MD05G1144900.v1.1

L-type lectin-domain containing receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0000688
Physical Location & Seq
Forward (+)
27637410 .. 27639598
2189 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1144900.v1.1.491

Sequence Viewer

Length: 2076 bp
ATGAGGTGCTCGAAAAGAATGTTAATCACCTTCCTAGTTGCCTCTTTTGCCATAATGCTGCATTATGCTGCCATAGGTGCCGCAGCAGCGGAAGGAGCTAAGCCGAAAGATTTCCCTTTTCTTATATTTGATGAAAAAACTGACCAAAATACCTTCCACTTTACACAACATTCTTCCATTGATAAAGGGGCGCTTCAGTTAACCCCAGACAGTGAGAACCCGCAAGACTCCAAAGAAAACAAGTCTGGTCGGATTATGTACCAGAGACCTTACAGACTATGGCTTTCTGACATTGTTGTTGCCTCCTTCAACTCAACTTTCCTCATCAACGTCTACCGCGAGAAAGACTGGAACGCTGGTGAGGGGTTAGCTTTTCTTATAGCTTCGGATATTCATGTACCTGAACAGAGTCAAGGGCAGTGGCTAGGCCTCACGAATTCCAGCACCGATGGTAAAGCCACAAACCACTTCGTTGCTGTTGAATTCGACACGGAGAAGCAAGATTTCGATCCTGATGGCAACCACATTGGACTCAACATCAACTCTGTAAAATCGAACAAGACTGTTTCTCTCAAGCCTTTGGGCATTGAGATATCGCCAGAGACACCCACCAACTACAGTGTTTGGGTGGATTACAATGGTAGGTCCAAAGTCCTCGAAGTCTACATGGCTAAAGACTCTCTAACCAACCCGGCAACCAAGCCTCTGACACCACTTCTAAGGGAGACAATAAATTTGAGGGAGTATCTCAAAAAGGAGTCCTACTTCGGATTTGCTGGTTCCACGGGCACCTCAGTAGTTCAGCTAAACTGCGTTTTGAAATGGGATCTGAAGGTGGAGGAATTTCACCCTAGAAAAGATTTGACTTGGTTGAAAATTGCTGTCGGGGTTGGTGTCCCAGTAACGAGTTTGCTACTAGTCTCTGCAGTTTGGCTGGGAGTCGGATATTCAAACAAAAGGAAAAGAACCAGGATTGAGGAGTCCAGTGTTCTCGGGAAACTAAAGAGGTTGCCAGGGATGCCTAGGGAGTTCAAGTACAAGGAGATCAAGGAGGCTACCAATAATTTCCATGAGAGCATGAGACTGGGGCAAGGCGGATTTGGCATTGTTTACAGAGGATCTCTGCGTGATAAAGATCATGCAAATACCAACTCCTCAGCAGAAATTGCTGTCAAGAAATTCTCTCGGGACAACATCAAAGGTAAAGGCGATTTCATGGCTGAGCTCACCATAATTCACCGCCTTCGCCACAAACATCTTGTCCGATTAGTGGGATGGTGCTATGAGAAAGGGAAACTTCTTTTAGTCTACGATTTCATGCCAAATGGCAGTGTTGATAAACACCTCTACGAAGCTTCCAGCCAGAATACACTGAATTGGAAACACCGATGCAAGATCCTAGCTGGTGTGGCATCAGCATTGCATTACCTGCAAAATGAGTACGACCAAAAAGTGGTGCACCGTGACCTCAAGGCCAGCAACATCATGCTTGACTTAGACTTCAATGCCCGCCTGGGAGACTTTGGCCTTGCCCGAGCCTTGGATCAAGAGAGGAACTCATATGCTGAACTAGAACTAGCAGGAGTCCCGGGCACCATGGGCTATGTTGCTCCAGAGTGCTTCCACACAGGGAAGGCTACTCCAGAATCTGATGTGTTCGGTTTTGGGGCAGTGGTGCTTGAAATTGTATGTGGTAGAAGTCCTGGGATTAAGATTCTTCATGAACACCAGCAGTATTCGCTGGTCGATTGGGTGTGGATGTTGCATCGAGAAGGGTGTATTGAAGAAGCAGTAGATGAGCGGCTCAAAAACGATTATGTGTTTGATGAAGCAATTAAGCTTCTACTTCTCGGGTTGGCATGTTCACATCCGATTGCCAGTGAGAGGCCTCAAACACAGGCGGTTTGCCAGATCATATCTGGAACCATGCCGGCCCCTAGTGTACCTCCATTCAAGCCCGCTTTCACGTGGTCTTCCATGGCTACTGCCTACAGCAGCACTGAGACCGTGAGTACACTTTCTAACATCATTCTTTCTAGCATTACAGTGTCTTCCTCAATCACGGAAGAACATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase Pkinase_Tyr

Protein Analysis

692

Amino Acids

77.33

Weight (kDa)

7.08

Isoelectric Point (pI)

37.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 37 - 290 2.3e-65 Legume lectin domain
Pkinase PF00069 356 - 635 3.1e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 360 - 572 6.9e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000688)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09820 FvH4_2g17160 FvH4_2g17160
malus_domestica MD02G1107100.v1.1 MD02G1107300.v1.1 MD05G1144900.v1.1 MD10G1144700.v1.1 MD15G1226500.v1.1
prunus_persica Prupe.7G188700_v2.0.a1 Prupe.7G188700_v2.0.a1 Prupe.7G188700_v2.0.a1 Prupe.8G183000_v2.0.a1
pyrus_communis pycom05g14000 pycom10g12440 pycom15g20140
rosa_chinensis RchiOBHm_Chr2g0096621 RchiOBHm_Chr6g0281601 RchiOBHm_Chr6g0281651 RchiOBHm_Chr7g0212121
rosa_laevigata RLG00000002926 RLG00000002927 RLG00000002933 RLG00000008638 RLG00000012954 RLG00000012955 RLG00000016656
rosa_multiflora Rmu_co8091766.1_g000001 Rmu_co8287847.1_g000001 Rmu_co8297221.1_g000001 Rmu_co8485327.1_g000001 Rmu_co8512767.1_g000001 Rmu_sc0002316.1_g000041 Rmu_sc0003565.1_g000009 Rmu_sc0014556.1_g000004 Rmu_sc0027573.1_g000001 Rmu_sc0030028.1_g000001
rosa_roxburghii Rroxscaffold_1G00026540 Rroxscaffold_2G00145470 Rroxscaffold_3G00247100 Rroxscaffold_3G00247110 Rroxscaffold_3G00247120 Rroxscaffold_5G00362680 Rroxscaffold_5G00362710 Rroxscaffold_7G00186950
rosa_rugosa Rorug02G0059000 Rorug02G0059100 Rorug06G0142300 Rorug07G0131000 Rorug07G0131100
rosa_samantha Rh1DG155700 Rh2AG106500 Rh2AG171500 Rh2BG108800 Rh2BG178900 Rh2CG110600 Rh2CG176400 Rh2DG110100 Rh2DG177600 Rh4BG120600 Rh6BG258300 Rh6CG257100 Rh6DG249200 Rh6DG249300 Rh7AG264100 Rh7AG264200 Rh7BG257800 Rh7BG257900 Rh7BG258000 Rh7BG258100 Rh7CG280600 Rh7CG280700 Rh7DG270600
rosa_wichuraiana Rw2G008240 Rw6G022110 Rw7G022540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1437
AccB1I GGYRCC 3 cut(s) 77, 788, 1592
AccB7I CCANNNNNTGG 1 cut(s) 1453
AccBSI CCGCTC 1 cut(s) 1801
AccI GTMKAC 3 cut(s) 333, 663, 1308
AccII CGCG 1 cut(s) 339
AclWI GGATC 5 cut(s) 503, 834, 1126, 1390, 1551
AcsI RAATTY 5 cut(s) 436, 482, 733, 842, 1178
AcuI CTGAAG 2 cut(s) 179, 851
AcvI CACGTG 1 cut(s) 1968
AfaI GTAC 6 cut(s) 260, 399, 1037, 1442, 1944, 2014
AfiI CCNNNNNNNGG 4 cut(s) 1270, 1453, 1540, 1884
AhlI ACTAGT 1 cut(s) 916
AjnI CCWGG 4 cut(s) 968, 1012, 1512, 1702
AluBI AGCT 8 cut(s) 98, 371, 383, 805, 1225, 1355, 1403, 1840
AluI AGCT 8 cut(s) 98, 371, 383, 805, 1225, 1355, 1403, 1840
Alw21I GWGCWC 3 cut(s) 11, 1227, 1461
Alw26I GTCTC 7 cut(s) 259, 596, 719, 925, 1075, 1512, 1997
Alw44I GTGCAC 1 cut(s) 1457
AlwI GGATC 5 cut(s) 503, 834, 1126, 1390, 1551
AlwNI CAGNNNCTG 1 cut(s) 1649
Ama87I CYCGRG 5 cut(s) 992, 1185, 1533, 1588, 1850
AoxI GGCC 5 cut(s) 427, 1473, 1525, 1886, 1932
ApaLI GTGCAC 1 cut(s) 1457
ApeKI GCWGC 5 cut(s) 58, 68, 83, 86, 1995
ApoI RAATTY 5 cut(s) 436, 482, 733, 842, 1178
ArsI GACNNNNNNTTYG 4 cut(s) 718, 750, 1245, 1277
Asp700I GAANNNNTTC 1 cut(s) 110
AspA2I CCTAGG 1 cut(s) 1022
AspLEI GCGC 1 cut(s) 193
AspS9I GGNCC 2 cut(s) 645, 1933
AsuC2I CCSGG 3 cut(s) 692, 1589, 1590
AsuHPI GGTGA 5 cut(s) 19, 371, 839, 1219, 1229
AvaI CYCGRG 5 cut(s) 992, 1185, 1533, 1588, 1850
AvaII GGWCC 1 cut(s) 645
AvrII CCTAGG 1 cut(s) 1022
BaeGI GKGCMC 3 cut(s) 791, 1461, 1595
BanI GGYRCC 3 cut(s) 77, 788, 1592
BanII GRGCYC 1 cut(s) 1227
BbrPI CACGTG 1 cut(s) 1968
BbsI GAAGAC 2 cut(s) 1965, 2043
Bbv12I GWGCWC 3 cut(s) 11, 1227, 1461
BbvCI CCTCAGC 1 cut(s) 1156
BbvI GCAGC 5 cut(s) 45, 55, 95, 98, 2007
BccI CCATC 3 cut(s) 443, 509, 1269
BciT130I CCWGG 4 cut(s) 970, 1014, 1514, 1704
BcnI CCSGG 3 cut(s) 692, 1589, 1590
BcoDI GTCTC 7 cut(s) 259, 596, 719, 925, 1075, 1512, 1997
BcuI ACTAGT 1 cut(s) 916
BfmI CTRYAG 3 cut(s) 616, 924, 1990
BfoI RGCGCY 1 cut(s) 194
BfuAI ACCTGC 1 cut(s) 1437
BisI GCNGC 7 cut(s) 59, 69, 81, 84, 87, 1802, 1996
BlnI CCTAGG 1 cut(s) 1022
BlpI GCTNAGC 2 cut(s) 99, 1221
BlsI GCNGC 7 cut(s) 60, 70, 82, 85, 88, 1803, 1997
Bme1390I CCNGG 7 cut(s) 692, 970, 1014, 1514, 1589, 1590, 1704
Bme18I GGWCC 1 cut(s) 645
BmeT110I CYCGRG 5 cut(s) 992, 1185, 1533, 1588, 1850
BmgT120I GGNCC 2 cut(s) 645, 1933
BmiI GGNNCC 6 cut(s) 79, 781, 790, 1594, 1924, 1935
BmrFI CCNGG 7 cut(s) 692, 970, 1014, 1514, 1589, 1590, 1704
BmrI ACTGGG 2 cut(s) 893, 1094
BmsI GCATC 4 cut(s) 1008, 1379, 1421, 1774
BmuI ACTGGG 2 cut(s) 893, 1094
BpiI GAAGAC 2 cut(s) 1965, 2043
BplI GAGNNNNNCTC 2 cut(s) 1541, 1573
BpmI CTGGAG 2 cut(s) 1596, 1626
Bpu10I CCTNAGC 1 cut(s) 1156
Bpu1102I GCTNAGC 2 cut(s) 99, 1221
BpuEI CTTGAG 2 cut(s) 557, 1454
BpuMI CCSGG 3 cut(s) 692, 1589, 1590
BsaAI YACGTR 1 cut(s) 1968
BsaBI GATNNNNATC 2 cut(s) 507, 1134
BsaI GGTCTC 2 cut(s) 259, 1997
BsaJI CCNNGG 9 cut(s) 783, 1013, 1022, 1513, 1539, 1588, 1596, 1703, 1977
BsaXI ACNNNNNCTCC 2 cut(s) 1019, 1049
Bsc4I CCNNNNNNNGG 4 cut(s) 1270, 1453, 1540, 1884
Bse118I RCCGGY 1 cut(s) 1930
Bse1I ACTGG 5 cut(s) 353, 899, 984, 1089, 1878
Bse3DI GCAATG 1 cut(s) 1418
Bse8I GATNNNNATC 2 cut(s) 507, 1134
BseBI CCWGG 4 cut(s) 970, 1014, 1514, 1704
BseDI CCNNGG 9 cut(s) 783, 1013, 1022, 1513, 1539, 1588, 1596, 1703, 1977
BseGI GGATG 4 cut(s) 1023, 1280, 1764, 1867
BseJI GATNNNNATC 2 cut(s) 507, 1134
BseLI CCNNNNNNNGG 4 cut(s) 1270, 1453, 1540, 1884
BseMI GCAATG 1 cut(s) 1418
BseMII CTCAG 4 cut(s) 807, 1170, 1212, 1992
BseNI ACTGG 5 cut(s) 353, 899, 984, 1089, 1878
BseRI GAGGAG 2 cut(s) 992, 1144
BseSI GKGCMC 3 cut(s) 791, 1461, 1595
BseXI GCAGC 5 cut(s) 45, 55, 95, 98, 2007
BseYI CCCAGC 1 cut(s) 934
Bsh1236I CGCG 1 cut(s) 339
BshFI GGCC 5 cut(s) 429, 1475, 1527, 1888, 1934
BshNI GGYRCC 3 cut(s) 77, 788, 1592
BsiHKAI GWGCWC 3 cut(s) 11, 1227, 1461
BsiHKCI CYCGRG 5 cut(s) 992, 1185, 1533, 1588, 1850
BsiSI CCGG 3 cut(s) 692, 1589, 1931
BslFI GGGAC 3 cut(s) 881, 1202, 1571
BslI CCNNNNNNNGG 4 cut(s) 1270, 1453, 1540, 1884
BsmAI GTCTC 7 cut(s) 259, 596, 719, 925, 1075, 1512, 1997
BsmFI GGGAC 3 cut(s) 881, 1202, 1571
BsnI GGCC 5 cut(s) 429, 1475, 1527, 1888, 1934
Bso31I GGTCTC 2 cut(s) 259, 1997
BsoBI CYCGRG 5 cut(s) 992, 1185, 1533, 1588, 1850
Bsp1286I GDGCHC 5 cut(s) 11, 791, 1227, 1461, 1595
Bsp143I GATC 8 cut(s) 508, 826, 1044, 1118, 1135, 1395, 1543, 1911
Bsp1720I GCTNAGC 2 cut(s) 99, 1221
Bsp19I CCATGG 2 cut(s) 1596, 1977
BspANI GGCC 5 cut(s) 429, 1475, 1527, 1888, 1934
BspCNI CTCAG 4 cut(s) 806, 1169, 1213, 1993
BspFNI CGCG 1 cut(s) 339
BspHI TCATGA 1 cut(s) 1720
BspLI GGNNCC 6 cut(s) 79, 781, 790, 1594, 1924, 1935
BspMAI CTGCAG 1 cut(s) 928
BspMI ACCTGC 1 cut(s) 1437
BspPI GGATC 5 cut(s) 503, 834, 1126, 1390, 1551
BspT107I GGYRCC 3 cut(s) 77, 788, 1592
BspTNI GGTCTC 2 cut(s) 259, 1997
BsrBI CCGCTC 1 cut(s) 1801
BsrDI GCAATG 1 cut(s) 1418
BsrFI RCCGGY 1 cut(s) 1930
BsrI ACTGG 5 cut(s) 353, 899, 984, 1089, 1878
BssAI RCCGGY 1 cut(s) 1930
BssECI CCNNGG 9 cut(s) 783, 1013, 1022, 1513, 1539, 1588, 1596, 1703, 1977
BssMI GATC 8 cut(s) 508, 826, 1044, 1118, 1135, 1395, 1543, 1911
BssT1I CCWWGG 4 cut(s) 1022, 1539, 1596, 1977
Bst2UI CCWGG 4 cut(s) 970, 1014, 1514, 1704
Bst4CI ACNGT 6 cut(s) 212, 565, 620, 1463, 2008, 2047
BstAPI GCANNNNNTGC 2 cut(s) 1166, 1429
BstBAI YACGTR 1 cut(s) 1968
BstC8I GCNNGC 4 cut(s) 1477, 1510, 1932, 1959
BstDEI CTNAG 7 cut(s) 99, 719, 793, 1156, 1221, 1495, 2001
BstDSI CCRYGG 3 cut(s) 783, 1596, 1977
BstF5I GGATG 4 cut(s) 1023, 1280, 1764, 1867
BstFNI CGCG 1 cut(s) 339
BstH2I RGCGCY 1 cut(s) 194
BstHHI GCGC 1 cut(s) 193
BstKTI GATC 8 cut(s) 511, 829, 1047, 1121, 1138, 1398, 1546, 1914
BstMAI GTCTC 7 cut(s) 259, 596, 719, 925, 1075, 1512, 1997
BstMBI GATC 8 cut(s) 508, 826, 1044, 1118, 1135, 1395, 1543, 1911
BstNI CCWGG 4 cut(s) 970, 1014, 1514, 1704
BstNSI RCATGY 1 cut(s) 1863
BstSCI CCNGG 7 cut(s) 690, 968, 1012, 1512, 1587, 1588, 1702
BstSFI CTRYAG 3 cut(s) 616, 924, 1990
BstSLI GKGCMC 3 cut(s) 791, 1461, 1595
BstUI CGCG 1 cut(s) 339
BstV1I GCAGC 5 cut(s) 45, 55, 95, 98, 2007
BstV2I GAAGAC 2 cut(s) 1965, 2043
BstX2I RGATCY 3 cut(s) 826, 1118, 1395
BstYI RGATCY 3 cut(s) 826, 1118, 1395
BsuRI GGCC 5 cut(s) 429, 1475, 1527, 1888, 1934
BtgI CCRYGG 3 cut(s) 783, 1596, 1977
BtsCI GGATG 4 cut(s) 1023, 1280, 1764, 1867
BtsI GCAGTG 3 cut(s) 425, 1336, 1677
BveI ACCTGC 1 cut(s) 1437
Cac8I GCNNGC 4 cut(s) 1477, 1510, 1932, 1959
CaiI CAGNNNCTG 1 cut(s) 1649
CciI TCATGA 1 cut(s) 1720
CfoI GCGC 1 cut(s) 193
Cfr10I RCCGGY 1 cut(s) 1930
Cfr13I GGNCC 2 cut(s) 645, 1933
Cfr9I CCCGGG 1 cut(s) 1588
Csp6I GTAC 6 cut(s) 259, 398, 1036, 1441, 1943, 2013
CspCI CAANNNNNGTGG 2 cut(s) 401, 436
CviQI GTAC 6 cut(s) 259, 398, 1036, 1441, 1943, 2013
DdeI CTNAG 7 cut(s) 99, 719, 793, 1156, 1221, 1495, 2001
DpnI GATC 8 cut(s) 510, 828, 1046, 1120, 1137, 1397, 1545, 1913
DpnII GATC 8 cut(s) 508, 826, 1044, 1118, 1135, 1395, 1543, 1911
EciI GGCGGA 1 cut(s) 1110
Ecl136II GAGCTC 1 cut(s) 1225
Eco130I CCWWGG 4 cut(s) 1022, 1539, 1596, 1977
Eco147I AGGCCT 2 cut(s) 429, 1888
Eco24I GRGCYC 1 cut(s) 1227
Eco31I GGTCTC 2 cut(s) 259, 1997
Eco32I GATATC 1 cut(s) 594
Eco47I GGWCC 1 cut(s) 645
Eco53kI GAGCTC 1 cut(s) 1225
Eco57I CTGAAG 2 cut(s) 179, 851
Eco72I CACGTG 1 cut(s) 1968
Eco88I CYCGRG 5 cut(s) 992, 1185, 1533, 1588, 1850
EcoICRI GAGCTC 1 cut(s) 1225
EcoRI GAATTC 2 cut(s) 436, 482
EcoRII CCWGG 4 cut(s) 968, 1012, 1512, 1702
EcoRV GATATC 1 cut(s) 594
EcoT14I CCWWGG 4 cut(s) 1022, 1539, 1596, 1977
EcoT38I GRGCYC 1 cut(s) 1227
ErhI CCWWGG 4 cut(s) 1022, 1539, 1596, 1977
FalI AAGNNNNNCTT 4 cut(s) 177, 209, 1281, 1313
FaqI GGGAC 3 cut(s) 881, 1202, 1571
FauI CCCGC 3 cut(s) 228, 1517, 1966
FauNDI CATATG 1 cut(s) 1561
FblI GTMKAC 3 cut(s) 333, 663, 1308
Fnu4HI GCNGC 7 cut(s) 59, 69, 81, 84, 87, 1802, 1996
FokI GGATG 4 cut(s) 1030, 1287, 1771, 1854
FriOI GRGCYC 1 cut(s) 1227
Fsp4HI GCNGC 7 cut(s) 59, 69, 81, 84, 87, 1802, 1996
GlaI GCGC 1 cut(s) 192
GluI GCNGC 7 cut(s) 59, 69, 81, 84, 87, 1802, 1996
GsaI CCCAGC 1 cut(s) 938
GsuI CTGGAG 2 cut(s) 1596, 1626
HaeII RGCGCY 1 cut(s) 194
HaeIII GGCC 5 cut(s) 429, 1475, 1527, 1888, 1934
HapII CCGG 3 cut(s) 692, 1589, 1931
HhaI GCGC 1 cut(s) 193
Hin6I GCGC 1 cut(s) 191
HinP1I GCGC 1 cut(s) 191
HincII GTYRAC 1 cut(s) 201
HindII GTYRAC 1 cut(s) 201
HindIII AAGCTT 2 cut(s) 1353, 1838
HpaI GTTAAC 1 cut(s) 201
HpaII CCGG 3 cut(s) 692, 1589, 1931
HphI GGTGA 5 cut(s) 19, 371, 839, 1219, 1229
Hpy166II GTNNAC 9 cut(s) 201, 334, 664, 1111, 1309, 1459, 1865, 1943, 2015
Hpy8I GTNNAC 9 cut(s) 201, 334, 664, 1111, 1309, 1459, 1865, 1943, 2015
HpyAV CCTTC 8 cut(s) 40, 86, 163, 316, 826, 1253, 1627, 1766
HpyCH4III ACNGT 6 cut(s) 212, 565, 620, 1463, 2008, 2047
HpyCH4IV ACGT 2 cut(s) 330, 1967
HpyCH4V TGCA 8 cut(s) 61, 926, 1142, 1392, 1423, 1432, 1459, 1765
HpyF3I CTNAG 7 cut(s) 99, 719, 793, 1156, 1221, 1495, 2001
HpySE526I ACGT 2 cut(s) 330, 1967
HspAI GCGC 1 cut(s) 191
KroI GCCGGC 1 cut(s) 1930
KroNI GCCGGC 1 cut(s) 1932
KspAI GTTAAC 1 cut(s) 201
Kzo9I GATC 8 cut(s) 508, 826, 1044, 1118, 1135, 1395, 1543, 1911
LmnI GCTCC 2 cut(s) 95, 1615
Lsp1109I GCAGC 5 cut(s) 45, 55, 95, 98, 2007
LweI GCATC 4 cut(s) 1008, 1379, 1421, 1774
MaeII ACGT 2 cut(s) 330, 1967
MaeIII GTNAC 2 cut(s) 901, 1463
MalI GATC 8 cut(s) 510, 828, 1046, 1120, 1137, 1397, 1545, 1913
MbiI CCGCTC 1 cut(s) 1801
MboI GATC 8 cut(s) 508, 826, 1044, 1118, 1135, 1395, 1543, 1911
MboII GAAGA 5 cut(s) 165, 1709, 1796, 1965, 2043
MflI RGATCY 3 cut(s) 826, 1118, 1395
MhlI GDGCHC 5 cut(s) 11, 791, 1227, 1461, 1595
MlyI GAGTC 8 cut(s) 221, 418, 525, 671, 767, 948, 989, 1593
MmeI TCCRAC 2 cut(s) 230, 922
MroNI GCCGGC 1 cut(s) 1930
MroXI GAANNNNTTC 1 cut(s) 110
MseI TTAA 4 cut(s) 23, 200, 1710, 1836
MslI CAYNNNNRTG 1 cut(s) 2045
MspA1I CMGCKG 1 cut(s) 89
MspI CCGG 3 cut(s) 692, 1589, 1931
MspR9I CCNGG 7 cut(s) 692, 970, 1014, 1514, 1589, 1590, 1704
MvaI CCWGG 4 cut(s) 970, 1014, 1514, 1704
MvnI CGCG 1 cut(s) 339
NaeI GCCGGC 1 cut(s) 1932
NciI CCSGG 3 cut(s) 692, 1589, 1590
NcoI CCATGG 2 cut(s) 1596, 1977
NdeI CATATG 1 cut(s) 1561
NdeII GATC 8 cut(s) 508, 826, 1044, 1118, 1135, 1395, 1543, 1911
NgoMIV GCCGGC 1 cut(s) 1930
NlaIV GGNNCC 6 cut(s) 79, 781, 790, 1594, 1924, 1935
NmuCI GTSAC 1 cut(s) 1463
NspI RCATGY 1 cut(s) 1863
PagI TCATGA 1 cut(s) 1720
PceI AGGCCT 2 cut(s) 429, 1888
PcsI WCGNNNNNNNCGW 1 cut(s) 336
PdiI GCCGGC 1 cut(s) 1932
PdmI GAANNNNTTC 1 cut(s) 110
PfeI GAWTC 2 cut(s) 1646, 1714
PflMI CCANNNNNTGG 1 cut(s) 1453
PkrI GCNGC 7 cut(s) 60, 70, 82, 85, 88, 1803, 1997
PleI GAGTC 8 cut(s) 221, 417, 525, 671, 766, 947, 988, 1592
PmaCI CACGTG 1 cut(s) 1968
PmlI CACGTG 1 cut(s) 1968
PpsI GAGTC 8 cut(s) 221, 417, 525, 671, 766, 947, 988, 1592
Ppu21I YACGTR 1 cut(s) 1968
Psp124BI GAGCTC 1 cut(s) 1227
Psp6I CCWGG 4 cut(s) 968, 1012, 1512, 1702
PspCI CACGTG 1 cut(s) 1968
PspFI CCCAGC 1 cut(s) 934
PspGI CCWGG 4 cut(s) 968, 1012, 1512, 1702
PspN4I GGNNCC 6 cut(s) 79, 781, 790, 1594, 1924, 1935
PspPI GGNCC 2 cut(s) 645, 1933
PstI CTGCAG 1 cut(s) 928
PstNI CAGNNNCTG 1 cut(s) 1649
PsuI RGATCY 3 cut(s) 826, 1118, 1395
RsaI GTAC 6 cut(s) 260, 399, 1037, 1442, 1944, 2014
RsaNI GTAC 6 cut(s) 259, 398, 1036, 1441, 1943, 2013
RseI CAYNNNNRTG 1 cut(s) 2045
SacI GAGCTC 1 cut(s) 1227
SaqAI TTAA 4 cut(s) 23, 200, 1710, 1836
SatI GCNGC 7 cut(s) 59, 69, 81, 84, 87, 1802, 1996
Sau3AI GATC 8 cut(s) 508, 826, 1044, 1118, 1135, 1395, 1543, 1911
Sau96I GGNCC 2 cut(s) 645, 1933
SchI GAGTC 8 cut(s) 221, 418, 525, 671, 767, 948, 989, 1593
ScrFI CCNGG 7 cut(s) 692, 970, 1014, 1514, 1589, 1590, 1704
SduI GDGCHC 5 cut(s) 11, 791, 1227, 1461, 1595
SfaNI GCATC 4 cut(s) 1008, 1379, 1421, 1774
SfcI CTRYAG 3 cut(s) 616, 924, 1990
SinI GGWCC 1 cut(s) 645
SmaI CCCGGG 1 cut(s) 1590
SmiMI CAYNNNNRTG 1 cut(s) 2045
SmlI CTYRAG 2 cut(s) 572, 1469
SmoI CTYRAG 2 cut(s) 572, 1469
SpeI ACTAGT 1 cut(s) 916
SseBI AGGCCT 2 cut(s) 429, 1888
SstI GAGCTC 1 cut(s) 1227
StuI AGGCCT 2 cut(s) 429, 1888
StyD4I CCNGG 7 cut(s) 690, 968, 1012, 1512, 1587, 1588, 1702
StyI CCWWGG 4 cut(s) 1022, 1539, 1596, 1977
TaaI ACNGT 6 cut(s) 212, 565, 620, 1463, 2008, 2047
TaiI ACGT 2 cut(s) 333, 1970
TaqI TCGA 7 cut(s) 11, 486, 507, 554, 657, 1746, 1768
TatI WGTACW 2 cut(s) 1035, 2012
TauI GCSGC 2 cut(s) 83, 1804
TfiI GAWTC 2 cut(s) 1646, 1714
Tru1I TTAA 4 cut(s) 23, 200, 1710, 1836
Tru9I TTAA 4 cut(s) 23, 200, 1710, 1836
TseFI GTSAC 1 cut(s) 1463
TseI GCWGC 5 cut(s) 58, 68, 83, 86, 1995
Tsp45I GTSAC 1 cut(s) 1463
TspDTI ATGAA 7 cut(s) 147, 383, 1204, 1306, 1709, 1737, 1842
TspGWI ACGGA 1 cut(s) 506
TspMI CCCGGG 1 cut(s) 1588
Van91I CCANNNNNTGG 1 cut(s) 1453
VneI GTGCAC 1 cut(s) 1457
VpaK11BI GGWCC 1 cut(s) 645
XapI RAATTY 5 cut(s) 436, 482, 733, 842, 1178
XceI RCATGY 1 cut(s) 1863
XcmI CCANNNNNNNNNTGG 1 cut(s) 1916
XmaI CCCGGG 1 cut(s) 1588
XmaJI CCTAGG 1 cut(s) 1022
XmiI GTMKAC 3 cut(s) 333, 663, 1308
XmnI GAANNNNTTC 1 cut(s) 110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.