FvH4_1g09820

L-type lectin-domain containing receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000688
Physical Location & Seq
Forward (+)
5332739 .. 5336113
3375 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g09820.t1

Sequence Viewer

Length: 2124 bp
ATGGTGATTCTGTTCCTCTCTCTTCTGTTGCTGCCGGCGGCGGCTATCACCGACGCGCACGAAGTGGAACACTACCAGTTCGGTCCCTTCAATCAAACATCTTACAACACGTTCACCCTCCTCGGCAAAGCCACGATCAACAAAGATGCTCTTCAGATCACGCCGGACACGGCCAACGGCAACTTCAGCATGAACAATAACTCAGGTAGAGTCTTATACAACCACTCCTTTGTCCTCTGGAACCCTGATCTCGACTCCACTACAACTTCACCGGACTACGTCGCCTCTTTCAACTCCTCCTTCCTCATTAACGTCTATCGTCCCAACAGCTCCGCTGCCCCAGGCGAGGGCCTTGCCTTTATCATAGCGCCGGATTTGACCATCCCGGAAAACAGCGCCGGACAGTATCTCGGTTTGACTAACTCCACCACCGACGGTGACGCCAACAACCAGTTGGTGGCAATCGAGCTCGACACTTTGAAGGAAGGGTTTGATCCGGACAGCAACCATATAGGGCTTAATATCAACTCCGTTAAGTCTAACGTAACGGTGCCGCTATGGGATTACGGAATCGAGATCGCTCCACCGGGGACGAAGTTTTACATGGTGTGGATCCAATACGACGGCGGCTCACATAACCTGTCGGTGTTCATGGCCAACCAGACTAGTGAATCGAATGCAGGGTTTAGTGGAGCGATCCGGCCCAGACCAACCATTCCAATTCTAACCGCCAACCTCAACCTCAAGGACATTGTGAATCAAAAGTCCTACTTCGGATTCGCGGCCTCCACCGGAAGCAACATCCAGCTCAACTGCGTGTTGAGGTGGAATCTAACGGTGGAGATTCTCTCGGATTTGGAAAGTGGAGGTGACAACAGTAAGGTGTTGAAGATAGCACTAGGGGTGGGTGCCGGGTTGGTTTTGGTGCTATTCTGCTTATTCGGGGCGGGTCATTATGTGTGCAAAAAGAGAAAGGCTAGGGCGTCGGACCCTAACATTTTGGGAGCCCTGAAGAGTCTTCCCGGAACACCGAGGGAGTTTAGTTACCGGGAATTGAAGAAAGCCACCAACAACTTCGACGACAAGCATAAATTAGGTCAAGGTGGGTTTGGGGTGGTGTACCGAGCTGTGTTAGCTAAGGAGAACAACCTTGAGGTGGCGGTGAAGATGTTCTCTAGGGACGAGGTCAAGGGCAGGGACGACTTTCTGGCCGAGCTCACCATCATTAACCGTCTCCGGCACAAACACCTCGTCCGGTTACTCGGTTGGTGCCACAAGAATGGGATGCTTCTCATTGTCTATGAGTACATGCCAAACGGCAGCTTGGACAACCACCTATTCTCCGGGCCGGAAAACGCGACCCTAGGATGGAGCCAAAGGTACAAGATTGTCTCGGGTGTGGCCTCGGCCTTACATTACCTCCACAATGAATATGATCAAAGAGTAGTCCACCGAGACCTCAAGGCTAGCAACATAATGCTCGATACCCACTTCAACGCGCGTTTGGGCGACTTTGGCCTAGCGCGCGCCCTGGACAATGAGAAGACCTCGTATGCTGAAATCGAAGGTATCCCGGGCACGATGGGGTACATTGCCCCTGAATGCTTCCACACGGGAAAAGCGACATGTGAGTCTGACGTGTATGGGTTCGGTGCCGTTGTTCTAGAAGTCGTGTGCGGTCAACGACCGTGGACTAAAATCGAAAGATACCAATTGTTAGTGGACTGGGTATGGTCGTTGCATAGAGAAGGCCGTCTTCTCGAGGCCATGGACGAGAGGTTGGGCAAGGACTACGTAGTTGAGGAGGCCCAAAGGCTTTTGCTTCTTGGGCTGGCTTGTTCGCATCCAATTGCGAACGAGAGGCCCAAGACACAAACCATAATCCAAATCATGTCCGGGTCGGTGCCGGTGCCCCGAGTCCCACCTTTCAAACCGTCTTTTGTGTGGCCTTCCATGCCGGAAGGAGTGAGCAGCATTGCCAACACGAATAACACGACGTCGTCTTGGCCTCTCGGAATGTCAGCTTCAGATAGGTCTGAGTGGAGCCCACATTTGGACAGCAGGGATAGCCTGGACCGGTATGGAGGTGCAAGAATATATAGCGACAGTTCTTCATTGGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase Pkinase_Tyr

Protein Analysis

708

Amino Acids

77.97

Weight (kDa)

6.04

Isoelectric Point (pI)

35.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 25 - 281 9.3e-59 Legume lectin domain
Pkinase PF00069 360 - 570 4.6e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 362 - 573 3.9e-49 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000688)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09820 FvH4_2g17160 FvH4_2g17160
malus_domestica MD02G1107100.v1.1 MD02G1107300.v1.1 MD05G1144900.v1.1 MD10G1144700.v1.1 MD15G1226500.v1.1
prunus_persica Prupe.7G188700_v2.0.a1 Prupe.7G188700_v2.0.a1 Prupe.7G188700_v2.0.a1 Prupe.8G183000_v2.0.a1
pyrus_communis pycom05g14000 pycom10g12440 pycom15g20140
rosa_chinensis RchiOBHm_Chr2g0096621 RchiOBHm_Chr6g0281601 RchiOBHm_Chr6g0281651 RchiOBHm_Chr7g0212121
rosa_laevigata RLG00000002926 RLG00000002927 RLG00000002933 RLG00000008638 RLG00000012954 RLG00000012955 RLG00000016656
rosa_multiflora Rmu_co8091766.1_g000001 Rmu_co8287847.1_g000001 Rmu_co8297221.1_g000001 Rmu_co8485327.1_g000001 Rmu_co8512767.1_g000001 Rmu_sc0002316.1_g000041 Rmu_sc0003565.1_g000009 Rmu_sc0014556.1_g000004 Rmu_sc0027573.1_g000001 Rmu_sc0030028.1_g000001
rosa_roxburghii Rroxscaffold_1G00026540 Rroxscaffold_2G00145470 Rroxscaffold_3G00247100 Rroxscaffold_3G00247110 Rroxscaffold_3G00247120 Rroxscaffold_5G00362680 Rroxscaffold_5G00362710 Rroxscaffold_7G00186950
rosa_rugosa Rorug02G0059000 Rorug02G0059100 Rorug06G0142300 Rorug07G0131000 Rorug07G0131100
rosa_samantha Rh1DG155700 Rh2AG106500 Rh2AG171500 Rh2BG108800 Rh2BG178900 Rh2CG110600 Rh2CG176400 Rh2DG110100 Rh2DG177600 Rh4BG120600 Rh6BG258300 Rh6CG257100 Rh6DG249200 Rh6DG249300 Rh7AG264100 Rh7AG264200 Rh7BG257800 Rh7BG257900 Rh7BG258000 Rh7BG258100 Rh7CG280600 Rh7CG280700 Rh7DG270600
rosa_wichuraiana Rw2G008240 Rw6G022110 Rw7G022540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1630
AatII GACGTC 1 cut(s) 2000
AccB1I GGYRCC 6 cut(s) 550, 908, 1269, 1652, 1903, 1909
AccB7I CCANNNNNTGG 1 cut(s) 457
AccII CGCG 7 cut(s) 56, 782, 1358, 1499, 1501, 1525, 1527
AccIII TCCGGA 1 cut(s) 496
AclWI GGATC 4 cut(s) 488, 607, 620, 691
AcoI YGGCCR 3 cut(s) 171, 654, 1209
AcuI CTGAAG 4 cut(s) 137, 169, 1031, 2010
AcyI GRCGYC 3 cut(s) 441, 983, 1997
AdeI CACNNNGTG 1 cut(s) 64
AfaI GTAC 4 cut(s) 1121, 1307, 1382, 1589
AfiI CCNNNNNNNGG 6 cut(s) 346, 347, 457, 1156, 1368, 2053
AflIII ACRYGT 3 cut(s) 108, 1625, 1638
AgeI ACCGGT 1 cut(s) 2076
AgsI TTSAA 7 cut(s) 91, 292, 481, 889, 1057, 1495, 1930
AhlI ACTAGT 1 cut(s) 665
AjiI CACGTC 1 cut(s) 1639
AjnI CCWGG 3 cut(s) 340, 1530, 2070
AjuI GAANNNNNNNTTGG 2 cut(s) 167, 199
AluBI AGCT 8 cut(s) 330, 469, 808, 1127, 1136, 1216, 1323, 2024
AluI AGCT 8 cut(s) 330, 469, 808, 1127, 1136, 1216, 1323, 2024
Alw21I GWGCWC 2 cut(s) 471, 1218
Alw26I GTCTC 3 cut(s) 1238, 1396, 1449
AlwI GGATC 4 cut(s) 488, 607, 620, 691
Ama87I CYCGRG 4 cut(s) 1393, 1573, 1760, 1914
Aor13HI TCCGGA 1 cut(s) 496
ApeKI GCWGC 4 cut(s) 31, 335, 1320, 1971
ArsI GACNNNNNNTTYG 2 cut(s) 1236, 1268
AsiGI ACCGGT 1 cut(s) 2076
Asp700I GAANNNNTTC 1 cut(s) 1169
AspA2I CCTAGG 1 cut(s) 1363
AspLEI GCGC 7 cut(s) 58, 370, 398, 1501, 1525, 1527, 1529
AspS9I GGNCC 8 cut(s) 83, 349, 702, 988, 1346, 1807, 1863, 2074
AsuC2I CCSGG 9 cut(s) 386, 588, 913, 1023, 1049, 1345, 1574, 1575, 1897
AsuHPI GGTGA 8 cut(s) 16, 40, 106, 261, 449, 881, 1174, 1210
AsuNHI GCTAGC 1 cut(s) 1466
AvaI CYCGRG 4 cut(s) 1393, 1573, 1760, 1914
AvaII GGWCC 3 cut(s) 83, 988, 2074
AvrII CCTAGG 1 cut(s) 1363
BaeGI GKGCMC 2 cut(s) 1580, 1914
BalI TGGCCA 1 cut(s) 656
BamHI GGATCC 1 cut(s) 612
BanI GGYRCC 6 cut(s) 550, 908, 1269, 1652, 1903, 1909
BanII GRGCYC 4 cut(s) 471, 1009, 1218, 2048
BbsI GAAGAC 3 cut(s) 1010, 1550, 1748
Bbv12I GWGCWC 2 cut(s) 471, 1218
BbvI GCAGC 4 cut(s) 18, 322, 1332, 1983
BccI CCATC 4 cut(s) 389, 1229, 1362, 1576
BceAI ACGGC 6 cut(s) 186, 193, 640, 1333, 1640, 1737
BcgI CGANNNNNNTGC 2 cut(s) 335, 369
BciT130I CCWGG 3 cut(s) 342, 1532, 2072
BciVI GTATCC 1 cut(s) 1580
BclI TGATCA 1 cut(s) 1435
BcnI CCSGG 9 cut(s) 386, 588, 913, 1023, 1049, 1345, 1574, 1575, 1897
BcoDI GTCTC 3 cut(s) 1238, 1396, 1449
BcuI ACTAGT 1 cut(s) 665
BfaI CTAG 8 cut(s) 666, 899, 978, 1176, 1364, 1467, 1520, 1664
BfoI RGCGCY 2 cut(s) 371, 399
BfuI GTATCC 1 cut(s) 1580
BisI GCNGC 9 cut(s) 32, 39, 42, 336, 554, 628, 783, 1321, 1972
BlnI CCTAGG 1 cut(s) 1363
BlsI GCNGC 9 cut(s) 33, 40, 43, 337, 555, 629, 784, 1322, 1973
Bme18I GGWCC 3 cut(s) 83, 988, 2074
BmeT110I CYCGRG 4 cut(s) 1393, 1573, 1760, 1914
BmgBI CACGTC 1 cut(s) 1639
BmgT120I GGNCC 8 cut(s) 83, 349, 702, 988, 1346, 1807, 1863, 2074
BmrI ACTGGG 1 cut(s) 1735
BmsI GCATC 3 cut(s) 136, 1275, 1852
BmtI GCTAGC 1 cut(s) 1470
BmuI ACTGGG 1 cut(s) 1735
BpiI GAAGAC 3 cut(s) 1010, 1550, 1748
BplI GAGNNNNNCTC 4 cut(s) 833, 865, 1532, 1564
Bpu10I CCTNAGC 1 cut(s) 1137
BpuEI CTTGAG 3 cut(s) 728, 1172, 1445
BpuMI CCSGG 9 cut(s) 386, 588, 913, 1023, 1049, 1345, 1574, 1575, 1897
BsaAI YACGTR 1 cut(s) 1795
BsaHI GRCGYC 3 cut(s) 441, 983, 1997
BsaI GGTCTC 1 cut(s) 1449
BsaWI WCCGGW 5 cut(s) 271, 496, 791, 1254, 2076
BsaXI ACNNNNNCTCC 6 cut(s) 209, 239, 1325, 1355, 1404, 1434
Bsc4I CCNNNNNNNGG 6 cut(s) 346, 347, 457, 1156, 1368, 2053
Bse118I RCCGGY 3 cut(s) 34, 1906, 2076
Bse1I ACTGG 3 cut(s) 76, 451, 1730
Bse3DI GCAATG 2 cut(s) 1590, 1974
BseAI TCCGGA 1 cut(s) 496
BseBI CCWGG 3 cut(s) 342, 1532, 2072
BseGI GGATG 5 cut(s) 381, 801, 1290, 1373, 1843
BseLI CCNNNNNNNGG 6 cut(s) 346, 347, 457, 1156, 1368, 2053
BseMI GCAATG 2 cut(s) 1590, 1974
BseMII CTCAG 2 cut(s) 216, 2028
BseNI ACTGG 3 cut(s) 76, 451, 1730
BsePI GCGCGC 2 cut(s) 1523, 1525
BseRI GAGGAG 3 cut(s) 110, 286, 1817
BseSI GKGCMC 2 cut(s) 1580, 1914
BseXI GCAGC 4 cut(s) 18, 322, 1332, 1983
Bsh1236I CGCG 7 cut(s) 56, 782, 1358, 1499, 1501, 1525, 1527
Bsh1285I CGRYCG 1 cut(s) 1688
BshNI GGYRCC 6 cut(s) 550, 908, 1269, 1652, 1903, 1909
BshTI ACCGGT 1 cut(s) 2076
BsiEI CGRYCG 1 cut(s) 1688
BsiHKAI GWGCWC 2 cut(s) 471, 1218
BsiHKCI CYCGRG 4 cut(s) 1393, 1573, 1760, 1914
BslFI GGGAC 6 cut(s) 69, 306, 604, 1193, 1211, 1904
BslI CCNNNNNNNGG 6 cut(s) 346, 347, 457, 1156, 1368, 2053
BsmAI GTCTC 3 cut(s) 1238, 1396, 1449
BsmBI CGTCTC 1 cut(s) 1238
BsmFI GGGAC 6 cut(s) 69, 306, 604, 1193, 1211, 1904
BsmI GAATGC 2 cut(s) 682, 1607
Bso31I GGTCTC 1 cut(s) 1449
BsoBI CYCGRG 4 cut(s) 1393, 1573, 1760, 1914
Bsp1286I GDGCHC 6 cut(s) 471, 1009, 1218, 1580, 1914, 2048
Bsp13I TCCGGA 1 cut(s) 496
Bsp143I GATC 8 cut(s) 135, 156, 247, 493, 576, 612, 696, 1435
Bsp19I CCATGG 1 cut(s) 1767
BspCNI CTCAG 2 cut(s) 215, 2029
BspEI TCCGGA 1 cut(s) 496
BspFNI CGCG 7 cut(s) 56, 782, 1358, 1499, 1501, 1525, 1527
BspOI GCTAGC 1 cut(s) 1470
BspPI GGATC 4 cut(s) 488, 607, 620, 691
BspQI GCTCTTC 1 cut(s) 156
BspT107I GGYRCC 6 cut(s) 550, 908, 1269, 1652, 1903, 1909
BspTNI GGTCTC 1 cut(s) 1449
BsrDI GCAATG 2 cut(s) 1590, 1974
BsrFI RCCGGY 3 cut(s) 34, 1906, 2076
BsrI ACTGG 3 cut(s) 76, 451, 1730
BssAI RCCGGY 3 cut(s) 34, 1906, 2076
BssHII GCGCGC 2 cut(s) 1523, 1525
BssMI GATC 8 cut(s) 135, 156, 247, 493, 576, 612, 696, 1435
BssNI GRCGYC 3 cut(s) 441, 983, 1997
BssT1I CCWWGG 2 cut(s) 1363, 1767
Bst2UI CCWGG 3 cut(s) 342, 1532, 2072
Bst4CI ACNGT 9 cut(s) 405, 437, 550, 838, 878, 1232, 1689, 1935, 2108
Bst6I CTCTTC 3 cut(s) 27, 156, 1007
BstACI GRCGYC 3 cut(s) 441, 983, 1997
BstBAI YACGTR 1 cut(s) 1795
BstC8I GCNNGC 5 cut(s) 36, 1468, 1525, 1527, 1833
BstDEI CTNAG 3 cut(s) 202, 1137, 2037
BstDSI CCRYGG 2 cut(s) 1688, 1767
BstF5I GGATG 5 cut(s) 381, 801, 1290, 1373, 1843
BstFNI CGCG 7 cut(s) 56, 782, 1358, 1499, 1501, 1525, 1527
BstH2I RGCGCY 2 cut(s) 371, 399
BstHHI GCGC 7 cut(s) 58, 370, 398, 1501, 1525, 1527, 1529
BstKTI GATC 8 cut(s) 138, 159, 250, 496, 579, 615, 699, 1438
BstMAI GTCTC 3 cut(s) 1238, 1396, 1449
BstMBI GATC 8 cut(s) 135, 156, 247, 493, 576, 612, 696, 1435
BstMCI CGRYCG 1 cut(s) 1688
BstMWI GCNNNNNNNGC 7 cut(s) 186, 1133, 1515, 1524, 1828, 1954, 2067
BstNI CCWGG 3 cut(s) 342, 1532, 2072
BstNSI RCATGY 2 cut(s) 1312, 1629
BstSLI GKGCMC 2 cut(s) 1580, 1914
BstSNI TACGTA 1 cut(s) 1795
BstUI CGCG 7 cut(s) 56, 782, 1358, 1499, 1501, 1525, 1527
BstV1I GCAGC 4 cut(s) 18, 322, 1332, 1983
BstV2I GAAGAC 3 cut(s) 1010, 1550, 1748
BstX2I RGATCY 1 cut(s) 612
BstXI CCANNNNNNTGG 1 cut(s) 1280
BstYI RGATCY 1 cut(s) 612
BsuI GTATCC 1 cut(s) 1580
BtgI CCRYGG 2 cut(s) 1688, 1767
BtrI CACGTC 1 cut(s) 1639
BtsCI GGATG 5 cut(s) 381, 801, 1290, 1373, 1843
Cac8I GCNNGC 5 cut(s) 36, 1468, 1525, 1527, 1833
CfoI GCGC 7 cut(s) 58, 370, 398, 1501, 1525, 1527, 1529
Cfr10I RCCGGY 3 cut(s) 34, 1906, 2076
Cfr13I GGNCC 8 cut(s) 83, 349, 702, 988, 1346, 1807, 1863, 2074
Cfr9I CCCGGG 1 cut(s) 1573
CseI GACGC 3 cut(s) 62, 449, 972
Csp6I GTAC 4 cut(s) 1120, 1306, 1381, 1588
CspAI ACCGGT 1 cut(s) 2076
CspCI CAANNNNNGTGG 2 cut(s) 1670, 1705
CviAII CATG 8 cut(s) 190, 604, 652, 1309, 1626, 1768, 1891, 1954
CviQI GTAC 4 cut(s) 1120, 1306, 1381, 1588
DdeI CTNAG 3 cut(s) 202, 1137, 2037
DpnI GATC 8 cut(s) 137, 158, 249, 495, 578, 614, 698, 1437
DpnII GATC 8 cut(s) 135, 156, 247, 493, 576, 612, 696, 1435
DraIII CACNNNGTG 1 cut(s) 64
DrdI GACNNNNNNGTC 1 cut(s) 1630
DseDI GACNNNNNNGTC 1 cut(s) 1630
EaeI YGGCCR 3 cut(s) 171, 654, 1209
Eam1104I CTCTTC 3 cut(s) 27, 156, 1007
EarI CTCTTC 3 cut(s) 27, 156, 1007
Ecl136II GAGCTC 2 cut(s) 469, 1216
Eco105I TACGTA 1 cut(s) 1795
Eco130I CCWWGG 2 cut(s) 1363, 1767
Eco24I GRGCYC 4 cut(s) 471, 1009, 1218, 2048
Eco31I GGTCTC 1 cut(s) 1449
Eco47I GGWCC 3 cut(s) 83, 988, 2074
Eco53kI GAGCTC 2 cut(s) 469, 1216
Eco57I CTGAAG 4 cut(s) 137, 169, 1031, 2010
Eco88I CYCGRG 4 cut(s) 1393, 1573, 1760, 1914
EcoICRI GAGCTC 2 cut(s) 469, 1216
EcoO109I RGGNCCY 1 cut(s) 349
EcoRII CCWGG 3 cut(s) 340, 1530, 2070
EcoT14I CCWWGG 2 cut(s) 1363, 1767
EcoT38I GRGCYC 4 cut(s) 471, 1009, 1218, 2048
ErhI CCWWGG 2 cut(s) 1363, 1767
Esp3I CGTCTC 1 cut(s) 1238
FaeI CATG 8 cut(s) 193, 607, 655, 1312, 1629, 1771, 1894, 1957
FalI AAGNNNNNCTT 6 cut(s) 135, 167, 755, 787, 1740, 1772
FaqI GGGAC 6 cut(s) 69, 306, 604, 1193, 1211, 1904
FatI CATG 8 cut(s) 189, 603, 651, 1308, 1625, 1767, 1890, 1953
FauI CCCGC 1 cut(s) 940
FbaI TGATCA 1 cut(s) 1435
Fnu4HI GCNGC 9 cut(s) 32, 39, 42, 336, 554, 628, 783, 1321, 1972
FokI GGATG 5 cut(s) 368, 788, 1297, 1380, 1830
FriOI GRGCYC 4 cut(s) 471, 1009, 1218, 2048
Fsp4HI GCNGC 9 cut(s) 32, 39, 42, 336, 554, 628, 783, 1321, 1972
FspBI CTAG 8 cut(s) 666, 899, 978, 1176, 1364, 1467, 1520, 1664
GlaI GCGC 7 cut(s) 57, 369, 397, 1500, 1524, 1526, 1528
GluI GCNGC 9 cut(s) 32, 39, 42, 336, 554, 628, 783, 1321, 1972
HaeII RGCGCY 2 cut(s) 371, 399
HgaI GACGC 3 cut(s) 62, 449, 972
HhaI GCGC 7 cut(s) 58, 370, 398, 1501, 1525, 1527, 1529
Hin1I GRCGYC 3 cut(s) 441, 983, 1997
Hin1II CATG 8 cut(s) 193, 607, 655, 1312, 1629, 1771, 1894, 1957
Hin6I GCGC 7 cut(s) 56, 368, 396, 1499, 1523, 1525, 1527
HinP1I GCGC 7 cut(s) 56, 368, 396, 1499, 1523, 1525, 1527
HincII GTYRAC 1 cut(s) 1682
HindII GTYRAC 1 cut(s) 1682
HphI GGTGA 8 cut(s) 16, 40, 106, 261, 449, 881, 1174, 1210
Hpy166II GTNNAC 6 cut(s) 114, 1120, 1450, 1682, 1692, 1723
Hpy188I TCNGA 8 cut(s) 156, 776, 853, 988, 1636, 2015, 2029, 2038
Hpy188III TCNNGA 6 cut(s) 238, 251, 497, 574, 1664, 1760
Hpy8I GTNNAC 6 cut(s) 114, 1120, 1450, 1682, 1692, 1723
Hpy99I CGWCG 8 cut(s) 56, 284, 437, 626, 988, 1082, 1999, 2002
HpyAV CCTTC 8 cut(s) 97, 310, 475, 479, 1559, 1742, 1955, 1959
HpyCH4III ACNGT 9 cut(s) 405, 437, 550, 838, 878, 1232, 1689, 1935, 2108
HpyCH4IV ACGT 7 cut(s) 110, 279, 312, 543, 1638, 1794, 1997
HpyCH4V TGCA 4 cut(s) 680, 963, 1741, 2090
HpyF10VI GCNNNNNNNGC 7 cut(s) 186, 1133, 1515, 1524, 1828, 1954, 2067
HpyF3I CTNAG 3 cut(s) 202, 1137, 2037
HpySE526I ACGT 7 cut(s) 110, 279, 312, 543, 1638, 1794, 1997
Hsp92I GRCGYC 3 cut(s) 441, 983, 1997
Hsp92II CATG 8 cut(s) 193, 607, 655, 1312, 1629, 1771, 1894, 1957
HspAI GCGC 7 cut(s) 56, 368, 396, 1499, 1523, 1525, 1527
Kpn2I TCCGGA 1 cut(s) 496
KroI GCCGGC 1 cut(s) 34
KroNI GCCGGC 1 cut(s) 36
Ksp22I TGATCA 1 cut(s) 1435
Kzo9I GATC 8 cut(s) 135, 156, 247, 493, 576, 612, 696, 1435
LguI GCTCTTC 1 cut(s) 156
LmnI GCTCC 6 cut(s) 335, 586, 692, 1004, 1371, 2043
Lsp1109I GCAGC 4 cut(s) 18, 322, 1332, 1983
LweI GCATC 3 cut(s) 136, 1275, 1852
MaeI CTAG 8 cut(s) 666, 899, 978, 1176, 1364, 1467, 1520, 1664
MaeII ACGT 7 cut(s) 110, 279, 312, 543, 1638, 1794, 1997
MaeIII GTNAC 5 cut(s) 437, 544, 869, 1043, 1257
MalI GATC 8 cut(s) 137, 158, 249, 495, 578, 614, 698, 1437
MboI GATC 8 cut(s) 135, 156, 247, 493, 576, 612, 696, 1435
MfeI CAATTG 2 cut(s) 1712, 1848
MflI RGATCY 1 cut(s) 612
MhlI GDGCHC 6 cut(s) 471, 1009, 1218, 1580, 1914, 2048
MlsI TGGCCA 1 cut(s) 656
MluCI AATT 5 cut(s) 720, 1052, 1091, 1712, 1848
MluNI TGGCCA 1 cut(s) 656
MlyI GAGTC 5 cut(s) 219, 248, 1024, 1640, 1926
MmeI TCCRAC 1 cut(s) 966
Mox20I TGGCCA 1 cut(s) 656
MroI TCCGGA 1 cut(s) 496
MroNI GCCGGC 1 cut(s) 34
MroXI GAANNNNTTC 1 cut(s) 1169
MscI TGGCCA 1 cut(s) 656
MseI TTAA 5 cut(s) 309, 519, 534, 1227, 2122
MslI CAYNNNNRTG 1 cut(s) 1278
Msp20I TGGCCA 1 cut(s) 656
MspA1I CMGCKG 1 cut(s) 335
MunI CAATTG 2 cut(s) 1712, 1848
Mva1269I GAATGC 2 cut(s) 682, 1607
MvaI CCWGG 3 cut(s) 342, 1532, 2072
MvnI CGCG 7 cut(s) 56, 782, 1358, 1499, 1501, 1525, 1527
MwoI GCNNNNNNNGC 7 cut(s) 186, 1133, 1515, 1524, 1828, 1954, 2067
NaeI GCCGGC 1 cut(s) 36
NciI CCSGG 9 cut(s) 386, 588, 913, 1023, 1049, 1345, 1574, 1575, 1897
NcoI CCATGG 1 cut(s) 1767
NdeII GATC 8 cut(s) 135, 156, 247, 493, 576, 612, 696, 1435
NgoMIV GCCGGC 1 cut(s) 34
NheI GCTAGC 1 cut(s) 1466
NlaIII CATG 8 cut(s) 193, 607, 655, 1312, 1629, 1771, 1894, 1957
NmeAIII GCCGAG 3 cut(s) 102, 1237, 1385
NmuCI GTSAC 2 cut(s) 437, 869
NspI RCATGY 2 cut(s) 1312, 1629
PaeR7I CTCGAG 1 cut(s) 1760
PauI GCGCGC 2 cut(s) 1523, 1525
PciI ACATGT 1 cut(s) 1625
PciSI GCTCTTC 1 cut(s) 156
PcsI WCGNNNNNNNCGW 2 cut(s) 1619, 1991
PctI GAATGC 2 cut(s) 682, 1607
PdiI GCCGGC 1 cut(s) 36
PdmI GAANNNNTTC 1 cut(s) 1169
PfeI GAWTC 7 cut(s) 7, 570, 671, 757, 777, 829, 844
PflFI GACNNNGTC 3 cut(s) 278, 1184, 1999
PflMI CCANNNNNTGG 1 cut(s) 457
PfoI TCCNGGA 2 cut(s) 384, 1021
PinAI ACCGGT 1 cut(s) 2076
PkrI GCNGC 9 cut(s) 33, 40, 43, 337, 555, 629, 784, 1322, 1973
PleI GAGTC 5 cut(s) 218, 248, 1023, 1639, 1925
PpsI GAGTC 5 cut(s) 218, 248, 1023, 1639, 1925
Ppu21I YACGTR 1 cut(s) 1795
PscI ACATGT 1 cut(s) 1625
Psp124BI GAGCTC 2 cut(s) 471, 1218
Psp6I CCWGG 3 cut(s) 340, 1530, 2070
PspGI CCWGG 3 cut(s) 340, 1530, 2070
PspPI GGNCC 8 cut(s) 83, 349, 702, 988, 1346, 1807, 1863, 2074
PsuI RGATCY 1 cut(s) 612
PsyI GACNNNGTC 3 cut(s) 278, 1184, 1999
PteI GCGCGC 2 cut(s) 1523, 1525
RsaI GTAC 4 cut(s) 1121, 1307, 1382, 1589
RsaNI GTAC 4 cut(s) 1120, 1306, 1381, 1588
RseI CAYNNNNRTG 1 cut(s) 1278
SacI GAGCTC 2 cut(s) 471, 1218
SapI GCTCTTC 1 cut(s) 156
SaqAI TTAA 5 cut(s) 309, 519, 534, 1227, 2122
SatI GCNGC 9 cut(s) 32, 39, 42, 336, 554, 628, 783, 1321, 1972
Sau3AI GATC 8 cut(s) 135, 156, 247, 493, 576, 612, 696, 1435
Sau96I GGNCC 8 cut(s) 83, 349, 702, 988, 1346, 1807, 1863, 2074
SchI GAGTC 5 cut(s) 219, 248, 1024, 1640, 1926
SduI GDGCHC 6 cut(s) 471, 1009, 1218, 1580, 1914, 2048
SfaNI GCATC 3 cut(s) 136, 1275, 1852
Sfr274I CTCGAG 1 cut(s) 1760
SinI GGWCC 3 cut(s) 83, 988, 2074
SlaI CTCGAG 1 cut(s) 1760
SmaI CCCGGG 1 cut(s) 1575
SmiMI CAYNNNNRTG 1 cut(s) 1278
SmlI CTYRAG 4 cut(s) 743, 1151, 1460, 1760
SmoI CTYRAG 4 cut(s) 743, 1151, 1460, 1760
SnaBI TACGTA 1 cut(s) 1795
SpeI ACTAGT 1 cut(s) 665
Sse9I AATT 5 cut(s) 720, 1052, 1091, 1712, 1848
SspMI CTAG 8 cut(s) 666, 899, 978, 1176, 1364, 1467, 1520, 1664
SstI GAGCTC 2 cut(s) 471, 1218
StyI CCWWGG 2 cut(s) 1363, 1767
TaaI ACNGT 9 cut(s) 405, 437, 550, 838, 878, 1232, 1689, 1935, 2108
TaiI ACGT 7 cut(s) 113, 282, 315, 546, 1641, 1797, 2000
TaqII GACCGA 1 cut(s) 71
TasI AATT 5 cut(s) 720, 1052, 1091, 1712, 1848
TatI WGTACW 1 cut(s) 1305
TauI GCSGC 5 cut(s) 41, 44, 556, 630, 785
TfiI GAWTC 7 cut(s) 7, 570, 671, 757, 777, 829, 844
Tru1I TTAA 5 cut(s) 309, 519, 534, 1227, 2122
Tru9I TTAA 5 cut(s) 309, 519, 534, 1227, 2122
TseFI GTSAC 2 cut(s) 437, 869
TseI GCWGC 4 cut(s) 31, 335, 1320, 1971
Tsp45I GTSAC 2 cut(s) 437, 869
TspDTI ATGAA 4 cut(s) 206, 640, 1443, 2103
TspGWI ACGGA 2 cut(s) 520, 582
TspMI CCCGGG 1 cut(s) 1573
Tth111I GACNNNGTC 3 cut(s) 278, 1184, 1999
Van91I CCANNNNNTGG 1 cut(s) 457
VpaK11BI GGWCC 3 cut(s) 83, 988, 2074
XbaI TCTAGA 1 cut(s) 1663
XceI RCATGY 2 cut(s) 1312, 1629
XcmI CCANNNNNNNNNTGG 1 cut(s) 451
XhoI CTCGAG 1 cut(s) 1760
XmaI CCCGGG 1 cut(s) 1573
XmaJI CCTAGG 1 cut(s) 1363
XmnI GAANNNNTTC 1 cut(s) 1169
XspI CTAG 8 cut(s) 666, 899, 978, 1176, 1364, 1467, 1520, 1664
ZraI GACGTC 1 cut(s) 1998
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.