Rh7DG270600

L-type lectin-domain containing receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000688
Physical Location & Seq
Reverse (-)
29035806 .. 29057336
21531 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG270600.1

Sequence Viewer

Length: 2547 bp
ATGGTGATAAGTGGAAATGAAGCAGTAAAGGGGCAGACAAAGAAAGAGTTCTTTGCCTCTTTGGTAGACGTGGGAGTTTTGAGTAAAAACCCAGTAGTCGACCTATCTAGAGGAGAGAGGAGAAGAGAAAGATTGAGATCGAGATTATATGAAAAAGAAACAAGGAGGACTAGTAAAAAAGGAATATACAGCTGTATTCATGTGTTTGAACAAGCTGCGTTTTCAGGAAGTTCCCAGACTCTGGTCTCGACTGCTGTACTTGTAATTATGGCCCTGGAGTTACTAGCAGGGTCAGTATTTGGAGTGTTATATGATCGTGTTTCGCGAGCTGCGGACAGGAAATCAGAGTTCAGATACCTCCTCACTCATATGAAACGCACTCTAGAGTCTTTAACAGGACAGGCCAGATTCATTCGAGAGATACGGGAGTTTAATGATGAATTGAGTCTCCCCAACCATGACATAGCTGATCTTGAAACACAAATGATCGAAGGCGCACAACTCGTTGGCAGGATGTCCAGTTTTCGAATGTATAACTATTGCTGCATGGATGGTTGCCACGACAAACTTTATGAATTGAATAGGTCTCTTGATAGACTTTTAAACAATCTGCAGCTGCAGCAAGCAAGGGATGTGAAGGAGATCTTGAAATTGTCAAGGCAAAACCGTGATGATCTCGATGAAATGAAGGGTATGTTGAAGATGATATTGCAGCAGATCAATGATCCTGAAATGAAGGGTCTAGTGAAGAAGTTACTGGAGCAGAATGCGGGGGACTCGACCGAGAGGTCGACCTCGGCTTCTGCAAGTAATACAGAAAGAGAAGGGAGTGACGAAGCACAAGTGGAATCATTAGAAGGACTATTAGAAGCTGCATTTCAGGTTCTGTTTGATGTCGTTATAGAAGTGAAGGACAAGTCGACTTTGATGCTTGGACCAATTATTGGACATCTCAAATCCACGCTAGACTGCTTAAAGCCATTGATTGAAGATATATCACAGCATAACAACATGGCATTGGATCGCCCAAAGAAGGAACTAGAAACTTTTGGAATGCAAATGAAGAGTGGTGCGGAGCTGGTTCGCGAGTGCTCGGAGGTTCATAAATGGACCAGCAACGAAACATACAAATTCGCCAGCCAACTTTTTGAATTGGATGAGTCTCTTCAAAGGCACTTATGTGTACTAATAGTGCAGGTAGCGAGAGATGTGAAGGAGACCTCGGTTGTGTTAAGGAGTGTACGAGAGGTGGTGGAGAAAATTGAAGGGATAAGTGGTGTGGCAAAAAAACAACAACTTGCATTGGATATGGTGGAGGTGAATGAAATAAGGGATGTGAGGGAGACGACATTGGTTTCAGCAAGGAATGTAGAGGCAGAGTTGACAGTAGTGGATGGCGACGTACCTGAACAACCATCATTTACAGCTGGATTGGATGTTCCTTCGGAGGAATTGAGTATGTCTAGAAAGAAGAAAAACTCGAAGATGAAGCTTCTTAAGGATGGGTGTCAATGCTTGACCCGACGGTCATTCTACAAGAGGAAGAGGGCTAGGGCCAGGGGAAGGGACTCGAACAGGTTAGACGCTTTGAAGAGTCTTCCAGTGATGTTGAGGGAGTTCAGTTACAGGGAGCTAAAGAAAGCTACCAACAACTTTGACTTGAAGCACACTTTGGGTCAAGGTGGATCTGTGGTTTACAGAGGACTGCTGTCGAAGGAAAATCTTGAAGTGGCAGTGAAGAAGTGCTCCAGGCTAGAGATCAAGGGTAAAGAGGATTTCTTGGCTGACCTCACCATTATTTACCGGCTGCGCCACAAACATATTGTCCCATTGCTCGGTTGGTGTCGCCAAAAGAAGATGCTACTCATAGTCCACGAGTTCATGCCAAATGGCAGCTTAGACAACCACCTATTCTCCGGACCGGAAAATACAACCCTAGAATGGAACCAGAGGTACAAGATCATATCTGGAGTGGCTTCAGTCCTACATTACCTCCAGGAGTTCCGTTGCAAAGTAGTCCACAGAAATATCACGGCCAGCCACATAATGCTCGATTCCCACTTCAACGCGCGCCTTGGCAACTTCGGCCTGAGAAGCGCAGAACCGGCCGAAGGTGTGACGGGCACAATGGGATACATTGCCCCCGAGTGCTTCCACACTGGAGAGATGACCTGCGAGTCCGACGTGTACGGCTTCGGGGCGGTGGTTCTAGGAGTTGTTTGCGGTCAACGACCGTACACCAAAATCGGAGGGTTTCAGTTTTTGGTTGATTGGGTGTGGTCGTTGCATAGAGAAGGACGTGTGCTTGAGGCCGTGGATGAGAGGCTTGGAAATGAGTATGATGTTGAAGAAGCGCAAAGACTTCTGCTTCTTGGGCTGGTCTGCTCTCATCCCATTGCTTACGAGAGGCCTAAGAGCCAGACCATAGTCCAGGTTGTTTCCGGGTCTATTCCAGCGCCCAAAGTCTCGCCTTTTAAACCGGCTTTCGTGTGGCCGCCCTTGCCAGAAGGATCGGTAGCATTGCCAATCGACACTGGTAACACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase Pkinase_Tyr

Protein Analysis

848

Amino Acids

95.8

Weight (kDa)

8.18

Isoelectric Point (pI)

38.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 97 - 228 1.8e-16 Arabidopsis broad-spectrum mildew resistance protein RPW8
RPW8 PF05659 288 - 416 3.8e-21 Arabidopsis broad-spectrum mildew resistance protein RPW8
Pkinase PF00069 553 - 749 9.3e-29 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 554 - 753 8.5e-34 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000688)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09820 FvH4_2g17160 FvH4_2g17160
malus_domestica MD02G1107100.v1.1 MD02G1107300.v1.1 MD05G1144900.v1.1 MD10G1144700.v1.1 MD15G1226500.v1.1
prunus_persica Prupe.7G188700_v2.0.a1 Prupe.7G188700_v2.0.a1 Prupe.7G188700_v2.0.a1 Prupe.8G183000_v2.0.a1
pyrus_communis pycom05g14000 pycom10g12440 pycom15g20140
rosa_chinensis RchiOBHm_Chr2g0096621 RchiOBHm_Chr6g0281601 RchiOBHm_Chr6g0281651 RchiOBHm_Chr7g0212121
rosa_laevigata RLG00000002926 RLG00000002927 RLG00000002933 RLG00000008638 RLG00000012954 RLG00000012955 RLG00000016656
rosa_multiflora Rmu_co8091766.1_g000001 Rmu_co8287847.1_g000001 Rmu_co8297221.1_g000001 Rmu_co8485327.1_g000001 Rmu_co8512767.1_g000001 Rmu_sc0002316.1_g000041 Rmu_sc0003565.1_g000009 Rmu_sc0014556.1_g000004 Rmu_sc0027573.1_g000001 Rmu_sc0030028.1_g000001
rosa_roxburghii Rroxscaffold_1G00026540 Rroxscaffold_2G00145470 Rroxscaffold_3G00247100 Rroxscaffold_3G00247110 Rroxscaffold_3G00247120 Rroxscaffold_5G00362680 Rroxscaffold_5G00362710 Rroxscaffold_7G00186950
rosa_rugosa Rorug02G0059000 Rorug02G0059100 Rorug06G0142300 Rorug07G0131000 Rorug07G0131100
rosa_samantha Rh1DG155700 Rh2AG106500 Rh2AG171500 Rh2BG108800 Rh2BG178900 Rh2CG110600 Rh2CG176400 Rh2DG110100 Rh2DG177600 Rh4BG120600 Rh6BG258300 Rh6CG257100 Rh6DG249200 Rh6DG249300 Rh7AG264100 Rh7AG264200 Rh7BG257800 Rh7BG257900 Rh7BG258000 Rh7BG258100 Rh7CG280600 Rh7CG280700 Rh7DG270600
rosa_wichuraiana Rw2G008240 Rw6G022110 Rw7G022540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 787, 1525, 2176
Acc36I ACCTGC 2 cut(s) 1186, 2180
AccB7I CCANNNNNTGG 2 cut(s) 241, 944
AccI GTMKAC 4 cut(s) 66, 99, 791, 920
AccII CGCG 4 cut(s) 325, 1086, 2069, 2071
AccIII TCCGGA 1 cut(s) 1916
AciI CCGC 6 cut(s) 332, 770, 1073, 2201, 2223, 2495
AclWI GGATC 4 cut(s) 719, 1029, 1693, 2518
AcoI YGGCCR 3 cut(s) 2034, 2106, 2492
AcsI RAATTY 1 cut(s) 1130
AcuI CTGAAG 1 cut(s) 1962
AfaI GTAC 7 cut(s) 258, 1185, 1242, 1404, 1955, 2189, 2237
AfiI CCNNNNNNNGG 7 cut(s) 241, 944, 1033, 1563, 1835, 1941, 2111
AflII CTTAAG 1 cut(s) 1496
AflIII ACRYGT 2 cut(s) 2184, 2299
AhlI ACTAGT 1 cut(s) 170
AjiI CACGTC 3 cut(s) 70, 2185, 2300
AjnI CCWGG 5 cut(s) 273, 1556, 1748, 1995, 2430
AjuI GAANNNNNNNTTGG 2 cut(s) 1655, 1687
AleI CACNNNNGTG 1 cut(s) 1179
AloI GAACNNNNNNTCC 2 cut(s) 1422, 1454
Alw21I GWGCWC 2 cut(s) 1094, 1748
Alw26I GTCTC 7 cut(s) 250, 452, 591, 1167, 1211, 1337, 2470
AlwI GGATC 4 cut(s) 719, 1029, 1693, 2518
AlwNI CAGNNNCTG 2 cut(s) 241, 886
Ama87I CYCGRG 1 cut(s) 2144
Aor13HI TCCGGA 1 cut(s) 1916
AoxI GGCC 9 cut(s) 270, 402, 1554, 2034, 2086, 2106, 2310, 2408, 2492
ApoI RAATTY 1 cut(s) 1130
ArsI GACNNNNNNTTYG 2 cut(s) 1809, 1841
Asp700I GAANNNNTTC 1 cut(s) 47
AspLEI GCGC 7 cut(s) 497, 1812, 2071, 2073, 2099, 2356, 2458
AspS9I GGNCC 5 cut(s) 271, 935, 1110, 1554, 1919
AsuC2I CCSGG 1 cut(s) 2443
AsuHPI GGTGA 3 cut(s) 16, 1330, 1783
AsuII TTCGAA 1 cut(s) 526
AvaI CYCGRG 1 cut(s) 2144
AvaII GGWCC 3 cut(s) 935, 1110, 1919
BaeGI GKGCMC 1 cut(s) 2126
BaeI ACNNNNGTAYC 2 cut(s) 413, 446
BauI CACGAG 1 cut(s) 1874
BbsI GAAGAC 1 cut(s) 1589
Bbv12I GWGCWC 2 cut(s) 1094, 1748
BccI CCATC 4 cut(s) 545, 1388, 1423, 1496
BceAI ACGGC 3 cut(s) 2049, 2206, 2297
BcgI CGANNNNNNTGC 2 cut(s) 910, 944
BciT130I CCWGG 5 cut(s) 275, 1558, 1750, 1997, 2432
BciVI GTATCC 1 cut(s) 2126
BcnI CCSGG 1 cut(s) 2443
BcoDI GTCTC 7 cut(s) 250, 452, 591, 1167, 1211, 1337, 2470
BcuI ACTAGT 1 cut(s) 170
BfmI CTRYAG 2 cut(s) 611, 617
BfoI RGCGCY 1 cut(s) 2459
BfrI CTTAAG 1 cut(s) 1496
BfuAI ACCTGC 2 cut(s) 1186, 2180
BfuI GTATCC 1 cut(s) 2126
BglII AGATCT 1 cut(s) 642
Bme1390I CCNGG 6 cut(s) 275, 1558, 1750, 1997, 2432, 2443
Bme18I GGWCC 3 cut(s) 935, 1110, 1919
BmeT110I CYCGRG 1 cut(s) 2144
BmgBI CACGTC 3 cut(s) 70, 2185, 2300
BmgT120I GGNCC 5 cut(s) 271, 935, 1110, 1554, 1919
BmiI GGNNCC 1 cut(s) 1946
BmrFI CCNGG 6 cut(s) 275, 1558, 1750, 1997, 2432, 2443
BmrI ACTGGG 1 cut(s) 86
BmsI GCATC 2 cut(s) 918, 1848
BmuI ACTGGG 1 cut(s) 86
BoxI GACNNNNGTC 3 cut(s) 242, 1708, 2426
BpiI GAAGAC 1 cut(s) 1589
BpmI CTGGAG 6 cut(s) 296, 779, 1732, 1979, 1989, 2181
Bpu14I TTCGAA 1 cut(s) 526
BpuEI CTTGAG 1 cut(s) 2327
BpuMI CCSGG 1 cut(s) 2443
BsaBI GATNNNNATC 1 cut(s) 136
BsaI GGTCTC 3 cut(s) 250, 591, 1211
BsaJI CCNNGG 6 cut(s) 273, 795, 1221, 1557, 2074, 2313
BsaWI WCCGGW 2 cut(s) 1916, 1921
BsaXI ACNNNNNCTCC 6 cut(s) 157, 187, 1898, 1928, 1977, 2007
Bsc4I CCNNNNNNNGG 7 cut(s) 241, 944, 1033, 1563, 1835, 1941, 2111
Bse118I RCCGGY 3 cut(s) 1803, 2104, 2479
Bse1I ACTGG 6 cut(s) 92, 519, 762, 1601, 2164, 2539
Bse3DI GCAATG 4 cut(s) 1829, 2136, 2394, 2519
Bse8I GATNNNNATC 1 cut(s) 136
BseAI TCCGGA 1 cut(s) 1916
BseBI CCWGG 5 cut(s) 275, 1558, 1750, 1997, 2432
BseDI CCNNGG 6 cut(s) 273, 795, 1221, 1557, 2074, 2313
BseJI GATNNNNATC 1 cut(s) 136
BseLI CCNNNNNNNGG 7 cut(s) 241, 944, 1033, 1563, 1835, 1941, 2111
BseMI GCAATG 4 cut(s) 1829, 2136, 2394, 2519
BseMII CTCAG 1 cut(s) 2081
BseNI ACTGG 6 cut(s) 92, 519, 762, 1601, 2164, 2539
BsePI GCGCGC 1 cut(s) 2069
BseRI GAGGAG 3 cut(s) 126, 133, 350
BseSI GKGCMC 1 cut(s) 2126
BseX3I CGGCCG 1 cut(s) 2106
BsgI GTGCAG 1 cut(s) 1214
Bsh1236I CGCG 4 cut(s) 325, 1086, 2069, 2071
Bsh1285I CGRYCG 3 cut(s) 783, 2109, 2234
BshFI GGCC 9 cut(s) 272, 404, 1556, 2036, 2088, 2108, 2312, 2410, 2494
BsiEI CGRYCG 3 cut(s) 783, 2109, 2234
BsiHKAI GWGCWC 2 cut(s) 1094, 1748
BsiHKCI CYCGRG 1 cut(s) 2144
BsiSI CCGG 6 cut(s) 1804, 1917, 1922, 2105, 2442, 2480
BslFI GGGAC 3 cut(s) 788, 1580, 1811
BslI CCNNNNNNNGG 7 cut(s) 241, 944, 1033, 1563, 1835, 1941, 2111
BsmAI GTCTC 7 cut(s) 250, 452, 591, 1167, 1211, 1337, 2470
BsmBI CGTCTC 1 cut(s) 1337
BsmFI GGGAC 3 cut(s) 788, 1580, 1811
BsmI GAATGC 2 cut(s) 772, 1059
BsnI GGCC 9 cut(s) 272, 404, 1556, 2036, 2088, 2108, 2312, 2410, 2494
Bso31I GGTCTC 3 cut(s) 250, 591, 1211
BsoBI CYCGRG 1 cut(s) 2144
Bsp119I TTCGAA 1 cut(s) 526
Bsp1286I GDGCHC 3 cut(s) 1094, 1748, 2126
Bsp13I TCCGGA 1 cut(s) 1916
Bsp68I TCGCGA 2 cut(s) 325, 1086
BspACI CCGC 6 cut(s) 332, 770, 1073, 2201, 2223, 2495
BspANI GGCC 9 cut(s) 272, 404, 1556, 2036, 2088, 2108, 2312, 2410, 2494
BspCNI CTCAG 1 cut(s) 2082
BspEI TCCGGA 1 cut(s) 1916
BspFNI CGCG 4 cut(s) 325, 1086, 2069, 2071
BspLI GGNNCC 1 cut(s) 1946
BspMAI CTGCAG 2 cut(s) 615, 621
BspMI ACCTGC 2 cut(s) 1186, 2180
BspPI GGATC 4 cut(s) 719, 1029, 1693, 2518
BspT104I TTCGAA 1 cut(s) 526
BspTI CTTAAG 1 cut(s) 1496
BspTNI GGTCTC 3 cut(s) 250, 591, 1211
BsrDI GCAATG 4 cut(s) 1829, 2136, 2394, 2519
BsrFI RCCGGY 3 cut(s) 1803, 2104, 2479
BsrI ACTGG 6 cut(s) 92, 519, 762, 1601, 2164, 2539
BssAI RCCGGY 3 cut(s) 1803, 2104, 2479
BssECI CCNNGG 6 cut(s) 273, 795, 1221, 1557, 2074, 2313
BssHII GCGCGC 1 cut(s) 2069
BssSI CACGAG 1 cut(s) 1874
BssT1I CCWWGG 1 cut(s) 2074
Bst2BI CACGAG 1 cut(s) 1874
Bst2UI CCWGG 5 cut(s) 275, 1558, 1750, 1997, 2432
Bst4CI ACNGT 4 cut(s) 668, 1387, 1527, 2235
Bst6I CTCTTC 5 cut(s) 118, 1058, 1170, 1538, 1586
BstAFI CTTAAG 1 cut(s) 1496
BstBI TTCGAA 1 cut(s) 526
BstC8I GCNNGC 5 cut(s) 327, 624, 1138, 2038, 2071
BstDEI CTNAG 3 cut(s) 1897, 2090, 2412
BstDSI CCRYGG 1 cut(s) 2313
BstFNI CGCG 4 cut(s) 325, 1086, 2069, 2071
BstH2I RGCGCY 1 cut(s) 2459
BstHHI GCGC 7 cut(s) 497, 1812, 2071, 2073, 2099, 2356, 2458
BstMAI GTCTC 7 cut(s) 250, 452, 591, 1167, 1211, 1337, 2470
BstMCI CGRYCG 3 cut(s) 783, 2109, 2234
BstMWI GCNNNNNNNGC 6 cut(s) 619, 2085, 2094, 2105, 2374, 2500
BstNI CCWGG 5 cut(s) 275, 1558, 1750, 1997, 2432
BstPAI GACNNNNGTC 3 cut(s) 242, 1708, 2426
BstSCI CCNGG 6 cut(s) 273, 1556, 1748, 1995, 2430, 2441
BstSFI CTRYAG 2 cut(s) 611, 617
BstSLI GKGCMC 1 cut(s) 2126
BstUI CGCG 4 cut(s) 325, 1086, 2069, 2071
BstV2I GAAGAC 1 cut(s) 1589
BstX2I RGATCY 2 cut(s) 642, 1685
BstYI RGATCY 2 cut(s) 642, 1685
BstZI CGGCCG 1 cut(s) 2106
BsuI GTATCC 1 cut(s) 2126
BsuRI GGCC 9 cut(s) 272, 404, 1556, 2036, 2088, 2108, 2312, 2410, 2494
BtgI CCRYGG 1 cut(s) 2313
BtrI CACGTC 3 cut(s) 70, 2185, 2300
BtsI GCAGTG 1 cut(s) 1740
BtsIMutI CAGTG 4 cut(s) 1608, 1740, 2157, 2532
BtuMI TCGCGA 2 cut(s) 325, 1086
BveI ACCTGC 2 cut(s) 1186, 2180
Cac8I GCNNGC 5 cut(s) 327, 624, 1138, 2038, 2071
CaiI CAGNNNCTG 2 cut(s) 241, 886
CfoI GCGC 7 cut(s) 497, 1812, 2071, 2073, 2099, 2356, 2458
Cfr10I RCCGGY 3 cut(s) 1803, 2104, 2479
Cfr13I GGNCC 5 cut(s) 271, 935, 1110, 1554, 1919
CpoI CGGWCCG 1 cut(s) 1919
CseI GACGC 1 cut(s) 1592
Csp6I GTAC 7 cut(s) 257, 1184, 1241, 1403, 1954, 2188, 2236
CspI CGGWCCG 1 cut(s) 1919
CviAII CATG 5 cut(s) 200, 458, 547, 1012, 1882
CviQI GTAC 7 cut(s) 257, 1184, 1241, 1403, 1954, 2188, 2236
DdeI CTNAG 3 cut(s) 1897, 2090, 2412
DraI TTTAAA 2 cut(s) 603, 2476
DrdI GACNNNNNNGTC 3 cut(s) 787, 1525, 2176
DseDI GACNNNNNNGTC 3 cut(s) 787, 1525, 2176
EaeI YGGCCR 3 cut(s) 2034, 2106, 2492
EagI CGGCCG 1 cut(s) 2106
Eam1104I CTCTTC 5 cut(s) 118, 1058, 1170, 1538, 1586
EarI CTCTTC 5 cut(s) 118, 1058, 1170, 1538, 1586
EclXI CGGCCG 1 cut(s) 2106
Eco130I CCWWGG 1 cut(s) 2074
Eco147I AGGCCT 1 cut(s) 2410
Eco31I GGTCTC 3 cut(s) 250, 591, 1211
Eco47I GGWCC 3 cut(s) 935, 1110, 1919
Eco52I CGGCCG 1 cut(s) 2106
Eco57I CTGAAG 1 cut(s) 1962
Eco88I CYCGRG 1 cut(s) 2144
EcoRII CCWGG 5 cut(s) 273, 1556, 1748, 1995, 2430
EcoT14I CCWWGG 1 cut(s) 2074
ErhI CCWWGG 1 cut(s) 2074
Esp3I CGTCTC 1 cut(s) 1337
FaeI CATG 5 cut(s) 203, 461, 550, 1015, 1885
FalI AAGNNNNNCTT 2 cut(s) 629, 661
FaqI GGGAC 3 cut(s) 788, 1580, 1811
FatI CATG 5 cut(s) 199, 457, 546, 1011, 1881
FauI CCCGC 1 cut(s) 763
FauNDI CATATG 1 cut(s) 369
FblI GTMKAC 4 cut(s) 66, 99, 791, 920
GlaI GCGC 7 cut(s) 496, 1811, 2070, 2072, 2098, 2355, 2457
GsuI CTGGAG 6 cut(s) 296, 779, 1732, 1979, 1989, 2181
HaeII RGCGCY 1 cut(s) 2459
HaeIII GGCC 9 cut(s) 272, 404, 1556, 2036, 2088, 2108, 2312, 2410, 2494
HapII CCGG 6 cut(s) 1804, 1917, 1922, 2105, 2442, 2480
HgaI GACGC 1 cut(s) 1592
HhaI GCGC 7 cut(s) 497, 1812, 2071, 2073, 2099, 2356, 2458
Hin1II CATG 5 cut(s) 203, 461, 550, 1015, 1885
Hin6I GCGC 7 cut(s) 495, 1810, 2069, 2071, 2097, 2354, 2456
HinP1I GCGC 7 cut(s) 495, 1810, 2069, 2071, 2097, 2354, 2456
HincII GTYRAC 5 cut(s) 100, 792, 921, 1383, 2228
HindII GTYRAC 5 cut(s) 100, 792, 921, 1383, 2228
HindIII AAGCTT 1 cut(s) 1490
HpaII CCGG 6 cut(s) 1804, 1917, 1922, 2105, 2442, 2480
HphI GGTGA 3 cut(s) 16, 1330, 1783
Hpy188I TCNGA 6 cut(s) 346, 353, 1096, 1447, 2182, 2249
Hpy99I CGWCG 3 cut(s) 1403, 1527, 2186
HpyCH4III ACNGT 4 cut(s) 668, 1387, 1527, 2235
HpyCH4IV ACGT 4 cut(s) 69, 1401, 2184, 2299
HpyF10VI GCNNNNNNNGC 6 cut(s) 619, 2085, 2094, 2105, 2374, 2500
HpyF3I CTNAG 3 cut(s) 1897, 2090, 2412
HpySE526I ACGT 4 cut(s) 69, 1401, 2184, 2299
Hsp92II CATG 5 cut(s) 203, 461, 550, 1015, 1885
HspAI GCGC 7 cut(s) 495, 1810, 2069, 2071, 2097, 2354, 2456
Kpn2I TCCGGA 1 cut(s) 1916
LmnI GCTCC 4 cut(s) 760, 1075, 1630, 1751
LweI GCATC 2 cut(s) 918, 1848
MaeII ACGT 4 cut(s) 69, 1401, 2184, 2299
MaeIII GTNAC 6 cut(s) 279, 753, 830, 1622, 2116, 2537
MflI RGATCY 2 cut(s) 642, 1685
MhlI GDGCHC 3 cut(s) 1094, 1748, 2126
MluCI AATT 9 cut(s) 264, 440, 575, 650, 939, 1130, 1151, 1260, 1451
MlyI GAGTC 8 cut(s) 232, 395, 454, 770, 1169, 1562, 1603, 2186
MmeI TCCRAC 1 cut(s) 2205
MroI TCCGGA 1 cut(s) 1916
MroXI GAANNNNTTC 1 cut(s) 47
MseI TTAA 7 cut(s) 392, 432, 602, 974, 1232, 1497, 2475
MslI CAYNNNNRTG 2 cut(s) 368, 1179
MspA1I CMGCKG 3 cut(s) 192, 616, 1427
MspCI CTTAAG 1 cut(s) 1496
MspI CCGG 6 cut(s) 1804, 1917, 1922, 2105, 2442, 2480
MspR9I CCNGG 6 cut(s) 275, 1558, 1750, 1997, 2432, 2443
Mva1269I GAATGC 2 cut(s) 772, 1059
MvaI CCWGG 5 cut(s) 275, 1558, 1750, 1997, 2432
MvnI CGCG 4 cut(s) 325, 1086, 2069, 2071
MwoI GCNNNNNNNGC 6 cut(s) 619, 2085, 2094, 2105, 2374, 2500
NciI CCSGG 1 cut(s) 2443
NdeI CATATG 1 cut(s) 369
NlaIII CATG 5 cut(s) 203, 461, 550, 1015, 1885
NlaIV GGNNCC 1 cut(s) 1946
NmeAIII GCCGAG 1 cut(s) 776
NmuCI GTSAC 2 cut(s) 830, 2116
NruI TCGCGA 2 cut(s) 325, 1086
NspV TTCGAA 1 cut(s) 526
OliI CACNNNNGTG 1 cut(s) 1179
PauI GCGCGC 1 cut(s) 2069
PceI AGGCCT 1 cut(s) 2410
PcsI WCGNNNNNNNCGW 1 cut(s) 322
PctI GAATGC 2 cut(s) 772, 1059
PdmI GAANNNNTTC 1 cut(s) 47
PfeI GAWTC 3 cut(s) 408, 848, 2054
PflMI CCANNNNNTGG 2 cut(s) 241, 944
PfoI TCCNGGA 1 cut(s) 1995
PleI GAGTC 8 cut(s) 232, 394, 453, 770, 1168, 1562, 1602, 2185
PpsI GAGTC 8 cut(s) 232, 394, 453, 770, 1168, 1562, 1602, 2185
PshAI GACNNNNGTC 3 cut(s) 242, 1708, 2426
Psp6I CCWGG 5 cut(s) 273, 1556, 1748, 1995, 2430
PspGI CCWGG 5 cut(s) 273, 1556, 1748, 1995, 2430
PspN4I GGNNCC 1 cut(s) 1946
PspPI GGNCC 5 cut(s) 271, 935, 1110, 1554, 1919
PsrI GAACNNNNNNTAC 2 cut(s) 1937, 1969
PstI CTGCAG 2 cut(s) 615, 621
PstNI CAGNNNCTG 2 cut(s) 241, 886
PsuI RGATCY 2 cut(s) 642, 1685
PteI GCGCGC 1 cut(s) 2069
PvuII CAGCTG 3 cut(s) 192, 616, 1427
RruI TCGCGA 2 cut(s) 325, 1086
RsaI GTAC 7 cut(s) 258, 1185, 1242, 1404, 1955, 2189, 2237
RsaNI GTAC 7 cut(s) 257, 1184, 1241, 1403, 1954, 2188, 2236
RseI CAYNNNNRTG 2 cut(s) 368, 1179
Rsr2I CGGWCCG 1 cut(s) 1919
RsrII CGGWCCG 1 cut(s) 1919
SalI GTCGAC 3 cut(s) 98, 790, 919
SaqAI TTAA 7 cut(s) 392, 432, 602, 974, 1232, 1497, 2475
Sau96I GGNCC 5 cut(s) 271, 935, 1110, 1554, 1919
SchI GAGTC 8 cut(s) 232, 395, 454, 770, 1169, 1562, 1603, 2186
ScrFI CCNGG 6 cut(s) 275, 1558, 1750, 1997, 2432, 2443
SduI GDGCHC 3 cut(s) 1094, 1748, 2126
SfaNI GCATC 2 cut(s) 918, 1848
SfcI CTRYAG 2 cut(s) 611, 617
SfuI TTCGAA 1 cut(s) 526
SinI GGWCC 3 cut(s) 935, 1110, 1919
SmiMI CAYNNNNRTG 2 cut(s) 368, 1179
SmlI CTYRAG 2 cut(s) 1496, 2306
SmoI CTYRAG 2 cut(s) 1496, 2306
SpeI ACTAGT 1 cut(s) 170
Sse9I AATT 9 cut(s) 264, 440, 575, 650, 939, 1130, 1151, 1260, 1451
SseBI AGGCCT 1 cut(s) 2410
SsiI CCGC 6 cut(s) 332, 770, 1073, 2201, 2223, 2495
StuI AGGCCT 1 cut(s) 2410
StyD4I CCNGG 6 cut(s) 273, 1556, 1748, 1995, 2430, 2441
StyI CCWWGG 1 cut(s) 2074
TaaI ACNGT 4 cut(s) 668, 1387, 1527, 2235
TaiI ACGT 4 cut(s) 72, 1404, 2187, 2302
TaqII GACCGA 1 cut(s) 797
TasI AATT 9 cut(s) 264, 440, 575, 650, 939, 1130, 1151, 1260, 1451
TatI WGTACW 2 cut(s) 256, 1183
TauI GCSGC 1 cut(s) 2497
TfiI GAWTC 3 cut(s) 408, 848, 2054
Tru1I TTAA 7 cut(s) 392, 432, 602, 974, 1232, 1497, 2475
Tru9I TTAA 7 cut(s) 392, 432, 602, 974, 1232, 1497, 2475
TscAI CASTG 4 cut(s) 1608, 1740, 2164, 2539
TseFI GTSAC 2 cut(s) 830, 2116
Tsp45I GTSAC 2 cut(s) 830, 2116
TspGWI ACGGA 1 cut(s) 1994
TspRI CASTG 4 cut(s) 1608, 1740, 2164, 2539
Van91I CCANNNNNTGG 2 cut(s) 241, 944
Vha464I CTTAAG 1 cut(s) 1496
VpaK11BI GGWCC 3 cut(s) 935, 1110, 1919
XapI RAATTY 1 cut(s) 1130
XbaI TCTAGA 3 cut(s) 107, 382, 1463
XcmI CCANNNNNNNNNTGG 1 cut(s) 1836
XmiI GTMKAC 4 cut(s) 66, 99, 791, 920
XmnI GAANNNNTTC 1 cut(s) 47
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.