FvH4_2g17160

L-type lectin-domain containing receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000688
Physical Location & Seq
Forward (+)
14880332 .. 14883663
3332 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g17160.t1

Sequence Viewer

Length: 2073 bp
ATGAACCAAAATCAAAGAGGAAAATATATGGCTTTTCCTCATCATAGATTATTCATCACCTACTTAGTTTATACCTTCGCCATTATCTTTGTAGCATCAGCTGCTGATCCTAGGCATTTCCCCTTTACCTCATTCAATGAAAAAACCGACCAAAATCTATTCCATTTCGGTTCGCCGGCGCCTTATTCTTCCATCGATAATGGGGCACTTCAGTTAACCCCAGACTCTGAGAATGCAGCCGTCAGCTATCTTAACAAGGCCGGCAGGATCATGTATCACAAACCTTATAGACTCTGGTCATCTGACAATGAAGCCGATGATGAAGTTGCCTCTTTCAACTCAACTTTCCTCATGAACATCTACCGTGAAAATGACTGGATTGCTGGTGAGGGGTTTGCTTTTCTTATTGCCTCGGATTGGATCATTCCTGAAAACAGTTATGGGCAGTGGCTTGGCCTCACCAATGCCACCACCGATGGCAATGCTGCAAACCACATGGTTGCCATAGAATTCGACACAAGAAAGCAAGATTTCGACCCCGACGACAACCATATAGGCCTCAACATCAACTCTGCAATATCAAGTAAGACTGTTTCACTTGAGCCTTTCGATATTGAGATATCGCCGGAAGGAGGCACCAACTACACCGTGTGGGTGCAATACAATGGCAGTACCAAAGTCCTTGAAGTCTACATGGCTAAGCGCATCTTAACCATCCCAGCAGTAAGGCCCGAGACACCACTTATGAGGGAGACAATAAACTTGAAACGTTATCTAAAACAAGACTCCTACTTTGGATTTTCTGGTTCCACTGGTAGCCCGGCAAAACAGCTAAACTGTGTGCTGGAATGGAATCTAGAGGTTCAAGAATTCAAGAACAGAAAGAACATGACTTTGTTGAAGGTCGGTGTGCCAGCATTGGTTGTGTTAGTACTATTTGGTATTATTGTGGGAGTTCTCTTTGTGAAGAAGAGGAAAAGAACCAGTCTTGAAGAGTCCCTTGTGCTTGGGACACTAAAAAGATTGCCAGGGATGCCGAGGGAGTTCAAGTACAAAGAGCTCAAGGATGCAACTAATAATTTCCATGCCAGTATGATCCTGGGAAAAGGTGGATTTGGCATTGTTTACAGAGGGACTCTGCGTGATTTTGATGCTGCATATGGTATTGATACCTCTGCAGAAATTGCTGTCAAGCAATTCTCAAGAGACAACATCAAAGGCAAAGATGATTTCATGGCAGAACTGACCATTATTCACCGCCTTCGCCACAAAAATCTGGTCCGGTTAGTAGGATGGTGCTATGAGAAAGGAAAGCTTCTTTTAGTGTATGATTTCATGCCAAACGGTAGTGTCGATAGGCACCTATATGAAGCTTCAAACCAGAATACACTCAGTTGGGAGCATAGATGCAAGATCCTAGCTGGTGTGGCATCAGCATTGCATTACCTGCAAAATGAGTATGACCAAAAAGTGGTGCACCGCGACCTCAAAGCTAGTAACATATTGCTCGACTCTGAGTTCAATGCTCGCCTTGGAGACTTCGGCCTTGCCCGAGCCTTGGAACAAGAGAGGAACTCATATGCTGAACTAGGGCTAGCAGGCGTCGCAGGTACCCTAGGCTATGTTGCTCCTGAGTGCTTCCATACAAGGAAGGCTACTCCAGAATCTGATGTTTTTGGTTTTGGGGCAGTTGTGCTTGAGATTGTGTGTGGGAAAAGTCCTGGGATTCAGATTACTCATGGACAACACCAATTTTCTTTGGTTGATTGGGTGTGGATGTTGCATCGAGAAGGATGTATTGAGGAAGCTGTAGATGAGCGACTGAACAGTAATTATGAGTTGGATGAAGCAAAGAAGCTTTTGCTTCTCGGGTTGGCATGTTCACATCCTATTGCCAGTGAGCGGCCTCAAACACAAGCCATATGCCAGATTATATCTGGAACCATGTCGGTCCCTAGTGTGCCTCCATTCAAACCAGTTTTCACATGGCCTTCCATGGATACTGCATACAGCAGCACCGACAGTACAGTTTCTAACATCACTCTTTCTAGGATCACACTAACACTTCCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase Pkinase_Tyr

Protein Analysis

691

Amino Acids

77.51

Weight (kDa)

6.2

Isoelectric Point (pI)

36.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 39 - 298 4.3e-64 Legume lectin domain
Pkinase PF00069 362 - 641 1.8e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 365 - 596 3.2e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000688)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09820 FvH4_2g17160 FvH4_2g17160
malus_domestica MD02G1107100.v1.1 MD02G1107300.v1.1 MD05G1144900.v1.1 MD10G1144700.v1.1 MD15G1226500.v1.1
prunus_persica Prupe.7G188700_v2.0.a1 Prupe.7G188700_v2.0.a1 Prupe.7G188700_v2.0.a1 Prupe.8G183000_v2.0.a1
pyrus_communis pycom05g14000 pycom10g12440 pycom15g20140
rosa_chinensis RchiOBHm_Chr2g0096621 RchiOBHm_Chr6g0281601 RchiOBHm_Chr6g0281651 RchiOBHm_Chr7g0212121
rosa_laevigata RLG00000002926 RLG00000002927 RLG00000002933 RLG00000008638 RLG00000012954 RLG00000012955 RLG00000016656
rosa_multiflora Rmu_co8091766.1_g000001 Rmu_co8287847.1_g000001 Rmu_co8297221.1_g000001 Rmu_co8485327.1_g000001 Rmu_co8512767.1_g000001 Rmu_sc0002316.1_g000041 Rmu_sc0003565.1_g000009 Rmu_sc0014556.1_g000004 Rmu_sc0027573.1_g000001 Rmu_sc0030028.1_g000001
rosa_roxburghii Rroxscaffold_1G00026540 Rroxscaffold_2G00145470 Rroxscaffold_3G00247100 Rroxscaffold_3G00247110 Rroxscaffold_3G00247120 Rroxscaffold_5G00362680 Rroxscaffold_5G00362710 Rroxscaffold_7G00186950
rosa_rugosa Rorug02G0059000 Rorug02G0059100 Rorug06G0142300 Rorug07G0131000 Rorug07G0131100
rosa_samantha Rh1DG155700 Rh2AG106500 Rh2AG171500 Rh2BG108800 Rh2BG178900 Rh2CG110600 Rh2CG176400 Rh2DG110100 Rh2DG177600 Rh4BG120600 Rh6BG258300 Rh6CG257100 Rh6DG249200 Rh6DG249300 Rh7AG264100 Rh7AG264200 Rh7BG257800 Rh7BG257900 Rh7BG258000 Rh7BG258100 Rh7CG280600 Rh7CG280700 Rh7DG270600
rosa_wichuraiana Rw2G008240 Rw6G022110 Rw7G022540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1455, 1598
Acc65I GGTACC 1 cut(s) 1610
AccB1I GGYRCC 4 cut(s) 178, 635, 1359, 1610
AccB7I CCANNNNNTGG 1 cut(s) 1471
AccBSI CCGCTC 1 cut(s) 1903
AccI GTMKAC 1 cut(s) 690
AccII CGCG 1 cut(s) 1482
AciI CCGC 3 cut(s) 1258, 1480, 1903
AclI AACGTT 1 cut(s) 769
AclWI GGATC 6 cut(s) 101, 275, 428, 1090, 1408, 2060
AcsI RAATTY 2 cut(s) 509, 869
AcuI CTGAAG 1 cut(s) 194
AcyI GRCGYC 2 cut(s) 179, 1602
AdeI CACNNNGTG 1 cut(s) 651
AfaI GTAC 5 cut(s) 673, 933, 1052, 1612, 2026
AfiI CCNNNNNNNGG 5 cut(s) 417, 632, 1471, 1558, 1902
AjnI CCWGG 3 cut(s) 1027, 1098, 1720
Alw21I GWGCWC 2 cut(s) 1062, 1479
Alw26I GTCTC 4 cut(s) 728, 746, 1200, 1530
Alw44I GTGCAC 1 cut(s) 1475
AlwI GGATC 6 cut(s) 101, 275, 428, 1090, 1408, 2060
AlwNI CAGNNNCTG 3 cut(s) 104, 227, 1667
Ama87I CYCGRG 3 cut(s) 731, 1551, 1868
AoxI GGCC 7 cut(s) 258, 454, 556, 728, 1543, 1904, 1988
ApaLI GTGCAC 1 cut(s) 1475
ApeKI GCWGC 5 cut(s) 101, 236, 485, 1154, 2013
ApoI RAATTY 2 cut(s) 509, 869
ArsI GACNNNNNNTTYG 4 cut(s) 776, 808, 1263, 1295
Asp718I GGTACC 1 cut(s) 1610
AspA2I CCTAGG 2 cut(s) 110, 1615
AspLEI GCGC 2 cut(s) 181, 705
AspS9I GGNCC 3 cut(s) 729, 1279, 1951
AsuC2I CCSGG 1 cut(s) 821
AsuHPI GGTGA 4 cut(s) 49, 398, 451, 1247
AsuNHI GCTAGC 1 cut(s) 1594
AvaI CYCGRG 3 cut(s) 731, 1551, 1868
AvaII GGWCC 2 cut(s) 1279, 1951
AvrII CCTAGG 2 cut(s) 110, 1615
BaeGI GKGCMC 2 cut(s) 208, 1479
BanI GGYRCC 4 cut(s) 178, 635, 1359, 1610
BanII GRGCYC 1 cut(s) 1062
Bbv12I GWGCWC 2 cut(s) 1062, 1479
BbvI GCAGC 5 cut(s) 88, 248, 472, 1141, 2025
BccI CCATC 4 cut(s) 200, 470, 722, 1287
BceAI ACGGC 1 cut(s) 224
BcgI CGANNNNNNTGC 2 cut(s) 464, 498
BciT130I CCWGG 3 cut(s) 1029, 1100, 1722
BciVI GTATCC 1 cut(s) 1993
BcnI CCSGG 1 cut(s) 821
BcoDI GTCTC 4 cut(s) 728, 746, 1200, 1530
BfmI CTRYAG 2 cut(s) 1176, 1809
BfoI RGCGCY 1 cut(s) 182
BfuAI ACCTGC 2 cut(s) 1455, 1598
BfuI GTATCC 1 cut(s) 1993
BisI GCNGC 6 cut(s) 102, 237, 486, 1155, 1904, 2014
BlnI CCTAGG 2 cut(s) 110, 1615
BlpI GCTNAGC 1 cut(s) 699
BlsI GCNGC 6 cut(s) 103, 238, 487, 1156, 1905, 2015
BmcAI AGTACT 1 cut(s) 933
Bme1390I CCNGG 4 cut(s) 821, 1029, 1100, 1722
Bme18I GGWCC 2 cut(s) 1279, 1951
BmeT110I CYCGRG 3 cut(s) 731, 1551, 1868
BmgT120I GGNCC 3 cut(s) 729, 1279, 1951
BmiI GGNNCC 7 cut(s) 180, 637, 808, 1361, 1612, 1942, 1953
BmrFI CCNGG 4 cut(s) 821, 1029, 1100, 1722
BmsI GCATC 8 cut(s) 104, 714, 1023, 1057, 1141, 1397, 1439, 1792
BmtI GCTAGC 1 cut(s) 1598
BoxI GACNNNNGTC 1 cut(s) 295
BplI GAGNNNNNCTC 2 cut(s) 1559, 1591
BpmI CTGGAG 1 cut(s) 1644
Bpu1102I GCTNAGC 1 cut(s) 699
BpuEI CTTGAG 4 cut(s) 620, 1046, 1186, 1718
BpuMI CCSGG 1 cut(s) 821
Bsa29I ATCGAT 1 cut(s) 195
BsaHI GRCGYC 2 cut(s) 179, 1602
BsaWI WCCGGW 1 cut(s) 1281
BsaXI ACNNNNNCTCC 2 cut(s) 1034, 1064
Bsc4I CCNNNNNNNGG 5 cut(s) 417, 632, 1471, 1558, 1902
Bse118I RCCGGY 2 cut(s) 175, 260
Bse1I ACTGG 6 cut(s) 380, 817, 984, 1089, 1896, 1976
Bse3DI GCAATG 2 cut(s) 487, 1436
BseBI CCWGG 3 cut(s) 1029, 1100, 1722
BseCI ATCGAT 1 cut(s) 195
BseGI GGATG 8 cut(s) 714, 1038, 1072, 1298, 1782, 1799, 1849, 1885
BseLI CCNNNNNNNGG 5 cut(s) 417, 632, 1471, 1558, 1902
BseMI GCAATG 2 cut(s) 487, 1436
BseMII CTCAG 4 cut(s) 219, 1405, 1506, 1623
BseNI ACTGG 6 cut(s) 380, 817, 984, 1089, 1896, 1976
BseSI GKGCMC 2 cut(s) 208, 1479
BseXI GCAGC 5 cut(s) 88, 248, 472, 1141, 2025
BseYI CCCAGC 1 cut(s) 718
Bsh1236I CGCG 1 cut(s) 1482
BshFI GGCC 7 cut(s) 260, 456, 558, 730, 1545, 1906, 1990
BshNI GGYRCC 4 cut(s) 178, 635, 1359, 1610
BshVI ATCGAT 1 cut(s) 195
BsiHKAI GWGCWC 2 cut(s) 1062, 1479
BsiHKCI CYCGRG 3 cut(s) 731, 1551, 1868
BsiSI CCGG 5 cut(s) 176, 261, 626, 821, 1282
BslFI GGGAC 4 cut(s) 982, 1024, 1147, 1937
BslI CCNNNNNNNGG 5 cut(s) 417, 632, 1471, 1558, 1902
BsmAI GTCTC 4 cut(s) 728, 746, 1200, 1530
BsmFI GGGAC 4 cut(s) 982, 1024, 1147, 1937
BsmI GAATGC 1 cut(s) 238
BsnI GGCC 7 cut(s) 260, 456, 558, 730, 1545, 1906, 1990
BsoBI CYCGRG 3 cut(s) 731, 1551, 1868
Bsp1286I GDGCHC 3 cut(s) 208, 1062, 1479
Bsp143I GATC 6 cut(s) 106, 267, 420, 1095, 1413, 2052
Bsp1720I GCTNAGC 1 cut(s) 699
Bsp19I CCATGG 1 cut(s) 1995
BspACI CCGC 3 cut(s) 1258, 1480, 1903
BspANI GGCC 7 cut(s) 260, 456, 558, 730, 1545, 1906, 1990
BspCNI CTCAG 4 cut(s) 220, 1404, 1507, 1624
BspDI ATCGAT 1 cut(s) 195
BspFNI CGCG 1 cut(s) 1482
BspHI TCATGA 1 cut(s) 351
BspLI GGNNCC 7 cut(s) 180, 637, 808, 1361, 1612, 1942, 1953
BspMAI CTGCAG 1 cut(s) 1180
BspMI ACCTGC 2 cut(s) 1455, 1598
BspOI GCTAGC 1 cut(s) 1598
BspPI GGATC 6 cut(s) 101, 275, 428, 1090, 1408, 2060
BspT107I GGYRCC 4 cut(s) 178, 635, 1359, 1610
BsrBI CCGCTC 1 cut(s) 1903
BsrDI GCAATG 2 cut(s) 487, 1436
BsrFI RCCGGY 2 cut(s) 175, 260
BsrI ACTGG 6 cut(s) 380, 817, 984, 1089, 1896, 1976
BssAI RCCGGY 2 cut(s) 175, 260
BssMI GATC 6 cut(s) 106, 267, 420, 1095, 1413, 2052
BssNI GRCGYC 2 cut(s) 179, 1602
BssT1I CCWWGG 5 cut(s) 110, 1531, 1557, 1615, 1995
Bst2UI CCWGG 3 cut(s) 1029, 1100, 1722
Bst4CI ACNGT 9 cut(s) 365, 437, 592, 649, 839, 1346, 1829, 2024, 2029
Bst6I CTCTTC 2 cut(s) 965, 987
BstACI GRCGYC 2 cut(s) 179, 1602
BstAPI GCANNNNNTGC 3 cut(s) 101, 1184, 1447
BstC8I GCNNGC 6 cut(s) 177, 262, 915, 1528, 1596, 1600
BstDEI CTNAG 6 cut(s) 64, 228, 699, 1391, 1515, 1632
BstDSI CCRYGG 1 cut(s) 1995
BstF5I GGATG 8 cut(s) 714, 1038, 1072, 1298, 1782, 1799, 1849, 1885
BstFNI CGCG 1 cut(s) 1482
BstH2I RGCGCY 1 cut(s) 182
BstHHI GCGC 2 cut(s) 181, 705
BstKTI GATC 6 cut(s) 109, 270, 423, 1098, 1416, 2055
BstMAI GTCTC 4 cut(s) 728, 746, 1200, 1530
BstMBI GATC 6 cut(s) 106, 267, 420, 1095, 1413, 2052
BstMWI GCNNNNNNNGC 6 cut(s) 101, 1033, 1184, 1427, 1447, 1604
BstNI CCWGG 3 cut(s) 1029, 1100, 1722
BstNSI RCATGY 1 cut(s) 1881
BstPAI GACNNNNGTC 1 cut(s) 295
BstSCI CCNGG 4 cut(s) 819, 1027, 1098, 1720
BstSFI CTRYAG 2 cut(s) 1176, 1809
BstSLI GKGCMC 2 cut(s) 208, 1479
BstUI CGCG 1 cut(s) 1482
BstV1I GCAGC 5 cut(s) 88, 248, 472, 1141, 2025
BstX2I RGATCY 1 cut(s) 1413
BstYI RGATCY 1 cut(s) 1413
Bsu15I ATCGAT 1 cut(s) 195
BsuI GTATCC 1 cut(s) 1993
BsuRI GGCC 7 cut(s) 260, 456, 558, 730, 1545, 1906, 1990
BsuTUI ATCGAT 1 cut(s) 195
BtgI CCRYGG 1 cut(s) 1995
BtsCI GGATG 8 cut(s) 714, 1038, 1072, 1298, 1782, 1799, 1849, 1885
BtsI GCAGTG 1 cut(s) 452
BtsIMutI CAGTG 3 cut(s) 452, 810, 1903
BveI ACCTGC 2 cut(s) 1455, 1598
Cac8I GCNNGC 6 cut(s) 177, 262, 915, 1528, 1596, 1600
CaiI CAGNNNCTG 3 cut(s) 104, 227, 1667
CciI TCATGA 1 cut(s) 351
CfoI GCGC 2 cut(s) 181, 705
Cfr10I RCCGGY 2 cut(s) 175, 260
Cfr13I GGNCC 3 cut(s) 729, 1279, 1951
ClaI ATCGAT 1 cut(s) 195
CseI GACGC 1 cut(s) 1591
Csp6I GTAC 5 cut(s) 672, 932, 1051, 1611, 2025
CviQI GTAC 5 cut(s) 672, 932, 1051, 1611, 2025
DdeI CTNAG 6 cut(s) 64, 228, 699, 1391, 1515, 1632
DinI GGCGCC 1 cut(s) 180
DpnI GATC 6 cut(s) 108, 269, 422, 1097, 1415, 2054
DpnII GATC 6 cut(s) 106, 267, 420, 1095, 1413, 2052
DraIII CACNNNGTG 1 cut(s) 651
Eam1104I CTCTTC 2 cut(s) 965, 987
EarI CTCTTC 2 cut(s) 965, 987
Ecl136II GAGCTC 1 cut(s) 1060
Eco130I CCWWGG 5 cut(s) 110, 1531, 1557, 1615, 1995
Eco147I AGGCCT 1 cut(s) 558
Eco24I GRGCYC 1 cut(s) 1062
Eco32I GATATC 1 cut(s) 621
Eco47I GGWCC 2 cut(s) 1279, 1951
Eco53kI GAGCTC 1 cut(s) 1060
Eco57I CTGAAG 1 cut(s) 194
Eco88I CYCGRG 3 cut(s) 731, 1551, 1868
EcoICRI GAGCTC 1 cut(s) 1060
EcoRI GAATTC 2 cut(s) 509, 869
EcoRII CCWGG 3 cut(s) 1027, 1098, 1720
EcoRV GATATC 1 cut(s) 621
EcoT14I CCWWGG 5 cut(s) 110, 1531, 1557, 1615, 1995
EcoT38I GRGCYC 1 cut(s) 1062
EgeI GGCGCC 1 cut(s) 180
EheI GGCGCC 1 cut(s) 180
ErhI CCWWGG 5 cut(s) 110, 1531, 1557, 1615, 1995
FalI AAGNNNNNCTT 6 cut(s) 692, 724, 984, 1016, 1299, 1331
FaqI GGGAC 4 cut(s) 982, 1024, 1147, 1937
FauNDI CATATG 3 cut(s) 1159, 1579, 1922
FblI GTMKAC 1 cut(s) 690
Fnu4HI GCNGC 6 cut(s) 102, 237, 486, 1155, 1904, 2014
FokI GGATG 8 cut(s) 701, 1045, 1079, 1305, 1789, 1806, 1856, 1872
FriOI GRGCYC 1 cut(s) 1062
Fsp4HI GCNGC 6 cut(s) 102, 237, 486, 1155, 1904, 2014
GlaI GCGC 2 cut(s) 180, 704
GluI GCNGC 6 cut(s) 102, 237, 486, 1155, 1904, 2014
GsaI CCCAGC 1 cut(s) 722
GsuI CTGGAG 1 cut(s) 1644
HaeII RGCGCY 1 cut(s) 182
HaeIII GGCC 7 cut(s) 260, 456, 558, 730, 1545, 1906, 1990
HapII CCGG 5 cut(s) 176, 261, 626, 821, 1282
HgaI GACGC 1 cut(s) 1591
HhaI GCGC 2 cut(s) 181, 705
Hin1I GRCGYC 2 cut(s) 179, 1602
Hin6I GCGC 2 cut(s) 179, 703
HinP1I GCGC 2 cut(s) 179, 703
HincII GTYRAC 1 cut(s) 216
HindII GTYRAC 1 cut(s) 216
HindIII AAGCTT 3 cut(s) 1313, 1371, 1856
HinfI GANTC 9 cut(s) 224, 291, 785, 853, 995, 1135, 1511, 1664, 1726
HpaI GTTAAC 1 cut(s) 216
HpaII CCGG 5 cut(s) 176, 261, 626, 821, 1282
HphI GGTGA 4 cut(s) 49, 398, 451, 1247
Hpy166II GTNNAC 5 cut(s) 216, 691, 1126, 1477, 1883
Hpy188I TCNGA 6 cut(s) 229, 304, 415, 1516, 1669, 1731
Hpy8I GTNNAC 5 cut(s) 216, 691, 1126, 1477, 1883
Hpy99I CGWCG 2 cut(s) 545, 1607
HpyAV CCTTC 7 cut(s) 85, 623, 895, 1271, 1645, 1784, 2001
HpyCH4III ACNGT 9 cut(s) 365, 437, 592, 649, 839, 1346, 1829, 2024, 2029
HpyCH4IV ACGT 1 cut(s) 769
HpyF10VI GCNNNNNNNGC 6 cut(s) 101, 1033, 1184, 1427, 1447, 1604
HpyF3I CTNAG 6 cut(s) 64, 228, 699, 1391, 1515, 1632
HpySE526I ACGT 1 cut(s) 769
Hsp92I GRCGYC 2 cut(s) 179, 1602
HspAI GCGC 2 cut(s) 179, 703
KasI GGCGCC 1 cut(s) 178
KpnI GGTACC 1 cut(s) 1614
KroI GCCGGC 2 cut(s) 175, 260
KroNI GCCGGC 2 cut(s) 177, 262
KspAI GTTAAC 1 cut(s) 216
Kzo9I GATC 6 cut(s) 106, 267, 420, 1095, 1413, 2052
LmnI GCTCC 2 cut(s) 1399, 1633
Lsp1109I GCAGC 5 cut(s) 88, 248, 472, 1141, 2025
LweI GCATC 8 cut(s) 104, 714, 1023, 1057, 1141, 1397, 1439, 1792
MaeII ACGT 1 cut(s) 769
MaeIII GTNAC 1 cut(s) 1496
MalI GATC 6 cut(s) 108, 269, 422, 1097, 1415, 2054
MbiI CCGCTC 1 cut(s) 1903
MboI GATC 6 cut(s) 106, 267, 420, 1095, 1413, 2052
MboII GAAGA 4 cut(s) 180, 979, 982, 1004
MflI RGATCY 1 cut(s) 1413
MhlI GDGCHC 3 cut(s) 208, 1062, 1479
MluCI AATT 7 cut(s) 509, 869, 1078, 1182, 1196, 1751, 1831
Mly113I GGCGCC 1 cut(s) 179
MlyI GAGTC 6 cut(s) 218, 285, 779, 1004, 1129, 1505
MmeI TCCRAC 1 cut(s) 1821
MreI CGCCGGCG 1 cut(s) 175
MroNI GCCGGC 2 cut(s) 175, 260
MseI TTAA 3 cut(s) 215, 252, 710
MslI CAYNNNNRTG 1 cut(s) 1365
MspA1I CMGCKG 1 cut(s) 101
MspI CCGG 5 cut(s) 176, 261, 626, 821, 1282
MspR9I CCNGG 4 cut(s) 821, 1029, 1100, 1722
Mva1269I GAATGC 1 cut(s) 238
MvaI CCWGG 3 cut(s) 1029, 1100, 1722
MvnI CGCG 1 cut(s) 1482
MwoI GCNNNNNNNGC 6 cut(s) 101, 1033, 1184, 1427, 1447, 1604
NaeI GCCGGC 2 cut(s) 177, 262
NarI GGCGCC 1 cut(s) 179
NciI CCSGG 1 cut(s) 821
NcoI CCATGG 1 cut(s) 1995
NdeI CATATG 3 cut(s) 1159, 1579, 1922
NdeII GATC 6 cut(s) 106, 267, 420, 1095, 1413, 2052
NgoMIV GCCGGC 2 cut(s) 175, 260
NheI GCTAGC 1 cut(s) 1594
NlaIV GGNNCC 7 cut(s) 180, 637, 808, 1361, 1612, 1942, 1953
NmeAIII GCCGAG 1 cut(s) 1062
NspI RCATGY 1 cut(s) 1881
PagI TCATGA 1 cut(s) 351
PceI AGGCCT 1 cut(s) 558
PcsI WCGNNNNNNNCGW 2 cut(s) 540, 1350
PctI GAATGC 1 cut(s) 238
PdiI GCCGGC 2 cut(s) 177, 262
PfeI GAWTC 3 cut(s) 853, 1664, 1726
PflMI CCANNNNNTGG 1 cut(s) 1471
PkrI GCNGC 6 cut(s) 103, 238, 487, 1156, 1905, 2015
PleI GAGTC 6 cut(s) 218, 285, 779, 1003, 1129, 1505
PluTI GGCGCC 1 cut(s) 182
PpsI GAGTC 6 cut(s) 218, 285, 779, 1003, 1129, 1505
PshAI GACNNNNGTC 1 cut(s) 295
Psp124BI GAGCTC 1 cut(s) 1062
Psp1406I AACGTT 1 cut(s) 769
Psp6I CCWGG 3 cut(s) 1027, 1098, 1720
PspFI CCCAGC 1 cut(s) 718
PspGI CCWGG 3 cut(s) 1027, 1098, 1720
PspN4I GGNNCC 7 cut(s) 180, 637, 808, 1361, 1612, 1942, 1953
PspPI GGNCC 3 cut(s) 729, 1279, 1951
PstI CTGCAG 1 cut(s) 1180
PstNI CAGNNNCTG 3 cut(s) 104, 227, 1667
PsuI RGATCY 1 cut(s) 1413
PvuII CAGCTG 1 cut(s) 101
RsaI GTAC 5 cut(s) 673, 933, 1052, 1612, 2026
RsaNI GTAC 5 cut(s) 672, 932, 1051, 1611, 2025
RseI CAYNNNNRTG 1 cut(s) 1365
SacI GAGCTC 1 cut(s) 1062
SaqAI TTAA 3 cut(s) 215, 252, 710
SatI GCNGC 6 cut(s) 102, 237, 486, 1155, 1904, 2014
Sau3AI GATC 6 cut(s) 106, 267, 420, 1095, 1413, 2052
Sau96I GGNCC 3 cut(s) 729, 1279, 1951
ScaI AGTACT 1 cut(s) 933
SchI GAGTC 6 cut(s) 218, 285, 779, 1004, 1129, 1505
ScrFI CCNGG 4 cut(s) 821, 1029, 1100, 1722
SduI GDGCHC 3 cut(s) 208, 1062, 1479
SfaNI GCATC 8 cut(s) 104, 714, 1023, 1057, 1141, 1397, 1439, 1792
SfcI CTRYAG 2 cut(s) 1176, 1809
SfoI GGCGCC 1 cut(s) 180
SgrAI CRCCGGYG 1 cut(s) 175
SinI GGWCC 2 cut(s) 1279, 1951
SmiMI CAYNNNNRTG 1 cut(s) 1365
SmlI CTYRAG 4 cut(s) 599, 1061, 1201, 1697
SmoI CTYRAG 4 cut(s) 599, 1061, 1201, 1697
Sse9I AATT 7 cut(s) 509, 869, 1078, 1182, 1196, 1751, 1831
SseBI AGGCCT 1 cut(s) 558
SsiI CCGC 3 cut(s) 1258, 1480, 1903
SspDI GGCGCC 1 cut(s) 178
SstI GAGCTC 1 cut(s) 1062
StuI AGGCCT 1 cut(s) 558
StyD4I CCNGG 4 cut(s) 819, 1027, 1098, 1720
StyI CCWWGG 5 cut(s) 110, 1531, 1557, 1615, 1995
TaaI ACNGT 9 cut(s) 365, 437, 592, 649, 839, 1346, 1829, 2024, 2029
TaiI ACGT 1 cut(s) 772
TaqI TCGA 7 cut(s) 195, 513, 534, 609, 1353, 1509, 1786
TaqII GACCGA 1 cut(s) 1939
TasI AATT 7 cut(s) 509, 869, 1078, 1182, 1196, 1751, 1831
TatI WGTACW 3 cut(s) 931, 1050, 2024
TauI GCSGC 1 cut(s) 1906
TfiI GAWTC 3 cut(s) 853, 1664, 1726
Tru1I TTAA 3 cut(s) 215, 252, 710
Tru9I TTAA 3 cut(s) 215, 252, 710
TscAI CASTG 3 cut(s) 452, 817, 1903
TseI GCWGC 5 cut(s) 101, 236, 485, 1154, 2013
TspRI CASTG 3 cut(s) 452, 817, 1903
Van91I CCANNNNNTGG 1 cut(s) 1471
VneI GTGCAC 1 cut(s) 1475
VpaK11BI GGWCC 2 cut(s) 1279, 1951
XapI RAATTY 2 cut(s) 509, 869
XbaI TCTAGA 1 cut(s) 856
XceI RCATGY 1 cut(s) 1881
XcmI CCANNNNNNNNNTGG 3 cut(s) 1096, 1934, 1983
XmaJI CCTAGG 2 cut(s) 110, 1615
XmiI GTMKAC 1 cut(s) 690
ZrmI AGTACT 1 cut(s) 933
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.