 AT1G13080 AT1G13090 AT1G13090 AT1G13100 AT1G13110 AT2G02580 AT2G24180 AT3G26150 AT3G26160 AT3G26170 AT3G26180 AT3G26180 AT3G26190 AT3G26200 AT3G26210 AT3G26290 AT3G26290 AT3G26300 AT3G26310 AT3G26320 AT3G26330 AT3G26830 AT3G44250 AT3G53280 AT3G53290 AT3G53300 AT3G53305 AT5G25120 AT5G25130 AT5G25140 AT5G25180 AT5G35715 AT5G57260
fragaria_vesca FvH4_4g25390 FvH4_4g25390 FvH4_4g25390
malus_domestica MD13G1103500.v1.1 MD13G1103800.v1.1 MD13G1104100.v1.1 MD16G1103600.v1.1 MD16G1104000.v1.1 MD16G1104200.v1.1 MD16G1104300.v1.1
prunus_persica Prupe.1G170800_v2.0.a1 Prupe.1G242300_v2.0.a1 Prupe.1G242400_v2.0.a1
pyrus_communis pycom13g09040 pycom16g08850 pycom16g08860
rosa_chinensis RchiOBHm_Chr4g0419321 RchiOBHm_Chr4g0419411 RchiOBHm_Chr4g0419461 RchiOBHm_Chr4g0419481 RchiOBHm_Chr4g0419491 RchiOBHm_Chr4g0419571 RchiOBHm_Chr4g0432681 RchiOBHm_Chr4g0432701 RchiOBHm_Chr5g0025811
rosa_laevigata RLG00000003494 RLG00000006819 RLG00000006820 RLG00000006821 RLG00000006823 RLG00000007814 RLG00000007815 RLG00000032878
rosa_multiflora Rmu_co8315439.1_g000001 Rmu_sc0000455.1_g000013 Rmu_sc0000455.1_g000035 Rmu_sc0000455.1_g000058 Rmu_sc0000675.1_g000043 Rmu_sc0001912.1_g000035 Rmu_sc0002401.1_g000014 Rmu_sc0004932.1_g000013 Rmu_sc0008245.1_g000007 Rmu_sc0009481.1_g000005 Rmu_ssc0000467.1_g000029
rosa_roxburghii Rroxscaffold_1G00053390 Rroxscaffold_1G00054350 Rroxscaffold_4G00324380 Rroxscaffold_5G00362300 Rroxscaffold_5G00362360 Rroxscaffold_5G00374140 Rroxscaffold_5G00374160
rosa_rugosa Rorug04G0158300 Rorug04G0261600 Rorug04G0261700 Rorug04G0261800
rosa_samantha Rh4AG220300 Rh4AG316100 Rh4BG221600 Rh4BG222000 Rh4BG222100 Rh4BG222200 Rh4BG324100 Rh4CG233000 Rh4CG233100 Rh4CG233200 Rh4CG233900 Rh4CG339100 Rh4DG319500
rosa_wichuraiana Rw4G018840 Rw4G018880 Rw4G018900 Rw4G018930 Rw4G027500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1296
AarI CACCTGC 1 cut(s) 754
Acc36I ACCTGC 1 cut(s) 754
AccB1I GGYRCC 1 cut(s) 93
AccII CGCG 1 cut(s) 222
AciI CCGC 2 cut(s) 101, 319
AcoI YGGCCR 2 cut(s) 309, 459
AcsI RAATTY 2 cut(s) 916, 1256
AfaI GTAC 4 cut(s) 191, 225, 371, 1358
AfiI CCNNNNNNNGG 4 cut(s) 103, 128, 1192, 1239
AflII CTTAAG 1 cut(s) 839
AgeI ACCGGT 1 cut(s) 196
AgsI TTSAA 1 cut(s) 1076
AhdI GACNNNNNGTC 1 cut(s) 1234
AjiI CACGTC 2 cut(s) 346, 960
AjnI CCWGG 2 cut(s) 1008, 1348
AjuI GAANNNNNNNTTGG 2 cut(s) 107, 139
Alw21I GWGCWC 2 cut(s) 408, 505
Alw26I GTCTC 2 cut(s) 1094, 1221
Ama87I CYCGRG 1 cut(s) 1232
AoxI GGCC 6 cut(s) 106, 264, 309, 459, 786, 1468
ApaI GGGCCC 1 cut(s) 110
ApeKI GCWGC 5 cut(s) 254, 835, 875, 1281, 1303
ApoI RAATTY 2 cut(s) 916, 1256
ArsI GACNNNNNNTTYG 4 cut(s) 335, 367, 1330, 1362
AsiGI ACCGGT 1 cut(s) 196
AspLEI GCGC 1 cut(s) 358
AspS9I GGNCC 6 cut(s) 106, 107, 194, 424, 786, 1246
AsuC2I CCSGG 2 cut(s) 105, 790
AsuHPI GGTGA 4 cut(s) 4, 152, 778, 1471
AsuNHI GCTAGC 1 cut(s) 976
AvaI CYCGRG 1 cut(s) 1232
AvaII GGWCC 3 cut(s) 194, 424, 1246
BaeGI GKGCMC 1 cut(s) 110
BalI TGGCCA 1 cut(s) 461
BanI GGYRCC 1 cut(s) 93
BanII GRGCYC 2 cut(s) 110, 408
BauI CACGAG 1 cut(s) 1224
BbsI GAAGAC 1 cut(s) 825
Bbv12I GWGCWC 2 cut(s) 408, 505
BbvCI CCTCAGC 2 cut(s) 249, 410
BbvI GCAGC 5 cut(s) 266, 822, 862, 1293, 1315
BccI CCATC 5 cut(s) 219, 743, 961, 1271, 1490
BceAI ACGGC 1 cut(s) 324
BciT130I CCWGG 2 cut(s) 1010, 1350
BclI TGATCA 1 cut(s) 775
BcnI CCSGG 2 cut(s) 105, 790
BcoDI GTCTC 2 cut(s) 1094, 1221
BfaI CTAG 4 cut(s) 341, 977, 981, 1546
BfrI CTTAAG 1 cut(s) 839
BfuAI ACCTGC 1 cut(s) 754
BglI GCCNNNNNGGC 2 cut(s) 263, 794
BisI GCNGC 5 cut(s) 255, 836, 876, 1282, 1304
BlsI GCNGC 5 cut(s) 256, 837, 877, 1283, 1305
BmcAI AGTACT 1 cut(s) 371
Bme1390I CCNGG 4 cut(s) 105, 790, 1010, 1350
Bme18I GGWCC 3 cut(s) 194, 424, 1246
BmeRI GACNNNNNGTC 1 cut(s) 1234
BmeT110I CYCGRG 1 cut(s) 1232
BmgBI CACGTC 2 cut(s) 346, 960
BmgT120I GGNCC 6 cut(s) 106, 107, 194, 424, 786, 1246
BmiI GGNNCC 7 cut(s) 95, 108, 151, 316, 425, 661, 1248
BmrFI CCNGG 4 cut(s) 105, 790, 1010, 1350
BmrI ACTGGG 2 cut(s) 870, 1222
BmsI GCATC 2 cut(s) 1016, 1123
BmtI GCTAGC 1 cut(s) 980
BmuI ACTGGG 2 cut(s) 870, 1222
BpiI GAAGAC 1 cut(s) 825
BpmI CTGGAG 3 cut(s) 394, 489, 678
Bpu10I CCTNAGC 2 cut(s) 249, 410
BpuEI CTTGAG 2 cut(s) 422, 1067
BpuMI CCSGG 2 cut(s) 105, 790
BsaBI GATNNNNATC 2 cut(s) 777, 1091
BsaI GGTCTC 2 cut(s) 1094, 1221
BsaJI CCNNGG 5 cut(s) 306, 580, 1008, 1168, 1349
BsaWI WCCGGW 2 cut(s) 196, 707
Bsc4I CCNNNNNNNGG 4 cut(s) 103, 128, 1192, 1239
Bse118I RCCGGY 2 cut(s) 196, 311
Bse1I ACTGG 9 cut(s) 377, 427, 506, 543, 865, 942, 1217, 1409, 1468
Bse8I GATNNNNATC 2 cut(s) 777, 1091
BseBI CCWGG 2 cut(s) 1010, 1350
BseDI CCNNGG 5 cut(s) 306, 580, 1008, 1168, 1349
BseGI GGATG 4 cut(s) 754, 1114, 1260, 1359
BseJI GATNNNNATC 2 cut(s) 777, 1091
BseLI CCNNNNNNNGG 4 cut(s) 103, 128, 1192, 1239
BseMII CTCAG 6 cut(s) 240, 424, 510, 606, 796, 1120
BseNI ACTGG 9 cut(s) 377, 427, 506, 543, 865, 942, 1217, 1409, 1468
BseRI GAGGAG 4 cut(s) 142, 197, 275, 398
BseSI GKGCMC 1 cut(s) 110
BseX3I CGGCCG 1 cut(s) 309
BseXI GCAGC 5 cut(s) 266, 822, 862, 1293, 1315
BseYI CCCAGC 1 cut(s) 1120
Bsh1236I CGCG 1 cut(s) 222
Bsh1285I CGRYCG 2 cut(s) 220, 312
BshFI GGCC 6 cut(s) 108, 266, 311, 461, 788, 1470
BshNI GGYRCC 1 cut(s) 93
BshTI ACCGGT 1 cut(s) 196
BsiEI CGRYCG 2 cut(s) 220, 312
BsiHKAI GWGCWC 2 cut(s) 408, 505
BsiHKCI CYCGRG 1 cut(s) 1232
BsiSI CCGG 5 cut(s) 104, 197, 312, 708, 789
BsiWI CGTACG 1 cut(s) 189
BslFI GGGAC 3 cut(s) 583, 1138, 1496
BslI CCNNNNNNNGG 4 cut(s) 103, 128, 1192, 1239
BsmAI GTCTC 2 cut(s) 1094, 1221
BsmFI GGGAC 3 cut(s) 583, 1138, 1496
BsnI GGCC 6 cut(s) 108, 266, 311, 461, 788, 1470
Bso31I GGTCTC 2 cut(s) 1094, 1221
BsoBI CYCGRG 1 cut(s) 1232
Bsp120I GGGCCC 1 cut(s) 106
Bsp1286I GDGCHC 3 cut(s) 110, 408, 505
Bsp1407I TGTACA 1 cut(s) 1356
Bsp143I GATC 3 cut(s) 511, 775, 811
BspACI CCGC 2 cut(s) 101, 319
BspANI GGCC 6 cut(s) 108, 266, 311, 461, 788, 1470
BspCNI CTCAG 6 cut(s) 241, 423, 511, 607, 795, 1119
BspFNI CGCG 1 cut(s) 222
BspHI TCATGA 3 cut(s) 625, 814, 912
BspLI GGNNCC 7 cut(s) 95, 108, 151, 316, 425, 661, 1248
BspMI ACCTGC 1 cut(s) 754
BspOI GCTAGC 1 cut(s) 980
BspT107I GGYRCC 1 cut(s) 93
BspTI CTTAAG 1 cut(s) 839
BspTNI GGTCTC 2 cut(s) 1094, 1221
BsrFI RCCGGY 2 cut(s) 196, 311
BsrGI TGTACA 1 cut(s) 1356
BsrI ACTGG 9 cut(s) 377, 427, 506, 543, 865, 942, 1217, 1409, 1468
BssAI RCCGGY 2 cut(s) 196, 311
BssECI CCNNGG 5 cut(s) 306, 580, 1008, 1168, 1349
BssMI GATC 3 cut(s) 511, 775, 811
BssSI CACGAG 1 cut(s) 1224
BssT1I CCWWGG 1 cut(s) 1168
Bst2BI CACGAG 1 cut(s) 1224
Bst2UI CCWGG 2 cut(s) 1010, 1350
Bst4CI ACNGT 2 cut(s) 528, 1195
Bst6I CTCTTC 4 cut(s) 413, 447, 487, 1333
BstAFI CTTAAG 1 cut(s) 839
BstAUI TGTACA 1 cut(s) 1356
BstC8I GCNNGC 4 cut(s) 313, 323, 398, 978
BstDEI CTNAG 7 cut(s) 249, 410, 519, 615, 782, 1106, 1488
BstDSI CCRYGG 1 cut(s) 306
BstF5I GGATG 4 cut(s) 754, 1114, 1260, 1359
BstFNI CGCG 1 cut(s) 222
BstHHI GCGC 1 cut(s) 358
BstKTI GATC 3 cut(s) 514, 778, 814
BstMAI GTCTC 2 cut(s) 1094, 1221
BstMBI GATC 3 cut(s) 511, 775, 811
BstMCI CGRYCG 2 cut(s) 220, 312
BstMWI GCNNNNNNNGC 5 cut(s) 100, 254, 263, 794, 977
BstNI CCWGG 2 cut(s) 1010, 1350
BstSCI CCNGG 4 cut(s) 103, 788, 1008, 1348
BstSLI GKGCMC 1 cut(s) 110
BstUI CGCG 1 cut(s) 222
BstV1I GCAGC 5 cut(s) 266, 822, 862, 1293, 1315
BstV2I GAAGAC 1 cut(s) 825
BstXI CCANNNNNNTGG 1 cut(s) 1195
BstZI CGGCCG 1 cut(s) 309
BsuRI GGCC 6 cut(s) 108, 266, 311, 461, 788, 1470
BtgI CCRYGG 1 cut(s) 306
BtgZI GCGATG 2 cut(s) 980, 1468
BtrI CACGTC 2 cut(s) 346, 960
BtsCI GGATG 4 cut(s) 754, 1114, 1260, 1359
BtsI GCAGTG 1 cut(s) 537
BtsIMutI CAGTG 3 cut(s) 516, 537, 949
BveI ACCTGC 1 cut(s) 754
Cac8I GCNNGC 4 cut(s) 313, 323, 398, 978
CciI TCATGA 3 cut(s) 625, 814, 912
CfoI GCGC 1 cut(s) 358
Cfr10I RCCGGY 2 cut(s) 196, 311
Cfr13I GGNCC 6 cut(s) 106, 107, 194, 424, 786, 1246
CpoI CGGWCCG 1 cut(s) 194
Csp6I GTAC 4 cut(s) 190, 224, 370, 1357
CspAI ACCGGT 1 cut(s) 196
CspI CGGWCCG 1 cut(s) 194
CviAII CATG 9 cut(s) 202, 599, 626, 640, 815, 913, 1150, 1360, 1453
CviQI GTAC 4 cut(s) 190, 224, 370, 1357
DdeI CTNAG 7 cut(s) 249, 410, 519, 615, 782, 1106, 1488
DpnI GATC 3 cut(s) 513, 777, 813
DpnII GATC 3 cut(s) 511, 775, 811
DraI TTTAAA 1 cut(s) 1162
DriI GACNNNNNGTC 1 cut(s) 1234
EaeI YGGCCR 2 cut(s) 309, 459
EagI CGGCCG 1 cut(s) 309
Eam1104I CTCTTC 4 cut(s) 413, 447, 487, 1333
Eam1105I GACNNNNNGTC 1 cut(s) 1234
EarI CTCTTC 4 cut(s) 413, 447, 487, 1333
EciI GGCGGA 1 cut(s) 90
Ecl136II GAGCTC 1 cut(s) 406
EclXI CGGCCG 1 cut(s) 309
Eco130I CCWWGG 1 cut(s) 1168
Eco147I AGGCCT 1 cut(s) 266
Eco24I GRGCYC 2 cut(s) 110, 408
Eco31I GGTCTC 2 cut(s) 1094, 1221
Eco32I GATATC 1 cut(s) 1447
Eco47I GGWCC 3 cut(s) 194, 424, 1246
Eco52I CGGCCG 1 cut(s) 309
Eco53kI GAGCTC 1 cut(s) 406
Eco88I CYCGRG 1 cut(s) 1232
EcoICRI GAGCTC 1 cut(s) 406
EcoO109I RGGNCCY 2 cut(s) 107, 1246
EcoRI GAATTC 1 cut(s) 1256
EcoRII CCWGG 2 cut(s) 1008, 1348
EcoRV GATATC 1 cut(s) 1447
EcoT14I CCWWGG 1 cut(s) 1168
EcoT22I ATGCAT 1 cut(s) 1031
EcoT38I GRGCYC 2 cut(s) 110, 408
ErhI CCWWGG 1 cut(s) 1168
FaeI CATG 9 cut(s) 205, 602, 629, 643, 818, 916, 1153, 1363, 1456
FalI AAGNNNNNCTT 2 cut(s) 107, 139
FaqI GGGAC 3 cut(s) 583, 1138, 1496
FatI CATG 9 cut(s) 201, 598, 625, 639, 814, 912, 1149, 1359, 1452
FauI CCCGC 1 cut(s) 326
FauNDI CATATG 1 cut(s) 26
FbaI TGATCA 1 cut(s) 775
Fnu4HI GCNGC 5 cut(s) 255, 836, 876, 1282, 1304
FokI GGATG 4 cut(s) 761, 1101, 1247, 1366
FriOI GRGCYC 2 cut(s) 110, 408
Fsp4HI GCNGC 5 cut(s) 255, 836, 876, 1282, 1304
FspBI CTAG 4 cut(s) 341, 977, 981, 1546
GlaI GCGC 1 cut(s) 357
GluI GCNGC 5 cut(s) 255, 836, 876, 1282, 1304
GsaI CCCAGC 1 cut(s) 1124
GsuI CTGGAG 3 cut(s) 394, 489, 678
HaeIII GGCC 6 cut(s) 108, 266, 311, 461, 788, 1470
HapII CCGG 5 cut(s) 104, 197, 312, 708, 789
HhaI GCGC 1 cut(s) 358
Hin1II CATG 9 cut(s) 205, 602, 629, 643, 818, 916, 1153, 1363, 1456
Hin6I GCGC 1 cut(s) 356
HinP1I GCGC 1 cut(s) 356
HincII GTYRAC 1 cut(s) 1183
HindII GTYRAC 1 cut(s) 1183
HindIII AAGCTT 1 cut(s) 116
HinfI GANTC 3 cut(s) 622, 1132, 1235
HpaII CCGG 5 cut(s) 104, 197, 312, 708, 789
HphI GGTGA 4 cut(s) 4, 152, 778, 1471
Hpy166II GTNNAC 1 cut(s) 1183
Hpy188I TCNGA 3 cut(s) 581, 636, 1109
Hpy8I GTNNAC 1 cut(s) 1183
HpyAV CCTTC 7 cut(s) 41, 107, 120, 133, 1049, 1237, 1429
HpyCH4III ACNGT 2 cut(s) 528, 1195
HpyCH4IV ACGT 3 cut(s) 188, 345, 959
HpyCH4V TGCA 8 cut(s) 139, 294, 715, 947, 1029, 1114, 1223, 1391
HpyF10VI GCNNNNNNNGC 5 cut(s) 100, 254, 263, 794, 977
HpyF3I CTNAG 7 cut(s) 249, 410, 519, 615, 782, 1106, 1488
HpySE526I ACGT 3 cut(s) 188, 345, 959
Hsp92II CATG 9 cut(s) 205, 602, 629, 643, 818, 916, 1153, 1363, 1456
HspAI GCGC 1 cut(s) 356
KroI GCCGGC 1 cut(s) 311
KroNI GCCGGC 1 cut(s) 313
Ksp22I TGATCA 1 cut(s) 775
Kzo9I GATC 3 cut(s) 511, 775, 811
Lsp1109I GCAGC 5 cut(s) 266, 822, 862, 1293, 1315
LweI GCATC 2 cut(s) 1016, 1123
MaeI CTAG 4 cut(s) 341, 977, 981, 1546
MaeII ACGT 3 cut(s) 188, 345, 959
MalI GATC 3 cut(s) 513, 777, 813
MboI GATC 3 cut(s) 511, 775, 811
MfeI CAATTG 1 cut(s) 1218
MhlI GDGCHC 3 cut(s) 110, 408, 505
MlsI TGGCCA 1 cut(s) 461
MluCI AATT 6 cut(s) 464, 472, 549, 916, 1218, 1256
MluNI TGGCCA 1 cut(s) 461
MlyI GAGTC 1 cut(s) 1244
MmeI TCCRAC 1 cut(s) 726
Mox20I TGGCCA 1 cut(s) 461
Mph1103I ATGCAT 1 cut(s) 1031
MroNI GCCGGC 1 cut(s) 311
MscI TGGCCA 1 cut(s) 461
MseI TTAA 3 cut(s) 269, 840, 1161
Msp20I TGGCCA 1 cut(s) 461
MspA1I CMGCKG 1 cut(s) 248
MspCI CTTAAG 1 cut(s) 839
MspI CCGG 5 cut(s) 104, 197, 312, 708, 789
MspR9I CCNGG 4 cut(s) 105, 790, 1010, 1350
MunI CAATTG 1 cut(s) 1218
MvaI CCWGG 2 cut(s) 1010, 1350
MvnI CGCG 1 cut(s) 222
MwoI GCNNNNNNNGC 5 cut(s) 100, 254, 263, 794, 977
NaeI GCCGGC 1 cut(s) 313
NciI CCSGG 2 cut(s) 105, 790
NdeI CATATG 1 cut(s) 26
NdeII GATC 3 cut(s) 511, 775, 811
NgoMIV GCCGGC 1 cut(s) 311
NheI GCTAGC 1 cut(s) 976
NlaIII CATG 9 cut(s) 205, 602, 629, 643, 818, 916, 1153, 1363, 1456
NlaIV GGNNCC 7 cut(s) 95, 108, 151, 316, 425, 661, 1248
NsiI ATGCAT 1 cut(s) 1031
PagI TCATGA 3 cut(s) 625, 814, 912
PaqCI CACCTGC 1 cut(s) 754
PceI AGGCCT 1 cut(s) 266
PdiI GCCGGC 1 cut(s) 313
PfeI GAWTC 2 cut(s) 622, 1132
Pfl23II CGTACG 1 cut(s) 189
PinAI ACCGGT 1 cut(s) 196
PkrI GCNGC 5 cut(s) 256, 837, 877, 1283, 1305
PleI GAGTC 1 cut(s) 1243
PpsI GAGTC 1 cut(s) 1243
PpuMI RGGWCCY 1 cut(s) 1246
PsiI TTATAA 1 cut(s) 1296
Psp124BI GAGCTC 1 cut(s) 408
Psp5II RGGWCCY 1 cut(s) 1246
Psp6I CCWGG 2 cut(s) 1008, 1348
PspFI CCCAGC 1 cut(s) 1120
PspGI CCWGG 2 cut(s) 1008, 1348
PspLI CGTACG 1 cut(s) 189
PspN4I GGNNCC 7 cut(s) 95, 108, 151, 316, 425, 661, 1248
PspOMI GGGCCC 1 cut(s) 106
PspPI GGNCC 6 cut(s) 106, 107, 194, 424, 786, 1246
PspPPI RGGWCCY 1 cut(s) 1246
PvuII CAGCTG 1 cut(s) 248
RsaI GTAC 4 cut(s) 191, 225, 371, 1358
RsaNI GTAC 4 cut(s) 190, 224, 370, 1357
Rsr2I CGGWCCG 1 cut(s) 194
RsrII CGGWCCG 1 cut(s) 194
SacI GAGCTC 1 cut(s) 408
SaqAI TTAA 3 cut(s) 269, 840, 1161
SatI GCNGC 5 cut(s) 255, 836, 876, 1282, 1304
Sau3AI GATC 3 cut(s) 511, 775, 811
Sau96I GGNCC 6 cut(s) 106, 107, 194, 424, 786, 1246
ScaI AGTACT 1 cut(s) 371
SchI GAGTC 1 cut(s) 1244
ScrFI CCNGG 4 cut(s) 105, 790, 1010, 1350
SduI GDGCHC 3 cut(s) 110, 408, 505
SfaNI GCATC 2 cut(s) 1016, 1123
SinI GGWCC 3 cut(s) 194, 424, 1246
SmlI CTYRAG 3 cut(s) 401, 839, 1082
SmoI CTYRAG 3 cut(s) 401, 839, 1082
Sse9I AATT 6 cut(s) 464, 472, 549, 916, 1218, 1256
SseBI AGGCCT 1 cut(s) 266
SsiI CCGC 2 cut(s) 101, 319
SspI AATATT 1 cut(s) 610
SspMI CTAG 4 cut(s) 341, 977, 981, 1546
SstI GAGCTC 1 cut(s) 408
StuI AGGCCT 1 cut(s) 266
StyD4I CCNGG 4 cut(s) 103, 788, 1008, 1348
StyI CCWWGG 1 cut(s) 1168
TaaI ACNGT 2 cut(s) 528, 1195
TaiI ACGT 3 cut(s) 191, 348, 962
TaqI TCGA 3 cut(s) 1311, 1336, 1449
TaqII GACCGA 1 cut(s) 206
TasI AATT 6 cut(s) 464, 472, 549, 916, 1218, 1256
TatI WGTACW 2 cut(s) 369, 1356
TfiI GAWTC 2 cut(s) 622, 1132
Tru1I TTAA 3 cut(s) 269, 840, 1161
Tru9I TTAA 3 cut(s) 269, 840, 1161
TscAI CASTG 3 cut(s) 523, 544, 949
TseI GCWGC 5 cut(s) 254, 835, 875, 1281, 1303
TspDTI ATGAA 7 cut(s) 115, 614, 831, 929, 1013, 1249, 1448
TspGWI ACGGA 2 cut(s) 207, 663
TspRI CASTG 3 cut(s) 523, 544, 949
Vha464I CTTAAG 1 cut(s) 839
VpaK11BI GGWCC 3 cut(s) 194, 424, 1246
XapI RAATTY 2 cut(s) 916, 1256
XbaI TCTAGA 1 cut(s) 340
XspI CTAG 4 cut(s) 341, 977, 981, 1546
ZrmI AGTACT 1 cut(s) 371
Zsp2I ATGCAT 1 cut(s) 1031
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.