Rorug07G0131100
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
10369657 .. 10373925
4269 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0131100.1

Sequence Viewer

Length: 1203 bp
ATGAAGGAGGGCAGTGATGGGTTTGTTAGGGCCGATCAGATTGATCTCAAGAGCTTGGATGAGCAGCTGGAGAGACATCTCAACAGGGTTTTGACTTTGGAGAAGACCAAGATGAGAGGAGACCAAGACACCAATTCCACCACCACCACCACCAACAACAACAACAACCTCAACAGTCTCAACCTCAGCACCACCTCCGCCGCCTCCGCCGCCGCCACCTCCACTTCCGGCATGACTCTCTCCATCCCCAAGCGCCACAGGCAGGAGTGGGAGATCGACCCTTCCAAGCTCATCATCAAGACCGTCATTGCACGTGGCACGTTCGGCACCGTCCACCGTGGCATCTACGACGGCCAAGATGTCGCCGTGAAATTACTCGACTGGGGTGAAGAGGGTCACAGGACGGACGCTGAAATTGCTTCTCTAAGGGCAGCTTTTACCCAAGAAGTTGCTGTCTGGCATAAACTAGACCATCCTAATGTTACTAAGTTTATAGGGGCGACAATGGGTTCTTCAGAACTACAAATTCAGACTGAAAATGGTCAAATTGGCATGCCAAGTAATATCTGTTGTGTCGTCGTGGAATATCTTCCTGGGGGTGCTCTAAAATCATACCTTATAAAGAATAGGAGAAGGAAGTTGGCTTTTAAGGTCGTGGTCCAGTTGGCACTAGATCTTGCTAGAGGGTTAAGTTACCTGCACTCACAAAAGATTGTTCACCGAGATGTAAAGACAGAGAACATGCTGCTTGACAAGACACGTACTGTCAAGATTGCTGATTTTGGTGTTGCTCGTGTCGAAGCTTCAAATCCTAATGACATGACTGGGGAGACTGGCACACTTGGTTACATGGCTCCTGAGGTTCTCAATGGAAACCCATATAATCGGAAATGTGATGTGTACAGTTTTGGCATCTGTCTATGGGAGATATACTGCTGTGACATGCCATATCCTGACCTTAGCTTCTCGGAAGTGACTTCAGCTGTGGTTCGCCAGAATTTGAGACCAGACATACCAAGATGTTGTCCAAGTGCTCTAGCAAATGTAATGAAGCGATGTTGGGATGCTAACCCAGACAAACGGCCAGAGATGGATGAGGTAGTCTCAATGATCGAGGCCATTGACACAACTAAAGGTGGAGGTATGATCCCTCAAGATCAGTCTCAGGGTTGTCTCTGCTTCCGCAAGTATAGAGGACCGTAA

Protein Analysis

400

Amino Acids

44.42

Weight (kDa)

7.06

Isoelectric Point (pI)

32.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 99 - 370 1.5e-61 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 101 - 369 4.6e-49 Protein kinase domain
Kinase-like PF14531 208 - 317 2.1e-06 Kinase-like
Pkinase_fungal PF17667 228 - 303 6.4e-06 Fungal protein kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000688)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 620
Acc36I ACCTGC 1 cut(s) 705
AccB1I GGYRCC 1 cut(s) 326
AciI CCGC 6 cut(s) 198, 201, 207, 210, 213, 1183
AclWI GGATC 1 cut(s) 1141
AcoI YGGCCR 2 cut(s) 352, 1082
AcsI RAATTY 2 cut(s) 525, 997
AcuI CTGAAG 2 cut(s) 498, 963
AcvI CACGTG 1 cut(s) 314
AfaI GTAC 2 cut(s) 763, 902
AfiI CCNNNNNNNGG 1 cut(s) 262
AflIII ACRYGT 1 cut(s) 758
AgsI TTSAA 1 cut(s) 807
AjnI CCWGG 1 cut(s) 592
AluBI AGCT 7 cut(s) 54, 67, 289, 434, 803, 963, 983
AluI AGCT 7 cut(s) 54, 67, 289, 434, 803, 963, 983
Alw21I GWGCWC 2 cut(s) 604, 1036
Alw26I GTCTC 8 cut(s) 67, 114, 182, 824, 997, 1108, 1167, 1178
AlwI GGATC 1 cut(s) 1141
AoxI GGCC 4 cut(s) 30, 352, 1082, 1116
ApeKI GCWGC 3 cut(s) 64, 431, 745
ApoI RAATTY 2 cut(s) 525, 997
Asp700I GAANNNNTTC 1 cut(s) 588
AspLEI GCGC 1 cut(s) 255
AspS9I GGNCC 3 cut(s) 30, 658, 1196
AsuHPI GGTGA 2 cut(s) 398, 710
AvaII GGWCC 2 cut(s) 658, 1196
AxyI CCTNAGG 1 cut(s) 858
BanI GGYRCC 1 cut(s) 326
BauI CACGAG 1 cut(s) 792
BbrPI CACGTG 1 cut(s) 314
BbsI GAAGAC 1 cut(s) 110
Bbv12I GWGCWC 2 cut(s) 604, 1036
BbvCI CCTCAGC 1 cut(s) 185
BbvI GCAGC 3 cut(s) 76, 443, 732
BccI CCATC 4 cut(s) 11, 251, 480, 1084
BceAI ACGGC 3 cut(s) 350, 367, 1097
BciT130I CCWGG 1 cut(s) 594
BcoDI GTCTC 8 cut(s) 67, 114, 182, 824, 997, 1108, 1167, 1178
BfaI CTAG 4 cut(s) 467, 671, 681, 1037
BfoI RGCGCY 1 cut(s) 256
BfuAI ACCTGC 1 cut(s) 705
BglII AGATCT 1 cut(s) 673
BisI GCNGC 6 cut(s) 65, 201, 210, 213, 432, 746
BlsI GCNGC 6 cut(s) 66, 202, 211, 214, 433, 747
Bme1390I CCNGG 1 cut(s) 594
Bme18I GGWCC 2 cut(s) 658, 1196
BmgT120I GGNCC 3 cut(s) 30, 658, 1196
BmiI GGNNCC 2 cut(s) 328, 855
BmrFI CCNGG 1 cut(s) 594
BmrI ACTGGG 2 cut(s) 391, 834
BmsI GCATC 3 cut(s) 351, 921, 1054
BmuI ACTGGG 2 cut(s) 391, 834
BpiI GAAGAC 1 cut(s) 110
BplI GAGNNNNNCTC 2 cut(s) 1088, 1120
BpmI CTGGAG 1 cut(s) 89
Bpu10I CCTNAGC 2 cut(s) 185, 959
BpuEI CTTGAG 2 cut(s) 32, 1137
BsaAI YACGTR 2 cut(s) 314, 761
BsaI GGTCTC 2 cut(s) 114, 997
BsaJI CCNNGG 2 cut(s) 337, 593
Bsc4I CCNNNNNNNGG 1 cut(s) 262
Bse1I ACTGG 4 cut(s) 386, 661, 829, 838
Bse21I CCTNAGG 1 cut(s) 858
Bse3DI GCAATG 1 cut(s) 306
BseBI CCWGG 1 cut(s) 594
BseDI CCNNGG 2 cut(s) 337, 593
BseGI GGATG 5 cut(s) 64, 243, 472, 1069, 1099
BseLI CCNNNNNNNGG 1 cut(s) 262
BseMI GCAATG 1 cut(s) 306
BseMII CTCAG 3 cut(s) 199, 849, 1178
BseNI ACTGG 4 cut(s) 386, 661, 829, 838
BseRI GAGGAG 1 cut(s) 132
BseXI GCAGC 3 cut(s) 76, 443, 732
BsgI GTGCAG 1 cut(s) 683
BshFI GGCC 4 cut(s) 32, 354, 1084, 1118
BshNI GGYRCC 1 cut(s) 326
BsiHKAI GWGCWC 2 cut(s) 604, 1036
BsiSI CCGG 1 cut(s) 228
BslI CCNNNNNNNGG 1 cut(s) 262
BsmAI GTCTC 8 cut(s) 67, 114, 182, 824, 997, 1108, 1167, 1178
BsnI GGCC 4 cut(s) 32, 354, 1084, 1118
Bso31I GGTCTC 2 cut(s) 114, 997
Bsp1286I GDGCHC 2 cut(s) 604, 1036
Bsp1407I TGTACA 1 cut(s) 900
Bsp143I GATC 7 cut(s) 34, 43, 273, 673, 1110, 1146, 1156
BspACI CCGC 6 cut(s) 198, 201, 207, 210, 213, 1183
BspANI GGCC 4 cut(s) 32, 354, 1084, 1118
BspCNI CTCAG 3 cut(s) 198, 850, 1177
BspLI GGNNCC 2 cut(s) 328, 855
BspMI ACCTGC 1 cut(s) 705
BspPI GGATC 1 cut(s) 1141
BspT107I GGYRCC 1 cut(s) 326
BspTNI GGTCTC 2 cut(s) 114, 997
BsrDI GCAATG 1 cut(s) 306
BsrGI TGTACA 1 cut(s) 900
BsrI ACTGG 4 cut(s) 386, 661, 829, 838
BssECI CCNNGG 2 cut(s) 337, 593
BssMI GATC 7 cut(s) 34, 43, 273, 673, 1110, 1146, 1156
BssSI CACGAG 1 cut(s) 792
Bst2BI CACGAG 1 cut(s) 792
Bst2UI CCWGG 1 cut(s) 594
Bst4CI ACNGT 7 cut(s) 176, 304, 331, 338, 766, 905, 1200
Bst6I CTCTTC 1 cut(s) 384
BstAUI TGTACA 1 cut(s) 900
BstBAI YACGTR 2 cut(s) 314, 761
BstC8I GCNNGC 1 cut(s) 554
BstDEI CTNAG 6 cut(s) 185, 425, 486, 858, 959, 1164
BstDSI CCRYGG 1 cut(s) 337
BstF5I GGATG 5 cut(s) 64, 243, 472, 1069, 1099
BstH2I RGCGCY 1 cut(s) 256
BstHHI GCGC 1 cut(s) 255
BstKTI GATC 7 cut(s) 37, 46, 276, 676, 1113, 1149, 1159
BstMAI GTCTC 8 cut(s) 67, 114, 182, 824, 997, 1108, 1167, 1178
BstMBI GATC 7 cut(s) 34, 43, 273, 673, 1110, 1146, 1156
BstMWI GCNNNNNNNGC 5 cut(s) 206, 209, 259, 324, 416
BstNI CCWGG 1 cut(s) 594
BstNSI RCATGY 3 cut(s) 556, 745, 946
BstSCI CCNGG 1 cut(s) 592
BstV1I GCAGC 3 cut(s) 76, 443, 732
BstV2I GAAGAC 1 cut(s) 110
BstX2I RGATCY 1 cut(s) 673
BstYI RGATCY 1 cut(s) 673
Bsu36I CCTNAGG 1 cut(s) 858
BsuRI GGCC 4 cut(s) 32, 354, 1084, 1118
BtgI CCRYGG 1 cut(s) 337
BtgZI GCGATG 1 cut(s) 1069
BtsCI GGATG 5 cut(s) 64, 243, 472, 1069, 1099
BtsI GCAGTG 1 cut(s) 19
BtsIMutI CAGTG 1 cut(s) 19
BveI ACCTGC 1 cut(s) 705
Cac8I GCNNGC 1 cut(s) 554
CfoI GCGC 1 cut(s) 255
Cfr13I GGNCC 3 cut(s) 30, 658, 1196
CseI GACGC 1 cut(s) 416
Csp6I GTAC 2 cut(s) 762, 901
CviAII CATG 6 cut(s) 232, 553, 742, 820, 850, 943
CviQI GTAC 2 cut(s) 762, 901
DdeI CTNAG 6 cut(s) 185, 425, 486, 858, 959, 1164
DpnI GATC 7 cut(s) 36, 45, 275, 675, 1112, 1148, 1158
DpnII GATC 7 cut(s) 34, 43, 273, 673, 1110, 1146, 1156
EaeI YGGCCR 2 cut(s) 352, 1082
Eam1104I CTCTTC 1 cut(s) 384
EarI CTCTTC 1 cut(s) 384
EciI GGCGGA 2 cut(s) 187, 196
Eco31I GGTCTC 2 cut(s) 114, 997
Eco47I GGWCC 2 cut(s) 658, 1196
Eco57I CTGAAG 2 cut(s) 498, 963
Eco72I CACGTG 1 cut(s) 314
Eco81I CCTNAGG 1 cut(s) 858
EcoRII CCWGG 1 cut(s) 592
FaeI CATG 6 cut(s) 235, 556, 745, 823, 853, 946
FalI AAGNNNNNCTT 2 cut(s) 418, 450
FatI CATG 6 cut(s) 231, 552, 741, 819, 849, 942
Fnu4HI GCNGC 6 cut(s) 65, 201, 210, 213, 432, 746
FokI GGATG 5 cut(s) 71, 230, 459, 1076, 1106
Fsp4HI GCNGC 6 cut(s) 65, 201, 210, 213, 432, 746
FspBI CTAG 4 cut(s) 467, 671, 681, 1037
GlaI GCGC 1 cut(s) 254
GluI GCNGC 6 cut(s) 65, 201, 210, 213, 432, 746
GsuI CTGGAG 1 cut(s) 89
HaeII RGCGCY 1 cut(s) 256
HaeIII GGCC 4 cut(s) 32, 354, 1084, 1118
HapII CCGG 1 cut(s) 228
HgaI GACGC 1 cut(s) 416
HhaI GCGC 1 cut(s) 255
Hin1II CATG 6 cut(s) 235, 556, 745, 823, 853, 946
Hin6I GCGC 1 cut(s) 253
HinP1I GCGC 1 cut(s) 253
HindIII AAGCTT 1 cut(s) 801
HinfI GANTC 1 cut(s) 235
HpaII CCGG 1 cut(s) 228
HphI GGTGA 2 cut(s) 398, 710
Hpy166II GTNNAC 3 cut(s) 334, 718, 901
Hpy188I TCNGA 5 cut(s) 39, 517, 531, 888, 970
Hpy188III TCNNGA 6 cut(s) 49, 298, 769, 857, 953, 1154
Hpy8I GTNNAC 3 cut(s) 334, 718, 901
Hpy99I CGWCG 2 cut(s) 353, 581
HpyAV CCTTC 2 cut(s) 291, 627
HpyCH4III ACNGT 7 cut(s) 176, 304, 331, 338, 766, 905, 1200
HpyCH4IV ACGT 3 cut(s) 313, 320, 760
HpyCH4V TGCA 2 cut(s) 311, 700
HpyF10VI GCNNNNNNNGC 5 cut(s) 206, 209, 259, 324, 416
HpyF3I CTNAG 6 cut(s) 185, 425, 486, 858, 959, 1164
HpySE526I ACGT 3 cut(s) 313, 320, 760
Hsp92II CATG 6 cut(s) 235, 556, 745, 823, 853, 946
HspAI GCGC 1 cut(s) 253
Kzo9I GATC 7 cut(s) 34, 43, 273, 673, 1110, 1146, 1156
LmnI GCTCC 1 cut(s) 859
Lsp1109I GCAGC 3 cut(s) 76, 443, 732
LweI GCATC 3 cut(s) 351, 921, 1054
MaeI CTAG 4 cut(s) 467, 671, 681, 1037
MaeII ACGT 3 cut(s) 313, 320, 760
MaeIII GTNAC 6 cut(s) 395, 481, 692, 845, 938, 973
MalI GATC 7 cut(s) 36, 45, 275, 675, 1112, 1148, 1158
MboI GATC 7 cut(s) 34, 43, 273, 673, 1110, 1146, 1156
MboII GAAGA 4 cut(s) 115, 401, 504, 581
MflI RGATCY 1 cut(s) 673
MhlI GDGCHC 2 cut(s) 604, 1036
MluCI AATT 6 cut(s) 133, 371, 414, 525, 546, 997
MlyI GAGTC 1 cut(s) 229
MroXI GAANNNNTTC 1 cut(s) 588
MseI TTAA 2 cut(s) 648, 689
MslI CAYNNNNRTG 2 cut(s) 477, 723
MspA1I CMGCKG 2 cut(s) 67, 983
MspI CCGG 1 cut(s) 228
MspR9I CCNGG 1 cut(s) 594
MvaI CCWGG 1 cut(s) 594
MwoI GCNNNNNNNGC 5 cut(s) 206, 209, 259, 324, 416
NdeII GATC 7 cut(s) 34, 43, 273, 673, 1110, 1146, 1156
NlaIII CATG 6 cut(s) 235, 556, 745, 823, 853, 946
NlaIV GGNNCC 2 cut(s) 328, 855
NmuCI GTSAC 3 cut(s) 395, 938, 973
NspI RCATGY 3 cut(s) 556, 745, 946
PaeI GCATGC 1 cut(s) 556
PdmI GAANNNNTTC 1 cut(s) 588
PkrI GCNGC 6 cut(s) 66, 202, 211, 214, 433, 747
PleI GAGTC 1 cut(s) 229
PmaCI CACGTG 1 cut(s) 314
PmlI CACGTG 1 cut(s) 314
PpsI GAGTC 1 cut(s) 229
Ppu21I YACGTR 2 cut(s) 314, 761
PsiI TTATAA 1 cut(s) 620
Psp6I CCWGG 1 cut(s) 592
PspCI CACGTG 1 cut(s) 314
PspGI CCWGG 1 cut(s) 592
PspN4I GGNNCC 2 cut(s) 328, 855
PspPI GGNCC 3 cut(s) 30, 658, 1196
PsuI RGATCY 1 cut(s) 673
PvuII CAGCTG 2 cut(s) 67, 983
RsaI GTAC 2 cut(s) 763, 902
RsaNI GTAC 2 cut(s) 762, 901
RseI CAYNNNNRTG 2 cut(s) 477, 723
SaqAI TTAA 2 cut(s) 648, 689
SatI GCNGC 6 cut(s) 65, 201, 210, 213, 432, 746
Sau3AI GATC 7 cut(s) 34, 43, 273, 673, 1110, 1146, 1156
Sau96I GGNCC 3 cut(s) 30, 658, 1196
SchI GAGTC 1 cut(s) 229
ScrFI CCNGG 1 cut(s) 594
SduI GDGCHC 2 cut(s) 604, 1036
SfaNI GCATC 3 cut(s) 351, 921, 1054
SinI GGWCC 2 cut(s) 658, 1196
SmiMI CAYNNNNRTG 2 cut(s) 477, 723
SmlI CTYRAG 2 cut(s) 47, 1152
SmoI CTYRAG 2 cut(s) 47, 1152
SphI GCATGC 1 cut(s) 556
Sse9I AATT 6 cut(s) 133, 371, 414, 525, 546, 997
SsiI CCGC 6 cut(s) 198, 201, 207, 210, 213, 1183
SspMI CTAG 4 cut(s) 467, 671, 681, 1037
StyD4I CCNGG 1 cut(s) 592
TaaI ACNGT 7 cut(s) 176, 304, 331, 338, 766, 905, 1200
TaiI ACGT 3 cut(s) 316, 323, 763
TaqI TCGA 4 cut(s) 276, 378, 798, 1113
TasI AATT 6 cut(s) 133, 371, 414, 525, 546, 997
TatI WGTACW 1 cut(s) 900
TauI GCSGC 3 cut(s) 203, 212, 215
Tru1I TTAA 2 cut(s) 648, 689
Tru9I TTAA 2 cut(s) 648, 689
TscAI CASTG 1 cut(s) 19
TseFI GTSAC 3 cut(s) 395, 938, 973
TseI GCWGC 3 cut(s) 64, 431, 745
Tsp45I GTSAC 3 cut(s) 395, 938, 973
TspDTI ATGAA 2 cut(s) 17, 1064
TspGWI ACGGA 1 cut(s) 419
TspRI CASTG 1 cut(s) 19
VpaK11BI GGWCC 2 cut(s) 658, 1196
XapI RAATTY 2 cut(s) 525, 997
XceI RCATGY 3 cut(s) 556, 745, 946
XmnI GAANNNNTTC 1 cut(s) 588
XspI CTAG 4 cut(s) 467, 671, 681, 1037
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.