Rh2BG178900
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
15888501 .. 15890870
2370 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG178900.1

Sequence Viewer

Length: 1023 bp
ATGGCACTGGACTTGATAGCAGGAGCAGCATTTGGGGCGTTGTATGACCGTGTTTCGCGAGCGGTGGACAAGAAGGTGGCGTTGAAAGACAGTCTCAAAGATATGAAACGCACATTGGAGTCCTTAAGAGGACAGGCCGGAATCATTCGAGGGATACGAGAGTTCAACGAGGAACTGAGTCTCCCAAACGATGGTATAGATGATCTTGAAACACAAATGATTGAAGGCGAAAAACTCATTTGCAGGTTGTCTTGTCTTGGTATCTACACCTACTGCTGCACAAGTGGTTGTGCTGAGCAGCTTGATGAATTGAATAGGTGTCTGGAAAGACTCTTGGAAACCTTGATGTTGCAGCAAGCAAGAGATGTGAAGGAGATCTTGAAAGGGTCAAGGCAAACCCGTGATGATGTTGATGAAATAAGGCAAATGATGAAGAAGATACTACTCCATATTGAAGGGGATTCGGTGGAGTCTCCAGCTTCAGAAACCACTACAGAGAATGAAGGAAATGGCGAGGAACAAGTGGCATCATTAGAAGGACGAGTGGAAGCAGCATTTCTTGCCCTGTTTGGTATTGTTTTGGAAGTGAAGGACAAGAATGTGATGTATAGACCACTTATGGGATCTATCAAATCCAGTCTGGACTGCTTAAAGCCATTGATCGAAGACATGGCACAAGAAAACAGGGTCCTGGATCGTCCAGTTAAGGAACTAGAGTATTTCAGAATGCATATGGAGAAAGGTGCAGAGCTAGTCCGCAAGTGCTCCAAAAATGGTGTGTGCGCCAAATACAAAAAGAAGAAATACACCAACCAACTTCTTGAGTTGGATGCATGTCTTCAGAGGCAGTTCAATGTACTGAGAGCGCAGGTTGCAAGCGATGTGAGGGAGACCACAGCTTCGATAAAGAGTATACAGAAGGTGATCAAGCGAATTGAGGAGAGTGGTGTCATGAAGAATCAAATGGAAATGAATGGTCCGTGTGAAGTAGTTGAGGCTTCATCCCCTGATGAACAGAAATGA

Protein Analysis

340

Amino Acids

38.32

Weight (kDa)

5.33

Isoelectric Point (pI)

38.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 6 - 138 3e-13 Arabidopsis broad-spectrum mildew resistance protein RPW8
RPW8 PF05659 183 - 310 1.1e-18 Arabidopsis broad-spectrum mildew resistance protein RPW8
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000688)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 234, 859
AccB7I CCANNNNNTGG 1 cut(s) 191
AccBSI CCGCTC 1 cut(s) 62
AccI GTMKAC 1 cut(s) 913
AccII CGCG 1 cut(s) 58
AciI CCGC 2 cut(s) 62, 757
AclWI GGATC 2 cut(s) 631, 702
AcuI CTGAAG 2 cut(s) 465, 824
AfaI GTAC 1 cut(s) 858
AfiI CCNNNNNNNGG 2 cut(s) 191, 620
AflII CTTAAG 1 cut(s) 124
AgsI TTSAA 8 cut(s) 85, 166, 209, 224, 313, 382, 455, 853
AjnI CCWGG 1 cut(s) 690
AjuI GAANNNNNNNTTGG 2 cut(s) 98, 130
AloI GAACNNNNNNTCC 2 cut(s) 165, 197
AluBI AGCT 4 cut(s) 301, 479, 751, 899
AluI AGCT 4 cut(s) 301, 479, 751, 899
Alw21I GWGCWC 1 cut(s) 767
Alw26I GTCTC 4 cut(s) 98, 185, 477, 884
AlwI GGATC 2 cut(s) 631, 702
AoxI GGCC 1 cut(s) 135
ApeKI GCWGC 5 cut(s) 26, 276, 298, 352, 551
ArsI GACNNNNNNTTYG 2 cut(s) 883, 915
AspLEI GCGC 2 cut(s) 785, 868
AspS9I GGNCC 2 cut(s) 688, 977
AsuHPI GGTGA 1 cut(s) 934
AvaII GGWCC 2 cut(s) 688, 977
BaeI ACNNNNGTAYC 2 cut(s) 146, 179
BbsI GAAGAC 2 cut(s) 672, 830
Bbv12I GWGCWC 1 cut(s) 767
BbvI GCAGC 5 cut(s) 38, 263, 310, 364, 563
BccI CCATC 1 cut(s) 185
BciT130I CCWGG 1 cut(s) 692
BciVI GTATCC 1 cut(s) 147
BclI TGATCA 1 cut(s) 924
BcoDI GTCTC 4 cut(s) 98, 185, 477, 884
BfaI CTAG 2 cut(s) 713, 752
BfmI CTRYAG 1 cut(s) 492
BfrI CTTAAG 1 cut(s) 124
BfuAI ACCTGC 2 cut(s) 234, 859
BfuI GTATCC 1 cut(s) 147
BglII AGATCT 1 cut(s) 375
BisI GCNGC 5 cut(s) 27, 277, 299, 353, 552
BlpI GCTNAGC 1 cut(s) 294
BlsI GCNGC 5 cut(s) 28, 278, 300, 354, 553
Bme1390I CCNGG 1 cut(s) 692
Bme18I GGWCC 2 cut(s) 688, 977
BmgT120I GGNCC 2 cut(s) 688, 977
BmiI GGNNCC 1 cut(s) 689
BmrFI CCNGG 1 cut(s) 692
BmsI GCATC 2 cut(s) 536, 820
BpiI GAAGAC 2 cut(s) 672, 830
BpmI CTGGAG 1 cut(s) 459
Bpu1102I GCTNAGC 1 cut(s) 294
BpuEI CTTGAG 1 cut(s) 842
BsaI GGTCTC 1 cut(s) 884
BsaXI ACNNNNNCTCC 2 cut(s) 165, 195
Bsc4I CCNNNNNNNGG 2 cut(s) 191, 620
Bse1I ACTGG 3 cut(s) 12, 636, 701
BseBI CCWGG 1 cut(s) 692
BseGI GGATG 2 cut(s) 835, 1001
BseLI CCNNNNNNNGG 2 cut(s) 191, 620
BseMII CTCAG 3 cut(s) 167, 285, 851
BseNI ACTGG 3 cut(s) 12, 636, 701
BseRI GAGGAG 1 cut(s) 953
BseXI GCAGC 5 cut(s) 38, 263, 310, 364, 563
BsgI GTGCAG 2 cut(s) 262, 765
Bsh1236I CGCG 1 cut(s) 58
BshFI GGCC 1 cut(s) 137
BsiHKAI GWGCWC 1 cut(s) 767
BsiSI CCGG 1 cut(s) 138
BslI CCNNNNNNNGG 2 cut(s) 191, 620
BsmAI GTCTC 4 cut(s) 98, 185, 477, 884
BsmI GAATGC 1 cut(s) 732
BsnI GGCC 1 cut(s) 137
Bso31I GGTCTC 1 cut(s) 884
Bsp1286I GDGCHC 1 cut(s) 767
Bsp143I GATC 6 cut(s) 202, 375, 623, 660, 694, 924
Bsp1720I GCTNAGC 1 cut(s) 294
Bsp68I TCGCGA 1 cut(s) 58
BspACI CCGC 2 cut(s) 62, 757
BspANI GGCC 1 cut(s) 137
BspCNI CTCAG 3 cut(s) 168, 286, 852
BspFNI CGCG 1 cut(s) 58
BspHI TCATGA 1 cut(s) 951
BspLI GGNNCC 1 cut(s) 689
BspMI ACCTGC 2 cut(s) 234, 859
BspPI GGATC 2 cut(s) 631, 702
BspTI CTTAAG 1 cut(s) 124
BspTNI GGTCTC 1 cut(s) 884
BsrBI CCGCTC 1 cut(s) 62
BsrI ACTGG 3 cut(s) 12, 636, 701
BssMI GATC 6 cut(s) 202, 375, 623, 660, 694, 924
BssNAI GTATAC 1 cut(s) 914
Bst1107I GTATAC 1 cut(s) 914
Bst2UI CCWGG 1 cut(s) 692
Bst4CI ACNGT 2 cut(s) 50, 92
BstAFI CTTAAG 1 cut(s) 124
BstAPI GCANNNNNTGC 1 cut(s) 560
BstC8I GCNNGC 3 cut(s) 60, 357, 877
BstDEI CTNAG 3 cut(s) 176, 294, 860
BstF5I GGATG 2 cut(s) 835, 1001
BstFNI CGCG 1 cut(s) 58
BstHHI GCGC 2 cut(s) 785, 868
BstKTI GATC 6 cut(s) 205, 378, 626, 663, 697, 927
BstMAI GTCTC 4 cut(s) 98, 185, 477, 884
BstMBI GATC 6 cut(s) 202, 375, 623, 660, 694, 924
BstMWI GCNNNNNNNGC 4 cut(s) 26, 35, 560, 872
BstNI CCWGG 1 cut(s) 692
BstNSI RCATGY 1 cut(s) 837
BstSCI CCNGG 1 cut(s) 690
BstSFI CTRYAG 1 cut(s) 492
BstUI CGCG 1 cut(s) 58
BstV1I GCAGC 5 cut(s) 38, 263, 310, 364, 563
BstV2I GAAGAC 2 cut(s) 672, 830
BstX2I RGATCY 2 cut(s) 375, 623
BstYI RGATCY 2 cut(s) 375, 623
BstZ17I GTATAC 1 cut(s) 914
BsuI GTATCC 1 cut(s) 147
BsuRI GGCC 1 cut(s) 137
BtgZI GCGATG 1 cut(s) 894
BtsCI GGATG 2 cut(s) 835, 1001
BtsIMutI CAGTG 1 cut(s) 5
BtuMI TCGCGA 1 cut(s) 58
BveI ACCTGC 2 cut(s) 234, 859
Cac8I GCNNGC 3 cut(s) 60, 357, 877
CciI TCATGA 1 cut(s) 951
CfoI GCGC 2 cut(s) 785, 868
Cfr13I GGNCC 2 cut(s) 688, 977
Csp6I GTAC 1 cut(s) 857
CviAII CATG 3 cut(s) 670, 834, 952
CviJI RGCY 7 cut(s) 137, 301, 479, 655, 751, 899, 998
CviKI_1 RGCY 7 cut(s) 137, 301, 479, 655, 751, 899, 998
CviQI GTAC 1 cut(s) 857
DdeI CTNAG 3 cut(s) 176, 294, 860
DpnI GATC 6 cut(s) 204, 377, 625, 662, 696, 926
DpnII GATC 6 cut(s) 202, 375, 623, 660, 694, 924
Eco31I GGTCTC 1 cut(s) 884
Eco47I GGWCC 2 cut(s) 688, 977
Eco57I CTGAAG 2 cut(s) 465, 824
EcoO109I RGGNCCY 1 cut(s) 688
EcoRII CCWGG 1 cut(s) 690
EcoT22I ATGCAT 2 cut(s) 732, 835
FaeI CATG 3 cut(s) 673, 837, 955
FalI AAGNNNNNCTT 2 cut(s) 362, 394
FatI CATG 3 cut(s) 669, 833, 951
FauNDI CATATG 1 cut(s) 732
FbaI TGATCA 1 cut(s) 924
FblI GTMKAC 1 cut(s) 913
Fnu4HI GCNGC 5 cut(s) 27, 277, 299, 353, 552
FokI GGATG 2 cut(s) 842, 988
Fsp4HI GCNGC 5 cut(s) 27, 277, 299, 353, 552
FspBI CTAG 2 cut(s) 713, 752
GlaI GCGC 2 cut(s) 784, 867
GluI GCNGC 5 cut(s) 27, 277, 299, 353, 552
GsuI CTGGAG 1 cut(s) 459
HaeIII GGCC 1 cut(s) 137
HapII CCGG 1 cut(s) 138
HhaI GCGC 2 cut(s) 785, 868
Hin1II CATG 3 cut(s) 673, 837, 955
Hin6I GCGC 2 cut(s) 783, 866
HinP1I GCGC 2 cut(s) 783, 866
HinfI GANTC 7 cut(s) 119, 141, 178, 330, 461, 470, 958
HpaII CCGG 1 cut(s) 138
HphI GGTGA 1 cut(s) 934
Hpy166II GTNNAC 2 cut(s) 67, 914
Hpy188I TCNGA 3 cut(s) 484, 725, 843
Hpy188III TCNNGA 7 cut(s) 57, 206, 323, 379, 641, 821, 952
Hpy8I GTNNAC 2 cut(s) 67, 914
HpyAV CCTTC 8 cut(s) 67, 218, 364, 449, 497, 530, 583, 913
HpyCH4III ACNGT 2 cut(s) 50, 92
HpyCH4V TGCA 7 cut(s) 243, 279, 352, 730, 746, 833, 875
HpyF10VI GCNNNNNNNGC 4 cut(s) 26, 35, 560, 872
HpyF3I CTNAG 3 cut(s) 176, 294, 860
Hsp92II CATG 3 cut(s) 673, 837, 955
HspAI GCGC 2 cut(s) 783, 866
Ksp22I TGATCA 1 cut(s) 924
Kzo9I GATC 6 cut(s) 202, 375, 623, 660, 694, 924
LmnI GCTCC 2 cut(s) 23, 770
Lsp1109I GCAGC 5 cut(s) 38, 263, 310, 364, 563
LweI GCATC 2 cut(s) 536, 820
MaeI CTAG 2 cut(s) 713, 752
MalI GATC 6 cut(s) 204, 377, 625, 662, 696, 926
MbiI CCGCTC 1 cut(s) 62
MboI GATC 6 cut(s) 202, 375, 623, 660, 694, 924
MboII GAAGA 6 cut(s) 445, 448, 677, 811, 830, 967
MflI RGATCY 2 cut(s) 375, 623
MhlI GDGCHC 1 cut(s) 767
MluCI AATT 2 cut(s) 308, 933
MlyI GAGTC 4 cut(s) 128, 187, 324, 479
MmeI TCCRAC 1 cut(s) 807
MnlI CCTC 8 cut(s) 122, 143, 163, 508, 837, 879, 931, 988
Mph1103I ATGCAT 2 cut(s) 732, 835
MseI TTAA 3 cut(s) 125, 650, 705
MspCI CTTAAG 1 cut(s) 124
MspI CCGG 1 cut(s) 138
MspR9I CCNGG 1 cut(s) 692
Mva1269I GAATGC 1 cut(s) 732
MvaI CCWGG 1 cut(s) 692
MvnI CGCG 1 cut(s) 58
MwoI GCNNNNNNNGC 4 cut(s) 26, 35, 560, 872
NdeI CATATG 1 cut(s) 732
NdeII GATC 6 cut(s) 202, 375, 623, 660, 694, 924
NlaIII CATG 3 cut(s) 673, 837, 955
NlaIV GGNNCC 1 cut(s) 689
NruI TCGCGA 1 cut(s) 58
NsiI ATGCAT 2 cut(s) 732, 835
NspI RCATGY 1 cut(s) 837
PagI TCATGA 1 cut(s) 951
PcsI WCGNNNNNNNCGW 1 cut(s) 154
PctI GAATGC 1 cut(s) 732
PfeI GAWTC 3 cut(s) 141, 461, 958
PflMI CCANNNNNTGG 1 cut(s) 191
PfoI TCCNGGA 1 cut(s) 690
PkrI GCNGC 5 cut(s) 28, 278, 300, 354, 553
PleI GAGTC 4 cut(s) 127, 186, 324, 478
PpsI GAGTC 4 cut(s) 127, 186, 324, 478
PpuMI RGGWCCY 1 cut(s) 688
Psp5II RGGWCCY 1 cut(s) 688
Psp6I CCWGG 1 cut(s) 690
PspGI CCWGG 1 cut(s) 690
PspN4I GGNNCC 1 cut(s) 689
PspPI GGNCC 2 cut(s) 688, 977
PspPPI RGGWCCY 1 cut(s) 688
PsuI RGATCY 2 cut(s) 375, 623
RruI TCGCGA 1 cut(s) 58
RsaI GTAC 1 cut(s) 858
RsaNI GTAC 1 cut(s) 857
SaqAI TTAA 3 cut(s) 125, 650, 705
SatI GCNGC 5 cut(s) 27, 277, 299, 353, 552
Sau3AI GATC 6 cut(s) 202, 375, 623, 660, 694, 924
Sau96I GGNCC 2 cut(s) 688, 977
SchI GAGTC 4 cut(s) 128, 187, 324, 479
ScrFI CCNGG 1 cut(s) 692
SduI GDGCHC 1 cut(s) 767
SfaNI GCATC 2 cut(s) 536, 820
SfcI CTRYAG 1 cut(s) 492
SinI GGWCC 2 cut(s) 688, 977
SmlI CTYRAG 2 cut(s) 124, 821
SmoI CTYRAG 2 cut(s) 124, 821
Sse9I AATT 2 cut(s) 308, 933
SsiI CCGC 2 cut(s) 62, 757
SspMI CTAG 2 cut(s) 713, 752
StyD4I CCNGG 1 cut(s) 690
TaaI ACNGT 2 cut(s) 50, 92
TaqI TCGA 3 cut(s) 148, 663, 902
TasI AATT 2 cut(s) 308, 933
TatI WGTACW 1 cut(s) 856
TfiI GAWTC 3 cut(s) 141, 461, 958
Tru1I TTAA 3 cut(s) 125, 650, 705
Tru9I TTAA 3 cut(s) 125, 650, 705
TscAI CASTG 1 cut(s) 12
TseI GCWGC 5 cut(s) 26, 276, 298, 352, 551
TspDTI ATGAA 8 cut(s) 119, 321, 429, 446, 516, 968, 986, 990
TspGWI ACGGA 1 cut(s) 969
TspRI CASTG 1 cut(s) 12
Van91I CCANNNNNTGG 1 cut(s) 191
Vha464I CTTAAG 1 cut(s) 124
VpaK11BI GGWCC 2 cut(s) 688, 977
XceI RCATGY 1 cut(s) 837
XmiI GTMKAC 1 cut(s) 913
XspI CTAG 2 cut(s) 713, 752
Zsp2I ATGCAT 2 cut(s) 732, 835
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.