Rh7BG257800

L-type lectin-domain containing receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0000688
Physical Location & Seq
Reverse (-)
23483394 .. 23486881
3488 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG257800.1

Sequence Viewer

Length: 2343 bp
ATGTGTTTGAACAAGCTGCGTTTTCAGGAAGTTCCCACACTGGTCTCGACTGCTGTACTTGTAATTATGGCCCTGGAGTTAATAGCAGGGTCAGTATTTGGAGTGTTGTATGATCGTGTTTCGCGAGCTGCGGACAGGAAATCAGAGTTCAGATACCTCCTCACTCATATGAAACGCACTCTAGAGTCTTTAACAGGACAGGCCAGGTTCATTCGAGAGATACGGGAGTTTAATAATGAATTGAGTCTCCCCAACCATGACATAGCTGATCTTGAAACACAAATGATCGAAGGCACACAACTCGTTGGCAGGATGTCCAGTTTTCGAATGTACAACTATTGCTGCATGGATGGTTGCCACGACAAACTTTATGAATTGAATAGGTCTCTTGATAGACTTTTAAACAATCTGCAGCTGCAGCAAGCAAGGGATGTGAAGGAGATCTTGAAATTGTCAAGGCAAAACCGTGATGATCTTGATGAAATGAAGGGTATGTTGAAGATGATACTGCAGCAGATCAATGATCCTGAAATGAAGGGTCTAGTGAAGAAGTTACTGGAGCAGAATGCGGGGGACTCGACCGAGAGGTCGACCTCGGCTTCTGCAAGTAATACAGAAAGAGAAGGGAGTGATGAAGCACAAGTGGAATCATTAGAAGGACTATTAGAAGCTGCATTTCAGGTTCTGTTTGATGTCGTTATAGAAGTGAAGGGCAAGTCGACTTTGATGCTTGGACCAATTATTGGACATCTCAAATCCACGCTAGACTGCTTAAAGCCATTGATTGAAGATATATCACAGCATAACAACAAGGCATTGGATCGCCCAAAGAAGGAACTAGAAACTTTTGGAATGCAAATGAAGAGAGGTGTAGAGCTGGTTCGCGAGTGCTCAGAGGTTCATAAATGGACCAGCAACGAAACATACAAATACGCCAGCCAACTTTTTGAATTGGATGAGTCTCTTCAAAGGCACTTATGTGTACTAATAGTGCAGGTAGCGAGAGATGTGAAGGAGACCTCGGTTGTGCTAAGGAGTGTACGAGAGGTGGTGGAGAAAATTGAAGGGATAAGTGGTGTGGCAAAAAAACAACAACTTGCATTGGATATGGTGGAGGTGAATGAATTAAGGGATGTGAGGGAGACGACATTGGTTTCAGCAAGGAATGTAGAGGCAGAGTTGACAGTAGTGGATGGCGATGTACCTGAACAGCCATCATTTACAGCTGGATTGGATGTTCCTTCGGAGGAATTGAGTATGTCTAGAAAGAAGAAAAACTCGAAGATGAAGCTTCTTAAGGATGGGTGTCAATGCTTGACCCGACGGTCATTCTACAAGAGGAAGAGGGCTAGGGCCAGGGGAAGGGACTCGAACAGGTTAGACGCTTTGAAGAGTCTTCCAGTGATGTTGAGGGAGTTCAGTTACAGGGAGCTAAAGAAAGCTACCAACAACTTTGACTTGAAGCACACTTTGGGTCAAGGTGGATCTGTGGTTTACAGAGGATTGCTGTCGAAGGAAAATCTTGAAGTGGCAGTGAAGAAGTGCTCCAGGCTAGAGATCAAGGGTAAAGAGGATTTCTTGGCTGACCTCACCATTATTTACCGGCTGCGCCACAAACATATTGTCCCATTGCTCGGTTGGTGTCGCCAAAAGAAGATGCTACTCATAGTCCACGAGTTCATGCCAAATGGCAGCTTAGACAACCACCTATTCTCCGGACCGGAAAATACAACCCTAGGATGGAACCAGAGGTACAAGATCATATCTGGAGTGGCTTCAGTCCTACATTACCTCCAGGAGTTCCGTTGCAAAGTAGTCCACAGAAATATCGCGGCCAGCCACATAATGCTCGATTCCCACTTCAACGCGCGCCTTGGCAACTTCGGCCTGAGAAGCGCAGAACCCGAAGGTGTGCCGGGCACAATGGGATACATTGCCCCCGAGTGCTTCCACACTGGAGAGATGACCTGCGAGTCCGACGTGTACGGCTTCGGGGCGGTGGTTCTAGGAGTTGTTTGCGGTCAACGACCGTACACCAAAATCGGAGGGTTTCAGTTTTTGGTTGATTGGGTGTGGTCGTTGCATAGAGAAGGACGTGTGCTTGAGGCCGTGGATGAGAGGCTTGGAAATGAGTATGATGTTGAAGAAGCGCAAAGACTTCTGCTTCTTGGGCTGGCCTGCTCTCATCCCATTGCTTACGAGAGGCCTAAGAGCCAGACCATAGTCCAGGTTGTTTCCGGGTCTATTCCAGCGCCCAAAGTCTCGCCTTTTAAACCGGCTTTCGTGTGGCCGCCCTTGCCAGAAGGATCGGCAGCATTGCCAATCGACACTGGTAACACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase Pkinase_Tyr

Protein Analysis

780

Amino Acids

88.17

Weight (kDa)

8.03

Isoelectric Point (pI)

40.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 30 - 161 1.1e-16 Arabidopsis broad-spectrum mildew resistance protein RPW8
RPW8 PF05659 221 - 349 2.6e-22 Arabidopsis broad-spectrum mildew resistance protein RPW8
Pkinase PF00069 486 - 680 2.2e-27 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 487 - 685 1.4e-33 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000688)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09820 FvH4_2g17160 FvH4_2g17160
malus_domestica MD02G1107100.v1.1 MD02G1107300.v1.1 MD05G1144900.v1.1 MD10G1144700.v1.1 MD15G1226500.v1.1
prunus_persica Prupe.7G188700_v2.0.a1 Prupe.7G188700_v2.0.a1 Prupe.7G188700_v2.0.a1 Prupe.8G183000_v2.0.a1
pyrus_communis pycom05g14000 pycom10g12440 pycom15g20140
rosa_chinensis RchiOBHm_Chr2g0096621 RchiOBHm_Chr6g0281601 RchiOBHm_Chr6g0281651 RchiOBHm_Chr7g0212121
rosa_laevigata RLG00000002926 RLG00000002927 RLG00000002933 RLG00000008638 RLG00000012954 RLG00000012955 RLG00000016656
rosa_multiflora Rmu_co8091766.1_g000001 Rmu_co8287847.1_g000001 Rmu_co8297221.1_g000001 Rmu_co8485327.1_g000001 Rmu_co8512767.1_g000001 Rmu_sc0002316.1_g000041 Rmu_sc0003565.1_g000009 Rmu_sc0014556.1_g000004 Rmu_sc0027573.1_g000001 Rmu_sc0030028.1_g000001
rosa_roxburghii Rroxscaffold_1G00026540 Rroxscaffold_2G00145470 Rroxscaffold_3G00247100 Rroxscaffold_3G00247110 Rroxscaffold_3G00247120 Rroxscaffold_5G00362680 Rroxscaffold_5G00362710 Rroxscaffold_7G00186950
rosa_rugosa Rorug02G0059000 Rorug02G0059100 Rorug06G0142300 Rorug07G0131000 Rorug07G0131100
rosa_samantha Rh1DG155700 Rh2AG106500 Rh2AG171500 Rh2BG108800 Rh2BG178900 Rh2CG110600 Rh2CG176400 Rh2DG110100 Rh2DG177600 Rh4BG120600 Rh6BG258300 Rh6CG257100 Rh6DG249200 Rh6DG249300 Rh7AG264100 Rh7AG264200 Rh7BG257800 Rh7BG257900 Rh7BG258000 Rh7BG258100 Rh7CG280600 Rh7CG280700 Rh7DG270600
rosa_wichuraiana Rw2G008240 Rw6G022110 Rw7G022540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 586, 1324, 1972
Acc36I ACCTGC 2 cut(s) 985, 1976
AccB7I CCANNNNNTGG 1 cut(s) 743
AccI GTMKAC 2 cut(s) 590, 719
AccII CGCG 5 cut(s) 124, 885, 1832, 1868, 1870
AccIII TCCGGA 1 cut(s) 1715
AciI CCGC 6 cut(s) 131, 569, 1832, 1997, 2019, 2291
AclWI GGATC 4 cut(s) 518, 828, 1492, 2314
AcoI YGGCCR 2 cut(s) 1833, 2288
AcuI CTGAAG 1 cut(s) 1761
AfaI GTAC 8 cut(s) 57, 332, 984, 1041, 1203, 1754, 1985, 2033
AfiI CCNNNNNNNGG 5 cut(s) 743, 832, 1362, 1634, 1740
AflII CTTAAG 1 cut(s) 1295
AflIII ACRYGT 2 cut(s) 1980, 2095
AjiI CACGTC 2 cut(s) 1981, 2096
AjnI CCWGG 6 cut(s) 72, 203, 1355, 1547, 1794, 2226
AjuI GAANNNNNNNTTGG 2 cut(s) 1454, 1486
AleI CACNNNNGTG 1 cut(s) 978
AloI GAACNNNNNNTCC 2 cut(s) 1221, 1253
Alw21I GWGCWC 2 cut(s) 893, 1547
Alw26I GTCTC 7 cut(s) 49, 251, 390, 966, 1010, 1136, 2266
AlwI GGATC 4 cut(s) 518, 828, 1492, 2314
AlwNI CAGNNNCTG 1 cut(s) 685
Ama87I CYCGRG 1 cut(s) 1940
Aor13HI TCCGGA 1 cut(s) 1715
AoxI GGCC 9 cut(s) 69, 201, 1353, 1833, 1885, 2106, 2175, 2204, 2288
ArsI GACNNNNNNTTYG 2 cut(s) 1608, 1640
AspA2I CCTAGG 1 cut(s) 1735
AspLEI GCGC 6 cut(s) 1611, 1870, 1872, 1898, 2152, 2254
AspS9I GGNCC 5 cut(s) 70, 734, 909, 1353, 1718
AsuC2I CCSGG 2 cut(s) 1917, 2239
AsuHPI GGTGA 2 cut(s) 1129, 1582
AsuII TTCGAA 1 cut(s) 325
AvaI CYCGRG 1 cut(s) 1940
AvaII GGWCC 3 cut(s) 734, 909, 1718
AvrII CCTAGG 1 cut(s) 1735
BaeGI GKGCMC 1 cut(s) 1922
BaeI ACNNNNGTAYC 2 cut(s) 212, 245
BauI CACGAG 1 cut(s) 1673
BbsI GAAGAC 1 cut(s) 1388
Bbv12I GWGCWC 2 cut(s) 893, 1547
BccI CCATC 5 cut(s) 344, 1187, 1222, 1295, 1734
BceAI ACGGC 2 cut(s) 2002, 2093
BcgI CGANNNNNNTGC 4 cut(s) 283, 317, 709, 743
BciT130I CCWGG 6 cut(s) 74, 205, 1357, 1549, 1796, 2228
BciVI GTATCC 1 cut(s) 1922
BcnI CCSGG 2 cut(s) 1917, 2239
BcoDI GTCTC 7 cut(s) 49, 251, 390, 966, 1010, 1136, 2266
BfaI CTAG 9 cut(s) 182, 542, 764, 839, 1263, 1350, 1553, 1736, 2006
BfmI CTRYAG 3 cut(s) 410, 416, 509
BfoI RGCGCY 1 cut(s) 2255
BfrI CTTAAG 1 cut(s) 1295
BfuAI ACCTGC 2 cut(s) 985, 1976
BfuI GTATCC 1 cut(s) 1922
BglII AGATCT 1 cut(s) 441
BlnI CCTAGG 1 cut(s) 1735
Bme1390I CCNGG 8 cut(s) 74, 205, 1357, 1549, 1796, 1917, 2228, 2239
Bme18I GGWCC 3 cut(s) 734, 909, 1718
BmeT110I CYCGRG 1 cut(s) 1940
BmgBI CACGTC 2 cut(s) 1981, 2096
BmgT120I GGNCC 5 cut(s) 70, 734, 909, 1353, 1718
BmiI GGNNCC 1 cut(s) 1745
BmrFI CCNGG 8 cut(s) 74, 205, 1357, 1549, 1796, 1917, 2228, 2239
BmsI GCATC 2 cut(s) 717, 1647
BoxI GACNNNNGTC 1 cut(s) 2222
BpiI GAAGAC 1 cut(s) 1388
BpmI CTGGAG 6 cut(s) 95, 578, 1531, 1778, 1788, 1977
Bpu10I CCTNAGC 1 cut(s) 1031
Bpu14I TTCGAA 1 cut(s) 325
BpuEI CTTGAG 1 cut(s) 2123
BpuMI CCSGG 2 cut(s) 1917, 2239
BsaI GGTCTC 3 cut(s) 49, 390, 1010
BsaJI CCNNGG 7 cut(s) 72, 594, 1020, 1356, 1735, 1873, 2109
BsaWI WCCGGW 2 cut(s) 1715, 1720
BsaXI ACNNNNNCTCC 4 cut(s) 1697, 1727, 1776, 1806
Bsc4I CCNNNNNNNGG 5 cut(s) 743, 832, 1362, 1634, 1740
Bse118I RCCGGY 2 cut(s) 1602, 2275
Bse1I ACTGG 6 cut(s) 45, 318, 561, 1400, 1960, 2335
Bse3DI GCAATG 4 cut(s) 1628, 1932, 2190, 2315
BseAI TCCGGA 1 cut(s) 1715
BseBI CCWGG 6 cut(s) 74, 205, 1357, 1549, 1796, 2228
BseDI CCNNGG 7 cut(s) 72, 594, 1020, 1356, 1735, 1873, 2109
BseLI CCNNNNNNNGG 5 cut(s) 743, 832, 1362, 1634, 1740
BseMI GCAATG 4 cut(s) 1628, 1932, 2190, 2315
BseMII CTCAG 2 cut(s) 906, 1880
BseNI ACTGG 6 cut(s) 45, 318, 561, 1400, 1960, 2335
BsePI GCGCGC 1 cut(s) 1868
BseRI GAGGAG 1 cut(s) 149
BseSI GKGCMC 1 cut(s) 1922
BsgI GTGCAG 1 cut(s) 1013
Bsh1236I CGCG 5 cut(s) 124, 885, 1832, 1868, 1870
Bsh1285I CGRYCG 2 cut(s) 582, 2030
BshFI GGCC 9 cut(s) 71, 203, 1355, 1835, 1887, 2108, 2177, 2206, 2290
BsiEI CGRYCG 2 cut(s) 582, 2030
BsiHKAI GWGCWC 2 cut(s) 893, 1547
BsiHKCI CYCGRG 1 cut(s) 1940
BsiSI CCGG 6 cut(s) 1603, 1716, 1721, 1916, 2238, 2276
BslFI GGGAC 3 cut(s) 587, 1379, 1610
BslI CCNNNNNNNGG 5 cut(s) 743, 832, 1362, 1634, 1740
BsmAI GTCTC 7 cut(s) 49, 251, 390, 966, 1010, 1136, 2266
BsmBI CGTCTC 1 cut(s) 1136
BsmFI GGGAC 3 cut(s) 587, 1379, 1610
BsmI GAATGC 2 cut(s) 571, 858
BsnI GGCC 9 cut(s) 71, 203, 1355, 1835, 1887, 2108, 2177, 2206, 2290
Bso31I GGTCTC 3 cut(s) 49, 390, 1010
BsoBI CYCGRG 1 cut(s) 1940
Bsp119I TTCGAA 1 cut(s) 325
Bsp1286I GDGCHC 3 cut(s) 893, 1547, 1922
Bsp13I TCCGGA 1 cut(s) 1715
Bsp1407I TGTACA 1 cut(s) 330
Bsp68I TCGCGA 2 cut(s) 124, 885
BspACI CCGC 6 cut(s) 131, 569, 1832, 1997, 2019, 2291
BspANI GGCC 9 cut(s) 71, 203, 1355, 1835, 1887, 2108, 2177, 2206, 2290
BspCNI CTCAG 2 cut(s) 905, 1881
BspEI TCCGGA 1 cut(s) 1715
BspFNI CGCG 5 cut(s) 124, 885, 1832, 1868, 1870
BspLI GGNNCC 1 cut(s) 1745
BspMAI CTGCAG 3 cut(s) 414, 420, 513
BspMI ACCTGC 2 cut(s) 985, 1976
BspPI GGATC 4 cut(s) 518, 828, 1492, 2314
BspT104I TTCGAA 1 cut(s) 325
BspTI CTTAAG 1 cut(s) 1295
BspTNI GGTCTC 3 cut(s) 49, 390, 1010
BsrDI GCAATG 4 cut(s) 1628, 1932, 2190, 2315
BsrFI RCCGGY 2 cut(s) 1602, 2275
BsrGI TGTACA 1 cut(s) 330
BsrI ACTGG 6 cut(s) 45, 318, 561, 1400, 1960, 2335
BssAI RCCGGY 2 cut(s) 1602, 2275
BssECI CCNNGG 7 cut(s) 72, 594, 1020, 1356, 1735, 1873, 2109
BssHII GCGCGC 1 cut(s) 1868
BssSI CACGAG 1 cut(s) 1673
BssT1I CCWWGG 2 cut(s) 1735, 1873
Bst2BI CACGAG 1 cut(s) 1673
Bst2UI CCWGG 6 cut(s) 74, 205, 1357, 1549, 1796, 2228
Bst4CI ACNGT 4 cut(s) 467, 1186, 1326, 2031
Bst6I CTCTTC 4 cut(s) 857, 969, 1337, 1385
BstAFI CTTAAG 1 cut(s) 1295
BstAUI TGTACA 1 cut(s) 330
BstBI TTCGAA 1 cut(s) 325
BstC8I GCNNGC 7 cut(s) 126, 423, 937, 1837, 1870, 2175, 2179
BstDEI CTNAG 5 cut(s) 892, 1031, 1696, 1889, 2208
BstDSI CCRYGG 1 cut(s) 2109
BstFNI CGCG 5 cut(s) 124, 885, 1832, 1868, 1870
BstH2I RGCGCY 1 cut(s) 2255
BstHHI GCGC 6 cut(s) 1611, 1870, 1872, 1898, 2152, 2254
BstMAI GTCTC 7 cut(s) 49, 251, 390, 966, 1010, 1136, 2266
BstMCI CGRYCG 2 cut(s) 582, 2030
BstMWI GCNNNNNNNGC 5 cut(s) 418, 1884, 1893, 2170, 2296
BstNI CCWGG 6 cut(s) 74, 205, 1357, 1549, 1796, 2228
BstPAI GACNNNNGTC 1 cut(s) 2222
BstSCI CCNGG 8 cut(s) 72, 203, 1355, 1547, 1794, 1915, 2226, 2237
BstSFI CTRYAG 3 cut(s) 410, 416, 509
BstSLI GKGCMC 1 cut(s) 1922
BstUI CGCG 5 cut(s) 124, 885, 1832, 1868, 1870
BstV2I GAAGAC 1 cut(s) 1388
BstX2I RGATCY 2 cut(s) 441, 1484
BstYI RGATCY 2 cut(s) 441, 1484
BsuI GTATCC 1 cut(s) 1922
BsuRI GGCC 9 cut(s) 71, 203, 1355, 1835, 1887, 2108, 2177, 2206, 2290
BtgI CCRYGG 1 cut(s) 2109
BtgZI GCGATG 1 cut(s) 1212
BtrI CACGTC 2 cut(s) 1981, 2096
BtsI GCAGTG 1 cut(s) 1539
BtsIMutI CAGTG 5 cut(s) 38, 1407, 1539, 1953, 2328
BtuMI TCGCGA 2 cut(s) 124, 885
BveI ACCTGC 2 cut(s) 985, 1976
Cac8I GCNNGC 7 cut(s) 126, 423, 937, 1837, 1870, 2175, 2179
CaiI CAGNNNCTG 1 cut(s) 685
CfoI GCGC 6 cut(s) 1611, 1870, 1872, 1898, 2152, 2254
Cfr10I RCCGGY 2 cut(s) 1602, 2275
Cfr13I GGNCC 5 cut(s) 70, 734, 909, 1353, 1718
CpoI CGGWCCG 1 cut(s) 1718
CseI GACGC 1 cut(s) 1391
Csp6I GTAC 8 cut(s) 56, 331, 983, 1040, 1202, 1753, 1984, 2032
CspI CGGWCCG 1 cut(s) 1718
CviAII CATG 3 cut(s) 257, 346, 1681
CviQI GTAC 8 cut(s) 56, 331, 983, 1040, 1202, 1753, 1984, 2032
DdeI CTNAG 5 cut(s) 892, 1031, 1696, 1889, 2208
DraI TTTAAA 2 cut(s) 402, 2272
DrdI GACNNNNNNGTC 3 cut(s) 586, 1324, 1972
DseDI GACNNNNNNGTC 3 cut(s) 586, 1324, 1972
EaeI YGGCCR 2 cut(s) 1833, 2288
Eam1104I CTCTTC 4 cut(s) 857, 969, 1337, 1385
EarI CTCTTC 4 cut(s) 857, 969, 1337, 1385
Eco130I CCWWGG 2 cut(s) 1735, 1873
Eco147I AGGCCT 1 cut(s) 2206
Eco31I GGTCTC 3 cut(s) 49, 390, 1010
Eco47I GGWCC 3 cut(s) 734, 909, 1718
Eco57I CTGAAG 1 cut(s) 1761
Eco88I CYCGRG 1 cut(s) 1940
EcoRII CCWGG 6 cut(s) 72, 203, 1355, 1547, 1794, 2226
EcoT14I CCWWGG 2 cut(s) 1735, 1873
ErhI CCWWGG 2 cut(s) 1735, 1873
Esp3I CGTCTC 1 cut(s) 1136
FaeI CATG 3 cut(s) 260, 349, 1684
FalI AAGNNNNNCTT 2 cut(s) 428, 460
FaqI GGGAC 3 cut(s) 587, 1379, 1610
FatI CATG 3 cut(s) 256, 345, 1680
FauI CCCGC 1 cut(s) 562
FauNDI CATATG 1 cut(s) 168
FblI GTMKAC 2 cut(s) 590, 719
FspBI CTAG 9 cut(s) 182, 542, 764, 839, 1263, 1350, 1553, 1736, 2006
GlaI GCGC 6 cut(s) 1610, 1869, 1871, 1897, 2151, 2253
GsuI CTGGAG 6 cut(s) 95, 578, 1531, 1778, 1788, 1977
HaeII RGCGCY 1 cut(s) 2255
HaeIII GGCC 9 cut(s) 71, 203, 1355, 1835, 1887, 2108, 2177, 2206, 2290
HapII CCGG 6 cut(s) 1603, 1716, 1721, 1916, 2238, 2276
HgaI GACGC 1 cut(s) 1391
HhaI GCGC 6 cut(s) 1611, 1870, 1872, 1898, 2152, 2254
Hin1II CATG 3 cut(s) 260, 349, 1684
Hin6I GCGC 6 cut(s) 1609, 1868, 1870, 1896, 2150, 2252
HinP1I GCGC 6 cut(s) 1609, 1868, 1870, 1896, 2150, 2252
HincII GTYRAC 4 cut(s) 591, 720, 1182, 2024
HindII GTYRAC 4 cut(s) 591, 720, 1182, 2024
HindIII AAGCTT 1 cut(s) 1289
HinfI GANTC 9 cut(s) 185, 244, 575, 647, 959, 1367, 1393, 1853, 1973
HpaII CCGG 6 cut(s) 1603, 1716, 1721, 1916, 2238, 2276
HphI GGTGA 2 cut(s) 1129, 1582
Hpy188I TCNGA 6 cut(s) 145, 152, 895, 1246, 1978, 2045
Hpy99I CGWCG 2 cut(s) 1326, 1982
HpyCH4III ACNGT 4 cut(s) 467, 1186, 1326, 2031
HpyCH4IV ACGT 2 cut(s) 1980, 2095
HpyF10VI GCNNNNNNNGC 5 cut(s) 418, 1884, 1893, 2170, 2296
HpyF3I CTNAG 5 cut(s) 892, 1031, 1696, 1889, 2208
HpySE526I ACGT 2 cut(s) 1980, 2095
Hsp92II CATG 3 cut(s) 260, 349, 1684
HspAI GCGC 6 cut(s) 1609, 1868, 1870, 1896, 2150, 2252
Kpn2I TCCGGA 1 cut(s) 1715
LmnI GCTCC 3 cut(s) 559, 1429, 1550
LweI GCATC 2 cut(s) 717, 1647
MaeI CTAG 9 cut(s) 182, 542, 764, 839, 1263, 1350, 1553, 1736, 2006
MaeII ACGT 2 cut(s) 1980, 2095
MaeIII GTNAC 3 cut(s) 552, 1421, 2333
MflI RGATCY 2 cut(s) 441, 1484
MhlI GDGCHC 3 cut(s) 893, 1547, 1922
MluCI AATT 9 cut(s) 63, 239, 374, 449, 738, 950, 1059, 1124, 1250
MlyI GAGTC 7 cut(s) 194, 253, 569, 968, 1361, 1402, 1982
MmeI TCCRAC 1 cut(s) 2001
MroI TCCGGA 1 cut(s) 1715
MseI TTAA 8 cut(s) 80, 191, 231, 401, 773, 1127, 1296, 2271
MslI CAYNNNNRTG 2 cut(s) 167, 978
MspA1I CMGCKG 2 cut(s) 415, 1226
MspCI CTTAAG 1 cut(s) 1295
MspI CCGG 6 cut(s) 1603, 1716, 1721, 1916, 2238, 2276
MspR9I CCNGG 8 cut(s) 74, 205, 1357, 1549, 1796, 1917, 2228, 2239
Mva1269I GAATGC 2 cut(s) 571, 858
MvaI CCWGG 6 cut(s) 74, 205, 1357, 1549, 1796, 2228
MvnI CGCG 5 cut(s) 124, 885, 1832, 1868, 1870
MwoI GCNNNNNNNGC 5 cut(s) 418, 1884, 1893, 2170, 2296
NciI CCSGG 2 cut(s) 1917, 2239
NdeI CATATG 1 cut(s) 168
NlaIII CATG 3 cut(s) 260, 349, 1684
NlaIV GGNNCC 1 cut(s) 1745
NmeAIII GCCGAG 1 cut(s) 575
NruI TCGCGA 2 cut(s) 124, 885
NspV TTCGAA 1 cut(s) 325
OliI CACNNNNGTG 1 cut(s) 978
PauI GCGCGC 1 cut(s) 1868
PceI AGGCCT 1 cut(s) 2206
PcsI WCGNNNNNNNCGW 1 cut(s) 121
PctI GAATGC 2 cut(s) 571, 858
PfeI GAWTC 2 cut(s) 647, 1853
PflMI CCANNNNNTGG 1 cut(s) 743
PfoI TCCNGGA 1 cut(s) 1794
PleI GAGTC 7 cut(s) 193, 252, 569, 967, 1361, 1401, 1981
PpsI GAGTC 7 cut(s) 193, 252, 569, 967, 1361, 1401, 1981
PshAI GACNNNNGTC 1 cut(s) 2222
Psp6I CCWGG 6 cut(s) 72, 203, 1355, 1547, 1794, 2226
PspGI CCWGG 6 cut(s) 72, 203, 1355, 1547, 1794, 2226
PspN4I GGNNCC 1 cut(s) 1745
PspPI GGNCC 5 cut(s) 70, 734, 909, 1353, 1718
PsrI GAACNNNNNNTAC 4 cut(s) 864, 896, 1736, 1768
PstI CTGCAG 3 cut(s) 414, 420, 513
PstNI CAGNNNCTG 1 cut(s) 685
PsuI RGATCY 2 cut(s) 441, 1484
PteI GCGCGC 1 cut(s) 1868
PvuII CAGCTG 2 cut(s) 415, 1226
RruI TCGCGA 2 cut(s) 124, 885
RsaI GTAC 8 cut(s) 57, 332, 984, 1041, 1203, 1754, 1985, 2033
RsaNI GTAC 8 cut(s) 56, 331, 983, 1040, 1202, 1753, 1984, 2032
RseI CAYNNNNRTG 2 cut(s) 167, 978
Rsr2I CGGWCCG 1 cut(s) 1718
RsrII CGGWCCG 1 cut(s) 1718
SalI GTCGAC 2 cut(s) 589, 718
SaqAI TTAA 8 cut(s) 80, 191, 231, 401, 773, 1127, 1296, 2271
Sau96I GGNCC 5 cut(s) 70, 734, 909, 1353, 1718
SchI GAGTC 7 cut(s) 194, 253, 569, 968, 1361, 1402, 1982
ScrFI CCNGG 8 cut(s) 74, 205, 1357, 1549, 1796, 1917, 2228, 2239
SduI GDGCHC 3 cut(s) 893, 1547, 1922
SfaNI GCATC 2 cut(s) 717, 1647
SfcI CTRYAG 3 cut(s) 410, 416, 509
SfuI TTCGAA 1 cut(s) 325
SinI GGWCC 3 cut(s) 734, 909, 1718
SmiMI CAYNNNNRTG 2 cut(s) 167, 978
SmlI CTYRAG 2 cut(s) 1295, 2102
SmoI CTYRAG 2 cut(s) 1295, 2102
Sse9I AATT 9 cut(s) 63, 239, 374, 449, 738, 950, 1059, 1124, 1250
SseBI AGGCCT 1 cut(s) 2206
SsiI CCGC 6 cut(s) 131, 569, 1832, 1997, 2019, 2291
SspMI CTAG 9 cut(s) 182, 542, 764, 839, 1263, 1350, 1553, 1736, 2006
StuI AGGCCT 1 cut(s) 2206
StyD4I CCNGG 8 cut(s) 72, 203, 1355, 1547, 1794, 1915, 2226, 2237
StyI CCWWGG 2 cut(s) 1735, 1873
TaaI ACNGT 4 cut(s) 467, 1186, 1326, 2031
TaiI ACGT 2 cut(s) 1983, 2098
TaqII GACCGA 1 cut(s) 596
TasI AATT 9 cut(s) 63, 239, 374, 449, 738, 950, 1059, 1124, 1250
TatI WGTACW 3 cut(s) 55, 330, 982
TauI GCSGC 2 cut(s) 1835, 2293
TfiI GAWTC 2 cut(s) 647, 1853
Tru1I TTAA 8 cut(s) 80, 191, 231, 401, 773, 1127, 1296, 2271
Tru9I TTAA 8 cut(s) 80, 191, 231, 401, 773, 1127, 1296, 2271
TscAI CASTG 5 cut(s) 45, 1407, 1539, 1960, 2335
TspGWI ACGGA 1 cut(s) 1793
TspRI CASTG 5 cut(s) 45, 1407, 1539, 1960, 2335
Van91I CCANNNNNTGG 1 cut(s) 743
Vha464I CTTAAG 1 cut(s) 1295
VpaK11BI GGWCC 3 cut(s) 734, 909, 1718
XbaI TCTAGA 2 cut(s) 181, 1262
XcmI CCANNNNNNNNNTGG 1 cut(s) 1635
XmaJI CCTAGG 1 cut(s) 1735
XmiI GTMKAC 2 cut(s) 590, 719
XspI CTAG 9 cut(s) 182, 542, 764, 839, 1263, 1350, 1553, 1736, 2006
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.