Rw6G022110

L-type lectin-domain containing receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000688
Physical Location & Seq
Forward (+)
43821269 .. 43824049
2781 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G022110.1

Sequence Viewer

Length: 1992 bp
ATGGTTTTTTCTCAAAGATTATCAATCATCTACTTGGTTTTCACCTTTGCCATAATTTTTGTAGCATCAGCAGCTGATCCTAGGCAATTCCCCTTTACCACATTCAGTGAAAAAACTGACCAATCTGTATTCCATTTCACGGATTATTCATCCATTGATCAAGGGGCACTTCAGTTAACCCCAGACACTGAGAATGCAGACGGCGGCTATTTTAACAAGTCCGGCAGGATCATGTATGACAAACCTTATAGACTCTGGTCATCTGACAATGAAGACGATGATGATGTTGCCTCCTTCAACTCGACTTTCGTCATGAACATCTACCGTCAGAAAGGCTGGACTGTTGGTGAAGGGTTTGCTTTTCTTATAGCCTCGGATTTGAACATGCCTGAACCAAGTTATGGGCAGTGGCTAGGCCTCACCAGTGCCACCACTGATGGTAATGCTACAAACCACATGGTTGCCATAGAATTCGACACAAGAAAGCAAGATTTCGACCCCGATGACAACCATATAGGCCTCAACATCAACTCTGTAAGATCAAGTAAGACTGTTTCTCTTGAGCCTTTCGACATTGAGATATCACCGGAGGTAGGCACCAACTACACCGTGTGGGTGCAATACAATGGCAGCTCAAAAGTCATTGAAGTCTACATGGCTAAGCGCATCATAAACATCCCACCAGTAAGGCCGGAGACACCACTTATGAGGGAGCCAATAAACTTGAAACAATATCTAAAACAAGACTCCTACTTTGGATTTTCTGGTTCCACAGGTAGCACGGCTAAACAGCTAAACTGTGTTTTGGAATGGAATCTAGTGGTTCATGAATTCAAGACCAGAAAGGATATGACTTTGTTGAAGATCGGTGTGCCAGCATTGGTTTTGTTAGCAGTATTTGGTGTTATTTTGGGAGTTGGGTATGTCAAGAAGAGGAAAAGAACCAGTCTTGAGGAGTCCATTGTGGTCGGGACACTGAAGAGGTTGCCAGGGATGCCGAGGGAGTTCAAGTACAAAGAGCTCAAGGATGCAACTAATAATTTCCATGCGAGCATGATCCTGGGACAAGGTGGTTTTGGCGTTGTTTACAGAGGGACTCTGCGTGATTTTGATGGTGCAAATGCTACTAATGAGTCTGCAGAAATTGCTGTCAAGCAATTCTCAAGAGATAACATCAAAGGCAAAGATGATTTCATGGCAGAACTAACCATTATTCACCGCCTTCGCCACAAAAATCTTGTCCGGTTAGTAGGATGGTGCTATGAGAAAGGAAAGCTTCTTTTAGTATATGATTTCATGCCAAATGGTAGCGTTGATAGGCACCTATATAAAGCTTCAAACCAGAATACACTCAATTGGGAGCATCGATGCAAGATCCTAGCTGGTGTGGCGTCAGCTTTGCATTATCTGCAAAATGAGTATGATCAAAAAGTGGTGCACCGTGACCTCAAAGCTAGTAACATATTGCTTGACTCTGAGTTCAATGCTCGCCTTGGAGACTTTGGCCTTGCCCGAGCCTTGGAACAAGAGAGGAACTCATATGCTGAACTAGAACTAGCAGGAGTTGCGGGTACCCTGGGCTATGTTGCTCCAGAGTGCTTCCATACAAGGAAGGCTACTCCAGAATCTGATGTTTTCAGTTTCGGGGCGGTTGTGCTTGAAATTGTGTGTGGGAAAAGTCCTGGGATTCAGATTATTCATGGACAACACCAGTTTTCTTTGGTCGATTGGGTGTGGATGTTGCATCGAGAAGGATGTATTGAGGAAGCTCAAAGAAGCTTTTGTCTTGGATTGGCGTGTTCACATCCTATTGCTAGTGAGCGGCCTCAAACACAAGCCATATGCCAGATTATATCCGGAACCATGTCAGTCCCTAGTGTGCCTCCATTCAAGCCTGTTTTCACATGGCCTTCCATGGGTACCGCATATAGCAGCACTGACAGTACAGTTTCTAACGTCACTCTTTCTAGGATCACAGTATCTCTTCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase Pkinase_Tyr

Protein Analysis

663

Amino Acids

74.26

Weight (kDa)

6.18

Isoelectric Point (pI)

41.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 29 - 284 1e-65 Legume lectin domain
Pkinase PF00069 349 - 563 1.6e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 352 - 616 4.9e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000688)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09820 FvH4_2g17160 FvH4_2g17160
malus_domestica MD02G1107100.v1.1 MD02G1107300.v1.1 MD05G1144900.v1.1 MD10G1144700.v1.1 MD15G1226500.v1.1
prunus_persica Prupe.7G188700_v2.0.a1 Prupe.7G188700_v2.0.a1 Prupe.7G188700_v2.0.a1 Prupe.8G183000_v2.0.a1
pyrus_communis pycom05g14000 pycom10g12440 pycom15g20140
rosa_chinensis RchiOBHm_Chr2g0096621 RchiOBHm_Chr6g0281601 RchiOBHm_Chr6g0281651 RchiOBHm_Chr7g0212121
rosa_laevigata RLG00000002926 RLG00000002927 RLG00000002933 RLG00000008638 RLG00000012954 RLG00000012955 RLG00000016656
rosa_multiflora Rmu_co8091766.1_g000001 Rmu_co8287847.1_g000001 Rmu_co8297221.1_g000001 Rmu_co8485327.1_g000001 Rmu_co8512767.1_g000001 Rmu_sc0002316.1_g000041 Rmu_sc0003565.1_g000009 Rmu_sc0014556.1_g000004 Rmu_sc0027573.1_g000001 Rmu_sc0030028.1_g000001
rosa_roxburghii Rroxscaffold_1G00026540 Rroxscaffold_2G00145470 Rroxscaffold_3G00247100 Rroxscaffold_3G00247110 Rroxscaffold_3G00247120 Rroxscaffold_5G00362680 Rroxscaffold_5G00362710 Rroxscaffold_7G00186950
rosa_rugosa Rorug02G0059000 Rorug02G0059100 Rorug06G0142300 Rorug07G0131000 Rorug07G0131100
rosa_samantha Rh1DG155700 Rh2AG106500 Rh2AG171500 Rh2BG108800 Rh2BG178900 Rh2CG110600 Rh2CG176400 Rh2DG110100 Rh2DG177600 Rh4BG120600 Rh6BG258300 Rh6CG257100 Rh6DG249200 Rh6DG249300 Rh7AG264100 Rh7AG264200 Rh7BG257800 Rh7BG257900 Rh7BG258000 Rh7BG258100 Rh7CG280600 Rh7CG280700 Rh7DG270600
rosa_wichuraiana Rw2G008240 Rw6G022110 Rw7G022540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 1571, 1919
AccB1I GGYRCC 4 cut(s) 596, 1320, 1571, 1919
AccB7I CCANNNNNTGG 1 cut(s) 401
AccBSI CCGCTC 1 cut(s) 1822
AccI GTMKAC 1 cut(s) 651
AccIII TCCGGA 1 cut(s) 1856
AciI CCGC 6 cut(s) 204, 1219, 1568, 1649, 1822, 1923
AclWI GGATC 5 cut(s) 71, 236, 1051, 1369, 1979
AcsI RAATTY 2 cut(s) 470, 830
AcuI CTGAAG 2 cut(s) 155, 998
AcyI GRCGYC 1 cut(s) 1391
AdeI CACNNNGTG 1 cut(s) 612
AfaI GTAC 4 cut(s) 1013, 1573, 1921, 1945
AfiI CCNNNNNNNGG 5 cut(s) 139, 401, 593, 1519, 1916
AjnI CCWGG 4 cut(s) 988, 1059, 1575, 1681
Alw21I GWGCWC 2 cut(s) 1023, 1440
Alw26I GTCTC 2 cut(s) 689, 1491
Alw44I GTGCAC 1 cut(s) 1436
AlwI GGATC 5 cut(s) 71, 236, 1051, 1369, 1979
AlwNI CAGNNNCTG 3 cut(s) 74, 188, 1628
Ama87I CYCGRG 1 cut(s) 1512
Aor13HI TCCGGA 1 cut(s) 1856
AoxI GGCC 6 cut(s) 415, 517, 689, 1504, 1823, 1907
ApaLI GTGCAC 1 cut(s) 1436
ApeKI GCWGC 3 cut(s) 71, 630, 1932
ApoI RAATTY 2 cut(s) 470, 830
ArsI GACNNNNNNTTYG 4 cut(s) 737, 769, 1224, 1256
Asp718I GGTACC 2 cut(s) 1571, 1919
AspA2I CCTAGG 1 cut(s) 80
AspLEI GCGC 1 cut(s) 666
AsuHPI GGTGA 5 cut(s) 34, 359, 412, 576, 1208
AvaI CYCGRG 1 cut(s) 1512
AvrII CCTAGG 1 cut(s) 80
BaeGI GKGCMC 2 cut(s) 169, 1440
BanI GGYRCC 4 cut(s) 596, 1320, 1571, 1919
BanII GRGCYC 1 cut(s) 1023
BbsI GAAGAC 1 cut(s) 279
Bbv12I GWGCWC 2 cut(s) 1023, 1440
BbvI GCAGC 3 cut(s) 83, 642, 1944
BccI CCATC 3 cut(s) 431, 1106, 1248
BceAI ACGGC 2 cut(s) 217, 798
BciT130I CCWGG 4 cut(s) 990, 1061, 1577, 1683
BclI TGATCA 2 cut(s) 157, 1423
BcoDI GTCTC 2 cut(s) 689, 1491
BfmI CTRYAG 1 cut(s) 1137
BisI GCNGC 5 cut(s) 72, 205, 631, 1823, 1933
BlnI CCTAGG 1 cut(s) 80
BlpI GCTNAGC 1 cut(s) 660
BlsI GCNGC 5 cut(s) 73, 206, 632, 1824, 1934
Bme1390I CCNGG 4 cut(s) 990, 1061, 1577, 1683
BmeT110I CYCGRG 1 cut(s) 1512
BmiI GGNNCC 7 cut(s) 598, 714, 769, 1322, 1573, 1861, 1921
BmrFI CCNGG 4 cut(s) 990, 1061, 1577, 1683
BmsI GCATC 7 cut(s) 74, 675, 984, 1018, 1358, 1372, 1753
BoxI GACNNNNGTC 2 cut(s) 256, 308
BpiI GAAGAC 1 cut(s) 279
BplI GAGNNNNNCTC 2 cut(s) 1520, 1552
BpmI CTGGAG 2 cut(s) 1575, 1605
Bpu1102I GCTNAGC 1 cut(s) 660
BpuEI CTTGAG 4 cut(s) 581, 971, 1007, 1147
Bsa29I ATCGAT 1 cut(s) 1366
BsaHI GRCGYC 1 cut(s) 1391
BsaWI WCCGGW 3 cut(s) 586, 1242, 1856
BsaXI ACNNNNNCTCC 2 cut(s) 995, 1025
Bsc4I CCNNNNNNNGG 5 cut(s) 139, 401, 593, 1519, 1916
Bse1I ACTGG 4 cut(s) 423, 683, 945, 1711
BseAI TCCGGA 1 cut(s) 1856
BseBI CCWGG 4 cut(s) 990, 1061, 1577, 1683
BseCI ATCGAT 1 cut(s) 1366
BseGI GGATG 8 cut(s) 149, 675, 999, 1033, 1259, 1743, 1760, 1804
BseLI CCNNNNNNNGG 5 cut(s) 139, 401, 593, 1519, 1916
BseMII CTCAG 2 cut(s) 180, 1467
BseNI ACTGG 4 cut(s) 423, 683, 945, 1711
BseRI GAGGAG 1 cut(s) 968
BseSI GKGCMC 2 cut(s) 169, 1440
BseXI GCAGC 3 cut(s) 83, 642, 1944
BshFI GGCC 6 cut(s) 417, 519, 691, 1506, 1825, 1909
BshNI GGYRCC 4 cut(s) 596, 1320, 1571, 1919
BshVI ATCGAT 1 cut(s) 1366
BsiHKAI GWGCWC 2 cut(s) 1023, 1440
BsiHKCI CYCGRG 1 cut(s) 1512
BsiSI CCGG 5 cut(s) 222, 587, 692, 1243, 1857
BslFI GGGAC 4 cut(s) 985, 1077, 1108, 1856
BslI CCNNNNNNNGG 5 cut(s) 139, 401, 593, 1519, 1916
BsmAI GTCTC 2 cut(s) 689, 1491
BsmFI GGGAC 4 cut(s) 985, 1077, 1108, 1856
BsmI GAATGC 1 cut(s) 199
BsnI GGCC 6 cut(s) 417, 519, 691, 1506, 1825, 1909
BsoBI CYCGRG 1 cut(s) 1512
Bsp1286I GDGCHC 3 cut(s) 169, 1023, 1440
Bsp13I TCCGGA 1 cut(s) 1856
Bsp143I GATC 9 cut(s) 76, 157, 228, 539, 864, 1056, 1374, 1423, 1971
Bsp1720I GCTNAGC 1 cut(s) 660
Bsp19I CCATGG 1 cut(s) 1914
BspACI CCGC 6 cut(s) 204, 1219, 1568, 1649, 1822, 1923
BspANI GGCC 6 cut(s) 417, 519, 691, 1506, 1825, 1909
BspCNI CTCAG 2 cut(s) 181, 1468
BspDI ATCGAT 1 cut(s) 1366
BspEI TCCGGA 1 cut(s) 1856
BspHI TCATGA 2 cut(s) 312, 826
BspLI GGNNCC 7 cut(s) 598, 714, 769, 1322, 1573, 1861, 1921
BspMAI CTGCAG 1 cut(s) 1141
BspPI GGATC 5 cut(s) 71, 236, 1051, 1369, 1979
BspT107I GGYRCC 4 cut(s) 596, 1320, 1571, 1919
BsrBI CCGCTC 1 cut(s) 1822
BsrI ACTGG 4 cut(s) 423, 683, 945, 1711
BssMI GATC 9 cut(s) 76, 157, 228, 539, 864, 1056, 1374, 1423, 1971
BssNI GRCGYC 1 cut(s) 1391
BssT1I CCWWGG 4 cut(s) 80, 1492, 1518, 1914
Bst2UI CCWGG 4 cut(s) 990, 1061, 1577, 1683
Bst4CI ACNGT 9 cut(s) 326, 343, 553, 610, 800, 1442, 1943, 1948, 1978
Bst6I CTCTTC 3 cut(s) 926, 974, 1989
BstACI GRCGYC 1 cut(s) 1391
BstAPI GCANNNNNTGC 3 cut(s) 1145, 1408, 1565
BstC8I GCNNGC 3 cut(s) 876, 1051, 1489
BstDEI CTNAG 4 cut(s) 189, 660, 1476, 1989
BstDSI CCRYGG 1 cut(s) 1914
BstF5I GGATG 8 cut(s) 149, 675, 999, 1033, 1259, 1743, 1760, 1804
BstHHI GCGC 1 cut(s) 666
BstKTI GATC 9 cut(s) 79, 160, 231, 542, 867, 1059, 1377, 1426, 1974
BstMAI GTCTC 2 cut(s) 689, 1491
BstMBI GATC 9 cut(s) 76, 157, 228, 539, 864, 1056, 1374, 1423, 1971
BstMWI GCNNNNNNNGC 6 cut(s) 71, 994, 1145, 1388, 1408, 1565
BstNI CCWGG 4 cut(s) 990, 1061, 1577, 1683
BstNSI RCATGY 1 cut(s) 388
BstPAI GACNNNNGTC 2 cut(s) 256, 308
BstSCI CCNGG 4 cut(s) 988, 1059, 1575, 1681
BstSFI CTRYAG 1 cut(s) 1137
BstSLI GKGCMC 2 cut(s) 169, 1440
BstV1I GCAGC 3 cut(s) 83, 642, 1944
BstV2I GAAGAC 1 cut(s) 279
BstX2I RGATCY 1 cut(s) 1374
BstYI RGATCY 1 cut(s) 1374
Bsu15I ATCGAT 1 cut(s) 1366
BsuRI GGCC 6 cut(s) 417, 519, 691, 1506, 1825, 1909
BsuTUI ATCGAT 1 cut(s) 1366
BtgI CCRYGG 1 cut(s) 1914
BtsCI GGATG 8 cut(s) 149, 675, 999, 1033, 1259, 1743, 1760, 1804
BtsI GCAGTG 1 cut(s) 413
BtsIMutI CAGTG 7 cut(s) 112, 186, 413, 430, 432, 974, 1935
Cac8I GCNNGC 3 cut(s) 876, 1051, 1489
CaiI CAGNNNCTG 3 cut(s) 74, 188, 1628
CciI TCATGA 2 cut(s) 312, 826
CfoI GCGC 1 cut(s) 666
ClaI ATCGAT 1 cut(s) 1366
CseI GACGC 1 cut(s) 1380
Csp6I GTAC 4 cut(s) 1012, 1572, 1920, 1944
CviQI GTAC 4 cut(s) 1012, 1572, 1920, 1944
DdeI CTNAG 4 cut(s) 189, 660, 1476, 1989
DpnI GATC 9 cut(s) 78, 159, 230, 541, 866, 1058, 1376, 1425, 1973
DpnII GATC 9 cut(s) 76, 157, 228, 539, 864, 1056, 1374, 1423, 1971
DraIII CACNNNGTG 1 cut(s) 612
Eam1104I CTCTTC 3 cut(s) 926, 974, 1989
EarI CTCTTC 3 cut(s) 926, 974, 1989
Ecl136II GAGCTC 1 cut(s) 1021
Eco130I CCWWGG 4 cut(s) 80, 1492, 1518, 1914
Eco147I AGGCCT 2 cut(s) 417, 519
Eco24I GRGCYC 1 cut(s) 1023
Eco32I GATATC 1 cut(s) 582
Eco53kI GAGCTC 1 cut(s) 1021
Eco57I CTGAAG 2 cut(s) 155, 998
Eco88I CYCGRG 1 cut(s) 1512
EcoICRI GAGCTC 1 cut(s) 1021
EcoRI GAATTC 2 cut(s) 470, 830
EcoRII CCWGG 4 cut(s) 988, 1059, 1575, 1681
EcoRV GATATC 1 cut(s) 582
EcoT14I CCWWGG 4 cut(s) 80, 1492, 1518, 1914
EcoT38I GRGCYC 1 cut(s) 1023
ErhI CCWWGG 4 cut(s) 80, 1492, 1518, 1914
FalI AAGNNNNNCTT 4 cut(s) 153, 185, 1260, 1292
FaqI GGGAC 4 cut(s) 985, 1077, 1108, 1856
FauI CCCGC 1 cut(s) 1561
FauNDI CATATG 2 cut(s) 1540, 1841
FbaI TGATCA 2 cut(s) 157, 1423
FblI GTMKAC 1 cut(s) 651
Fnu4HI GCNGC 5 cut(s) 72, 205, 631, 1823, 1933
FokI GGATG 8 cut(s) 136, 662, 1006, 1040, 1266, 1750, 1767, 1791
FriOI GRGCYC 1 cut(s) 1023
Fsp4HI GCNGC 5 cut(s) 72, 205, 631, 1823, 1933
GlaI GCGC 1 cut(s) 665
GluI GCNGC 5 cut(s) 72, 205, 631, 1823, 1933
GsuI CTGGAG 2 cut(s) 1575, 1605
HaeIII GGCC 6 cut(s) 417, 519, 691, 1506, 1825, 1909
HapII CCGG 5 cut(s) 222, 587, 692, 1243, 1857
HgaI GACGC 1 cut(s) 1380
HhaI GCGC 1 cut(s) 666
Hin1I GRCGYC 1 cut(s) 1391
Hin6I GCGC 1 cut(s) 664
HinP1I GCGC 1 cut(s) 664
HincII GTYRAC 1 cut(s) 177
HindII GTYRAC 1 cut(s) 177
HindIII AAGCTT 3 cut(s) 1274, 1332, 1777
HinfI GANTC 9 cut(s) 252, 746, 814, 956, 1096, 1133, 1472, 1625, 1687
HpaI GTTAAC 1 cut(s) 177
HpaII CCGG 5 cut(s) 222, 587, 692, 1243, 1857
HphI GGTGA 5 cut(s) 34, 359, 412, 576, 1208
Hpy166II GTNNAC 5 cut(s) 177, 652, 1087, 1438, 1802
Hpy188I TCNGA 6 cut(s) 265, 330, 376, 1477, 1630, 1692
Hpy8I GTNNAC 5 cut(s) 177, 652, 1087, 1438, 1802
HpyAV CCTTC 6 cut(s) 304, 344, 1232, 1606, 1745, 1920
HpyCH4III ACNGT 9 cut(s) 326, 343, 553, 610, 800, 1442, 1943, 1948, 1978
HpyCH4IV ACGT 1 cut(s) 1956
HpyF10VI GCNNNNNNNGC 6 cut(s) 71, 994, 1145, 1388, 1408, 1565
HpyF3I CTNAG 4 cut(s) 189, 660, 1476, 1989
HpySE526I ACGT 1 cut(s) 1956
Hsp92I GRCGYC 1 cut(s) 1391
HspAI GCGC 1 cut(s) 664
Kpn2I TCCGGA 1 cut(s) 1856
KpnI GGTACC 2 cut(s) 1575, 1923
Ksp22I TGATCA 2 cut(s) 157, 1423
KspAI GTTAAC 1 cut(s) 177
Kzo9I GATC 9 cut(s) 76, 157, 228, 539, 864, 1056, 1374, 1423, 1971
LmnI GCTCC 3 cut(s) 712, 1360, 1594
Lsp1109I GCAGC 3 cut(s) 83, 642, 1944
LweI GCATC 7 cut(s) 74, 675, 984, 1018, 1358, 1372, 1753
MaeII ACGT 1 cut(s) 1956
MaeIII GTNAC 3 cut(s) 1442, 1457, 1957
MalI GATC 9 cut(s) 78, 159, 230, 541, 866, 1058, 1376, 1425, 1973
MbiI CCGCTC 1 cut(s) 1822
MboI GATC 9 cut(s) 76, 157, 228, 539, 864, 1056, 1374, 1423, 1971
MboII GAAGA 5 cut(s) 284, 874, 943, 991, 1976
MfeI CAATTG 1 cut(s) 1354
MflI RGATCY 1 cut(s) 1374
MhlI GDGCHC 3 cut(s) 169, 1023, 1440
MluCI AATT 9 cut(s) 54, 86, 470, 830, 1039, 1143, 1157, 1354, 1662
MlyI GAGTC 6 cut(s) 246, 740, 965, 1090, 1142, 1466
MroI TCCGGA 1 cut(s) 1856
MseI TTAA 2 cut(s) 176, 213
MspA1I CMGCKG 1 cut(s) 74
MspI CCGG 5 cut(s) 222, 587, 692, 1243, 1857
MspR9I CCNGG 4 cut(s) 990, 1061, 1577, 1683
MunI CAATTG 1 cut(s) 1354
Mva1269I GAATGC 1 cut(s) 199
MvaI CCWGG 4 cut(s) 990, 1061, 1577, 1683
MwoI GCNNNNNNNGC 6 cut(s) 71, 994, 1145, 1388, 1408, 1565
NcoI CCATGG 1 cut(s) 1914
NdeI CATATG 2 cut(s) 1540, 1841
NdeII GATC 9 cut(s) 76, 157, 228, 539, 864, 1056, 1374, 1423, 1971
NlaIV GGNNCC 7 cut(s) 598, 714, 769, 1322, 1573, 1861, 1921
NmeAIII GCCGAG 1 cut(s) 1023
NmuCI GTSAC 2 cut(s) 1442, 1957
NspI RCATGY 1 cut(s) 388
PagI TCATGA 2 cut(s) 312, 826
PasI CCCWGGG 1 cut(s) 1576
PceI AGGCCT 2 cut(s) 417, 519
PctI GAATGC 1 cut(s) 199
PfeI GAWTC 3 cut(s) 814, 1625, 1687
PflMI CCANNNNNTGG 1 cut(s) 401
PkrI GCNGC 5 cut(s) 73, 206, 632, 1824, 1934
PleI GAGTC 6 cut(s) 246, 740, 964, 1090, 1141, 1466
PpsI GAGTC 6 cut(s) 246, 740, 964, 1090, 1141, 1466
PshAI GACNNNNGTC 2 cut(s) 256, 308
Psp124BI GAGCTC 1 cut(s) 1023
Psp6I CCWGG 4 cut(s) 988, 1059, 1575, 1681
PspGI CCWGG 4 cut(s) 988, 1059, 1575, 1681
PspN4I GGNNCC 7 cut(s) 598, 714, 769, 1322, 1573, 1861, 1921
PstI CTGCAG 1 cut(s) 1141
PstNI CAGNNNCTG 3 cut(s) 74, 188, 1628
PsuI RGATCY 1 cut(s) 1374
PvuII CAGCTG 1 cut(s) 74
RsaI GTAC 4 cut(s) 1013, 1573, 1921, 1945
RsaNI GTAC 4 cut(s) 1012, 1572, 1920, 1944
SacI GAGCTC 1 cut(s) 1023
SaqAI TTAA 2 cut(s) 176, 213
SatI GCNGC 5 cut(s) 72, 205, 631, 1823, 1933
Sau3AI GATC 9 cut(s) 76, 157, 228, 539, 864, 1056, 1374, 1423, 1971
SchI GAGTC 6 cut(s) 246, 740, 965, 1090, 1142, 1466
ScrFI CCNGG 4 cut(s) 990, 1061, 1577, 1683
SduI GDGCHC 3 cut(s) 169, 1023, 1440
SfaNI GCATC 7 cut(s) 74, 675, 984, 1018, 1358, 1372, 1753
SfcI CTRYAG 1 cut(s) 1137
SmlI CTYRAG 4 cut(s) 560, 950, 1022, 1162
SmoI CTYRAG 4 cut(s) 560, 950, 1022, 1162
Sse9I AATT 9 cut(s) 54, 86, 470, 830, 1039, 1143, 1157, 1354, 1662
SseBI AGGCCT 2 cut(s) 417, 519
SsiI CCGC 6 cut(s) 204, 1219, 1568, 1649, 1822, 1923
SstI GAGCTC 1 cut(s) 1023
StuI AGGCCT 2 cut(s) 417, 519
StyD4I CCNGG 4 cut(s) 988, 1059, 1575, 1681
StyI CCWWGG 4 cut(s) 80, 1492, 1518, 1914
TaaI ACNGT 9 cut(s) 326, 343, 553, 610, 800, 1442, 1943, 1948, 1978
TaiI ACGT 1 cut(s) 1959
TaqI TCGA 7 cut(s) 302, 474, 495, 570, 1366, 1725, 1747
TasI AATT 9 cut(s) 54, 86, 470, 830, 1039, 1143, 1157, 1354, 1662
TatI WGTACW 2 cut(s) 1011, 1943
TauI GCSGC 2 cut(s) 207, 1825
TfiI GAWTC 3 cut(s) 814, 1625, 1687
Tru1I TTAA 2 cut(s) 176, 213
Tru9I TTAA 2 cut(s) 176, 213
TscAI CASTG 7 cut(s) 112, 193, 413, 430, 439, 981, 1942
TseFI GTSAC 2 cut(s) 1442, 1957
TseI GCWGC 3 cut(s) 71, 630, 1932
Tsp45I GTSAC 2 cut(s) 1442, 1957
TspDTI ATGAA 8 cut(s) 138, 285, 329, 815, 843, 1183, 1285, 1688
TspGWI ACGGA 1 cut(s) 155
TspRI CASTG 7 cut(s) 112, 193, 413, 430, 439, 981, 1942
Van91I CCANNNNNTGG 1 cut(s) 401
VneI GTGCAC 1 cut(s) 1436
XapI RAATTY 2 cut(s) 470, 830
XceI RCATGY 1 cut(s) 388
XmaJI CCTAGG 1 cut(s) 80
XmiI GTMKAC 1 cut(s) 651
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.