Rh7BG257900

L-type lectin-domain containing receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Reverse (-)
23488285 .. 23488755
471 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG257900.1

Sequence Viewer

Length: 471 bp
ATGAGGATGTCTGGTCAGAAACCAAGAAAGAAGGAAAACTCAAAGATGAAGCTTCTTAAGGATGGAGTGGCAATGCTTGACCCGACAGGGCCCTATAAGAGGATGAGGGCCAGGGCCATGGCCAGGGAAAGGAACCCAATCATGTTAGGCGCATTGAGGGAGTTCAGTTACAGGGATCTGAAGGAAGCTACCAACAACTTTGACTTCAAGCACATAATAAGTCGAGGTGAATGTGTGGTTTACAGAGGATTGCTGTCGAAGGACAATCTTGAAGTGGCAGTGAAGAAGTACTCCAGGGCAGAGAGCGAGGGTAAAGACGATTTGTTGGCTCAGGTCACCAATATTAACCTGCTCCACCACAAACATATTGTCAGATTGCCCGGTGAGTTATTAGTAATCATCACTGCTATCATATTGTCAGATTGCTCGGTGAGTTATTATTCCTTTTTGGTAATGCTCAACGAGTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

156

Amino Acids

17.92

Weight (kDa)

9.66

Isoelectric Point (pI)

24.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000688)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 357
AclWI GGATC 1 cut(s) 183
AcoI YGGCCR 1 cut(s) 120
AcuI CTGAAG 1 cut(s) 200
AfaI GTAC 1 cut(s) 290
AfiI CCNNNNNNNGG 3 cut(s) 99, 123, 129
AflII CTTAAG 1 cut(s) 56
AgsI TTSAA 2 cut(s) 208, 272
AjnI CCWGG 3 cut(s) 110, 122, 293
AluBI AGCT 2 cut(s) 52, 188
AluI AGCT 2 cut(s) 52, 188
AlwI GGATC 1 cut(s) 183
AoxI GGCC 4 cut(s) 89, 108, 114, 120
ApaI GGGCCC 1 cut(s) 93
ArsI GACNNNNNNTTYG 2 cut(s) 354, 386
AspLEI GCGC 1 cut(s) 152
AspS9I GGNCC 4 cut(s) 89, 90, 108, 114
AsuC2I CCSGG 1 cut(s) 381
AsuHPI GGTGA 4 cut(s) 239, 328, 395, 442
BaeGI GKGCMC 1 cut(s) 93
BalI TGGCCA 1 cut(s) 122
BanII GRGCYC 1 cut(s) 93
BccI CCATC 1 cut(s) 56
BciT130I CCWGG 3 cut(s) 112, 124, 295
BcnI CCSGG 1 cut(s) 381
BfrI CTTAAG 1 cut(s) 56
BfuAI ACCTGC 1 cut(s) 357
BmcAI AGTACT 1 cut(s) 290
Bme1390I CCNGG 4 cut(s) 112, 124, 295, 381
BmgT120I GGNCC 4 cut(s) 89, 90, 108, 114
BmiI GGNNCC 2 cut(s) 91, 134
BmrFI CCNGG 4 cut(s) 112, 124, 295, 381
BpmI CTGGAG 1 cut(s) 277
Bpu10I CCTNAGC 1 cut(s) 330
BpuMI CCSGG 1 cut(s) 381
BsaJI CCNNGG 4 cut(s) 111, 117, 123, 294
Bsc4I CCNNNNNNNGG 3 cut(s) 99, 123, 129
Bse3DI GCAATG 1 cut(s) 78
BseBI CCWGG 3 cut(s) 112, 124, 295
BseDI CCNNGG 4 cut(s) 111, 117, 123, 294
BseGI GGATG 3 cut(s) 12, 67, 108
BseLI CCNNNNNNNGG 3 cut(s) 99, 123, 129
BseMI GCAATG 1 cut(s) 78
BseMII CTCAG 1 cut(s) 344
BseSI GKGCMC 1 cut(s) 93
BshFI GGCC 4 cut(s) 91, 110, 116, 122
BsiSI CCGG 1 cut(s) 381
BslI CCNNNNNNNGG 3 cut(s) 99, 123, 129
BsnI GGCC 4 cut(s) 91, 110, 116, 122
Bsp120I GGGCCC 1 cut(s) 89
Bsp1286I GDGCHC 1 cut(s) 93
Bsp143I GATC 1 cut(s) 175
Bsp19I CCATGG 1 cut(s) 117
BspANI GGCC 4 cut(s) 91, 110, 116, 122
BspCNI CTCAG 1 cut(s) 343
BspLI GGNNCC 2 cut(s) 91, 134
BspMI ACCTGC 1 cut(s) 357
BspPI GGATC 1 cut(s) 183
BspTI CTTAAG 1 cut(s) 56
BsrDI GCAATG 1 cut(s) 78
BssECI CCNNGG 4 cut(s) 111, 117, 123, 294
BssMI GATC 1 cut(s) 175
BssT1I CCWWGG 1 cut(s) 117
Bst2UI CCWGG 3 cut(s) 112, 124, 295
BstAFI CTTAAG 1 cut(s) 56
BstDEI CTNAG 1 cut(s) 330
BstDSI CCRYGG 1 cut(s) 117
BstEII GGTNACC 1 cut(s) 334
BstENI CCTNNNNNAGG 1 cut(s) 97
BstF5I GGATG 3 cut(s) 12, 67, 108
BstHHI GCGC 1 cut(s) 152
BstKTI GATC 1 cut(s) 178
BstMBI GATC 1 cut(s) 175
BstNI CCWGG 3 cut(s) 112, 124, 295
BstPI GGTNACC 1 cut(s) 334
BstSCI CCNGG 4 cut(s) 110, 122, 293, 379
BstSLI GKGCMC 1 cut(s) 93
BstX2I RGATCY 1 cut(s) 175
BstXI CCANNNNNNTGG 1 cut(s) 118
BstYI RGATCY 1 cut(s) 175
BsuRI GGCC 4 cut(s) 91, 110, 116, 122
BtgI CCRYGG 1 cut(s) 117
BtsCI GGATG 3 cut(s) 12, 67, 108
BtsI GCAGTG 2 cut(s) 285, 402
BtsIMutI CAGTG 2 cut(s) 285, 402
BveI ACCTGC 1 cut(s) 357
CfoI GCGC 1 cut(s) 152
Cfr13I GGNCC 4 cut(s) 89, 90, 108, 114
Csp6I GTAC 1 cut(s) 289
CviAII CATG 2 cut(s) 118, 142
CviJI RGCY 7 cut(s) 52, 91, 110, 116, 122, 188, 329
CviKI_1 RGCY 7 cut(s) 52, 91, 110, 116, 122, 188, 329
CviQI GTAC 1 cut(s) 289
DdeI CTNAG 1 cut(s) 330
DpnI GATC 1 cut(s) 177
DpnII GATC 1 cut(s) 175
EaeI YGGCCR 1 cut(s) 120
Eco130I CCWWGG 1 cut(s) 117
Eco24I GRGCYC 1 cut(s) 93
Eco57I CTGAAG 1 cut(s) 200
Eco91I GGTNACC 1 cut(s) 334
EcoNI CCTNNNNNAGG 1 cut(s) 97
EcoO109I RGGNCCY 2 cut(s) 89, 90
EcoO65I GGTNACC 1 cut(s) 334
EcoRII CCWGG 3 cut(s) 110, 122, 293
EcoT14I CCWWGG 1 cut(s) 117
EcoT38I GRGCYC 1 cut(s) 93
ErhI CCWWGG 1 cut(s) 117
FaeI CATG 2 cut(s) 121, 145
FaiI YATR 6 cut(s) 96, 119, 143, 215, 366, 413
FatI CATG 2 cut(s) 117, 141
FokI GGATG 3 cut(s) 19, 74, 115
FriOI GRGCYC 1 cut(s) 93
GlaI GCGC 1 cut(s) 151
GsuI CTGGAG 1 cut(s) 277
HaeIII GGCC 4 cut(s) 91, 110, 116, 122
HapII CCGG 1 cut(s) 381
HhaI GCGC 1 cut(s) 152
Hin1II CATG 2 cut(s) 121, 145
Hin6I GCGC 1 cut(s) 150
HinP1I GCGC 1 cut(s) 150
HindIII AAGCTT 1 cut(s) 50
HpaII CCGG 1 cut(s) 381
HphI GGTGA 4 cut(s) 239, 328, 395, 442
Hpy166II GTNNAC 1 cut(s) 241
Hpy188I TCNGA 4 cut(s) 18, 180, 374, 421
Hpy188III TCNNGA 1 cut(s) 269
Hpy8I GTNNAC 1 cut(s) 241
HpyAV CCTTC 3 cut(s) 25, 175, 253
HpyF3I CTNAG 1 cut(s) 330
Hsp92II CATG 2 cut(s) 121, 145
HspAI GCGC 1 cut(s) 150
Kzo9I GATC 1 cut(s) 175
LmnI GCTCC 1 cut(s) 357
MaeIII GTNAC 2 cut(s) 167, 334
MalI GATC 1 cut(s) 177
MboI GATC 1 cut(s) 175
MboII GAAGA 1 cut(s) 295
MflI RGATCY 1 cut(s) 175
MhlI GDGCHC 1 cut(s) 93
MlsI TGGCCA 1 cut(s) 122
MluNI TGGCCA 1 cut(s) 122
MnlI CCTC 6 cut(s) 93, 99, 150, 218, 239, 301
Mox20I TGGCCA 1 cut(s) 122
MscI TGGCCA 1 cut(s) 122
MseI TTAA 3 cut(s) 57, 345, 469
Msp20I TGGCCA 1 cut(s) 122
MspCI CTTAAG 1 cut(s) 56
MspI CCGG 1 cut(s) 381
MspR9I CCNGG 4 cut(s) 112, 124, 295, 381
MvaI CCWGG 3 cut(s) 112, 124, 295
NciI CCSGG 1 cut(s) 381
NcoI CCATGG 1 cut(s) 117
NdeII GATC 1 cut(s) 175
NlaIII CATG 2 cut(s) 121, 145
NlaIV GGNNCC 2 cut(s) 91, 134
NmuCI GTSAC 1 cut(s) 334
Psp6I CCWGG 3 cut(s) 110, 122, 293
PspEI GGTNACC 1 cut(s) 334
PspGI CCWGG 3 cut(s) 110, 122, 293
PspN4I GGNNCC 2 cut(s) 91, 134
PspOMI GGGCCC 1 cut(s) 89
PspPI GGNCC 4 cut(s) 89, 90, 108, 114
PsuI RGATCY 1 cut(s) 175
RsaI GTAC 1 cut(s) 290
RsaNI GTAC 1 cut(s) 289
SaqAI TTAA 3 cut(s) 57, 345, 469
Sau3AI GATC 1 cut(s) 175
Sau96I GGNCC 4 cut(s) 89, 90, 108, 114
ScaI AGTACT 1 cut(s) 290
ScrFI CCNGG 4 cut(s) 112, 124, 295, 381
SduI GDGCHC 1 cut(s) 93
SetI ASST 5 cut(s) 54, 190, 229, 336, 351
SmlI CTYRAG 1 cut(s) 56
SmoI CTYRAG 1 cut(s) 56
SspI AATATT 1 cut(s) 343
StyD4I CCNGG 4 cut(s) 110, 122, 293, 379
StyI CCWWGG 1 cut(s) 117
TaqI TCGA 2 cut(s) 223, 257
TatI WGTACW 1 cut(s) 288
Tru1I TTAA 3 cut(s) 57, 345, 469
Tru9I TTAA 3 cut(s) 57, 345, 469
TscAI CASTG 2 cut(s) 285, 409
TseFI GTSAC 1 cut(s) 334
Tsp45I GTSAC 1 cut(s) 334
TspDTI ATGAA 1 cut(s) 62
TspRI CASTG 2 cut(s) 285, 409
Vha464I CTTAAG 1 cut(s) 56
XagI CCTNNNNNAGG 1 cut(s) 97
ZrmI AGTACT 1 cut(s) 290
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.