Rmu_sc0030028.1_g000001

L-type lectin-domain containing receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0030028.1
Physical Location & Seq
Reverse (-)
2 .. 2102
2101 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0030028.1_g000001.1.cds

Sequence Viewer

Length: 1293 bp
atggttttttctcaaagattatcaatcatctacttggttttcacctttgccataatttttgtagcatcagcagctgatcctaggcaattcccctttaccacattcagtgaaaaaactgaccaatctgtattccatttcacggattattcatccattgatcaaggggcacttcagttaaccccagacactgagaatgcagacggcggctattttaacaagtccggcaggatcatgtatgacaaaccttatagactctggtcatctgacaatgaagacgatgatgatgttgcctccttcaactcgactttcgtcatgaacatctaccgtcagaaaggctggactgttggtgaagggtttgcttttcttatagcctcggatttgaacatgcctgaaccaagttatgggcagtggctaggcctcaccagtgccaccactgatggtaatgctacaaaccacatggttgccatagaattcgacacaagaaagcaagatttcgaccccgatgacaaccatataggcctcaacatcaactctgtaagatcaagtaagactgtttctcttgagcctttcgacattgagatatcaccggaggtaggcaccaactacaccgtgtgggtgcaatacaatggcagctcaaaagtcattgaagtctacatggctaagcgcatcataaacatcccaccagtaaggccggagacaccgcttatgagggagccaataaacttgaaacaatatctaaaacaagactcctactttggattttctggttccacaggtagccgggctaaacagctaaactgtgttttggaatggaatctagtggttcaagaattcaagaccagaaaggatatgactttgttgaagatcggtgtgccagcattggttttgttagtagtatttggtgttattttgggagttgggtatgtcaagaagaggaaaagaaccactcttgaggagtccattgtgctcgggacactgaagaggttgccagggatgccgagggagttcaagtacaaagagctcaagtatgcaactaataatttccatgcgagtatgatcctgggacaaggtggatttggcgttgtttacagagggactctggttgattttgatgatgcaaatgctactaatgagtctgcagaaattgctgtcaagcaattctcaagagacaacaccaaaggcaaagatgatttcatggcagaactaaccatcattcaccgccttcgccacaaaaatcttgtccggttagtaggatggtgctatgagaaaggaaagcttcttttagtatatgat
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

431

Amino Acids

48.84

Weight (kDa)

6.14

Isoelectric Point (pI)

40.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000688)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 596
AccB7I CCANNNNNTGG 1 cut(s) 401
AccI GTMKAC 1 cut(s) 651
AciI CCGC 3 cut(s) 204, 701, 1219
AclWI GGATC 3 cut(s) 71, 236, 1051
AcsI RAATTY 2 cut(s) 470, 830
AcuI CTGAAG 2 cut(s) 155, 998
AdeI CACNNNGTG 1 cut(s) 612
AfaI GTAC 1 cut(s) 1013
AfiI CCNNNNNNNGG 3 cut(s) 139, 401, 593
AgsI TTSAA 8 cut(s) 298, 382, 647, 727, 827, 835, 862, 1009
AjnI CCWGG 2 cut(s) 988, 1059
AluBI AGCT 5 cut(s) 74, 633, 793, 1021, 1276
AluI AGCT 5 cut(s) 74, 633, 793, 1021, 1276
Alw21I GWGCWC 2 cut(s) 969, 1023
Alw26I GTCTC 2 cut(s) 689, 1161
AlwI GGATC 3 cut(s) 71, 236, 1051
AlwNI CAGNNNCTG 2 cut(s) 74, 188
Ama87I CYCGRG 1 cut(s) 968
AoxI GGCC 3 cut(s) 415, 517, 689
ApeKI GCWGC 2 cut(s) 71, 630
ApoI RAATTY 2 cut(s) 470, 830
ArsI GACNNNNNNTTYG 4 cut(s) 737, 769, 1224, 1256
AspA2I CCTAGG 1 cut(s) 80
AspLEI GCGC 1 cut(s) 666
AsuC2I CCSGG 1 cut(s) 782
AsuHPI GGTGA 5 cut(s) 34, 359, 412, 576, 1208
AvaI CYCGRG 1 cut(s) 968
AvrII CCTAGG 1 cut(s) 80
BaeGI GKGCMC 1 cut(s) 169
BanI GGYRCC 1 cut(s) 596
BanII GRGCYC 1 cut(s) 1023
BbsI GAAGAC 1 cut(s) 279
Bbv12I GWGCWC 2 cut(s) 969, 1023
BbvI GCAGC 2 cut(s) 83, 642
BccI CCATC 3 cut(s) 431, 1217, 1248
BceAI ACGGC 1 cut(s) 217
BciT130I CCWGG 2 cut(s) 990, 1061
BclI TGATCA 1 cut(s) 157
BcnI CCSGG 1 cut(s) 782
BcoDI GTCTC 2 cut(s) 689, 1161
BfaI CTAG 3 cut(s) 81, 413, 818
BfmI CTRYAG 1 cut(s) 1137
BisI GCNGC 3 cut(s) 72, 205, 631
BlnI CCTAGG 1 cut(s) 80
BlpI GCTNAGC 1 cut(s) 660
BlsI GCNGC 3 cut(s) 73, 206, 632
Bme1390I CCNGG 3 cut(s) 782, 990, 1061
BmeT110I CYCGRG 1 cut(s) 968
BmiI GGNNCC 3 cut(s) 598, 714, 769
BmrFI CCNGG 3 cut(s) 782, 990, 1061
BmsI GCATC 4 cut(s) 74, 675, 984, 1105
BoxI GACNNNNGTC 2 cut(s) 256, 308
BpiI GAAGAC 1 cut(s) 279
Bpu1102I GCTNAGC 1 cut(s) 660
BpuEI CTTGAG 4 cut(s) 581, 971, 1007, 1147
BpuMI CCSGG 1 cut(s) 782
BsaJI CCNNGG 5 cut(s) 80, 372, 989, 998, 1060
BsaWI WCCGGW 2 cut(s) 586, 1242
BsaXI ACNNNNNCTCC 2 cut(s) 995, 1025
Bsc4I CCNNNNNNNGG 3 cut(s) 139, 401, 593
Bse1I ACTGG 2 cut(s) 423, 683
BseBI CCWGG 2 cut(s) 990, 1061
BseDI CCNNGG 5 cut(s) 80, 372, 989, 998, 1060
BseGI GGATG 4 cut(s) 149, 675, 999, 1259
BseLI CCNNNNNNNGG 3 cut(s) 139, 401, 593
BseMII CTCAG 1 cut(s) 180
BseNI ACTGG 2 cut(s) 423, 683
BseRI GAGGAG 1 cut(s) 968
BseSI GKGCMC 1 cut(s) 169
BseXI GCAGC 2 cut(s) 83, 642
BshFI GGCC 3 cut(s) 417, 519, 691
BshNI GGYRCC 1 cut(s) 596
BsiHKAI GWGCWC 2 cut(s) 969, 1023
BsiHKCI CYCGRG 1 cut(s) 968
BsiSI CCGG 5 cut(s) 222, 587, 692, 781, 1243
BslFI GGGAC 3 cut(s) 985, 1077, 1108
BslI CCNNNNNNNGG 3 cut(s) 139, 401, 593
BsmAI GTCTC 2 cut(s) 689, 1161
BsmFI GGGAC 3 cut(s) 985, 1077, 1108
BsmI GAATGC 1 cut(s) 199
BsnI GGCC 3 cut(s) 417, 519, 691
BsoBI CYCGRG 1 cut(s) 968
Bsp1286I GDGCHC 3 cut(s) 169, 969, 1023
Bsp143I GATC 6 cut(s) 76, 157, 228, 539, 864, 1056
Bsp1720I GCTNAGC 1 cut(s) 660
BspACI CCGC 3 cut(s) 204, 701, 1219
BspANI GGCC 3 cut(s) 417, 519, 691
BspCNI CTCAG 1 cut(s) 181
BspHI TCATGA 1 cut(s) 312
BspLI GGNNCC 3 cut(s) 598, 714, 769
BspMAI CTGCAG 1 cut(s) 1141
BspPI GGATC 3 cut(s) 71, 236, 1051
BspT107I GGYRCC 1 cut(s) 596
BsrI ACTGG 2 cut(s) 423, 683
BssECI CCNNGG 5 cut(s) 80, 372, 989, 998, 1060
BssMI GATC 6 cut(s) 76, 157, 228, 539, 864, 1056
BssT1I CCWWGG 1 cut(s) 80
Bst2UI CCWGG 2 cut(s) 990, 1061
Bst4CI ACNGT 5 cut(s) 326, 343, 553, 610, 800
Bst6I CTCTTC 2 cut(s) 926, 974
BstAPI GCANNNNNTGC 1 cut(s) 1145
BstC8I GCNNGC 1 cut(s) 876
BstDEI CTNAG 2 cut(s) 189, 660
BstF5I GGATG 4 cut(s) 149, 675, 999, 1259
BstHHI GCGC 1 cut(s) 666
BstKTI GATC 6 cut(s) 79, 160, 231, 542, 867, 1059
BstMAI GTCTC 2 cut(s) 689, 1161
BstMBI GATC 6 cut(s) 76, 157, 228, 539, 864, 1056
BstMWI GCNNNNNNNGC 3 cut(s) 71, 994, 1145
BstNI CCWGG 2 cut(s) 990, 1061
BstNSI RCATGY 1 cut(s) 388
BstPAI GACNNNNGTC 2 cut(s) 256, 308
BstSCI CCNGG 3 cut(s) 780, 988, 1059
BstSFI CTRYAG 1 cut(s) 1137
BstSLI GKGCMC 1 cut(s) 169
BstV1I GCAGC 2 cut(s) 83, 642
BstV2I GAAGAC 1 cut(s) 279
BsuRI GGCC 3 cut(s) 417, 519, 691
BtsCI GGATG 4 cut(s) 149, 675, 999, 1259
BtsI GCAGTG 1 cut(s) 413
BtsIMutI CAGTG 6 cut(s) 112, 186, 413, 430, 432, 974
Cac8I GCNNGC 1 cut(s) 876
CaiI CAGNNNCTG 2 cut(s) 74, 188
CciI TCATGA 1 cut(s) 312
CfoI GCGC 1 cut(s) 666
Csp6I GTAC 1 cut(s) 1012
CviAII CATG 7 cut(s) 232, 313, 385, 457, 655, 1046, 1195
CviQI GTAC 1 cut(s) 1012
DdeI CTNAG 2 cut(s) 189, 660
DpnI GATC 6 cut(s) 78, 159, 230, 541, 866, 1058
DpnII GATC 6 cut(s) 76, 157, 228, 539, 864, 1056
DraIII CACNNNGTG 1 cut(s) 612
Eam1104I CTCTTC 2 cut(s) 926, 974
EarI CTCTTC 2 cut(s) 926, 974
Ecl136II GAGCTC 1 cut(s) 1021
Eco130I CCWWGG 1 cut(s) 80
Eco147I AGGCCT 2 cut(s) 417, 519
Eco24I GRGCYC 1 cut(s) 1023
Eco32I GATATC 1 cut(s) 582
Eco53kI GAGCTC 1 cut(s) 1021
Eco57I CTGAAG 2 cut(s) 155, 998
Eco88I CYCGRG 1 cut(s) 968
EcoICRI GAGCTC 1 cut(s) 1021
EcoRI GAATTC 2 cut(s) 470, 830
EcoRII CCWGG 2 cut(s) 988, 1059
EcoRV GATATC 1 cut(s) 582
EcoT14I CCWWGG 1 cut(s) 80
EcoT38I GRGCYC 1 cut(s) 1023
ErhI CCWWGG 1 cut(s) 80
FaeI CATG 7 cut(s) 235, 316, 388, 460, 658, 1049, 1198
FalI AAGNNNNNCTT 4 cut(s) 153, 185, 1260, 1292
FaqI GGGAC 3 cut(s) 985, 1077, 1108
FatI CATG 7 cut(s) 231, 312, 384, 456, 654, 1045, 1194
FbaI TGATCA 1 cut(s) 157
FblI GTMKAC 1 cut(s) 651
Fnu4HI GCNGC 3 cut(s) 72, 205, 631
FokI GGATG 4 cut(s) 136, 662, 1006, 1266
FriOI GRGCYC 1 cut(s) 1023
Fsp4HI GCNGC 3 cut(s) 72, 205, 631
FspBI CTAG 3 cut(s) 81, 413, 818
GlaI GCGC 1 cut(s) 665
GluI GCNGC 3 cut(s) 72, 205, 631
HaeIII GGCC 3 cut(s) 417, 519, 691
HapII CCGG 5 cut(s) 222, 587, 692, 781, 1243
HhaI GCGC 1 cut(s) 666
Hin1II CATG 7 cut(s) 235, 316, 388, 460, 658, 1049, 1198
Hin6I GCGC 1 cut(s) 664
HinP1I GCGC 1 cut(s) 664
HincII GTYRAC 1 cut(s) 177
HindII GTYRAC 1 cut(s) 177
HindIII AAGCTT 1 cut(s) 1274
HinfI GANTC 6 cut(s) 252, 746, 814, 956, 1096, 1133
HpaI GTTAAC 1 cut(s) 177
HpaII CCGG 5 cut(s) 222, 587, 692, 781, 1243
HphI GGTGA 5 cut(s) 34, 359, 412, 576, 1208
Hpy166II GTNNAC 3 cut(s) 177, 652, 1087
Hpy188I TCNGA 3 cut(s) 265, 330, 376
Hpy188III TCNNGA 8 cut(s) 313, 560, 827, 835, 928, 950, 970, 1164
Hpy8I GTNNAC 3 cut(s) 177, 652, 1087
HpyAV CCTTC 3 cut(s) 304, 344, 1232
HpyCH4III ACNGT 5 cut(s) 326, 343, 553, 610, 800
HpyCH4V TGCA 5 cut(s) 197, 619, 1031, 1118, 1139
HpyF10VI GCNNNNNNNGC 3 cut(s) 71, 994, 1145
HpyF3I CTNAG 2 cut(s) 189, 660
Hsp92II CATG 7 cut(s) 235, 316, 388, 460, 658, 1049, 1198
HspAI GCGC 1 cut(s) 664
Ksp22I TGATCA 1 cut(s) 157
KspAI GTTAAC 1 cut(s) 177
Kzo9I GATC 6 cut(s) 76, 157, 228, 539, 864, 1056
LmnI GCTCC 1 cut(s) 712
Lsp1109I GCAGC 2 cut(s) 83, 642
LweI GCATC 4 cut(s) 74, 675, 984, 1105
MaeI CTAG 3 cut(s) 81, 413, 818
MalI GATC 6 cut(s) 78, 159, 230, 541, 866, 1058
MboI GATC 6 cut(s) 76, 157, 228, 539, 864, 1056
MboII GAAGA 4 cut(s) 284, 874, 943, 991
MhlI GDGCHC 3 cut(s) 169, 969, 1023
MluCI AATT 7 cut(s) 54, 86, 470, 830, 1039, 1143, 1157
MlyI GAGTC 5 cut(s) 246, 740, 965, 1090, 1142
MseI TTAA 2 cut(s) 176, 213
MspA1I CMGCKG 1 cut(s) 74
MspI CCGG 5 cut(s) 222, 587, 692, 781, 1243
MspR9I CCNGG 3 cut(s) 782, 990, 1061
Mva1269I GAATGC 1 cut(s) 199
MvaI CCWGG 2 cut(s) 990, 1061
MwoI GCNNNNNNNGC 3 cut(s) 71, 994, 1145
NciI CCSGG 1 cut(s) 782
NdeII GATC 6 cut(s) 76, 157, 228, 539, 864, 1056
NlaIII CATG 7 cut(s) 235, 316, 388, 460, 658, 1049, 1198
NlaIV GGNNCC 3 cut(s) 598, 714, 769
NmeAIII GCCGAG 1 cut(s) 1023
NspI RCATGY 1 cut(s) 388
PagI TCATGA 1 cut(s) 312
PceI AGGCCT 2 cut(s) 417, 519
PctI GAATGC 1 cut(s) 199
PfeI GAWTC 1 cut(s) 814
PflMI CCANNNNNTGG 1 cut(s) 401
PkrI GCNGC 3 cut(s) 73, 206, 632
PleI GAGTC 5 cut(s) 246, 740, 964, 1090, 1141
PpsI GAGTC 5 cut(s) 246, 740, 964, 1090, 1141
PshAI GACNNNNGTC 2 cut(s) 256, 308
Psp124BI GAGCTC 1 cut(s) 1023
Psp6I CCWGG 2 cut(s) 988, 1059
PspGI CCWGG 2 cut(s) 988, 1059
PspN4I GGNNCC 3 cut(s) 598, 714, 769
PstI CTGCAG 1 cut(s) 1141
PstNI CAGNNNCTG 2 cut(s) 74, 188
PvuII CAGCTG 1 cut(s) 74
RsaI GTAC 1 cut(s) 1013
RsaNI GTAC 1 cut(s) 1012
SacI GAGCTC 1 cut(s) 1023
SaqAI TTAA 2 cut(s) 176, 213
SatI GCNGC 3 cut(s) 72, 205, 631
Sau3AI GATC 6 cut(s) 76, 157, 228, 539, 864, 1056
SchI GAGTC 5 cut(s) 246, 740, 965, 1090, 1142
ScrFI CCNGG 3 cut(s) 782, 990, 1061
SduI GDGCHC 3 cut(s) 169, 969, 1023
SfaNI GCATC 4 cut(s) 74, 675, 984, 1105
SfcI CTRYAG 1 cut(s) 1137
SmlI CTYRAG 4 cut(s) 560, 950, 1022, 1162
SmoI CTYRAG 4 cut(s) 560, 950, 1022, 1162
Sse9I AATT 7 cut(s) 54, 86, 470, 830, 1039, 1143, 1157
SseBI AGGCCT 2 cut(s) 417, 519
SsiI CCGC 3 cut(s) 204, 701, 1219
SspMI CTAG 3 cut(s) 81, 413, 818
SstI GAGCTC 1 cut(s) 1023
StuI AGGCCT 2 cut(s) 417, 519
StyD4I CCNGG 3 cut(s) 780, 988, 1059
StyI CCWWGG 1 cut(s) 80
TaaI ACNGT 5 cut(s) 326, 343, 553, 610, 800
TaqI TCGA 4 cut(s) 302, 474, 495, 570
TasI AATT 7 cut(s) 54, 86, 470, 830, 1039, 1143, 1157
TatI WGTACW 1 cut(s) 1011
TauI GCSGC 1 cut(s) 207
TfiI GAWTC 1 cut(s) 814
Tru1I TTAA 2 cut(s) 176, 213
Tru9I TTAA 2 cut(s) 176, 213
TscAI CASTG 6 cut(s) 112, 193, 413, 430, 439, 981
TseI GCWGC 2 cut(s) 71, 630
TspDTI ATGAA 4 cut(s) 138, 285, 329, 1183
TspGWI ACGGA 1 cut(s) 155
TspRI CASTG 6 cut(s) 112, 193, 413, 430, 439, 981
Van91I CCANNNNNTGG 1 cut(s) 401
XapI RAATTY 2 cut(s) 470, 830
XceI RCATGY 1 cut(s) 388
XmaJI CCTAGG 1 cut(s) 80
XmiI GTMKAC 1 cut(s) 651
XspI CTAG 3 cut(s) 81, 413, 818
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.