Rroxscaffold_3G00247120

L-type lectin-domain containing receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000688
Physical Location & Seq
Forward (+)
40429335 .. 40433812
4478 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00247120.1

Sequence Viewer

Length: 2142 bp
ATGATCGAAGGCACACAACTCGTTGGCAGGATGTCCAGTTTTCGAATGTACAACTATTGCTGCATGGACGGTTGCCACGACCAACTTTATGAATTGAATAGGTCTCTTGATAGACTTTTAAACAATCTGCAGCTGCAGCAAGCAAGGGATGTGAAGGAGATCTTGAAATTGTCAAGGCAAAACCGTGATGATCTTGATGAAATGAAGGGTATGTTGAAGATGATACTGCAGCAGATCAATGATCCTGAAATGAAGGGTCTAGTGAAGAAGTTCCTGGAGCAGAATGCAGGGGACTCGACCGAGAGGTCGACCTCGGCTTCTGCAAGTAATACAGAAAGAGAAGGGAGTGACGAAGCACAAGTGAAAGGAAAGAAGAAAGGGAAAAAAAAGACACATTCTGATTTTGGTGTTGTAATGACAGTGGAATCATTAGAAGGACTATTAGAAGCTGCATTTCAGGTTCTGTTTGATGTCGTTATAGAAGTGAAGGACAAGTCGACTTTGATGCTTGGACCAATTATTGGACATCTCAAATCCACGCTAGACTGCTTAAATCCATTGATTGAAGATATATCACAGCATAACAGCAAGGCATTGGATCGCCCAAAGAAGGAACTAGAAACTTTTGGAATGCAAATGAAGAGTGGTGTAGAGCTGGTTCGCGAGTGCTCAGAGGTTCATAAATGGACCAGCAACGAAACCTACAAATACGCCAGCCAACTTTTTGAATTGGATGAGTCTCTTCAAAGGCACTTATGTGTACTAATAGTGCAGGTAGCGAGAGATGTGAAGGAGACCTCGGTTGTGCTAAGTAGTGTACGAGAGGTGGTGGAGAAAATTGAAGGGATAAGTGGTGTGGCAAAAAAACAACAACTTGCATTGGATATGGTGGAGGTGAATGAAATAAGGGATGTGAGGGAGACGACATTGGTTTCAGCAAGGAATGTAGAGGCAGAGTTGACAGTAGTGGATGGCGACGTACCTGAACAGCCATCATTTACTGCTGGATTGGATGTTCCTTCGGAGGAATTGAGTATGTCTAGAAAGAAGAAAAACTCGAAGATGAAGCTTCTTAAGGATGGGTGTCAATGCTTGACCCGACGGTCATTCTACAAGAGGAAGAGGGCTAGGGCCAGGGGAAGGGACTCGAACAGGTTAGACGCTTTGAAGAGTCTTCCGGTGATGTTGAGGGAGTTCAGTTACAGGGAGCTAAAGAAAGCTACTAACAACTTTGACTTGAAGCACACTTTGGGTCAAGGTGGCGGATCTGTGGTTTACAGAGGATTGCTGTCGAAGGAAAATCTTGAAGTGGCAGTGAAGAAGTGCTCCAGGCTAGAGATCAAGGGTAAAGAGGATTTCTTGGCTGACCTCACCATTATTTACCGGCTGCGCCACAAACATATTGTCCCATTGCTCGGTTGGTGTCGCCAAAAGAAGATGCTACTCATAGTCCACGAGTTCATGCCAAATGGCAGCTTAGACAACCACCTATTCTCCGGACCGGAAAATACAACCCTAGGATGGAACCAGAGGTACAAGATCATATCTGGAGTGGCTTCAGTCCTACATTACCTCCAGGAGTTCCGTTGCAAAGTAGTCCACAGAAATATCACGGCCAGCAACATAATGCTCGATTCCCACTTCAACGCGCGCCTTGGCGACTTCAGCCTGAGAAGCGCAGCGCTCGAAGGTGTGGCGGGCACAATGGGATACATTGCCCCCGAGTGCTTCCACACTGGAGAGATGACCTGCGAGTCCGACGTGTACAGCTTCGGGGCGGTGGTTCTAGCAGTTGTTTGCGGTCAACGACCGTACACCAAAATCGGAGGGTTTCAGGTTTTGGTTGATTGGGTGTGGTCGTTGCATAGAGAAGGACGTGTGCTTGAGGCCGTGGATGAGAGGCTTGGAAATGAGTATGATGTTGAAGAAGCGCATAGACTTCTGCTTCTTGGGCTGGCCTGCTCTCATCCCATTGCTCACGAGAGGCCTAAGAGCCAGACCATAGTCCAGGTAGTTTCCGGGTCTAATCCAGCGCCCAAAGTCTCGCCTTTTAAACCTGCTTTCGAGTGGCCGGCCACGCGAAATAAACGAGTGGCCGGCCACGCCGAAAGCATAGGGTGGCAGGCCACGCCGAAAGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase Pkinase_Tyr

Protein Analysis

713

Amino Acids

80.31

Weight (kDa)

8.61

Isoelectric Point (pI)

40.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 147 - 276 1.5e-22 Arabidopsis broad-spectrum mildew resistance protein RPW8
Pkinase PF00069 412 - 610 2.2e-33 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 413 - 614 2.6e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000688)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09820 FvH4_2g17160 FvH4_2g17160
malus_domestica MD02G1107100.v1.1 MD02G1107300.v1.1 MD05G1144900.v1.1 MD10G1144700.v1.1 MD15G1226500.v1.1
prunus_persica Prupe.7G188700_v2.0.a1 Prupe.7G188700_v2.0.a1 Prupe.7G188700_v2.0.a1 Prupe.8G183000_v2.0.a1
pyrus_communis pycom05g14000 pycom10g12440 pycom15g20140
rosa_chinensis RchiOBHm_Chr2g0096621 RchiOBHm_Chr6g0281601 RchiOBHm_Chr6g0281651 RchiOBHm_Chr7g0212121
rosa_laevigata RLG00000002926 RLG00000002927 RLG00000002933 RLG00000008638 RLG00000012954 RLG00000012955 RLG00000016656
rosa_multiflora Rmu_co8091766.1_g000001 Rmu_co8287847.1_g000001 Rmu_co8297221.1_g000001 Rmu_co8485327.1_g000001 Rmu_co8512767.1_g000001 Rmu_sc0002316.1_g000041 Rmu_sc0003565.1_g000009 Rmu_sc0014556.1_g000004 Rmu_sc0027573.1_g000001 Rmu_sc0030028.1_g000001
rosa_roxburghii Rroxscaffold_1G00026540 Rroxscaffold_2G00145470 Rroxscaffold_3G00247100 Rroxscaffold_3G00247110 Rroxscaffold_3G00247120 Rroxscaffold_5G00362680 Rroxscaffold_5G00362710 Rroxscaffold_7G00186950
rosa_rugosa Rorug02G0059000 Rorug02G0059100 Rorug06G0142300 Rorug07G0131000 Rorug07G0131100
rosa_samantha Rh1DG155700 Rh2AG106500 Rh2AG171500 Rh2BG108800 Rh2BG178900 Rh2CG110600 Rh2CG176400 Rh2DG110100 Rh2DG177600 Rh4BG120600 Rh6BG258300 Rh6CG257100 Rh6DG249200 Rh6DG249300 Rh7AG264100 Rh7AG264200 Rh7BG257800 Rh7BG257900 Rh7BG258000 Rh7BG258100 Rh7CG280600 Rh7CG280700 Rh7DG270600
rosa_wichuraiana Rw2G008240 Rw6G022110 Rw7G022540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 304, 1102, 1753
Acc36I ACCTGC 3 cut(s) 763, 1757, 2065
AccB7I CCANNNNNTGG 1 cut(s) 521
AccI GTMKAC 2 cut(s) 308, 497
AccII CGCG 4 cut(s) 663, 1649, 1651, 2080
AccIII TCCGGA 1 cut(s) 1496
AciI CCGC 4 cut(s) 1263, 1697, 1778, 1800
AclWI GGATC 3 cut(s) 236, 606, 1273
AcoI YGGCCR 5 cut(s) 1614, 2069, 2073, 2094, 2098
AcuI CTGAAG 2 cut(s) 1542, 1648
AfaI GTAC 7 cut(s) 50, 762, 819, 981, 1535, 1766, 1814
AfeI AGCGCT 1 cut(s) 1683
AfiI CCNNNNNNNGG 5 cut(s) 521, 610, 1140, 1415, 1521
AflII CTTAAG 1 cut(s) 1073
AflIII ACRYGT 2 cut(s) 1761, 1876
AjiI CACGTC 2 cut(s) 1762, 1877
AjnI CCWGG 5 cut(s) 273, 1133, 1328, 1575, 2007
AjuI GAANNNNNNNTTGG 2 cut(s) 1232, 1264
AleI CACNNNNGTG 1 cut(s) 756
AloI GAACNNNNNNTCC 2 cut(s) 999, 1031
AluBI AGCT 8 cut(s) 133, 449, 655, 1069, 1210, 1220, 1476, 1770
AluI AGCT 8 cut(s) 133, 449, 655, 1069, 1210, 1220, 1476, 1770
Alw21I GWGCWC 2 cut(s) 671, 1328
Alw26I GTCTC 5 cut(s) 108, 744, 788, 914, 2047
AlwI GGATC 3 cut(s) 236, 606, 1273
AlwNI CAGNNNCTG 1 cut(s) 463
Ama87I CYCGRG 1 cut(s) 1721
Aor13HI TCCGGA 1 cut(s) 1496
Aor51HI AGCGCT 1 cut(s) 1683
ApeKI GCWGC 9 cut(s) 60, 130, 133, 136, 229, 449, 1387, 1473, 1679
ArsI GACNNNNNNTTYG 2 cut(s) 1389, 1421
Asp700I GAANNNNTTC 1 cut(s) 269
AspA2I CCTAGG 1 cut(s) 1516
AspLEI GCGC 7 cut(s) 1392, 1651, 1653, 1679, 1684, 1933, 2035
AspS9I GGNCC 4 cut(s) 512, 687, 1131, 1499
AsuC2I CCSGG 1 cut(s) 2020
AsuHPI GGTGA 3 cut(s) 907, 1192, 1363
AsuII TTCGAA 1 cut(s) 43
AvaI CYCGRG 1 cut(s) 1721
AvaII GGWCC 3 cut(s) 512, 687, 1499
AvrII CCTAGG 1 cut(s) 1516
BaeGI GKGCMC 1 cut(s) 1703
BauI CACGAG 2 cut(s) 1454, 1979
BbsI GAAGAC 1 cut(s) 1166
Bbv12I GWGCWC 2 cut(s) 671, 1328
BbvI GCAGC 9 cut(s) 47, 120, 142, 148, 241, 436, 1374, 1485, 1691
BccI CCATC 4 cut(s) 965, 1000, 1073, 1515
BceAI ACGGC 2 cut(s) 1629, 1874
BcgI CGANNNNNNTGC 5 cut(s) 35, 276, 310, 487, 521
BciT130I CCWGG 5 cut(s) 275, 1135, 1330, 1577, 2009
BciVI GTATCC 1 cut(s) 1703
BcnI CCSGG 1 cut(s) 2020
BcoDI GTCTC 5 cut(s) 108, 744, 788, 914, 2047
BfaI CTAG 8 cut(s) 260, 542, 617, 1041, 1128, 1334, 1517, 1787
BfmI CTRYAG 3 cut(s) 128, 134, 227
BfoI RGCGCY 2 cut(s) 1685, 2036
BfrI CTTAAG 1 cut(s) 1073
BfuAI ACCTGC 3 cut(s) 763, 1757, 2065
BfuI GTATCC 1 cut(s) 1703
BglII AGATCT 1 cut(s) 159
BisI GCNGC 9 cut(s) 61, 131, 134, 137, 230, 450, 1388, 1474, 1680
BlnI CCTAGG 1 cut(s) 1516
BlsI GCNGC 9 cut(s) 62, 132, 135, 138, 231, 451, 1389, 1475, 1681
Bme1390I CCNGG 6 cut(s) 275, 1135, 1330, 1577, 2009, 2020
Bme18I GGWCC 3 cut(s) 512, 687, 1499
BmeT110I CYCGRG 1 cut(s) 1721
BmgBI CACGTC 2 cut(s) 1762, 1877
BmgT120I GGNCC 4 cut(s) 512, 687, 1131, 1499
BmiI GGNNCC 1 cut(s) 1526
BmrFI CCNGG 6 cut(s) 275, 1135, 1330, 1577, 2009, 2020
BmsI GCATC 2 cut(s) 495, 1428
BoxI GACNNNNGTC 1 cut(s) 2003
BpiI GAAGAC 1 cut(s) 1166
BpmI CTGGAG 5 cut(s) 296, 1312, 1559, 1569, 1758
Bpu14I TTCGAA 1 cut(s) 43
BpuEI CTTGAG 1 cut(s) 1904
BpuMI CCSGG 1 cut(s) 2020
BsaI GGTCTC 2 cut(s) 108, 788
BsaJI CCNNGG 6 cut(s) 312, 798, 1134, 1516, 1654, 1890
BsaWI WCCGGW 3 cut(s) 1177, 1496, 1501
BsaXI ACNNNNNCTCC 4 cut(s) 1478, 1508, 1557, 1587
Bsc4I CCNNNNNNNGG 5 cut(s) 521, 610, 1140, 1415, 1521
Bse118I RCCGGY 3 cut(s) 1383, 2071, 2096
Bse1I ACTGG 2 cut(s) 36, 1741
Bse3DI GCAATG 3 cut(s) 1409, 1713, 1971
BseAI TCCGGA 1 cut(s) 1496
BseBI CCWGG 5 cut(s) 275, 1135, 1330, 1577, 2009
BseDI CCNNGG 6 cut(s) 312, 798, 1134, 1516, 1654, 1890
BseLI CCNNNNNNNGG 5 cut(s) 521, 610, 1140, 1415, 1521
BseMI GCAATG 3 cut(s) 1409, 1713, 1971
BseMII CTCAG 2 cut(s) 684, 1661
BseNI ACTGG 2 cut(s) 36, 1741
BsePI GCGCGC 1 cut(s) 1649
BseSI GKGCMC 1 cut(s) 1703
BseXI GCAGC 9 cut(s) 47, 120, 142, 148, 241, 436, 1374, 1485, 1691
BsgI GTGCAG 1 cut(s) 791
Bsh1236I CGCG 4 cut(s) 663, 1649, 1651, 2080
Bsh1285I CGRYCG 2 cut(s) 300, 1811
BsiEI CGRYCG 2 cut(s) 300, 1811
BsiHKAI GWGCWC 2 cut(s) 671, 1328
BsiHKCI CYCGRG 1 cut(s) 1721
BsiSI CCGG 7 cut(s) 1178, 1384, 1497, 1502, 2019, 2072, 2097
BslFI GGGAC 3 cut(s) 305, 1157, 1391
BslI CCNNNNNNNGG 5 cut(s) 521, 610, 1140, 1415, 1521
BsmAI GTCTC 5 cut(s) 108, 744, 788, 914, 2047
BsmBI CGTCTC 1 cut(s) 914
BsmFI GGGAC 3 cut(s) 305, 1157, 1391
BsmI GAATGC 2 cut(s) 289, 636
Bso31I GGTCTC 2 cut(s) 108, 788
BsoBI CYCGRG 1 cut(s) 1721
Bsp119I TTCGAA 1 cut(s) 43
Bsp1286I GDGCHC 3 cut(s) 671, 1328, 1703
Bsp13I TCCGGA 1 cut(s) 1496
Bsp1407I TGTACA 2 cut(s) 48, 1764
Bsp143I GATC 9 cut(s) 3, 159, 190, 234, 241, 598, 1265, 1338, 1539
Bsp68I TCGCGA 1 cut(s) 663
BspACI CCGC 4 cut(s) 1263, 1697, 1778, 1800
BspCNI CTCAG 2 cut(s) 683, 1662
BspEI TCCGGA 1 cut(s) 1496
BspFNI CGCG 4 cut(s) 663, 1649, 1651, 2080
BspLI GGNNCC 1 cut(s) 1526
BspMAI CTGCAG 3 cut(s) 132, 138, 231
BspMI ACCTGC 3 cut(s) 763, 1757, 2065
BspPI GGATC 3 cut(s) 236, 606, 1273
BspT104I TTCGAA 1 cut(s) 43
BspTI CTTAAG 1 cut(s) 1073
BspTNI GGTCTC 2 cut(s) 108, 788
BsrDI GCAATG 3 cut(s) 1409, 1713, 1971
BsrFI RCCGGY 3 cut(s) 1383, 2071, 2096
BsrGI TGTACA 2 cut(s) 48, 1764
BsrI ACTGG 2 cut(s) 36, 1741
BssAI RCCGGY 3 cut(s) 1383, 2071, 2096
BssECI CCNNGG 6 cut(s) 312, 798, 1134, 1516, 1654, 1890
BssHII GCGCGC 1 cut(s) 1649
BssMI GATC 9 cut(s) 3, 159, 190, 234, 241, 598, 1265, 1338, 1539
BssSI CACGAG 2 cut(s) 1454, 1979
BssT1I CCWWGG 2 cut(s) 1516, 1654
Bst2BI CACGAG 2 cut(s) 1454, 1979
Bst2UI CCWGG 5 cut(s) 275, 1135, 1330, 1577, 2009
Bst4CI ACNGT 6 cut(s) 71, 185, 421, 964, 1104, 1812
Bst6I CTCTTC 4 cut(s) 635, 747, 1115, 1163
BstAFI CTTAAG 1 cut(s) 1073
BstAUI TGTACA 2 cut(s) 48, 1764
BstBI TTCGAA 1 cut(s) 43
BstDEI CTNAG 5 cut(s) 670, 809, 1477, 1670, 1989
BstDSI CCRYGG 1 cut(s) 1890
BstFNI CGCG 4 cut(s) 663, 1649, 1651, 2080
BstH2I RGCGCY 2 cut(s) 1685, 2036
BstHHI GCGC 7 cut(s) 1392, 1651, 1653, 1679, 1684, 1933, 2035
BstKTI GATC 9 cut(s) 6, 162, 193, 237, 244, 601, 1268, 1341, 1542
BstMAI GTCTC 5 cut(s) 108, 744, 788, 914, 2047
BstMBI GATC 9 cut(s) 3, 159, 190, 234, 241, 598, 1265, 1338, 1539
BstMCI CGRYCG 2 cut(s) 300, 1811
BstMWI GCNNNNNNNGC 7 cut(s) 136, 1665, 1674, 1951, 2077, 2102, 2128
BstNI CCWGG 5 cut(s) 275, 1135, 1330, 1577, 2009
BstPAI GACNNNNGTC 1 cut(s) 2003
BstSCI CCNGG 6 cut(s) 273, 1133, 1328, 1575, 2007, 2018
BstSFI CTRYAG 3 cut(s) 128, 134, 227
BstSLI GKGCMC 1 cut(s) 1703
BstUI CGCG 4 cut(s) 663, 1649, 1651, 2080
BstV1I GCAGC 9 cut(s) 47, 120, 142, 148, 241, 436, 1374, 1485, 1691
BstV2I GAAGAC 1 cut(s) 1166
BstX2I RGATCY 2 cut(s) 159, 1265
BstYI RGATCY 2 cut(s) 159, 1265
BsuI GTATCC 1 cut(s) 1703
BtgI CCRYGG 1 cut(s) 1890
BtrI CACGTC 2 cut(s) 1762, 1877
BtsI GCAGTG 1 cut(s) 1320
BtsIMutI CAGTG 3 cut(s) 426, 1320, 1734
BtuMI TCGCGA 1 cut(s) 663
BveI ACCTGC 3 cut(s) 763, 1757, 2065
CaiI CAGNNNCTG 1 cut(s) 463
CfoI GCGC 7 cut(s) 1392, 1651, 1653, 1679, 1684, 1933, 2035
Cfr10I RCCGGY 3 cut(s) 1383, 2071, 2096
Cfr13I GGNCC 4 cut(s) 512, 687, 1131, 1499
CpoI CGGWCCG 1 cut(s) 1499
CseI GACGC 1 cut(s) 1169
Csp6I GTAC 7 cut(s) 49, 761, 818, 980, 1534, 1765, 1813
CspI CGGWCCG 1 cut(s) 1499
CviAII CATG 2 cut(s) 64, 1462
CviQI GTAC 7 cut(s) 49, 761, 818, 980, 1534, 1765, 1813
DdeI CTNAG 5 cut(s) 670, 809, 1477, 1670, 1989
DpnI GATC 9 cut(s) 5, 161, 192, 236, 243, 600, 1267, 1340, 1541
DpnII GATC 9 cut(s) 3, 159, 190, 234, 241, 598, 1265, 1338, 1539
DraI TTTAAA 2 cut(s) 120, 2053
DrdI GACNNNNNNGTC 3 cut(s) 304, 1102, 1753
DseDI GACNNNNNNGTC 3 cut(s) 304, 1102, 1753
EaeI YGGCCR 5 cut(s) 1614, 2069, 2073, 2094, 2098
Eam1104I CTCTTC 4 cut(s) 635, 747, 1115, 1163
EarI CTCTTC 4 cut(s) 635, 747, 1115, 1163
EciI GGCGGA 1 cut(s) 1278
Eco130I CCWWGG 2 cut(s) 1516, 1654
Eco147I AGGCCT 1 cut(s) 1987
Eco31I GGTCTC 2 cut(s) 108, 788
Eco47I GGWCC 3 cut(s) 512, 687, 1499
Eco47III AGCGCT 1 cut(s) 1683
Eco57I CTGAAG 2 cut(s) 1542, 1648
Eco88I CYCGRG 1 cut(s) 1721
EcoRII CCWGG 5 cut(s) 273, 1133, 1328, 1575, 2007
EcoT14I CCWWGG 2 cut(s) 1516, 1654
ErhI CCWWGG 2 cut(s) 1516, 1654
Esp3I CGTCTC 1 cut(s) 914
FaeI CATG 2 cut(s) 67, 1465
FalI AAGNNNNNCTT 2 cut(s) 146, 178
FaqI GGGAC 3 cut(s) 305, 1157, 1391
FatI CATG 2 cut(s) 63, 1461
FauI CCCGC 1 cut(s) 1690
FblI GTMKAC 2 cut(s) 308, 497
Fnu4HI GCNGC 9 cut(s) 61, 131, 134, 137, 230, 450, 1388, 1474, 1680
FseI GGCCGGCC 2 cut(s) 2075, 2100
Fsp4HI GCNGC 9 cut(s) 61, 131, 134, 137, 230, 450, 1388, 1474, 1680
FspBI CTAG 8 cut(s) 260, 542, 617, 1041, 1128, 1334, 1517, 1787
GlaI GCGC 7 cut(s) 1391, 1650, 1652, 1678, 1683, 1932, 2034
GluI GCNGC 9 cut(s) 61, 131, 134, 137, 230, 450, 1388, 1474, 1680
GsuI CTGGAG 5 cut(s) 296, 1312, 1559, 1569, 1758
HaeII RGCGCY 2 cut(s) 1685, 2036
HapII CCGG 7 cut(s) 1178, 1384, 1497, 1502, 2019, 2072, 2097
HgaI GACGC 1 cut(s) 1169
HhaI GCGC 7 cut(s) 1392, 1651, 1653, 1679, 1684, 1933, 2035
Hin1II CATG 2 cut(s) 67, 1465
Hin6I GCGC 7 cut(s) 1390, 1649, 1651, 1677, 1682, 1931, 2033
HinP1I GCGC 7 cut(s) 1390, 1649, 1651, 1677, 1682, 1931, 2033
HincII GTYRAC 4 cut(s) 309, 498, 960, 1805
HindII GTYRAC 4 cut(s) 309, 498, 960, 1805
HindIII AAGCTT 1 cut(s) 1067
HinfI GANTC 7 cut(s) 293, 425, 737, 1145, 1171, 1634, 1754
HpaII CCGG 7 cut(s) 1178, 1384, 1497, 1502, 2019, 2072, 2097
HphI GGTGA 3 cut(s) 907, 1192, 1363
Hpy188I TCNGA 5 cut(s) 400, 673, 1024, 1759, 1826
Hpy99I CGWCG 3 cut(s) 980, 1104, 1763
HpyCH4III ACNGT 6 cut(s) 71, 185, 421, 964, 1104, 1812
HpyCH4IV ACGT 3 cut(s) 978, 1761, 1876
HpyF10VI GCNNNNNNNGC 7 cut(s) 136, 1665, 1674, 1951, 2077, 2102, 2128
HpyF3I CTNAG 5 cut(s) 670, 809, 1477, 1670, 1989
HpySE526I ACGT 3 cut(s) 978, 1761, 1876
Hsp92II CATG 2 cut(s) 67, 1465
HspAI GCGC 7 cut(s) 1390, 1649, 1651, 1677, 1682, 1931, 2033
Kpn2I TCCGGA 1 cut(s) 1496
KroI GCCGGC 2 cut(s) 2071, 2096
KroNI GCCGGC 2 cut(s) 2073, 2098
Kzo9I GATC 9 cut(s) 3, 159, 190, 234, 241, 598, 1265, 1338, 1539
LmnI GCTCC 3 cut(s) 277, 1207, 1331
Lsp1109I GCAGC 9 cut(s) 47, 120, 142, 148, 241, 436, 1374, 1485, 1691
LweI GCATC 2 cut(s) 495, 1428
MaeI CTAG 8 cut(s) 260, 542, 617, 1041, 1128, 1334, 1517, 1787
MaeII ACGT 3 cut(s) 978, 1761, 1876
MaeIII GTNAC 2 cut(s) 347, 1199
MalI GATC 9 cut(s) 5, 161, 192, 236, 243, 600, 1267, 1340, 1541
MboI GATC 9 cut(s) 3, 159, 190, 234, 241, 598, 1265, 1338, 1539
MflI RGATCY 2 cut(s) 159, 1265
MhlI GDGCHC 3 cut(s) 671, 1328, 1703
MluCI AATT 6 cut(s) 92, 167, 516, 728, 837, 1028
MlyI GAGTC 5 cut(s) 287, 746, 1139, 1180, 1763
MmeI TCCRAC 1 cut(s) 1782
MroI TCCGGA 1 cut(s) 1496
MroNI GCCGGC 2 cut(s) 2071, 2096
MroXI GAANNNNTTC 1 cut(s) 269
MseI TTAA 4 cut(s) 119, 551, 1074, 2052
MslI CAYNNNNRTG 1 cut(s) 756
MspA1I CMGCKG 1 cut(s) 133
MspCI CTTAAG 1 cut(s) 1073
MspI CCGG 7 cut(s) 1178, 1384, 1497, 1502, 2019, 2072, 2097
MspR9I CCNGG 6 cut(s) 275, 1135, 1330, 1577, 2009, 2020
MteI GCGCNGCGC 1 cut(s) 1680
Mva1269I GAATGC 2 cut(s) 289, 636
MvaI CCWGG 5 cut(s) 275, 1135, 1330, 1577, 2009
MvnI CGCG 4 cut(s) 663, 1649, 1651, 2080
MwoI GCNNNNNNNGC 7 cut(s) 136, 1665, 1674, 1951, 2077, 2102, 2128
NaeI GCCGGC 2 cut(s) 2073, 2098
NciI CCSGG 1 cut(s) 2020
NdeII GATC 9 cut(s) 3, 159, 190, 234, 241, 598, 1265, 1338, 1539
NgoMIV GCCGGC 2 cut(s) 2071, 2096
NlaIII CATG 2 cut(s) 67, 1465
NlaIV GGNNCC 1 cut(s) 1526
NmeAIII GCCGAG 1 cut(s) 293
NmuCI GTSAC 1 cut(s) 347
NruI TCGCGA 1 cut(s) 663
NspV TTCGAA 1 cut(s) 43
OliI CACNNNNGTG 1 cut(s) 756
PauI GCGCGC 1 cut(s) 1649
PceI AGGCCT 1 cut(s) 1987
PcsI WCGNNNNNNNCGW 1 cut(s) 75
PctI GAATGC 2 cut(s) 289, 636
PdiI GCCGGC 2 cut(s) 2073, 2098
PdmI GAANNNNTTC 1 cut(s) 269
PfeI GAWTC 2 cut(s) 425, 1634
PflMI CCANNNNNTGG 1 cut(s) 521
PfoI TCCNGGA 2 cut(s) 273, 1575
PkrI GCNGC 9 cut(s) 62, 132, 135, 138, 231, 451, 1389, 1475, 1681
PleI GAGTC 5 cut(s) 287, 745, 1139, 1179, 1762
PpsI GAGTC 5 cut(s) 287, 745, 1139, 1179, 1762
PshAI GACNNNNGTC 1 cut(s) 2003
Psp6I CCWGG 5 cut(s) 273, 1133, 1328, 1575, 2007
PspGI CCWGG 5 cut(s) 273, 1133, 1328, 1575, 2007
PspN4I GGNNCC 1 cut(s) 1526
PspPI GGNCC 4 cut(s) 512, 687, 1131, 1499
PsrI GAACNNNNNNTAC 4 cut(s) 642, 674, 1517, 1549
PstI CTGCAG 3 cut(s) 132, 138, 231
PstNI CAGNNNCTG 1 cut(s) 463
PsuI RGATCY 2 cut(s) 159, 1265
PteI GCGCGC 1 cut(s) 1649
PvuII CAGCTG 1 cut(s) 133
RigI GGCCGGCC 2 cut(s) 2075, 2100
RruI TCGCGA 1 cut(s) 663
RsaI GTAC 7 cut(s) 50, 762, 819, 981, 1535, 1766, 1814
RsaNI GTAC 7 cut(s) 49, 761, 818, 980, 1534, 1765, 1813
RseI CAYNNNNRTG 1 cut(s) 756
Rsr2I CGGWCCG 1 cut(s) 1499
RsrII CGGWCCG 1 cut(s) 1499
SalI GTCGAC 2 cut(s) 307, 496
SaqAI TTAA 4 cut(s) 119, 551, 1074, 2052
SatI GCNGC 9 cut(s) 61, 131, 134, 137, 230, 450, 1388, 1474, 1680
Sau3AI GATC 9 cut(s) 3, 159, 190, 234, 241, 598, 1265, 1338, 1539
Sau96I GGNCC 4 cut(s) 512, 687, 1131, 1499
SchI GAGTC 5 cut(s) 287, 746, 1139, 1180, 1763
ScrFI CCNGG 6 cut(s) 275, 1135, 1330, 1577, 2009, 2020
SduI GDGCHC 3 cut(s) 671, 1328, 1703
SfaNI GCATC 2 cut(s) 495, 1428
SfcI CTRYAG 3 cut(s) 128, 134, 227
SfuI TTCGAA 1 cut(s) 43
SinI GGWCC 3 cut(s) 512, 687, 1499
SmiMI CAYNNNNRTG 1 cut(s) 756
SmlI CTYRAG 2 cut(s) 1073, 1883
SmoI CTYRAG 2 cut(s) 1073, 1883
Sse9I AATT 6 cut(s) 92, 167, 516, 728, 837, 1028
SseBI AGGCCT 1 cut(s) 1987
SsiI CCGC 4 cut(s) 1263, 1697, 1778, 1800
SspMI CTAG 8 cut(s) 260, 542, 617, 1041, 1128, 1334, 1517, 1787
StuI AGGCCT 1 cut(s) 1987
StyD4I CCNGG 6 cut(s) 273, 1133, 1328, 1575, 2007, 2018
StyI CCWWGG 2 cut(s) 1516, 1654
TaaI ACNGT 6 cut(s) 71, 185, 421, 964, 1104, 1812
TaiI ACGT 3 cut(s) 981, 1764, 1879
TaqII GACCGA 1 cut(s) 314
TasI AATT 6 cut(s) 92, 167, 516, 728, 837, 1028
TatI WGTACW 3 cut(s) 48, 760, 1764
TfiI GAWTC 2 cut(s) 425, 1634
Tru1I TTAA 4 cut(s) 119, 551, 1074, 2052
Tru9I TTAA 4 cut(s) 119, 551, 1074, 2052
TscAI CASTG 3 cut(s) 426, 1320, 1741
TseFI GTSAC 1 cut(s) 347
TseI GCWGC 9 cut(s) 60, 130, 133, 136, 229, 449, 1387, 1473, 1679
Tsp45I GTSAC 1 cut(s) 347
TspDTI ATGAA 9 cut(s) 105, 213, 218, 266, 653, 668, 915, 1079, 1450
TspGWI ACGGA 1 cut(s) 1574
TspRI CASTG 3 cut(s) 426, 1320, 1741
Van91I CCANNNNNTGG 1 cut(s) 521
Vha464I CTTAAG 1 cut(s) 1073
VpaK11BI GGWCC 3 cut(s) 512, 687, 1499
XbaI TCTAGA 1 cut(s) 1040
XcmI CCANNNNNNNNNTGG 1 cut(s) 1416
XmaJI CCTAGG 1 cut(s) 1516
XmiI GTMKAC 2 cut(s) 308, 497
XmnI GAANNNNTTC 1 cut(s) 269
XspI CTAG 8 cut(s) 260, 542, 617, 1041, 1128, 1334, 1517, 1787
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.