pycom05g14000

L-type lectin-domain containing receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0000688
Physical Location & Seq
Forward (+)
17519100 .. 17521292
2193 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g14000.1

Sequence Viewer

Length: 2088 bp
ATGAGGTGTTCGAAAAGAATGTTAATCACCTTCCTAGTTGCCTCTTTTGCCATAAAGCTGCATTATGCTGCCATAGGCGCCGCAGCAGCAGAAGGAGCCAAGCTGAAAGATTTCCCGTTTCTTAAATTTGATGAAAAAACTGACTCAACTGCCTTCCACTTTACCCAGCATTCTTCCATTGATCAGGGGGCGCTTCAGTTAACCCCAGACAGCGAGAACCCGCAAGACCCCAAAGAAAACAAGTCTGGTCGGATTATGTACAAGAGACCTTACAGACTATGGCTTTCTGACAACGACGATGCTGTTGTTGCCTCCTTCAACTCAACTTTCCTCATCAACATCTACCACAAGAAAGAGTGGGTCGCTGGTGAGGGGTTAGCTTTTCTTATAGCTTCGGATATTCAGGTACCTGAACAAAGTCAAGGGCAGTGGCTAGGCCTCACGAATTCCAGCACCGATGGTAAAGCCACAAACCACTTCGTTGCTGTTGAATTCGACACGGAGAAGCAAGATTTCGATCCTGATGGCAACCACATTGGACTCAACATCAACTCTGTAAAATCAAACAAGACTGTTTCTCTCAAGCCTTTGGGCATTGAGATATCGCCGGAGACACTCACCTACTACAACGTTTGGGTGGATTACAATGGTAGGTCCAAAGTCCTCGAAGTCTACATGGCTAATGAGTCTCTAACCAACCCAGCAGCCAAGCCTCTGACACCACTTCTAAGGGAGACAATAAACTTGAGGGAATATCTTAAAAAGGAGTCCTACTTCGGATTTGCTGGTTCCACGGGCACCTCAGCAATTCAGCTAAACTGCGTTTTGAAATGGGATCTGAAGGTGGAGGAATTTCACCCTAGAAAAGATTTGACTTGGTTGAAGATTGCTGTAGGGGTTGGTGTCCCAGTAACGAGTTTGCTACTAGTCTCTGCAGTTTGGCTGGGAGTCGGATATTCAAACAAAAGGAAAAGAACCAGGATTGAGGAGTCCAATGTTCTCGGGAAACTGAAGAGGTTGCCAGGGATGCCTAGGGAGTTCAAGTACAAGGAGCTCAAGGAGGCTACCAATAATTTCCATGAGAGCATGAGACTGGGGCAAGGCGGATTCGGCATTGTTTACAGAGATCGATCTCTGCATGATAAAGATCAAGCAAATACCAACACCTCTGTAGAAATTGCTGTCAAGAAATTCTCTCGGGACAACATCAAAGGCAAAGACGATTTCATGGCTGAGCTCACCATAATTCACCGCCTTCGCCACAAACATCTTGTCCGATTAGTAGGATGGTGCTATGAGAAAGGGAAACTTCTTTTAGTCTACGATTTCATGCCAAATGGCAGCGTCGATAAACACCTCTACGAAGCTTCCAGCCAGAATACACTGAATTGGAAACACCGATGCAAGATCCTAGCTGGTGTGGCATCAGCATTGCATTACCTGCAAAATGAGTACGACCAAAAAGTGGTGCACCGTGACCTCAAAGCCAGCAACATCATGCTTGACTCAGACTTCAATGCCCGCCTGGGAGACTTTGGCCTTGCCCGAGCCTTGGATCAAGAGAGAAACTCATATGCTGAACTAGAACTAGCTGGAGTCCCGGGCACCATGGGCTATGTTGCTCCAGAGTGCTTCCACACAGGGAAGGCTACTCCAGAATCTGATGTGTTCGGCTTTGGGGCAGTGGTGCTTGAAATTGTATGTGGTAGAAGTCCTGGGATTAAGATTCTTCATGAACACCAGCAGTATTCGCTGGTCGATTGGGTGTGGATGTTGCATCGAGAAGGGCGTATTGAAGAAGCAGTAGATGAGCTGCTCAGAAACGATTATGTGTTTGATGAAGCAATTAAGCTTCTACTTCTCGGGTTGGCATGTTCACATCCGATTGCCAGTGAGAGGCCTCAAACACAGGCGGTTTGCCAGATCATATCTGGAACCATGCCGGCCCCTAGTGTACCTCCATTCAAGCCCGCTTTCACGTGGTCTTCCATGGCTACTGCCTACAGCAGCACTGAGACCGCGTGTACACTTTCTAACATCATTCTTTCTAGCATTACAGTGTCTTCCTCAATCACGGAAGAACATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase Pkinase_Tyr

Protein Analysis

696

Amino Acids

77.93

Weight (kDa)

6.76

Isoelectric Point (pI)

40.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 37 - 293 1e-66 Legume lectin domain
Lectin_L-type_dom PF18483 52 - 268 2.7e-06 Legume lectin beta-barrel domain
Pkinase PF00069 359 - 627 2.1e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 363 - 586 2.5e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000688)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09820 FvH4_2g17160 FvH4_2g17160
malus_domestica MD02G1107100.v1.1 MD02G1107300.v1.1 MD05G1144900.v1.1 MD10G1144700.v1.1 MD15G1226500.v1.1
prunus_persica Prupe.7G188700_v2.0.a1 Prupe.7G188700_v2.0.a1 Prupe.7G188700_v2.0.a1 Prupe.8G183000_v2.0.a1
pyrus_communis pycom05g14000 pycom10g12440 pycom15g20140
rosa_chinensis RchiOBHm_Chr2g0096621 RchiOBHm_Chr6g0281601 RchiOBHm_Chr6g0281651 RchiOBHm_Chr7g0212121
rosa_laevigata RLG00000002926 RLG00000002927 RLG00000002933 RLG00000008638 RLG00000012954 RLG00000012955 RLG00000016656
rosa_multiflora Rmu_co8091766.1_g000001 Rmu_co8287847.1_g000001 Rmu_co8297221.1_g000001 Rmu_co8485327.1_g000001 Rmu_co8512767.1_g000001 Rmu_sc0002316.1_g000041 Rmu_sc0003565.1_g000009 Rmu_sc0014556.1_g000004 Rmu_sc0027573.1_g000001 Rmu_sc0030028.1_g000001
rosa_roxburghii Rroxscaffold_1G00026540 Rroxscaffold_2G00145470 Rroxscaffold_3G00247100 Rroxscaffold_3G00247110 Rroxscaffold_3G00247120 Rroxscaffold_5G00362680 Rroxscaffold_5G00362710 Rroxscaffold_7G00186950
rosa_rugosa Rorug02G0059000 Rorug02G0059100 Rorug06G0142300 Rorug07G0131000 Rorug07G0131100
rosa_samantha Rh1DG155700 Rh2AG106500 Rh2AG171500 Rh2BG108800 Rh2BG178900 Rh2CG110600 Rh2CG176400 Rh2DG110100 Rh2DG177600 Rh4BG120600 Rh6BG258300 Rh6CG257100 Rh6DG249200 Rh6DG249300 Rh7AG264100 Rh7AG264200 Rh7BG257800 Rh7BG257900 Rh7BG258000 Rh7BG258100 Rh7CG280600 Rh7CG280700 Rh7DG270600
rosa_wichuraiana Rw2G008240 Rw6G022110 Rw7G022540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1449
Acc65I GGTACC 1 cut(s) 406
AccB1I GGYRCC 4 cut(s) 77, 406, 797, 1604
AccB7I CCANNNNNTGG 1 cut(s) 1465
AccI GTMKAC 2 cut(s) 672, 1320
AccII CGCG 1 cut(s) 2021
AciI CCGC 8 cut(s) 81, 221, 1104, 1252, 1522, 1913, 1971, 2019
AclI AACGTT 1 cut(s) 630
AclWI GGATC 4 cut(s) 512, 843, 1402, 1563
AcsI RAATTY 5 cut(s) 125, 445, 491, 851, 1190
AcuI CTGAAG 3 cut(s) 179, 860, 1031
AcvI CACGTG 1 cut(s) 1980
AcyI GRCGYC 1 cut(s) 78
AfaI GTAC 6 cut(s) 260, 408, 1046, 1454, 1956, 2026
AfiI CCNNNNNNNGG 3 cut(s) 1465, 1552, 1896
AhlI ACTAGT 1 cut(s) 925
AjnI CCWGG 4 cut(s) 977, 1021, 1524, 1714
Alw21I GWGCWC 3 cut(s) 1056, 1239, 1473
Alw26I GTCTC 8 cut(s) 259, 605, 693, 728, 934, 1084, 1524, 2009
Alw44I GTGCAC 1 cut(s) 1469
AlwI GGATC 4 cut(s) 512, 843, 1402, 1563
AlwNI CAGNNNCTG 1 cut(s) 1661
Ama87I CYCGRG 5 cut(s) 1001, 1197, 1545, 1600, 1862
AoxI GGCC 4 cut(s) 436, 1537, 1898, 1944
ApaLI GTGCAC 1 cut(s) 1469
ApeKI GCWGC 8 cut(s) 58, 68, 83, 86, 704, 1341, 1813, 2007
ApoI RAATTY 5 cut(s) 125, 445, 491, 851, 1190
ArsI GACNNNNNNTTYG 2 cut(s) 1257, 1289
Asp700I GAANNNNTTC 1 cut(s) 110
Asp718I GGTACC 1 cut(s) 406
AspA2I CCTAGG 1 cut(s) 1031
AspLEI GCGC 2 cut(s) 80, 193
AspS9I GGNCC 2 cut(s) 654, 1945
AsuC2I CCSGG 2 cut(s) 1601, 1602
AsuHPI GGTGA 6 cut(s) 19, 380, 610, 848, 1231, 1241
AsuII TTCGAA 1 cut(s) 11
AvaI CYCGRG 5 cut(s) 1001, 1197, 1545, 1600, 1862
AvaII GGWCC 1 cut(s) 654
AvrII CCTAGG 1 cut(s) 1031
BaeGI GKGCMC 3 cut(s) 800, 1473, 1607
BanI GGYRCC 4 cut(s) 77, 406, 797, 1604
BanII GRGCYC 2 cut(s) 1056, 1239
BbrPI CACGTG 1 cut(s) 1980
BbsI GAAGAC 2 cut(s) 1977, 2055
Bbv12I GWGCWC 3 cut(s) 1056, 1239, 1473
BbvCI CCTCAGC 1 cut(s) 802
BbvI GCAGC 8 cut(s) 45, 55, 95, 98, 716, 1353, 1800, 2019
BccI CCATC 3 cut(s) 452, 518, 1281
BciT130I CCWGG 4 cut(s) 979, 1023, 1526, 1716
BclI TGATCA 1 cut(s) 181
BcnI CCSGG 2 cut(s) 1601, 1602
BcoDI GTCTC 8 cut(s) 259, 605, 693, 728, 934, 1084, 1524, 2009
BcuI ACTAGT 1 cut(s) 925
BfmI CTRYAG 4 cut(s) 891, 933, 1170, 2002
BfoI RGCGCY 2 cut(s) 81, 194
BfuAI ACCTGC 1 cut(s) 1449
BisI GCNGC 9 cut(s) 59, 69, 81, 84, 87, 705, 1342, 1814, 2008
BlnI CCTAGG 1 cut(s) 1031
BlpI GCTNAGC 1 cut(s) 1233
BlsI GCNGC 9 cut(s) 60, 70, 82, 85, 88, 706, 1343, 1815, 2009
Bme1390I CCNGG 6 cut(s) 979, 1023, 1526, 1601, 1602, 1716
Bme18I GGWCC 1 cut(s) 654
BmeT110I CYCGRG 5 cut(s) 1001, 1197, 1545, 1600, 1862
BmgT120I GGNCC 2 cut(s) 654, 1945
BmiI GGNNCC 8 cut(s) 79, 97, 408, 790, 799, 1606, 1936, 1947
BmrFI CCNGG 6 cut(s) 979, 1023, 1526, 1601, 1602, 1716
BmrI ACTGGG 2 cut(s) 902, 1103
BmsI GCATC 5 cut(s) 289, 1017, 1391, 1433, 1786
BmuI ACTGGG 2 cut(s) 902, 1103
BpiI GAAGAC 2 cut(s) 1977, 2055
BplI GAGNNNNNCTC 2 cut(s) 1553, 1585
BpmI CTGGAG 3 cut(s) 1608, 1614, 1638
Bpu10I CCTNAGC 1 cut(s) 802
Bpu1102I GCTNAGC 1 cut(s) 1233
Bpu14I TTCGAA 1 cut(s) 11
BpuEI CTTGAG 3 cut(s) 566, 766, 1040
BpuMI CCSGG 2 cut(s) 1601, 1602
Bsa29I ATCGAT 1 cut(s) 1129
BsaAI YACGTR 1 cut(s) 1980
BsaBI GATNNNNATC 2 cut(s) 516, 1146
BsaHI GRCGYC 1 cut(s) 78
BsaI GGTCTC 2 cut(s) 259, 2009
BsaJI CCNNGG 9 cut(s) 792, 1022, 1031, 1525, 1551, 1600, 1608, 1715, 1989
BsaXI ACNNNNNCTCC 2 cut(s) 1028, 1058
Bsc4I CCNNNNNNNGG 3 cut(s) 1465, 1552, 1896
Bse118I RCCGGY 1 cut(s) 1942
Bse1I ACTGG 3 cut(s) 908, 1098, 1890
Bse3DI GCAATG 1 cut(s) 1430
Bse8I GATNNNNATC 2 cut(s) 516, 1146
BseBI CCWGG 4 cut(s) 979, 1023, 1526, 1716
BseCI ATCGAT 1 cut(s) 1129
BseDI CCNNGG 9 cut(s) 792, 1022, 1031, 1525, 1551, 1600, 1608, 1715, 1989
BseGI GGATG 4 cut(s) 1032, 1292, 1776, 1879
BseJI GATNNNNATC 2 cut(s) 516, 1146
BseLI CCNNNNNNNGG 3 cut(s) 1465, 1552, 1896
BseMI GCAATG 1 cut(s) 1430
BseMII CTCAG 5 cut(s) 816, 1224, 1521, 1831, 2004
BseNI ACTGG 3 cut(s) 908, 1098, 1890
BseRI GAGGAG 1 cut(s) 1001
BseSI GKGCMC 3 cut(s) 800, 1473, 1607
BseXI GCAGC 8 cut(s) 45, 55, 95, 98, 716, 1353, 1800, 2019
BseYI CCCAGC 3 cut(s) 165, 700, 943
Bsh1236I CGCG 1 cut(s) 2021
BshFI GGCC 4 cut(s) 438, 1539, 1900, 1946
BshNI GGYRCC 4 cut(s) 77, 406, 797, 1604
BshVI ATCGAT 1 cut(s) 1129
BsiHKAI GWGCWC 3 cut(s) 1056, 1239, 1473
BsiHKCI CYCGRG 5 cut(s) 1001, 1197, 1545, 1600, 1862
BsiSI CCGG 3 cut(s) 608, 1601, 1943
BslFI GGGAC 3 cut(s) 890, 1214, 1583
BslI CCNNNNNNNGG 3 cut(s) 1465, 1552, 1896
BsmAI GTCTC 8 cut(s) 259, 605, 693, 728, 934, 1084, 1524, 2009
BsmFI GGGAC 3 cut(s) 890, 1214, 1583
BsmI GAATGC 1 cut(s) 169
BsnI GGCC 4 cut(s) 438, 1539, 1900, 1946
Bso31I GGTCTC 2 cut(s) 259, 2009
BsoBI CYCGRG 5 cut(s) 1001, 1197, 1545, 1600, 1862
Bsp119I TTCGAA 1 cut(s) 11
Bsp1286I GDGCHC 5 cut(s) 800, 1056, 1239, 1473, 1607
Bsp1407I TGTACA 2 cut(s) 258, 2024
Bsp143I GATC 9 cut(s) 181, 517, 835, 1126, 1130, 1147, 1407, 1555, 1923
Bsp1720I GCTNAGC 1 cut(s) 1233
Bsp19I CCATGG 2 cut(s) 1608, 1989
BspACI CCGC 8 cut(s) 81, 221, 1104, 1252, 1522, 1913, 1971, 2019
BspANI GGCC 4 cut(s) 438, 1539, 1900, 1946
BspCNI CTCAG 5 cut(s) 815, 1225, 1520, 1830, 2005
BspDI ATCGAT 1 cut(s) 1129
BspFNI CGCG 1 cut(s) 2021
BspHI TCATGA 1 cut(s) 1732
BspLI GGNNCC 8 cut(s) 79, 97, 408, 790, 799, 1606, 1936, 1947
BspMAI CTGCAG 1 cut(s) 937
BspMI ACCTGC 1 cut(s) 1449
BspPI GGATC 4 cut(s) 512, 843, 1402, 1563
BspT104I TTCGAA 1 cut(s) 11
BspT107I GGYRCC 4 cut(s) 77, 406, 797, 1604
BspTNI GGTCTC 2 cut(s) 259, 2009
BsrDI GCAATG 1 cut(s) 1430
BsrFI RCCGGY 1 cut(s) 1942
BsrGI TGTACA 2 cut(s) 258, 2024
BsrI ACTGG 3 cut(s) 908, 1098, 1890
BssAI RCCGGY 1 cut(s) 1942
BssECI CCNNGG 9 cut(s) 792, 1022, 1031, 1525, 1551, 1600, 1608, 1715, 1989
BssMI GATC 9 cut(s) 181, 517, 835, 1126, 1130, 1147, 1407, 1555, 1923
BssNI GRCGYC 1 cut(s) 78
BssT1I CCWWGG 4 cut(s) 1031, 1551, 1608, 1989
Bst2UI CCWGG 4 cut(s) 979, 1023, 1526, 1716
Bst4CI ACNGT 3 cut(s) 574, 1475, 2059
Bst6I CTCTTC 1 cut(s) 1007
BstACI GRCGYC 1 cut(s) 78
BstAPI GCANNNNNTGC 1 cut(s) 1441
BstAUI TGTACA 2 cut(s) 258, 2024
BstBAI YACGTR 1 cut(s) 1980
BstBI TTCGAA 1 cut(s) 11
BstC8I GCNNGC 4 cut(s) 1489, 1522, 1944, 1971
BstDEI CTNAG 6 cut(s) 728, 802, 1233, 1507, 1817, 2013
BstDSI CCRYGG 3 cut(s) 792, 1608, 1989
BstF5I GGATG 4 cut(s) 1032, 1292, 1776, 1879
BstFNI CGCG 1 cut(s) 2021
BstH2I RGCGCY 2 cut(s) 81, 194
BstHHI GCGC 2 cut(s) 80, 193
BstKTI GATC 9 cut(s) 184, 520, 838, 1129, 1133, 1150, 1410, 1558, 1926
BstMAI GTCTC 8 cut(s) 259, 605, 693, 728, 934, 1084, 1524, 2009
BstMBI GATC 9 cut(s) 181, 517, 835, 1126, 1130, 1147, 1407, 1555, 1923
BstNI CCWGG 4 cut(s) 979, 1023, 1526, 1716
BstNSI RCATGY 1 cut(s) 1875
BstSCI CCNGG 6 cut(s) 977, 1021, 1524, 1599, 1600, 1714
BstSFI CTRYAG 4 cut(s) 891, 933, 1170, 2002
BstSLI GKGCMC 3 cut(s) 800, 1473, 1607
BstUI CGCG 1 cut(s) 2021
BstV1I GCAGC 8 cut(s) 45, 55, 95, 98, 716, 1353, 1800, 2019
BstV2I GAAGAC 2 cut(s) 1977, 2055
BstX2I RGATCY 2 cut(s) 835, 1407
BstYI RGATCY 2 cut(s) 835, 1407
Bsu15I ATCGAT 1 cut(s) 1129
BsuRI GGCC 4 cut(s) 438, 1539, 1900, 1946
BsuTUI ATCGAT 1 cut(s) 1129
BtgI CCRYGG 3 cut(s) 792, 1608, 1989
BtsCI GGATG 4 cut(s) 1032, 1292, 1776, 1879
BtsI GCAGTG 2 cut(s) 434, 1689
BtsIMutI CAGTG 6 cut(s) 434, 1382, 1689, 1897, 2010, 2064
BveI ACCTGC 1 cut(s) 1449
Cac8I GCNNGC 4 cut(s) 1489, 1522, 1944, 1971
CaiI CAGNNNCTG 1 cut(s) 1661
CciI TCATGA 1 cut(s) 1732
CfoI GCGC 2 cut(s) 80, 193
Cfr10I RCCGGY 1 cut(s) 1942
Cfr13I GGNCC 2 cut(s) 654, 1945
Cfr9I CCCGGG 1 cut(s) 1600
ClaI ATCGAT 1 cut(s) 1129
CseI GACGC 1 cut(s) 1333
Csp6I GTAC 6 cut(s) 259, 407, 1045, 1453, 1955, 2025
CspCI CAANNNNNGTGG 2 cut(s) 410, 445
CviQI GTAC 6 cut(s) 259, 407, 1045, 1453, 1955, 2025
DdeI CTNAG 6 cut(s) 728, 802, 1233, 1507, 1817, 2013
DinI GGCGCC 1 cut(s) 79
DpnI GATC 9 cut(s) 183, 519, 837, 1128, 1132, 1149, 1409, 1557, 1925
DpnII GATC 9 cut(s) 181, 517, 835, 1126, 1130, 1147, 1407, 1555, 1923
Eam1104I CTCTTC 1 cut(s) 1007
EarI CTCTTC 1 cut(s) 1007
EciI GGCGGA 1 cut(s) 1119
Ecl136II GAGCTC 2 cut(s) 1054, 1237
Eco130I CCWWGG 4 cut(s) 1031, 1551, 1608, 1989
Eco147I AGGCCT 2 cut(s) 438, 1900
Eco24I GRGCYC 2 cut(s) 1056, 1239
Eco31I GGTCTC 2 cut(s) 259, 2009
Eco32I GATATC 1 cut(s) 603
Eco47I GGWCC 1 cut(s) 654
Eco53kI GAGCTC 2 cut(s) 1054, 1237
Eco57I CTGAAG 3 cut(s) 179, 860, 1031
Eco72I CACGTG 1 cut(s) 1980
Eco88I CYCGRG 5 cut(s) 1001, 1197, 1545, 1600, 1862
EcoICRI GAGCTC 2 cut(s) 1054, 1237
EcoRI GAATTC 2 cut(s) 445, 491
EcoRII CCWGG 4 cut(s) 977, 1021, 1524, 1714
EcoRV GATATC 1 cut(s) 603
EcoT14I CCWWGG 4 cut(s) 1031, 1551, 1608, 1989
EcoT38I GRGCYC 2 cut(s) 1056, 1239
EgeI GGCGCC 1 cut(s) 79
EheI GGCGCC 1 cut(s) 79
ErhI CCWWGG 4 cut(s) 1031, 1551, 1608, 1989
FalI AAGNNNNNCTT 2 cut(s) 1293, 1325
FaqI GGGAC 3 cut(s) 890, 1214, 1583
FauI CCCGC 3 cut(s) 228, 1529, 1978
FauNDI CATATG 1 cut(s) 1573
FbaI TGATCA 1 cut(s) 181
FblI GTMKAC 2 cut(s) 672, 1320
Fnu4HI GCNGC 9 cut(s) 59, 69, 81, 84, 87, 705, 1342, 1814, 2008
FokI GGATG 4 cut(s) 1039, 1299, 1783, 1866
FriOI GRGCYC 2 cut(s) 1056, 1239
Fsp4HI GCNGC 9 cut(s) 59, 69, 81, 84, 87, 705, 1342, 1814, 2008
GlaI GCGC 2 cut(s) 79, 192
GluI GCNGC 9 cut(s) 59, 69, 81, 84, 87, 705, 1342, 1814, 2008
GsaI CCCAGC 3 cut(s) 169, 704, 947
GsuI CTGGAG 3 cut(s) 1608, 1614, 1638
HaeII RGCGCY 2 cut(s) 81, 194
HaeIII GGCC 4 cut(s) 438, 1539, 1900, 1946
HapII CCGG 3 cut(s) 608, 1601, 1943
HgaI GACGC 1 cut(s) 1333
HhaI GCGC 2 cut(s) 80, 193
Hin1I GRCGYC 1 cut(s) 78
Hin6I GCGC 2 cut(s) 78, 191
HinP1I GCGC 2 cut(s) 78, 191
HincII GTYRAC 1 cut(s) 201
HindII GTYRAC 1 cut(s) 201
HindIII AAGCTT 2 cut(s) 1365, 1850
HpaI GTTAAC 1 cut(s) 201
HpaII CCGG 3 cut(s) 608, 1601, 1943
HphI GGTGA 6 cut(s) 19, 380, 610, 848, 1231, 1241
Hpy166II GTNNAC 9 cut(s) 201, 673, 1120, 1321, 1471, 1877, 1955, 2025, 2027
Hpy8I GTNNAC 9 cut(s) 201, 673, 1120, 1321, 1471, 1877, 1955, 2025, 2027
Hpy99I CGWCG 2 cut(s) 299, 1349
HpyAV CCTTC 8 cut(s) 40, 86, 163, 325, 835, 1265, 1639, 1778
HpyCH4III ACNGT 3 cut(s) 574, 1475, 2059
HpyCH4IV ACGT 2 cut(s) 630, 1979
HpyCH4V TGCA 8 cut(s) 61, 935, 1138, 1404, 1435, 1444, 1471, 1777
HpyF3I CTNAG 6 cut(s) 728, 802, 1233, 1507, 1817, 2013
HpySE526I ACGT 2 cut(s) 630, 1979
Hsp92I GRCGYC 1 cut(s) 78
HspAI GCGC 2 cut(s) 78, 191
KasI GGCGCC 1 cut(s) 77
KpnI GGTACC 1 cut(s) 410
KroI GCCGGC 1 cut(s) 1942
KroNI GCCGGC 1 cut(s) 1944
Ksp22I TGATCA 1 cut(s) 181
KspAI GTTAAC 1 cut(s) 201
Kzo9I GATC 9 cut(s) 181, 517, 835, 1126, 1130, 1147, 1407, 1555, 1923
LmnI GCTCC 3 cut(s) 95, 1051, 1627
Lsp1109I GCAGC 8 cut(s) 45, 55, 95, 98, 716, 1353, 1800, 2019
LweI GCATC 5 cut(s) 289, 1017, 1391, 1433, 1786
MaeII ACGT 2 cut(s) 630, 1979
MaeIII GTNAC 2 cut(s) 910, 1475
MalI GATC 9 cut(s) 183, 519, 837, 1128, 1132, 1149, 1409, 1557, 1925
MboI GATC 9 cut(s) 181, 517, 835, 1126, 1130, 1147, 1407, 1555, 1923
MboII GAAGA 7 cut(s) 165, 895, 1024, 1721, 1808, 1977, 2055
MflI RGATCY 2 cut(s) 835, 1407
MhlI GDGCHC 5 cut(s) 800, 1056, 1239, 1473, 1607
Mly113I GGCGCC 1 cut(s) 78
MlyI GAGTC 8 cut(s) 137, 534, 695, 776, 957, 998, 1499, 1605
MmeI TCCRAC 2 cut(s) 230, 931
MroNI GCCGGC 1 cut(s) 1942
MroXI GAANNNNTTC 1 cut(s) 110
MseI TTAA 6 cut(s) 23, 123, 200, 759, 1722, 1848
MslI CAYNNNNRTG 1 cut(s) 2057
MspI CCGG 3 cut(s) 608, 1601, 1943
MspR9I CCNGG 6 cut(s) 979, 1023, 1526, 1601, 1602, 1716
Mva1269I GAATGC 1 cut(s) 169
MvaI CCWGG 4 cut(s) 979, 1023, 1526, 1716
MvnI CGCG 1 cut(s) 2021
NaeI GCCGGC 1 cut(s) 1944
NarI GGCGCC 1 cut(s) 78
NciI CCSGG 2 cut(s) 1601, 1602
NcoI CCATGG 2 cut(s) 1608, 1989
NdeI CATATG 1 cut(s) 1573
NdeII GATC 9 cut(s) 181, 517, 835, 1126, 1130, 1147, 1407, 1555, 1923
NgoMIV GCCGGC 1 cut(s) 1942
NlaIV GGNNCC 8 cut(s) 79, 97, 408, 790, 799, 1606, 1936, 1947
NmuCI GTSAC 1 cut(s) 1475
NspI RCATGY 1 cut(s) 1875
NspV TTCGAA 1 cut(s) 11
PagI TCATGA 1 cut(s) 1732
PceI AGGCCT 2 cut(s) 438, 1900
PcsI WCGNNNNNNNCGW 1 cut(s) 1786
PctI GAATGC 1 cut(s) 169
PdiI GCCGGC 1 cut(s) 1944
PdmI GAANNNNTTC 1 cut(s) 110
PfeI GAWTC 3 cut(s) 1107, 1658, 1726
PflMI CCANNNNNTGG 1 cut(s) 1465
PkrI GCNGC 9 cut(s) 60, 70, 82, 85, 88, 706, 1343, 1815, 2009
PleI GAGTC 8 cut(s) 137, 534, 694, 775, 956, 997, 1499, 1604
PluTI GGCGCC 1 cut(s) 81
PmaCI CACGTG 1 cut(s) 1980
PmlI CACGTG 1 cut(s) 1980
PpsI GAGTC 8 cut(s) 137, 534, 694, 775, 956, 997, 1499, 1604
Ppu21I YACGTR 1 cut(s) 1980
Psp124BI GAGCTC 2 cut(s) 1056, 1239
Psp1406I AACGTT 1 cut(s) 630
Psp6I CCWGG 4 cut(s) 977, 1021, 1524, 1714
PspCI CACGTG 1 cut(s) 1980
PspFI CCCAGC 3 cut(s) 165, 700, 943
PspGI CCWGG 4 cut(s) 977, 1021, 1524, 1714
PspN4I GGNNCC 8 cut(s) 79, 97, 408, 790, 799, 1606, 1936, 1947
PspPI GGNCC 2 cut(s) 654, 1945
PstI CTGCAG 1 cut(s) 937
PstNI CAGNNNCTG 1 cut(s) 1661
PsuI RGATCY 2 cut(s) 835, 1407
RsaI GTAC 6 cut(s) 260, 408, 1046, 1454, 1956, 2026
RsaNI GTAC 6 cut(s) 259, 407, 1045, 1453, 1955, 2025
RseI CAYNNNNRTG 1 cut(s) 2057
SacI GAGCTC 2 cut(s) 1056, 1239
SaqAI TTAA 6 cut(s) 23, 123, 200, 759, 1722, 1848
SatI GCNGC 9 cut(s) 59, 69, 81, 84, 87, 705, 1342, 1814, 2008
Sau3AI GATC 9 cut(s) 181, 517, 835, 1126, 1130, 1147, 1407, 1555, 1923
Sau96I GGNCC 2 cut(s) 654, 1945
SchI GAGTC 8 cut(s) 137, 534, 695, 776, 957, 998, 1499, 1605
ScrFI CCNGG 6 cut(s) 979, 1023, 1526, 1601, 1602, 1716
SduI GDGCHC 5 cut(s) 800, 1056, 1239, 1473, 1607
SfaNI GCATC 5 cut(s) 289, 1017, 1391, 1433, 1786
SfcI CTRYAG 4 cut(s) 891, 933, 1170, 2002
SfoI GGCGCC 1 cut(s) 79
SfuI TTCGAA 1 cut(s) 11
SinI GGWCC 1 cut(s) 654
SmaI CCCGGG 1 cut(s) 1602
SmiMI CAYNNNNRTG 1 cut(s) 2057
SmlI CTYRAG 3 cut(s) 581, 745, 1055
SmoI CTYRAG 3 cut(s) 581, 745, 1055
SpeI ACTAGT 1 cut(s) 925
SseBI AGGCCT 2 cut(s) 438, 1900
SsiI CCGC 8 cut(s) 81, 221, 1104, 1252, 1522, 1913, 1971, 2019
SspDI GGCGCC 1 cut(s) 77
SstI GAGCTC 2 cut(s) 1056, 1239
StuI AGGCCT 2 cut(s) 438, 1900
StyD4I CCNGG 6 cut(s) 977, 1021, 1524, 1599, 1600, 1714
StyI CCWWGG 4 cut(s) 1031, 1551, 1608, 1989
TaaI ACNGT 3 cut(s) 574, 1475, 2059
TaiI ACGT 2 cut(s) 633, 1982
TaqI TCGA 8 cut(s) 11, 495, 516, 666, 1129, 1347, 1758, 1780
TatI WGTACW 3 cut(s) 258, 1044, 2024
TauI GCSGC 1 cut(s) 83
TfiI GAWTC 3 cut(s) 1107, 1658, 1726
Tru1I TTAA 6 cut(s) 23, 123, 200, 759, 1722, 1848
Tru9I TTAA 6 cut(s) 23, 123, 200, 759, 1722, 1848
TscAI CASTG 6 cut(s) 434, 1389, 1689, 1897, 2017, 2064
TseFI GTSAC 1 cut(s) 1475
TseI GCWGC 8 cut(s) 58, 68, 83, 86, 704, 1341, 1813, 2007
Tsp45I GTSAC 1 cut(s) 1475
TspDTI ATGAA 6 cut(s) 147, 1216, 1318, 1721, 1749, 1854
TspGWI ACGGA 1 cut(s) 515
TspMI CCCGGG 1 cut(s) 1600
TspRI CASTG 6 cut(s) 434, 1389, 1689, 1897, 2017, 2064
Van91I CCANNNNNTGG 1 cut(s) 1465
VneI GTGCAC 1 cut(s) 1469
VpaK11BI GGWCC 1 cut(s) 654
XapI RAATTY 5 cut(s) 125, 445, 491, 851, 1190
XceI RCATGY 1 cut(s) 1875
XcmI CCANNNNNNNNNTGG 1 cut(s) 1928
XmaI CCCGGG 1 cut(s) 1600
XmaJI CCTAGG 1 cut(s) 1031
XmiI GTMKAC 2 cut(s) 672, 1320
XmnI GAANNNNTTC 1 cut(s) 110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.