MD15G1226500.v1.1

L-type lectin-domain containing receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0000688
Physical Location & Seq
Reverse (-)
18396144 .. 18400086
3943 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1226500.v1.1.491

Sequence Viewer

Length: 2190 bp
ATGAGTGAGATTGCAACGACGTCGTCGTCTTCTTCTTCCAGCTGCTACATGAAGCTGAAGCAGCTGACAGCCGGTGCGACGGCTCTCCTGCTGCTTCTGCTGCTGCCGGCAGCTTTCTCCGATGCTGACACCCTCAGTACGTCTCAAAACGAGTTCGGCCCCTTCGACCAATCGTATTACAACAAGTTCGCTGTGCTCCTGCCGGCGACGATCAGCAACGAGGCGCTCCAGATCACGCCGGACTCCGCCGGAAACTTCACCCTCTTCAACCGCTCAGGTAGAGTCTTCTACAACCAATCTTTCACGCTCTGGAAAGATTTGGATTCAGATTCTCCCGATTCTGCAGCAAACGGAAGCCACGTGGCGTCTTTCAATTCGTCGTTCCTGATTAACGTCTTTCGTCTCAACGGCTCCGCCGTCCCAGGCGAGGGCCTGGCGTTCCTCATCGCGCCGGATATGACCCTCCCGGCGGCCAGCGACGGTCAATACCTCGGTTTGACCAACGCCACCACCGATGGAGACCCCAACAACCACTTCCTCGCCATCGAGCTCGACACATTTAAACAAGATTTCGACCCGGACGACAACCACATGGGCATCAACATCAATTCAATCCGGTCCAACAAGACCGTTTCGCTGTCGGATGTGAATATCCAGATCGCACCTTCCGGTACCCGATTTTACATGGTCTGGATCGAATACGGCGGCGAGTCGCACCAGTTAGACGTTTATATGGCCGAGCAAGACGGGGAACCGCAGACCGGGTTCGTTATCCGGCCCAGGCCCACAAGCCCAGTCCTAACCGCCAATCTCAACCTCAAGGACATAGTGAAACAGAAATCCTATTTCGGTTTCGCCGCGTCGACCGGGAGCGCGATCGAGCTCAATTGTGTGTTGAGATGGAATCTGACGGTGGAGCTTCTGCCAGGTGGCAAGGGTGGGAATAGTAATGAGGGGTTGAAGATTGGGCTCGCGGTGGGTGTGCCCGCGGTGGCTCTGTTGCTGTTGGGCCTGGGCGGGTTGGGGTATTATTTGTACAAGCGGCGGAAGGCGGCGGCGTCGGACGAGAATATTTTTGGGGCGCTCAAGAGTCTTCCGGGCACTCCGAGGGAGTTTAGTTTCAAGGAATTGAAGAAGGCGACGAACAATTTCGACGATAAGCACAAATTGGGGCAAGGCGGATTTGGGGTGGTATATAGAGGTGTGCTGCCAAAAGAGAACTTGGAGGTGGCGGTGAAGAAATTTTCCCGGGATAATCTCAAGGGCAAGGACGACTTTTTGGCTGAGCTCACCATTATCAACCGGCTCCGGCACAAGCATCTCGTCCGATTACTCGGATGGTGCCACAAAAATGGAATGCTACTCATAGTCTACGAGTTCATGCCCAACGGCAGCTTGGACAACCACCTGTTTGGCGAGACGGAAAACGCAACCCTAGGTTGGAGCGAGAGGTACAAAATCGTTGCCGGAGTAGCTTCCGCCCTACATTACCTCCACAATGAGTACGACCAACGAGTTGTCCATAGAGACCTAAAAGCTAGCAACATAATGCTAGACTCCAACTTCAACTCCCGCCTCGGGGACTTTGGCCTCGCTCGTGCCTTGGACAACGAGAAGACCTCGTACGCTGAGCTCGAGGGTGTTCCGGGCACAATGGGGTACATAGCCCCCGAGTGTTTCCACACGGGGAAAGCCACGTGCGAGTCCGATATTTACGGATTCGGGGCTGTGCTCATAGAAGTCGTGTGTGGTCAACGGCCGTGGACCAAAATGGGAGGGTTCCAATTCATTGTGGATTGGGTTTGGTCGTTGCACAGAGAAGGGCGCGTGTTGGATGCCGTCGATGAGAGGCTGGGAAATGATTACGTGGCGGAGGAAGCCGAGAGGCTTTTGCTTCTTGGGCTGGCCTGCATGCACCCGATCGCAGGCGAGAGGCCCAAGACCCAAACCATTATCCAAATCATTTCCGGGTCGGTTCCCGTGCCCCGGGTCCCATCCTTTAAACCCGCTTTCGTGTGGCCCTCCAGCAATATGCCTGAGGGAGTGAGTAGCGTAGCAAACACGATGAGTACGACGTCGTCCTGGCCCCTTGAGATATCGGTGGCAGATACTTCTGACTGGACCCCGCGCTACGACAGCAAGGATAGCAATGGAGGAACAAGACAACATAGTGACAGCTTCTTGATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase Pkinase_Tyr

Protein Analysis

730

Amino Acids

79.81

Weight (kDa)

5.53

Isoelectric Point (pI)

43.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 61 - 306 1.4e-57 Legume lectin domain
Lectin_L-type_dom PF18483 124 - 296 2e-06 Legume lectin beta-barrel domain
Pkinase PF00069 385 - 590 5.8e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 387 - 596 4.1e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000688)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09820 FvH4_2g17160 FvH4_2g17160
malus_domestica MD02G1107100.v1.1 MD02G1107300.v1.1 MD05G1144900.v1.1 MD10G1144700.v1.1 MD15G1226500.v1.1
prunus_persica Prupe.7G188700_v2.0.a1 Prupe.7G188700_v2.0.a1 Prupe.7G188700_v2.0.a1 Prupe.8G183000_v2.0.a1
pyrus_communis pycom05g14000 pycom10g12440 pycom15g20140
rosa_chinensis RchiOBHm_Chr2g0096621 RchiOBHm_Chr6g0281601 RchiOBHm_Chr6g0281651 RchiOBHm_Chr7g0212121
rosa_laevigata RLG00000002926 RLG00000002927 RLG00000002933 RLG00000008638 RLG00000012954 RLG00000012955 RLG00000016656
rosa_multiflora Rmu_co8091766.1_g000001 Rmu_co8287847.1_g000001 Rmu_co8297221.1_g000001 Rmu_co8485327.1_g000001 Rmu_co8512767.1_g000001 Rmu_sc0002316.1_g000041 Rmu_sc0003565.1_g000009 Rmu_sc0014556.1_g000004 Rmu_sc0027573.1_g000001 Rmu_sc0030028.1_g000001
rosa_roxburghii Rroxscaffold_1G00026540 Rroxscaffold_2G00145470 Rroxscaffold_3G00247100 Rroxscaffold_3G00247110 Rroxscaffold_3G00247120 Rroxscaffold_5G00362680 Rroxscaffold_5G00362710 Rroxscaffold_7G00186950
rosa_rugosa Rorug02G0059000 Rorug02G0059100 Rorug06G0142300 Rorug07G0131000 Rorug07G0131100
rosa_samantha Rh1DG155700 Rh2AG106500 Rh2AG171500 Rh2BG108800 Rh2BG178900 Rh2CG110600 Rh2CG176400 Rh2DG110100 Rh2DG177600 Rh4BG120600 Rh6BG258300 Rh6CG257100 Rh6DG249200 Rh6DG249300 Rh7AG264100 Rh7AG264200 Rh7BG257800 Rh7BG257900 Rh7BG258000 Rh7BG258100 Rh7CG280600 Rh7CG280700 Rh7DG270600
rosa_wichuraiana Rw2G008240 Rw6G022110 Rw7G022540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 25
AatII GACGTC 2 cut(s) 23, 2078
Acc65I GGTACC 1 cut(s) 671
AccB1I GGYRCC 2 cut(s) 671, 1341
AccBSI CCGCTC 1 cut(s) 273
AccI GTMKAC 2 cut(s) 863, 1371
AccII CGCG 7 cut(s) 449, 860, 875, 974, 989, 1827, 2128
AclWI GGATC 1 cut(s) 701
AcoI YGGCCR 3 cut(s) 471, 735, 1757
AcsI RAATTY 1 cut(s) 1241
AcuI CTGAAG 1 cut(s) 77
AcvI CACGTG 2 cut(s) 361, 1698
AcyI GRCGYC 4 cut(s) 20, 365, 1058, 2075
AfaI GTAC 8 cut(s) 139, 673, 1037, 1454, 1505, 1625, 1661, 2071
AfiI CCNNNNNNNGG 9 cut(s) 427, 428, 469, 761, 1440, 1578, 1579, 1925, 1986
AgsI TTSAA 7 cut(s) 268, 373, 612, 961, 1123, 1132, 1567
AjnI CCWGG 6 cut(s) 421, 432, 779, 925, 1011, 2081
AjuI GAANNNNNNNTTGG 2 cut(s) 518, 550
Alw21I GWGCWC 6 cut(s) 198, 552, 885, 1290, 1635, 1734
Alw26I GTCTC 5 cut(s) 147, 407, 513, 1412, 1521
AlwI GGATC 1 cut(s) 701
Ama87I CYCGRG 5 cut(s) 1248, 1577, 1634, 1670, 1986
ApeKI GCWGC 9 cut(s) 42, 61, 91, 100, 103, 110, 344, 1207, 1392
ApoI RAATTY 1 cut(s) 1241
Asp700I GAANNNNTTC 1 cut(s) 1148
Asp718I GGTACC 1 cut(s) 671
AspA2I CCTAGG 1 cut(s) 1435
AspLEI GCGC 6 cut(s) 226, 451, 875, 1084, 1827, 2130
AsuHPI GGTGA 3 cut(s) 250, 1246, 1282
AsuNHI GCTAGC 1 cut(s) 1538
AvaI CYCGRG 5 cut(s) 1248, 1577, 1634, 1670, 1986
AvaII GGWCC 4 cut(s) 618, 1764, 1990, 2121
AvrII CCTAGG 1 cut(s) 1435
AxyI CCTNAGG 1 cut(s) 2037
BaeGI GKGCMC 4 cut(s) 987, 1103, 1652, 1986
BanI GGYRCC 2 cut(s) 671, 1341
BanII GRGCYC 5 cut(s) 552, 885, 972, 1290, 1635
BarI GAAGNNNNNNTAC 2 cut(s) 1607, 1639
BauI CACGAG 1 cut(s) 1596
BbrPI CACGTG 2 cut(s) 361, 1698
BbsI GAAGAC 4 cut(s) 21, 277, 1085, 1622
Bbv12I GWGCWC 6 cut(s) 198, 552, 885, 1290, 1635, 1734
BbvI GCAGC 9 cut(s) 29, 73, 78, 87, 90, 122, 356, 1194, 1404
BccI CCATC 5 cut(s) 509, 551, 894, 1332, 2002
BceAI ACGGC 8 cut(s) 96, 401, 424, 718, 1405, 1744, 1772, 1823
BcgI CGANNNNNNTGC 1 cut(s) 37
BciT130I CCWGG 6 cut(s) 423, 434, 781, 927, 1013, 2083
BcoDI GTCTC 5 cut(s) 147, 407, 513, 1412, 1521
BfaI CTAG 3 cut(s) 1436, 1539, 1553
BfmI CTRYAG 1 cut(s) 342
BfoI RGCGCY 2 cut(s) 227, 1085
BlnI CCTAGG 1 cut(s) 1435
BlpI GCTNAGC 2 cut(s) 1284, 1629
Bme18I GGWCC 4 cut(s) 618, 1764, 1990, 2121
BmeT110I CYCGRG 5 cut(s) 1248, 1577, 1634, 1670, 1986
BmrI ACTGGG 1 cut(s) 788
BmsI GCATC 4 cut(s) 112, 606, 1327, 1825
BmtI GCTAGC 1 cut(s) 1542
BmuI ACTGGG 1 cut(s) 788
BpiI GAAGAC 4 cut(s) 21, 277, 1085, 1622
BplI GAGNNNNNCTC 2 cut(s) 1604, 1636
BpmI CTGGAG 2 cut(s) 212, 2008
Bpu10I CCTNAGC 1 cut(s) 274
Bpu1102I GCTNAGC 2 cut(s) 1284, 1629
BpuEI CTTGAG 4 cut(s) 803, 1070, 1244, 2111
BsaAI YACGTR 3 cut(s) 361, 1698, 1867
BsaHI GRCGYC 4 cut(s) 20, 365, 1058, 2075
BsaI GGTCTC 2 cut(s) 513, 1521
BsaWI WCCGGW 2 cut(s) 615, 668
BsaXI ACNNNNNCTCC 4 cut(s) 1476, 1506, 1553, 1583
Bsc4I CCNNNNNNNGG 9 cut(s) 427, 428, 469, 761, 1440, 1578, 1579, 1925, 1986
Bse118I RCCGGY 4 cut(s) 71, 106, 202, 1302
Bse1I ACTGG 3 cut(s) 718, 794, 2123
Bse21I CCTNAGG 1 cut(s) 2037
Bse3DI GCAATG 1 cut(s) 2155
BseBI CCWGG 6 cut(s) 423, 434, 781, 927, 1013, 2083
BseGI GGATG 4 cut(s) 649, 1343, 1840, 1994
BseLI CCNNNNNNNGG 9 cut(s) 427, 428, 469, 761, 1440, 1578, 1579, 1925, 1986
BseMI GCAATG 1 cut(s) 2155
BseMII CTCAG 5 cut(s) 148, 288, 1275, 1620, 2028
BseNI ACTGG 3 cut(s) 718, 794, 2123
BseSI GKGCMC 4 cut(s) 987, 1103, 1652, 1986
BseX3I CGGCCG 1 cut(s) 1757
BseXI GCAGC 9 cut(s) 29, 73, 78, 87, 90, 122, 356, 1194, 1404
BseYI CCCAGC 1 cut(s) 1852
Bsh1236I CGCG 7 cut(s) 449, 860, 875, 974, 989, 1827, 2128
Bsh1285I CGRYCG 4 cut(s) 867, 879, 1760, 1923
BshNI GGYRCC 2 cut(s) 671, 1341
BsiEI CGRYCG 4 cut(s) 867, 879, 1760, 1923
BsiHKAI GWGCWC 6 cut(s) 198, 552, 885, 1290, 1635, 1734
BsiHKCI CYCGRG 5 cut(s) 1248, 1577, 1634, 1670, 1986
BsiWI CGTACG 1 cut(s) 1623
BslFI GGGAC 3 cut(s) 404, 1595, 1976
BslI CCNNNNNNNGG 9 cut(s) 427, 428, 469, 761, 1440, 1578, 1579, 1925, 1986
BsmAI GTCTC 5 cut(s) 147, 407, 513, 1412, 1521
BsmBI CGTCTC 3 cut(s) 147, 407, 1412
BsmFI GGGAC 3 cut(s) 404, 1595, 1976
BsmI GAATGC 1 cut(s) 1362
Bso31I GGTCTC 2 cut(s) 513, 1521
BsoBI CYCGRG 5 cut(s) 1248, 1577, 1634, 1670, 1986
Bsp1407I TGTACA 1 cut(s) 1035
Bsp143I GATC 6 cut(s) 210, 231, 657, 693, 876, 1920
Bsp1720I GCTNAGC 2 cut(s) 1284, 1629
BspCNI CTCAG 5 cut(s) 147, 287, 1276, 1621, 2029
BspFNI CGCG 7 cut(s) 449, 860, 875, 974, 989, 1827, 2128
BspMAI CTGCAG 1 cut(s) 346
BspOI GCTAGC 1 cut(s) 1542
BspPI GGATC 1 cut(s) 701
BspT107I GGYRCC 2 cut(s) 671, 1341
BspTNI GGTCTC 2 cut(s) 513, 1521
BsrBI CCGCTC 1 cut(s) 273
BsrDI GCAATG 1 cut(s) 2155
BsrFI RCCGGY 4 cut(s) 71, 106, 202, 1302
BsrGI TGTACA 1 cut(s) 1035
BsrI ACTGG 3 cut(s) 718, 794, 2123
BssAI RCCGGY 4 cut(s) 71, 106, 202, 1302
BssMI GATC 6 cut(s) 210, 231, 657, 693, 876, 1920
BssNI GRCGYC 4 cut(s) 20, 365, 1058, 2075
BssSI CACGAG 1 cut(s) 1596
BssT1I CCWWGG 2 cut(s) 1435, 1602
Bst2BI CACGAG 1 cut(s) 1596
Bst2UI CCWGG 6 cut(s) 423, 434, 781, 927, 1013, 2083
Bst4CI ACNGT 3 cut(s) 482, 631, 913
Bst6I CTCTTC 1 cut(s) 269
BstACI GRCGYC 4 cut(s) 20, 365, 1058, 2075
BstAUI TGTACA 1 cut(s) 1035
BstBAI YACGTR 3 cut(s) 361, 1698, 1867
BstDEI CTNAG 5 cut(s) 134, 274, 1284, 1629, 2037
BstDSI CCRYGG 2 cut(s) 987, 1760
BstF5I GGATG 4 cut(s) 649, 1343, 1840, 1994
BstFNI CGCG 7 cut(s) 449, 860, 875, 974, 989, 1827, 2128
BstH2I RGCGCY 2 cut(s) 227, 1085
BstHHI GCGC 6 cut(s) 226, 451, 875, 1084, 1827, 2130
BstKTI GATC 6 cut(s) 213, 234, 660, 696, 879, 1923
BstMAI GTCTC 5 cut(s) 147, 407, 513, 1412, 1521
BstMBI GATC 6 cut(s) 210, 231, 657, 693, 876, 1920
BstMCI CGRYCG 4 cut(s) 867, 879, 1760, 1923
BstMWI GCNNNNNNNGC 8 cut(s) 61, 97, 100, 1472, 1877, 1900, 2136, 2145
BstNI CCWGG 6 cut(s) 423, 434, 781, 927, 1013, 2083
BstNSI RCATGY 1 cut(s) 1915
BstSFI CTRYAG 1 cut(s) 342
BstSLI GKGCMC 4 cut(s) 987, 1103, 1652, 1986
BstUI CGCG 7 cut(s) 449, 860, 875, 974, 989, 1827, 2128
BstV1I GCAGC 9 cut(s) 29, 73, 78, 87, 90, 122, 356, 1194, 1404
BstV2I GAAGAC 4 cut(s) 21, 277, 1085, 1622
BstXI CCANNNNNNTGG 2 cut(s) 1352, 1412
BstZI CGGCCG 1 cut(s) 1757
Bsu36I CCTNAGG 1 cut(s) 2037
BtgI CCRYGG 2 cut(s) 987, 1760
BtgZI GCGATG 1 cut(s) 430
BtsCI GGATG 4 cut(s) 649, 1343, 1840, 1994
CfoI GCGC 6 cut(s) 226, 451, 875, 1084, 1827, 2130
Cfr10I RCCGGY 4 cut(s) 71, 106, 202, 1302
Cfr42I CCGCGG 1 cut(s) 990
Cfr9I CCCGGG 2 cut(s) 1248, 1986
CseI GACGC 3 cut(s) 354, 849, 1047
Csp6I GTAC 8 cut(s) 138, 672, 1036, 1453, 1504, 1624, 1660, 2070
CspCI CAANNNNNGTGG 2 cut(s) 1742, 1777
CviAII CATG 5 cut(s) 49, 592, 685, 1381, 1912
CviQI GTAC 8 cut(s) 138, 672, 1036, 1453, 1504, 1624, 1660, 2070
DdeI CTNAG 5 cut(s) 134, 274, 1284, 1629, 2037
DpnI GATC 6 cut(s) 212, 233, 659, 695, 878, 1922
DpnII GATC 6 cut(s) 210, 231, 657, 693, 876, 1920
DraI TTTAAA 2 cut(s) 562, 2002
DrdI GACNNNNNNGTC 1 cut(s) 25
DseDI GACNNNNNNGTC 1 cut(s) 25
EaeI YGGCCR 3 cut(s) 471, 735, 1757
EagI CGGCCG 1 cut(s) 1757
Eam1104I CTCTTC 1 cut(s) 269
EarI CTCTTC 1 cut(s) 269
EciI GGCGGA 6 cut(s) 235, 403, 1060, 1194, 1468, 1886
Ecl136II GAGCTC 4 cut(s) 550, 883, 1288, 1633
EclXI CGGCCG 1 cut(s) 1757
Eco130I CCWWGG 2 cut(s) 1435, 1602
Eco24I GRGCYC 5 cut(s) 552, 885, 972, 1290, 1635
Eco31I GGTCTC 2 cut(s) 513, 1521
Eco32I GATATC 1 cut(s) 2097
Eco47I GGWCC 4 cut(s) 618, 1764, 1990, 2121
Eco52I CGGCCG 1 cut(s) 1757
Eco53kI GAGCTC 4 cut(s) 550, 883, 1288, 1633
Eco57I CTGAAG 1 cut(s) 77
Eco72I CACGTG 2 cut(s) 361, 1698
Eco81I CCTNAGG 1 cut(s) 2037
Eco88I CYCGRG 5 cut(s) 1248, 1577, 1634, 1670, 1986
EcoICRI GAGCTC 4 cut(s) 550, 883, 1288, 1633
EcoO109I RGGNCCY 2 cut(s) 430, 1990
EcoRII CCWGG 6 cut(s) 421, 432, 779, 925, 1011, 2081
EcoRV GATATC 1 cut(s) 2097
EcoT14I CCWWGG 2 cut(s) 1435, 1602
EcoT38I GRGCYC 5 cut(s) 552, 885, 972, 1290, 1635
ErhI CCWWGG 2 cut(s) 1435, 1602
Esp3I CGTCTC 3 cut(s) 147, 407, 1412
FaeI CATG 5 cut(s) 52, 595, 688, 1384, 1915
FalI AAGNNNNNCTT 2 cut(s) 1259, 1291
FaqI GGGAC 3 cut(s) 404, 1595, 1976
FatI CATG 5 cut(s) 48, 591, 684, 1380, 1911
FauI CCCGC 5 cut(s) 994, 1010, 1580, 2014, 2133
FblI GTMKAC 2 cut(s) 863, 1371
FokI GGATG 4 cut(s) 656, 1350, 1847, 1981
FriOI GRGCYC 5 cut(s) 552, 885, 972, 1290, 1635
FspBI CTAG 3 cut(s) 1436, 1539, 1553
GlaI GCGC 6 cut(s) 225, 450, 874, 1083, 1826, 2129
GsaI CCCAGC 1 cut(s) 1856
GsuI CTGGAG 2 cut(s) 212, 2008
HaeII RGCGCY 2 cut(s) 227, 1085
HgaI GACGC 3 cut(s) 354, 849, 1047
HhaI GCGC 6 cut(s) 226, 451, 875, 1084, 1827, 2130
Hin1I GRCGYC 4 cut(s) 20, 365, 1058, 2075
Hin1II CATG 5 cut(s) 52, 595, 688, 1384, 1915
Hin6I GCGC 6 cut(s) 224, 449, 873, 1082, 1825, 2128
HinP1I GCGC 6 cut(s) 224, 449, 873, 1082, 1825, 2128
HincII GTYRAC 2 cut(s) 864, 1754
HindII GTYRAC 2 cut(s) 864, 1754
HphI GGTGA 3 cut(s) 250, 1246, 1282
Hpy166II GTNNAC 4 cut(s) 864, 1372, 1754, 1764
Hpy188III TCNNGA 8 cut(s) 229, 310, 335, 385, 655, 691, 1087, 2182
Hpy8I GTNNAC 4 cut(s) 864, 1372, 1754, 1764
HpyAV CCTTC 5 cut(s) 172, 675, 1042, 1129, 1814
HpyCH4III ACNGT 3 cut(s) 482, 631, 913
HpyCH4IV ACGT 8 cut(s) 20, 140, 360, 393, 726, 1697, 1866, 2075
HpyCH4V TGCA 5 cut(s) 14, 344, 1813, 1911, 1915
HpyF10VI GCNNNNNNNGC 8 cut(s) 61, 97, 100, 1472, 1877, 1900, 2136, 2145
HpyF3I CTNAG 5 cut(s) 134, 274, 1284, 1629, 2037
HpySE526I ACGT 8 cut(s) 20, 140, 360, 393, 726, 1697, 1866, 2075
Hsp92I GRCGYC 4 cut(s) 20, 365, 1058, 2075
Hsp92II CATG 5 cut(s) 52, 595, 688, 1384, 1915
HspAI GCGC 6 cut(s) 224, 449, 873, 1082, 1825, 2128
KflI GGGWCCC 1 cut(s) 1990
KpnI GGTACC 1 cut(s) 675
KroI GCCGGC 2 cut(s) 106, 202
KroNI GCCGGC 2 cut(s) 108, 204
KspI CCGCGG 1 cut(s) 990
Kzo9I GATC 6 cut(s) 210, 231, 657, 693, 876, 1920
LmnI GCTCC 7 cut(s) 201, 231, 416, 870, 916, 1311, 1443
Lsp1109I GCAGC 9 cut(s) 29, 73, 78, 87, 90, 122, 356, 1194, 1404
LweI GCATC 4 cut(s) 112, 606, 1327, 1825
MaeI CTAG 3 cut(s) 1436, 1539, 1553
MaeII ACGT 8 cut(s) 20, 140, 360, 393, 726, 1697, 1866, 2075
MaeIII GTNAC 1 cut(s) 2171
MalI GATC 6 cut(s) 212, 233, 659, 695, 878, 1922
MbiI CCGCTC 1 cut(s) 273
MboI GATC 6 cut(s) 210, 231, 657, 693, 876, 1920
MfeI CAATTG 1 cut(s) 886
MluCI AATT 8 cut(s) 373, 607, 886, 1127, 1147, 1166, 1241, 1784
MlyI GAGTC 6 cut(s) 236, 291, 719, 1099, 1550, 1712
MmeI TCCRAC 6 cut(s) 621, 645, 1041, 1421, 1584, 1812
MroNI GCCGGC 2 cut(s) 106, 202
MroXI GAANNNNTTC 1 cut(s) 1148
MseI TTAA 4 cut(s) 390, 561, 2001, 2188
MslI CAYNNNNRTG 1 cut(s) 1350
MspA1I CMGCKG 3 cut(s) 42, 64, 989
MunI CAATTG 1 cut(s) 886
Mva1269I GAATGC 1 cut(s) 1362
MvaI CCWGG 6 cut(s) 423, 434, 781, 927, 1013, 2083
MvnI CGCG 7 cut(s) 449, 860, 875, 974, 989, 1827, 2128
MwoI GCNNNNNNNGC 8 cut(s) 61, 97, 100, 1472, 1877, 1900, 2136, 2145
NaeI GCCGGC 2 cut(s) 108, 204
NdeII GATC 6 cut(s) 210, 231, 657, 693, 876, 1920
NgoMIV GCCGGC 2 cut(s) 106, 202
NheI GCTAGC 1 cut(s) 1538
NlaIII CATG 5 cut(s) 52, 595, 688, 1384, 1915
NmeAIII GCCGAG 2 cut(s) 763, 1906
NmuCI GTSAC 1 cut(s) 2171
NspI RCATGY 1 cut(s) 1915
PaeI GCATGC 1 cut(s) 1915
PaeR7I CTCGAG 1 cut(s) 1634
PcsI WCGNNNNNNNCGW 8 cut(s) 23, 162, 357, 414, 510, 579, 1632, 2069
PctI GAATGC 1 cut(s) 1362
PdiI GCCGGC 2 cut(s) 108, 204
PdmI GAANNNNTTC 1 cut(s) 1148
PfeI GAWTC 5 cut(s) 323, 329, 338, 904, 1719
Pfl23II CGTACG 1 cut(s) 1623
PflFI GACNNNGTC 2 cut(s) 22, 2077
Ple19I CGATCG 2 cut(s) 879, 1923
PleI GAGTC 6 cut(s) 236, 290, 718, 1098, 1550, 1711
PmaCI CACGTG 2 cut(s) 361, 1698
PmlI CACGTG 2 cut(s) 361, 1698
PpsI GAGTC 6 cut(s) 236, 290, 718, 1098, 1550, 1711
Ppu21I YACGTR 3 cut(s) 361, 1698, 1867
PpuMI RGGWCCY 1 cut(s) 1990
Psp124BI GAGCTC 4 cut(s) 552, 885, 1290, 1635
Psp5II RGGWCCY 1 cut(s) 1990
Psp6I CCWGG 6 cut(s) 421, 432, 779, 925, 1011, 2081
PspCI CACGTG 2 cut(s) 361, 1698
PspFI CCCAGC 1 cut(s) 1852
PspGI CCWGG 6 cut(s) 421, 432, 779, 925, 1011, 2081
PspLI CGTACG 1 cut(s) 1623
PspPPI RGGWCCY 1 cut(s) 1990
PspXI VCTCGAGB 1 cut(s) 1634
PstI CTGCAG 1 cut(s) 346
PsyI GACNNNGTC 2 cut(s) 22, 2077
PvuI CGATCG 2 cut(s) 879, 1923
PvuII CAGCTG 2 cut(s) 42, 64
RsaI GTAC 8 cut(s) 139, 673, 1037, 1454, 1505, 1625, 1661, 2071
RsaNI GTAC 8 cut(s) 138, 672, 1036, 1453, 1504, 1624, 1660, 2070
RseI CAYNNNNRTG 1 cut(s) 1350
SacI GAGCTC 4 cut(s) 552, 885, 1290, 1635
SacII CCGCGG 1 cut(s) 990
SalI GTCGAC 1 cut(s) 862
SaqAI TTAA 4 cut(s) 390, 561, 2001, 2188
Sau3AI GATC 6 cut(s) 210, 231, 657, 693, 876, 1920
SchI GAGTC 6 cut(s) 236, 291, 719, 1099, 1550, 1712
SfaNI GCATC 4 cut(s) 112, 606, 1327, 1825
SfcI CTRYAG 1 cut(s) 342
Sfr274I CTCGAG 1 cut(s) 1634
Sfr303I CCGCGG 1 cut(s) 990
SgrBI CCGCGG 1 cut(s) 990
SinI GGWCC 4 cut(s) 618, 1764, 1990, 2121
SlaI CTCGAG 1 cut(s) 1634
SmaI CCCGGG 2 cut(s) 1250, 1988
SmiMI CAYNNNNRTG 1 cut(s) 1350
SmlI CTYRAG 5 cut(s) 818, 1085, 1259, 1634, 2090
SmoI CTYRAG 5 cut(s) 818, 1085, 1259, 1634, 2090
SphI GCATGC 1 cut(s) 1915
Sse9I AATT 8 cut(s) 373, 607, 886, 1127, 1147, 1166, 1241, 1784
SspI AATATT 1 cut(s) 1072
SspMI CTAG 3 cut(s) 1436, 1539, 1553
SstI GAGCTC 4 cut(s) 552, 885, 1290, 1635
StyI CCWWGG 2 cut(s) 1435, 1602
TaaI ACNGT 3 cut(s) 482, 631, 913
TaiI ACGT 8 cut(s) 23, 143, 363, 396, 729, 1700, 1869, 2078
TasI AATT 8 cut(s) 373, 607, 886, 1127, 1147, 1166, 1241, 1784
TatI WGTACW 1 cut(s) 1035
TauI GCSGC 6 cut(s) 473, 708, 860, 1045, 1055, 1058
TfiI GAWTC 5 cut(s) 323, 329, 338, 904, 1719
Tru1I TTAA 4 cut(s) 390, 561, 2001, 2188
Tru9I TTAA 4 cut(s) 390, 561, 2001, 2188
TseFI GTSAC 1 cut(s) 2171
TseI GCWGC 9 cut(s) 42, 61, 91, 100, 103, 110, 344, 1207, 1392
Tsp45I GTSAC 1 cut(s) 2171
TspDTI ATGAA 3 cut(s) 65, 1369, 1777
TspGWI ACGGA 3 cut(s) 366, 1436, 1731
TspMI CCCGGG 2 cut(s) 1248, 1986
Tth111I GACNNNGTC 2 cut(s) 22, 2077
VpaK11BI GGWCC 4 cut(s) 618, 1764, 1990, 2121
XapI RAATTY 1 cut(s) 1241
XceI RCATGY 1 cut(s) 1915
XcmI CCANNNNNNNNNTGG 1 cut(s) 1393
XhoI CTCGAG 1 cut(s) 1634
XmaI CCCGGG 2 cut(s) 1248, 1986
XmaJI CCTAGG 1 cut(s) 1435
XmiI GTMKAC 2 cut(s) 863, 1371
XmnI GAANNNNTTC 1 cut(s) 1148
XspI CTAG 3 cut(s) 1436, 1539, 1553
ZraI GACGTC 2 cut(s) 21, 2076
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.