Rroxscaffold_2G00145470

L-type lectin-domain containing receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000688
Physical Location & Seq
Forward (+)
83392469 .. 83395653
3185 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00145470.1

Sequence Viewer

Length: 2130 bp
ATGGTGATTCTGTTTCTCTCCCTTCTGTTGTTGCCGGCGGCGTCTTTCACCGACGCTCAGACCTACAAGGTGAAACCCTACCAGTTCGGTCCCTTCGATCAAACATATTACGACACGTTCGCGGTCCTCGGCTCCTCCTCGATCAACTTAAAAGCTCTTCAGATCACGCCGGACTCCGCCAATGGCAACATCAGCATGACCAACAACTCAGGTAGGATCTTGTACAACCACTCTTTCACCCTCTGGAACTCTGATCTCGACTCTTCTTCTCCGGGATACGTCGCCTCTTTCAACTCGTCCTTCCTCATTAACGTCTATCGTCTCAATGGCTCCGCCGTCCCCGGAGAGGGCATCGCCTTCATTATAGCCCCGGATTTGACCATCCCAGCAAACAGCGCCGGTCAATATCTCGGTTTGACCAACGCCACCACCGACGGTAACCCCACCAATCACTTGGTGGCAATTGAGCTCGACACTTTGAAGGAGGGCTTCGATCCGGACGCCAACCACATGGGGCTGAATATCAACTCGGTTAAGTCTAACAAGACGGTGCCACTTTCGGATTACGGAATCGAGATCGCGCCACCAGGCACGGAGTTTTATATGGTGTGGATCCAATACGACGGTGGGTCACATAATCTGTCGGTGTTCATGGCCAACCAGACCGATCAGAACAAGGACGGGAAGGGAGCGTTTGTTAATATCCGGCCTCGGCCTACCAGCCCAATTCTAACCGCCAACCTTAACCTCAAGGACATTGTCAACCAAAAGTCCTACTTCGGATTCGCAGCTTCCACCGGGAGTTACAGCCAGCTCAACTGCGTGTTGATGTGGAATCTAACGGTGGAGATTCTGCCGGACGTGGAAGGTGGAGGGGACAACGATAAGGTGTGGAAGATAGCACTAGGGGTGGGTGCCGGGTTGGTTTTGGTCCTATTGTGTTTATTCGGGGTGGGTTGTTATGTGCACAAAAGGCGAAAGGCTAAGGCGTCGGACCCTAACATTTTGGGCGCGCTTAAGAGCCTTCCCGGAACACCAAGGGAGTTCAGTTACCGAGAGCTTAAGAAAGCCACCAACAACTTCGACGACAAGCACAAACTAGGTCAAGGTGGGTTCGGGGTGGTATACCGAGCTGTGCTAGCTAAGGAGGATAACCTCGAAGTGGCAGTGAAGATGTTCTCAAGGGACGAGGTCAAGGGCAGAGACGACTTTTTGGCCGAGCTCACCATCATTAACCGCCTTCGCCACAAACACCTCGTGCGGTTACTCGGTTGGTGCCACAAGAATGGGATGCTTCTCATTGTCTACGAGTACATGCCAAACGGGAGCTTGGACAACCACCTATTCTCCGGGCCGGAAAATACAACCCTAGGATGGAAACAGAGGTACAAGATTGTCACGGGTGTGGCCTCAGCCCTACACTACCTCCACAACGAGTACGACCAAAGAGTAGTCCACAGAGACCTCAAGGCTAGCAACATAATGCTTGACACCCACTTCAATGCGCGCCTAGGCGATTTCGGCTTGGCGCGCGCCCTGGACAATGAAAAGAACTCGTACGCTGAACTCGAAGGTGTCCCGGGCACGATGGGGTACATCGCCCCAGAGTGCTTCCACACAGGAAAAGCCACATGCGAGTCTGACGTGTACGGGTTCGGGGCGGTGGTTCTAGAAGTTGTGTGCGGTCAACGGCCGTGGAGTAAAATCGGCGGATACCAATTTCTAGTGGATTGGGTATGGTCGTTGCATAGAGAAGGGCGTGTGCTGGAGGCTGTGGACGAGAGGTTGGGTAGTGACTACGTAATTGAGGAGGCCCAAAGGCTTTTGCTTCTTGGGCTGGCTTGTTCCCATCCAATTGCGAACGAAAGGCCCAAGACCCAAACTATAGTTCAAATCATTTCCGGGTCGGTTCCAGTCCCCCCAGTCCCACCTTTCAAACCATCTTTCGTGTGGCCTTCCATGCCGGAAGGAGTGAGCAGCATTGCCAACACGGCCAACACAACGTCGTCCTGGCCTGTCGGGATTTCAGCCTCCGATAGGTCTGAGTGGAGCCCACATTTGGACAGCAGGGATAGCCTGGACCGGTATGGAGGAGCAGGAATATACAGTGACAGCTCTTCCCTGGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase Pkinase_Tyr

Protein Analysis

709

Amino Acids

77.78

Weight (kDa)

6.0

Isoelectric Point (pI)

35.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 28 - 283 1.5e-56 Legume lectin domain
Pkinase PF00069 362 - 570 1.6e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 364 - 574 3.4e-49 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000688)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09820 FvH4_2g17160 FvH4_2g17160
malus_domestica MD02G1107100.v1.1 MD02G1107300.v1.1 MD05G1144900.v1.1 MD10G1144700.v1.1 MD15G1226500.v1.1
prunus_persica Prupe.7G188700_v2.0.a1 Prupe.7G188700_v2.0.a1 Prupe.7G188700_v2.0.a1 Prupe.8G183000_v2.0.a1
pyrus_communis pycom05g14000 pycom10g12440 pycom15g20140
rosa_chinensis RchiOBHm_Chr2g0096621 RchiOBHm_Chr6g0281601 RchiOBHm_Chr6g0281651 RchiOBHm_Chr7g0212121
rosa_laevigata RLG00000002926 RLG00000002927 RLG00000002933 RLG00000008638 RLG00000012954 RLG00000012955 RLG00000016656
rosa_multiflora Rmu_co8091766.1_g000001 Rmu_co8287847.1_g000001 Rmu_co8297221.1_g000001 Rmu_co8485327.1_g000001 Rmu_co8512767.1_g000001 Rmu_sc0002316.1_g000041 Rmu_sc0003565.1_g000009 Rmu_sc0014556.1_g000004 Rmu_sc0027573.1_g000001 Rmu_sc0030028.1_g000001
rosa_roxburghii Rroxscaffold_1G00026540 Rroxscaffold_2G00145470 Rroxscaffold_3G00247100 Rroxscaffold_3G00247110 Rroxscaffold_3G00247120 Rroxscaffold_5G00362680 Rroxscaffold_5G00362710 Rroxscaffold_7G00186950
rosa_rugosa Rorug02G0059000 Rorug02G0059100 Rorug06G0142300 Rorug07G0131000 Rorug07G0131100
rosa_samantha Rh1DG155700 Rh2AG106500 Rh2AG171500 Rh2BG108800 Rh2BG178900 Rh2CG110600 Rh2CG176400 Rh2DG110100 Rh2DG177600 Rh4BG120600 Rh6BG258300 Rh6CG257100 Rh6DG249200 Rh6DG249300 Rh7AG264100 Rh7AG264200 Rh7BG257800 Rh7BG257900 Rh7BG258000 Rh7BG258100 Rh7CG280600 Rh7CG280700 Rh7DG270600
rosa_wichuraiana Rw2G008240 Rw6G022110 Rw7G022540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 550, 914, 1275
AccI GTMKAC 2 cut(s) 1125, 1305
AccII CGCG 6 cut(s) 122, 581, 1013, 1507, 1531, 1533
AccIII TCCGGA 1 cut(s) 496
AclWI GGATC 4 cut(s) 224, 488, 607, 620
AcoI YGGCCR 4 cut(s) 654, 1215, 1691, 1992
AcuI CTGAAG 1 cut(s) 143
AcyI GRCGYC 3 cut(s) 41, 501, 989
AdeI CACNNNGTG 2 cut(s) 457, 1258
AfaI GTAC 7 cut(s) 224, 1313, 1388, 1439, 1559, 1595, 1649
AfiI CCNNNNNNNGG 6 cut(s) 346, 347, 1162, 1374, 2037, 2059
AflII CTTAAG 2 cut(s) 1016, 1061
AflIII ACRYGT 2 cut(s) 114, 1644
AgeI ACCGGT 1 cut(s) 2082
AgsI TTSAA 5 cut(s) 292, 481, 1501, 1892, 1936
AhdI GACNNNNNGTC 1 cut(s) 628
AjiI CACGTC 2 cut(s) 862, 1645
AjnI CCWGG 5 cut(s) 586, 1536, 2009, 2076, 2121
AjuI GAANNNNNNNTTGG 2 cut(s) 1872, 1904
AleI CACNNNNGTG 1 cut(s) 1403
Alw21I GWGCWC 3 cut(s) 471, 969, 1224
Alw26I GTCTC 3 cut(s) 326, 1197, 1455
Alw44I GTGCAC 1 cut(s) 965
AlwI GGATC 4 cut(s) 224, 488, 607, 620
Ama87I CYCGRG 1 cut(s) 1579
Aor13HI TCCGGA 1 cut(s) 496
ApaLI GTGCAC 1 cut(s) 965
ApeKI GCWGC 2 cut(s) 788, 1977
AsiGI ACCGGT 1 cut(s) 2082
Asp700I GAANNNNTTC 1 cut(s) 1175
AspA2I CCTAGG 2 cut(s) 1369, 1510
AspLEI GCGC 9 cut(s) 398, 583, 1013, 1015, 1507, 1509, 1531, 1533, 1535
AspS9I GGNCC 8 cut(s) 89, 124, 931, 994, 1352, 1813, 1869, 2080
AsuHPI GGTGA 5 cut(s) 16, 40, 82, 229, 1216
AsuNHI GCTAGC 2 cut(s) 1138, 1472
AvaI CYCGRG 1 cut(s) 1579
AvaII GGWCC 5 cut(s) 89, 124, 931, 994, 2080
AvrII CCTAGG 2 cut(s) 1369, 1510
BaeGI GKGCMC 2 cut(s) 969, 1586
BalI TGGCCA 1 cut(s) 656
BamHI GGATCC 1 cut(s) 612
BanI GGYRCC 3 cut(s) 550, 914, 1275
BanII GRGCYC 3 cut(s) 471, 1224, 2054
BauI CACGAG 1 cut(s) 1256
Bbv12I GWGCWC 3 cut(s) 471, 969, 1224
BbvCI CCTCAGC 1 cut(s) 1411
BbvI GCAGC 2 cut(s) 800, 1989
BccI CCATC 6 cut(s) 389, 1235, 1368, 1582, 1857, 1948
BceAI ACGGC 4 cut(s) 320, 1678, 1706, 2007
BciT130I CCWGG 5 cut(s) 588, 1538, 2011, 2078, 2123
BciVI GTATCC 2 cut(s) 269, 1706
BcoDI GTCTC 3 cut(s) 326, 1197, 1455
BfaI CTAG 8 cut(s) 905, 1100, 1139, 1370, 1473, 1511, 1670, 1724
BfmI CTRYAG 1 cut(s) 1884
BfoI RGCGCY 1 cut(s) 399
BfrI CTTAAG 2 cut(s) 1016, 1061
BfuI GTATCC 2 cut(s) 269, 1706
BglI GCCNNNNNGGC 1 cut(s) 1991
BisI GCNGC 3 cut(s) 39, 789, 1978
BlnI CCTAGG 2 cut(s) 1369, 1510
BlsI GCNGC 3 cut(s) 40, 790, 1979
Bme18I GGWCC 5 cut(s) 89, 124, 931, 994, 2080
BmeRI GACNNNNNGTC 1 cut(s) 628
BmeT110I CYCGRG 1 cut(s) 1579
BmgBI CACGTC 2 cut(s) 862, 1645
BmgT120I GGNCC 8 cut(s) 89, 124, 931, 994, 1352, 1813, 1869, 2080
BmrI ACTGGG 1 cut(s) 1916
BmsI GCATC 2 cut(s) 360, 1281
BmtI GCTAGC 2 cut(s) 1142, 1476
BmuI ACTGGG 1 cut(s) 1916
BpmI CTGGAG 1 cut(s) 1787
Bpu10I CCTNAGC 3 cut(s) 984, 1143, 1411
BpuEI CTTGAG 3 cut(s) 734, 1165, 1451
BsaAI YACGTR 1 cut(s) 1801
BsaHI GRCGYC 3 cut(s) 41, 501, 989
BsaI GGTCTC 1 cut(s) 1455
BsaWI WCCGGW 2 cut(s) 496, 2082
BsaXI ACNNNNNCTCC 6 cut(s) 681, 711, 1331, 1361, 1410, 1440
Bsc4I CCNNNNNNNGG 6 cut(s) 346, 347, 1162, 1374, 2037, 2059
Bse118I RCCGGY 3 cut(s) 34, 398, 2082
Bse1I ACTGG 3 cut(s) 82, 1913, 1922
Bse3DI GCAATG 1 cut(s) 1980
BseAI TCCGGA 1 cut(s) 496
BseBI CCWGG 5 cut(s) 588, 1538, 2011, 2078, 2123
BseGI GGATG 4 cut(s) 381, 1296, 1379, 1849
BseLI CCNNNNNNNGG 6 cut(s) 346, 347, 1162, 1374, 2037, 2059
BseMI GCAATG 1 cut(s) 1980
BseMII CTCAG 4 cut(s) 71, 222, 1425, 2034
BseNI ACTGG 3 cut(s) 82, 1913, 1922
BsePI GCGCGC 4 cut(s) 1011, 1505, 1529, 1531
BseRI GAGGAG 4 cut(s) 124, 127, 1823, 2106
BseSI GKGCMC 2 cut(s) 969, 1586
BseX3I CGGCCG 1 cut(s) 1691
BseXI GCAGC 2 cut(s) 800, 1989
BseYI CCCAGC 1 cut(s) 385
Bsh1236I CGCG 6 cut(s) 122, 581, 1013, 1507, 1531, 1533
Bsh1285I CGRYCG 1 cut(s) 1694
BshNI GGYRCC 3 cut(s) 550, 914, 1275
BshTI ACCGGT 1 cut(s) 2082
BsiEI CGRYCG 1 cut(s) 1694
BsiHKAI GWGCWC 3 cut(s) 471, 969, 1224
BsiHKCI CYCGRG 1 cut(s) 1579
BsiWI CGTACG 1 cut(s) 1557
BslFI GGGAC 7 cut(s) 75, 323, 890, 1199, 1562, 1901, 1910
BslI CCNNNNNNNGG 6 cut(s) 346, 347, 1162, 1374, 2037, 2059
BsmAI GTCTC 3 cut(s) 326, 1197, 1455
BsmBI CGTCTC 2 cut(s) 326, 1197
BsmFI GGGAC 7 cut(s) 75, 323, 890, 1199, 1562, 1901, 1910
Bso31I GGTCTC 1 cut(s) 1455
BsoBI CYCGRG 1 cut(s) 1579
Bsp1286I GDGCHC 5 cut(s) 471, 969, 1224, 1586, 2054
Bsp13I TCCGGA 1 cut(s) 496
Bsp1407I TGTACA 1 cut(s) 222
Bsp143I GATC 9 cut(s) 97, 141, 162, 216, 253, 493, 576, 612, 667
BspCNI CTCAG 4 cut(s) 70, 221, 1424, 2035
BspEI TCCGGA 1 cut(s) 496
BspFNI CGCG 6 cut(s) 122, 581, 1013, 1507, 1531, 1533
BspOI GCTAGC 2 cut(s) 1142, 1476
BspPI GGATC 4 cut(s) 224, 488, 607, 620
BspQI GCTCTTC 2 cut(s) 162, 2122
BspT107I GGYRCC 3 cut(s) 550, 914, 1275
BspTI CTTAAG 2 cut(s) 1016, 1061
BspTNI GGTCTC 1 cut(s) 1455
BsrDI GCAATG 1 cut(s) 1980
BsrFI RCCGGY 3 cut(s) 34, 398, 2082
BsrGI TGTACA 1 cut(s) 222
BsrI ACTGG 3 cut(s) 82, 1913, 1922
BssAI RCCGGY 3 cut(s) 34, 398, 2082
BssHII GCGCGC 4 cut(s) 1011, 1505, 1529, 1531
BssMI GATC 9 cut(s) 97, 141, 162, 216, 253, 493, 576, 612, 667
BssNAI GTATAC 1 cut(s) 1126
BssNI GRCGYC 3 cut(s) 41, 501, 989
BssSI CACGAG 1 cut(s) 1256
BssT1I CCWWGG 3 cut(s) 1037, 1369, 1510
Bst1107I GTATAC 1 cut(s) 1126
Bst2BI CACGAG 1 cut(s) 1256
Bst2UI CCWGG 5 cut(s) 588, 1538, 2011, 2078, 2123
Bst4CI ACNGT 5 cut(s) 437, 550, 626, 844, 2108
Bst6I CTCTTC 3 cut(s) 162, 268, 2122
BstACI GRCGYC 3 cut(s) 41, 501, 989
BstAFI CTTAAG 2 cut(s) 1016, 1061
BstAUI TGTACA 1 cut(s) 222
BstBAI YACGTR 1 cut(s) 1801
BstC8I GCNNGC 9 cut(s) 36, 812, 1013, 1140, 1474, 1507, 1531, 1533, 1839
BstDEI CTNAG 6 cut(s) 57, 208, 984, 1143, 1411, 2043
BstDSI CCRYGG 1 cut(s) 1694
BstEII GGTNACC 1 cut(s) 437
BstENI CCTNNNNNAGG 1 cut(s) 2035
BstF5I GGATG 4 cut(s) 381, 1296, 1379, 1849
BstFNI CGCG 6 cut(s) 122, 581, 1013, 1507, 1531, 1533
BstH2I RGCGCY 1 cut(s) 399
BstHHI GCGC 9 cut(s) 398, 583, 1013, 1015, 1507, 1509, 1531, 1533, 1535
BstKTI GATC 9 cut(s) 100, 144, 165, 219, 256, 496, 579, 615, 670
BstMAI GTCTC 3 cut(s) 326, 1197, 1455
BstMBI GATC 9 cut(s) 97, 141, 162, 216, 253, 493, 576, 612, 667
BstMCI CGRYCG 1 cut(s) 1694
BstNI CCWGG 5 cut(s) 588, 1538, 2011, 2078, 2123
BstNSI RCATGY 2 cut(s) 1318, 1635
BstPI GGTNACC 1 cut(s) 437
BstSFI CTRYAG 1 cut(s) 1884
BstSLI GKGCMC 2 cut(s) 969, 1586
BstSNI TACGTA 1 cut(s) 1801
BstUI CGCG 6 cut(s) 122, 581, 1013, 1507, 1531, 1533
BstV1I GCAGC 2 cut(s) 800, 1989
BstX2I RGATCY 2 cut(s) 216, 612
BstXI CCANNNNNNTGG 3 cut(s) 454, 511, 1286
BstYI RGATCY 2 cut(s) 216, 612
BstZ17I GTATAC 1 cut(s) 1126
BstZI CGGCCG 1 cut(s) 1691
BsuI GTATCC 2 cut(s) 269, 1706
BtgI CCRYGG 1 cut(s) 1694
BtgZI GCGATG 2 cut(s) 337, 1582
BtrI CACGTC 2 cut(s) 862, 1645
BtsCI GGATG 4 cut(s) 381, 1296, 1379, 1849
BtsI GCAGTG 1 cut(s) 1173
BtsIMutI CAGTG 2 cut(s) 1173, 2113
Cac8I GCNNGC 9 cut(s) 36, 812, 1013, 1140, 1474, 1507, 1531, 1533, 1839
CfoI GCGC 9 cut(s) 398, 583, 1013, 1015, 1507, 1509, 1531, 1533, 1535
Cfr10I RCCGGY 3 cut(s) 34, 398, 2082
Cfr13I GGNCC 8 cut(s) 89, 124, 931, 994, 1352, 1813, 1869, 2080
Cfr9I CCCGGG 1 cut(s) 1579
CseI GACGC 4 cut(s) 30, 62, 509, 978
Csp6I GTAC 7 cut(s) 223, 1312, 1387, 1438, 1558, 1594, 1648
CspAI ACCGGT 1 cut(s) 2082
CspCI CAANNNNNGTGG 2 cut(s) 1676, 1711
CviAII CATG 6 cut(s) 196, 511, 652, 1315, 1632, 1960
CviQI GTAC 7 cut(s) 223, 1312, 1387, 1438, 1558, 1594, 1648
DdeI CTNAG 6 cut(s) 57, 208, 984, 1143, 1411, 2043
DpnI GATC 9 cut(s) 99, 143, 164, 218, 255, 495, 578, 614, 669
DpnII GATC 9 cut(s) 97, 141, 162, 216, 253, 493, 576, 612, 667
DraIII CACNNNGTG 2 cut(s) 457, 1258
DriI GACNNNNNGTC 1 cut(s) 628
EaeI YGGCCR 4 cut(s) 654, 1215, 1691, 1992
EagI CGGCCG 1 cut(s) 1691
Eam1104I CTCTTC 3 cut(s) 162, 268, 2122
Eam1105I GACNNNNNGTC 1 cut(s) 628
EarI CTCTTC 3 cut(s) 162, 268, 2122
EciI GGCGGA 3 cut(s) 166, 322, 1725
Ecl136II GAGCTC 2 cut(s) 469, 1222
EclXI CGGCCG 1 cut(s) 1691
Eco105I TACGTA 1 cut(s) 1801
Eco130I CCWWGG 3 cut(s) 1037, 1369, 1510
Eco24I GRGCYC 3 cut(s) 471, 1224, 2054
Eco31I GGTCTC 1 cut(s) 1455
Eco47I GGWCC 5 cut(s) 89, 124, 931, 994, 2080
Eco52I CGGCCG 1 cut(s) 1691
Eco53kI GAGCTC 2 cut(s) 469, 1222
Eco57I CTGAAG 1 cut(s) 143
Eco88I CYCGRG 1 cut(s) 1579
Eco91I GGTNACC 1 cut(s) 437
EcoICRI GAGCTC 2 cut(s) 469, 1222
EcoNI CCTNNNNNAGG 1 cut(s) 2035
EcoO65I GGTNACC 1 cut(s) 437
EcoRII CCWGG 5 cut(s) 586, 1536, 2009, 2076, 2121
EcoT14I CCWWGG 3 cut(s) 1037, 1369, 1510
EcoT38I GRGCYC 3 cut(s) 471, 1224, 2054
ErhI CCWWGG 3 cut(s) 1037, 1369, 1510
Esp3I CGTCTC 2 cut(s) 326, 1197
FaeI CATG 6 cut(s) 199, 514, 655, 1318, 1635, 1963
FalI AAGNNNNNCTT 4 cut(s) 473, 505, 761, 793
FaqI GGGAC 7 cut(s) 75, 323, 890, 1199, 1562, 1901, 1910
FatI CATG 6 cut(s) 195, 510, 651, 1314, 1631, 1959
FblI GTMKAC 2 cut(s) 1125, 1305
Fnu4HI GCNGC 3 cut(s) 39, 789, 1978
FokI GGATG 4 cut(s) 368, 1303, 1386, 1836
FriOI GRGCYC 3 cut(s) 471, 1224, 2054
Fsp4HI GCNGC 3 cut(s) 39, 789, 1978
FspBI CTAG 8 cut(s) 905, 1100, 1139, 1370, 1473, 1511, 1670, 1724
GlaI GCGC 9 cut(s) 397, 582, 1012, 1014, 1506, 1508, 1530, 1532, 1534
GluI GCNGC 3 cut(s) 39, 789, 1978
GsaI CCCAGC 1 cut(s) 389
GsuI CTGGAG 1 cut(s) 1787
HaeII RGCGCY 1 cut(s) 399
HgaI GACGC 4 cut(s) 30, 62, 509, 978
HhaI GCGC 9 cut(s) 398, 583, 1013, 1015, 1507, 1509, 1531, 1533, 1535
Hin1I GRCGYC 3 cut(s) 41, 501, 989
Hin1II CATG 6 cut(s) 199, 514, 655, 1318, 1635, 1963
Hin6I GCGC 9 cut(s) 396, 581, 1011, 1013, 1505, 1507, 1529, 1531, 1533
HinP1I GCGC 9 cut(s) 396, 581, 1011, 1013, 1505, 1507, 1529, 1531, 1533
HincII GTYRAC 2 cut(s) 763, 1688
HindII GTYRAC 2 cut(s) 763, 1688
HinfI GANTC 8 cut(s) 7, 173, 260, 570, 783, 835, 850, 1637
HphI GGTGA 5 cut(s) 16, 40, 82, 229, 1216
Hpy166II GTNNAC 8 cut(s) 763, 967, 1126, 1306, 1456, 1648, 1688, 1777
Hpy188III TCNNGA 6 cut(s) 244, 257, 497, 574, 1670, 2020
Hpy8I GTNNAC 8 cut(s) 763, 967, 1126, 1306, 1456, 1648, 1688, 1777
Hpy99I CGWCG 7 cut(s) 56, 284, 437, 626, 994, 1088, 2008
HpyCH4III ACNGT 5 cut(s) 437, 550, 626, 844, 2108
HpyCH4IV ACGT 7 cut(s) 116, 279, 312, 861, 1644, 1800, 2003
HpyCH4V TGCA 2 cut(s) 967, 1747
HpyF3I CTNAG 6 cut(s) 57, 208, 984, 1143, 1411, 2043
HpySE526I ACGT 7 cut(s) 116, 279, 312, 861, 1644, 1800, 2003
Hsp92I GRCGYC 3 cut(s) 41, 501, 989
Hsp92II CATG 6 cut(s) 199, 514, 655, 1318, 1635, 1963
HspAI GCGC 9 cut(s) 396, 581, 1011, 1013, 1505, 1507, 1529, 1531, 1533
Kpn2I TCCGGA 1 cut(s) 496
KroI GCCGGC 1 cut(s) 34
KroNI GCCGGC 1 cut(s) 36
Kzo9I GATC 9 cut(s) 97, 141, 162, 216, 253, 493, 576, 612, 667
LguI GCTCTTC 2 cut(s) 162, 2122
LmnI GCTCC 6 cut(s) 137, 335, 689, 1326, 2049, 2093
Lsp1109I GCAGC 2 cut(s) 800, 1989
LweI GCATC 2 cut(s) 360, 1281
MaeI CTAG 8 cut(s) 905, 1100, 1139, 1370, 1473, 1511, 1670, 1724
MaeII ACGT 7 cut(s) 116, 279, 312, 861, 1644, 1800, 2003
MaeIII GTNAC 8 cut(s) 437, 630, 803, 1049, 1263, 1396, 1793, 2108
MalI GATC 9 cut(s) 99, 143, 164, 218, 255, 495, 578, 614, 669
MboI GATC 9 cut(s) 97, 141, 162, 216, 253, 493, 576, 612, 667
MboII GAAGA 6 cut(s) 149, 255, 258, 907, 1183, 2109
MfeI CAATTG 2 cut(s) 462, 1854
MflI RGATCY 2 cut(s) 216, 612
MhlI GDGCHC 5 cut(s) 471, 969, 1224, 1586, 2054
MlsI TGGCCA 1 cut(s) 656
MluCI AATT 5 cut(s) 462, 726, 1718, 1803, 1854
MluNI TGGCCA 1 cut(s) 656
MlyI GAGTC 3 cut(s) 167, 254, 1646
MmeI TCCRAC 1 cut(s) 972
Mox20I TGGCCA 1 cut(s) 656
MroI TCCGGA 1 cut(s) 496
MroNI GCCGGC 1 cut(s) 34
MroXI GAANNNNTTC 1 cut(s) 1175
MscI TGGCCA 1 cut(s) 656
MseI TTAA 9 cut(s) 149, 309, 534, 699, 744, 1017, 1062, 1233, 2128
MslI CAYNNNNRTG 4 cut(s) 194, 1284, 1403, 1500
Msp20I TGGCCA 1 cut(s) 656
MspCI CTTAAG 2 cut(s) 1016, 1061
MunI CAATTG 2 cut(s) 462, 1854
MvaI CCWGG 5 cut(s) 588, 1538, 2011, 2078, 2123
MvnI CGCG 6 cut(s) 122, 581, 1013, 1507, 1531, 1533
NaeI GCCGGC 1 cut(s) 36
NdeII GATC 9 cut(s) 97, 141, 162, 216, 253, 493, 576, 612, 667
NgoMIV GCCGGC 1 cut(s) 34
NheI GCTAGC 2 cut(s) 1138, 1472
NlaIII CATG 6 cut(s) 199, 514, 655, 1318, 1635, 1963
NmeAIII GCCGAG 3 cut(s) 108, 691, 1243
NmuCI GTSAC 4 cut(s) 630, 1396, 1793, 2108
NspI RCATGY 2 cut(s) 1318, 1635
OliI CACNNNNGTG 1 cut(s) 1403
PauI GCGCGC 4 cut(s) 1011, 1505, 1529, 1531
PciSI GCTCTTC 2 cut(s) 162, 2122
PcsI WCGNNNNNNNCGW 3 cut(s) 93, 429, 1566
PdiI GCCGGC 1 cut(s) 36
PdmI GAANNNNTTC 1 cut(s) 1175
PfeI GAWTC 5 cut(s) 7, 570, 783, 835, 850
Pfl23II CGTACG 1 cut(s) 1557
PflFI GACNNNGTC 2 cut(s) 758, 1190
PfoI TCCNGGA 2 cut(s) 271, 1027
PinAI ACCGGT 1 cut(s) 2082
PkrI GCNGC 3 cut(s) 40, 790, 1979
PleI GAGTC 3 cut(s) 167, 254, 1645
PpsI GAGTC 3 cut(s) 167, 254, 1645
Ppu21I YACGTR 1 cut(s) 1801
Psp124BI GAGCTC 2 cut(s) 471, 1224
Psp6I CCWGG 5 cut(s) 586, 1536, 2009, 2076, 2121
PspEI GGTNACC 1 cut(s) 437
PspFI CCCAGC 1 cut(s) 385
PspGI CCWGG 5 cut(s) 586, 1536, 2009, 2076, 2121
PspLI CGTACG 1 cut(s) 1557
PspPI GGNCC 8 cut(s) 89, 124, 931, 994, 1352, 1813, 1869, 2080
PsuI RGATCY 2 cut(s) 216, 612
PsyI GACNNNGTC 2 cut(s) 758, 1190
PteI GCGCGC 4 cut(s) 1011, 1505, 1529, 1531
RsaI GTAC 7 cut(s) 224, 1313, 1388, 1439, 1559, 1595, 1649
RsaNI GTAC 7 cut(s) 223, 1312, 1387, 1438, 1558, 1594, 1648
RseI CAYNNNNRTG 4 cut(s) 194, 1284, 1403, 1500
SacI GAGCTC 2 cut(s) 471, 1224
SapI GCTCTTC 2 cut(s) 162, 2122
SaqAI TTAA 9 cut(s) 149, 309, 534, 699, 744, 1017, 1062, 1233, 2128
SatI GCNGC 3 cut(s) 39, 789, 1978
Sau3AI GATC 9 cut(s) 97, 141, 162, 216, 253, 493, 576, 612, 667
Sau96I GGNCC 8 cut(s) 89, 124, 931, 994, 1352, 1813, 1869, 2080
SchI GAGTC 3 cut(s) 167, 254, 1646
SduI GDGCHC 5 cut(s) 471, 969, 1224, 1586, 2054
SfaNI GCATC 2 cut(s) 360, 1281
SfcI CTRYAG 1 cut(s) 1884
SinI GGWCC 5 cut(s) 89, 124, 931, 994, 2080
SmaI CCCGGG 1 cut(s) 1581
SmiMI CAYNNNNRTG 4 cut(s) 194, 1284, 1403, 1500
SmlI CTYRAG 5 cut(s) 749, 1016, 1061, 1180, 1466
SmoI CTYRAG 5 cut(s) 749, 1016, 1061, 1180, 1466
SnaBI TACGTA 1 cut(s) 1801
Sse9I AATT 5 cut(s) 462, 726, 1718, 1803, 1854
SspMI CTAG 8 cut(s) 905, 1100, 1139, 1370, 1473, 1511, 1670, 1724
SstI GAGCTC 2 cut(s) 471, 1224
StyI CCWWGG 3 cut(s) 1037, 1369, 1510
TaaI ACNGT 5 cut(s) 437, 550, 626, 844, 2108
TaiI ACGT 7 cut(s) 119, 282, 315, 864, 1647, 1803, 2006
TaqI TCGA 9 cut(s) 96, 140, 258, 471, 492, 573, 1083, 1158, 1569
TaqII GACCGA 2 cut(s) 77, 680
TasI AATT 5 cut(s) 462, 726, 1718, 1803, 1854
TatI WGTACW 2 cut(s) 222, 1311
TauI GCSGC 1 cut(s) 41
TfiI GAWTC 5 cut(s) 7, 570, 783, 835, 850
Tru1I TTAA 9 cut(s) 149, 309, 534, 699, 744, 1017, 1062, 1233, 2128
Tru9I TTAA 9 cut(s) 149, 309, 534, 699, 744, 1017, 1062, 1233, 2128
TscAI CASTG 2 cut(s) 1173, 2113
TseFI GTSAC 4 cut(s) 630, 1396, 1793, 2108
TseI GCWGC 2 cut(s) 788, 1977
Tsp45I GTSAC 4 cut(s) 630, 1396, 1793, 2108
TspDTI ATGAA 3 cut(s) 349, 640, 1560
TspGWI ACGGA 2 cut(s) 582, 608
TspMI CCCGGG 1 cut(s) 1579
TspRI CASTG 2 cut(s) 1173, 2113
Tth111I GACNNNGTC 2 cut(s) 758, 1190
Vha464I CTTAAG 2 cut(s) 1016, 1061
VneI GTGCAC 1 cut(s) 965
VpaK11BI GGWCC 5 cut(s) 89, 124, 931, 994, 2080
XagI CCTNNNNNAGG 1 cut(s) 2035
XbaI TCTAGA 1 cut(s) 1669
XceI RCATGY 2 cut(s) 1318, 1635
XcmI CCANNNNNNNNNTGG 4 cut(s) 451, 454, 623, 1947
XmaI CCCGGG 1 cut(s) 1579
XmaJI CCTAGG 2 cut(s) 1369, 1510
XmiI GTMKAC 2 cut(s) 1125, 1305
XmnI GAANNNNTTC 1 cut(s) 1175
XspI CTAG 8 cut(s) 905, 1100, 1139, 1370, 1473, 1511, 1670, 1724
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.