Rmu_sc0027573.1_g000001

L-type lectin-domain containing receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0027573.1
Physical Location & Seq
Reverse (-)
349 .. 3562
3214 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0027573.1_g000001.1.cds

Sequence Viewer

Length: 1191 bp
atgtctagaaagaagaaaaactcgaagatgaagcttcttaaggatgggtgtcaatgcttgacccgacggtcattctacaagaggaagagggctagggccaggggaagggactcgaacaggttagacgctttgaagagtcttccagtgatgttgagggagttcagttacagggagctaaagaaagctaccaacaactttgacttgaagcacactttgggtcaaggtggatctgtggtttacagaggactgctgtcgaaggaaaatcttgaagtggcagtgaagaagtgctccaggctagagatcaagggtaaagaggatttcttggctgacctcaccattatttaccggctgcgtcacaaacatattgtcccattgcttggttggtgtcgccaaaagaagatgctactcatagtccacgagttcatgccaaatggcagcttagacaaccacctattctccggaccggaaaatacaaccctagaatggaaccagaggtacaagatcatatctggagtggcttcagtcctacattacctccaggagttccattgcaaagtagtccacagaaatatcacggccagccacataatgctcgattcccacttcaacgcgcgccttggcaacttcggcctgagaagcgcagaacccgaaggtgtggcgggcacaatgggatacattgcccccgagtgcttccacactggagagatgacctgcgagtccgacgtgtacggcttcggggcggtggttctagaagttgtttgcggtcaacgaccgtacaccaaaatcggagggtttcaggttttggttgattgggtgtggtcgttgcatagagaaggacgtgtgcttgaggccgtggatgagaggcttggaaatgagtatgatgttgaagaagcgcaaagacttctgcttcttgggctggcctgctctcatcccattgcttacgagaggcctaagagccagaccatagtccaggttgtttccgggtctattccagcgcccaaagtctcgccttttaaaccggctttcgtgtggccgaccttgtcagaaggatcggcagcattgccaatcgacactggtctcaggtgtcatcggcgacgtttcactggtaattccctcaggcggaggtctccggtcgccggaattccgacacttccactcccacacctacacccattcacactcgctctctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

396

Amino Acids

44.81

Weight (kDa)

9.71

Isoelectric Point (pI)

44.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000688)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 67, 715
Acc36I ACCTGC 1 cut(s) 719
AccB7I CCANNNNNTGG 1 cut(s) 377
AccII CGCG 2 cut(s) 611, 613
AccIII TCCGGA 1 cut(s) 458
AciI CCGC 4 cut(s) 659, 740, 762, 1120
AclWI GGATC 2 cut(s) 235, 1057
AcoI YGGCCR 2 cut(s) 576, 1031
AcsI RAATTY 1 cut(s) 1140
AcuI CTGAAG 1 cut(s) 504
AfaI GTAC 3 cut(s) 497, 728, 776
AfiI CCNNNNNNNGG 5 cut(s) 105, 377, 483, 1119, 1136
AflII CTTAAG 1 cut(s) 38
AflIII ACRYGT 2 cut(s) 723, 838
AgsI TTSAA 5 cut(s) 133, 205, 269, 607, 887
AjiI CACGTC 2 cut(s) 724, 839
AjnI CCWGG 4 cut(s) 98, 290, 537, 969
AjuI GAANNNNNNNTTGG 2 cut(s) 197, 229
AluBI AGCT 4 cut(s) 34, 175, 185, 438
AluI AGCT 4 cut(s) 34, 175, 185, 438
Alw21I GWGCWC 1 cut(s) 290
Alw26I GTCTC 3 cut(s) 1009, 1082, 1131
AlwI GGATC 2 cut(s) 235, 1057
Ama87I CYCGRG 1 cut(s) 683
Aor13HI TCCGGA 1 cut(s) 458
AoxI GGCC 7 cut(s) 96, 576, 628, 849, 918, 947, 1031
ApeKI GCWGC 3 cut(s) 349, 435, 1055
ApoI RAATTY 1 cut(s) 1140
ArsI GACNNNNNNTTYG 2 cut(s) 351, 383
AspLEI GCGC 5 cut(s) 613, 615, 641, 895, 997
AspS9I GGNCC 2 cut(s) 96, 461
AsuC2I CCSGG 1 cut(s) 982
AsuHPI GGTGA 1 cut(s) 325
AvaI CYCGRG 1 cut(s) 683
AvaII GGWCC 1 cut(s) 461
AxyI CCTNAGG 1 cut(s) 1115
BaeGI GKGCMC 1 cut(s) 665
BauI CACGAG 1 cut(s) 416
BbsI GAAGAC 1 cut(s) 131
Bbv12I GWGCWC 1 cut(s) 290
BbvI GCAGC 3 cut(s) 336, 447, 1067
BccI CCATC 1 cut(s) 38
BceAI ACGGC 3 cut(s) 591, 745, 836
BciT130I CCWGG 4 cut(s) 100, 292, 539, 971
BciVI GTATCC 1 cut(s) 665
BcnI CCSGG 1 cut(s) 982
BcoDI GTCTC 3 cut(s) 1009, 1082, 1131
BfaI CTAG 5 cut(s) 6, 93, 296, 479, 749
BfoI RGCGCY 1 cut(s) 998
BfrI CTTAAG 1 cut(s) 38
BfuAI ACCTGC 1 cut(s) 719
BfuI GTATCC 1 cut(s) 665
BisI GCNGC 3 cut(s) 350, 436, 1056
BlsI GCNGC 3 cut(s) 351, 437, 1057
Bme1390I CCNGG 5 cut(s) 100, 292, 539, 971, 982
Bme18I GGWCC 1 cut(s) 461
BmeT110I CYCGRG 1 cut(s) 683
BmgBI CACGTC 2 cut(s) 724, 839
BmgT120I GGNCC 2 cut(s) 96, 461
BmiI GGNNCC 1 cut(s) 488
BmrFI CCNGG 5 cut(s) 100, 292, 539, 971, 982
BmsI GCATC 1 cut(s) 390
BoxI GACNNNNGTC 3 cut(s) 250, 965, 1074
BpiI GAAGAC 1 cut(s) 131
BpmI CTGGAG 4 cut(s) 274, 521, 531, 720
BpuEI CTTGAG 1 cut(s) 866
BpuMI CCSGG 1 cut(s) 982
BsaI GGTCTC 2 cut(s) 1082, 1131
BsaJI CCNNGG 3 cut(s) 99, 616, 852
BsaWI WCCGGW 3 cut(s) 458, 463, 1129
BsaXI ACNNNNNCTCC 6 cut(s) 440, 470, 519, 549, 1140, 1170
Bsc4I CCNNNNNNNGG 5 cut(s) 105, 377, 483, 1119, 1136
Bse118I RCCGGY 2 cut(s) 345, 1018
Bse1I ACTGG 4 cut(s) 143, 703, 1078, 1108
Bse21I CCTNAGG 1 cut(s) 1115
Bse3DI GCAATG 5 cut(s) 371, 547, 675, 933, 1058
BseAI TCCGGA 1 cut(s) 458
BseBI CCWGG 4 cut(s) 100, 292, 539, 971
BseDI CCNNGG 3 cut(s) 99, 616, 852
BseGI GGATG 3 cut(s) 49, 862, 928
BseLI CCNNNNNNNGG 5 cut(s) 105, 377, 483, 1119, 1136
BseMI GCAATG 5 cut(s) 371, 547, 675, 933, 1058
BseMII CTCAG 3 cut(s) 623, 1093, 1129
BseNI ACTGG 4 cut(s) 143, 703, 1078, 1108
BsePI GCGCGC 1 cut(s) 611
BseSI GKGCMC 1 cut(s) 665
BseXI GCAGC 3 cut(s) 336, 447, 1067
Bsh1236I CGCG 2 cut(s) 611, 613
Bsh1285I CGRYCG 2 cut(s) 773, 1134
BshFI GGCC 7 cut(s) 98, 578, 630, 851, 920, 949, 1033
BsiEI CGRYCG 2 cut(s) 773, 1134
BsiHKAI GWGCWC 1 cut(s) 290
BsiHKCI CYCGRG 1 cut(s) 683
BsiSI CCGG 7 cut(s) 346, 459, 464, 981, 1019, 1130, 1137
BslFI GGGAC 2 cut(s) 122, 353
BslI CCNNNNNNNGG 5 cut(s) 105, 377, 483, 1119, 1136
BsmAI GTCTC 3 cut(s) 1009, 1082, 1131
BsmFI GGGAC 2 cut(s) 122, 353
BsnI GGCC 7 cut(s) 98, 578, 630, 851, 920, 949, 1033
Bso31I GGTCTC 2 cut(s) 1082, 1131
BsoBI CYCGRG 1 cut(s) 683
Bsp1286I GDGCHC 2 cut(s) 290, 665
Bsp13I TCCGGA 1 cut(s) 458
Bsp143I GATC 4 cut(s) 227, 300, 501, 1049
BspACI CCGC 4 cut(s) 659, 740, 762, 1120
BspANI GGCC 7 cut(s) 98, 578, 630, 851, 920, 949, 1033
BspCNI CTCAG 3 cut(s) 624, 1092, 1128
BspEI TCCGGA 1 cut(s) 458
BspFNI CGCG 2 cut(s) 611, 613
BspLI GGNNCC 1 cut(s) 488
BspMI ACCTGC 1 cut(s) 719
BspPI GGATC 2 cut(s) 235, 1057
BspTI CTTAAG 1 cut(s) 38
BspTNI GGTCTC 2 cut(s) 1082, 1131
BsrDI GCAATG 5 cut(s) 371, 547, 675, 933, 1058
BsrFI RCCGGY 2 cut(s) 345, 1018
BsrI ACTGG 4 cut(s) 143, 703, 1078, 1108
BssAI RCCGGY 2 cut(s) 345, 1018
BssECI CCNNGG 3 cut(s) 99, 616, 852
BssHII GCGCGC 1 cut(s) 611
BssMI GATC 4 cut(s) 227, 300, 501, 1049
BssSI CACGAG 1 cut(s) 416
BssT1I CCWWGG 1 cut(s) 616
Bst2BI CACGAG 1 cut(s) 416
Bst2UI CCWGG 4 cut(s) 100, 292, 539, 971
Bst4CI ACNGT 2 cut(s) 69, 774
Bst6I CTCTTC 2 cut(s) 80, 128
BstAFI CTTAAG 1 cut(s) 38
BstC8I GCNNGC 5 cut(s) 580, 613, 661, 918, 922
BstDEI CTNAG 5 cut(s) 439, 632, 951, 1079, 1115
BstDSI CCRYGG 1 cut(s) 852
BstF5I GGATG 3 cut(s) 49, 862, 928
BstFNI CGCG 2 cut(s) 611, 613
BstH2I RGCGCY 1 cut(s) 998
BstHHI GCGC 5 cut(s) 613, 615, 641, 895, 997
BstKTI GATC 4 cut(s) 230, 303, 504, 1052
BstMAI GTCTC 3 cut(s) 1009, 1082, 1131
BstMBI GATC 4 cut(s) 227, 300, 501, 1049
BstMCI CGRYCG 2 cut(s) 773, 1134
BstMWI GCNNNNNNNGC 3 cut(s) 627, 636, 913
BstNI CCWGG 4 cut(s) 100, 292, 539, 971
BstPAI GACNNNNGTC 3 cut(s) 250, 965, 1074
BstSCI CCNGG 5 cut(s) 98, 290, 537, 969, 980
BstSLI GKGCMC 1 cut(s) 665
BstUI CGCG 2 cut(s) 611, 613
BstV1I GCAGC 3 cut(s) 336, 447, 1067
BstV2I GAAGAC 1 cut(s) 131
BstX2I RGATCY 1 cut(s) 227
BstYI RGATCY 1 cut(s) 227
Bsu36I CCTNAGG 1 cut(s) 1115
BsuI GTATCC 1 cut(s) 665
BsuRI GGCC 7 cut(s) 98, 578, 630, 851, 920, 949, 1033
BtgI CCRYGG 1 cut(s) 852
BtrI CACGTC 2 cut(s) 724, 839
BtsCI GGATG 3 cut(s) 49, 862, 928
BtsI GCAGTG 1 cut(s) 282
BtsIMutI CAGTG 5 cut(s) 150, 282, 696, 1071, 1101
BveI ACCTGC 1 cut(s) 719
Cac8I GCNNGC 5 cut(s) 580, 613, 661, 918, 922
CfoI GCGC 5 cut(s) 613, 615, 641, 895, 997
Cfr10I RCCGGY 2 cut(s) 345, 1018
Cfr13I GGNCC 2 cut(s) 96, 461
CpoI CGGWCCG 1 cut(s) 461
CseI GACGC 2 cut(s) 134, 341
Csp6I GTAC 3 cut(s) 496, 727, 775
CspI CGGWCCG 1 cut(s) 461
CviAII CATG 1 cut(s) 424
CviQI GTAC 3 cut(s) 496, 727, 775
DdeI CTNAG 5 cut(s) 439, 632, 951, 1079, 1115
DpnI GATC 4 cut(s) 229, 302, 503, 1051
DpnII GATC 4 cut(s) 227, 300, 501, 1049
DraI TTTAAA 1 cut(s) 1015
DrdI GACNNNNNNGTC 2 cut(s) 67, 715
DseDI GACNNNNNNGTC 2 cut(s) 67, 715
EaeI YGGCCR 2 cut(s) 576, 1031
Eam1104I CTCTTC 2 cut(s) 80, 128
EarI CTCTTC 2 cut(s) 80, 128
EciI GGCGGA 1 cut(s) 1135
Eco130I CCWWGG 1 cut(s) 616
Eco147I AGGCCT 1 cut(s) 949
Eco31I GGTCTC 2 cut(s) 1082, 1131
Eco47I GGWCC 1 cut(s) 461
Eco57I CTGAAG 1 cut(s) 504
Eco81I CCTNAGG 1 cut(s) 1115
Eco88I CYCGRG 1 cut(s) 683
EcoRI GAATTC 1 cut(s) 1140
EcoRII CCWGG 4 cut(s) 98, 290, 537, 969
EcoT14I CCWWGG 1 cut(s) 616
ErhI CCWWGG 1 cut(s) 616
FaeI CATG 1 cut(s) 427
FaiI YATR 8 cut(s) 363, 410, 425, 506, 587, 828, 879, 965
FaqI GGGAC 2 cut(s) 122, 353
FatI CATG 1 cut(s) 423
FauI CCCGC 1 cut(s) 652
Fnu4HI GCNGC 3 cut(s) 350, 436, 1056
FokI GGATG 3 cut(s) 56, 869, 915
Fsp4HI GCNGC 3 cut(s) 350, 436, 1056
FspBI CTAG 5 cut(s) 6, 93, 296, 479, 749
GlaI GCGC 5 cut(s) 612, 614, 640, 894, 996
GluI GCNGC 3 cut(s) 350, 436, 1056
GsuI CTGGAG 4 cut(s) 274, 521, 531, 720
HaeII RGCGCY 1 cut(s) 998
HaeIII GGCC 7 cut(s) 98, 578, 630, 851, 920, 949, 1033
HapII CCGG 7 cut(s) 346, 459, 464, 981, 1019, 1130, 1137
HgaI GACGC 2 cut(s) 134, 341
HhaI GCGC 5 cut(s) 613, 615, 641, 895, 997
Hin1II CATG 1 cut(s) 427
Hin6I GCGC 5 cut(s) 611, 613, 639, 893, 995
HinP1I GCGC 5 cut(s) 611, 613, 639, 893, 995
HincII GTYRAC 1 cut(s) 767
HindII GTYRAC 1 cut(s) 767
HindIII AAGCTT 1 cut(s) 32
HinfI GANTC 4 cut(s) 110, 136, 596, 716
HpaII CCGG 7 cut(s) 346, 459, 464, 981, 1019, 1130, 1137
HphI GGTGA 1 cut(s) 325
Hpy166II GTNNAC 6 cut(s) 238, 415, 562, 727, 767, 777
Hpy188I TCNGA 5 cut(s) 721, 788, 1045, 1146, 1190
Hpy188III TCNNGA 5 cut(s) 6, 266, 459, 510, 749
Hpy8I GTNNAC 6 cut(s) 238, 415, 562, 727, 767, 777
Hpy99I CGWCG 3 cut(s) 69, 725, 1098
HpyAV CCTTC 5 cut(s) 99, 250, 644, 827, 1040
HpyCH4III ACNGT 2 cut(s) 69, 774
HpyCH4IV ACGT 3 cut(s) 723, 838, 1096
HpyCH4V TGCA 2 cut(s) 552, 826
HpyF10VI GCNNNNNNNGC 3 cut(s) 627, 636, 913
HpyF3I CTNAG 5 cut(s) 439, 632, 951, 1079, 1115
HpySE526I ACGT 3 cut(s) 723, 838, 1096
Hsp92II CATG 1 cut(s) 427
HspAI GCGC 5 cut(s) 611, 613, 639, 893, 995
Kpn2I TCCGGA 1 cut(s) 458
Kzo9I GATC 4 cut(s) 227, 300, 501, 1049
LmnI GCTCC 2 cut(s) 172, 293
Lsp1109I GCAGC 3 cut(s) 336, 447, 1067
LweI GCATC 1 cut(s) 390
MaeI CTAG 5 cut(s) 6, 93, 296, 479, 749
MaeII ACGT 3 cut(s) 723, 838, 1096
MaeIII GTNAC 2 cut(s) 164, 353
MalI GATC 4 cut(s) 229, 302, 503, 1051
MboI GATC 4 cut(s) 227, 300, 501, 1049
MboII GAAGA 8 cut(s) 25, 37, 97, 131, 145, 292, 409, 899
MflI RGATCY 1 cut(s) 227
MhlI GDGCHC 2 cut(s) 290, 665
MluCI AATT 2 cut(s) 1108, 1140
MlyI GAGTC 3 cut(s) 104, 145, 725
MmeI TCCRAC 2 cut(s) 744, 1169
MroI TCCGGA 1 cut(s) 458
MseI TTAA 2 cut(s) 39, 1014
MspCI CTTAAG 1 cut(s) 38
MspI CCGG 7 cut(s) 346, 459, 464, 981, 1019, 1130, 1137
MspR9I CCNGG 5 cut(s) 100, 292, 539, 971, 982
MvaI CCWGG 4 cut(s) 100, 292, 539, 971
MvnI CGCG 2 cut(s) 611, 613
MwoI GCNNNNNNNGC 3 cut(s) 627, 636, 913
NciI CCSGG 1 cut(s) 982
NdeII GATC 4 cut(s) 227, 300, 501, 1049
NlaIII CATG 1 cut(s) 427
NlaIV GGNNCC 1 cut(s) 488
NmuCI GTSAC 1 cut(s) 353
PauI GCGCGC 1 cut(s) 611
PceI AGGCCT 1 cut(s) 949
PfeI GAWTC 1 cut(s) 596
PflFI GACNNNGTC 1 cut(s) 1039
PflMI CCANNNNNTGG 1 cut(s) 377
PfoI TCCNGGA 1 cut(s) 537
PkrI GCNGC 3 cut(s) 351, 437, 1057
PleI GAGTC 3 cut(s) 104, 144, 724
PpsI GAGTC 3 cut(s) 104, 144, 724
PshAI GACNNNNGTC 3 cut(s) 250, 965, 1074
Psp6I CCWGG 4 cut(s) 98, 290, 537, 969
PspGI CCWGG 4 cut(s) 98, 290, 537, 969
PspN4I GGNNCC 1 cut(s) 488
PspPI GGNCC 2 cut(s) 96, 461
PsrI GAACNNNNNNTAC 2 cut(s) 479, 511
PsuI RGATCY 1 cut(s) 227
PsyI GACNNNGTC 1 cut(s) 1039
PteI GCGCGC 1 cut(s) 611
RsaI GTAC 3 cut(s) 497, 728, 776
RsaNI GTAC 3 cut(s) 496, 727, 775
Rsr2I CGGWCCG 1 cut(s) 461
RsrII CGGWCCG 1 cut(s) 461
SaqAI TTAA 2 cut(s) 39, 1014
SatI GCNGC 3 cut(s) 350, 436, 1056
Sau3AI GATC 4 cut(s) 227, 300, 501, 1049
Sau96I GGNCC 2 cut(s) 96, 461
SchI GAGTC 3 cut(s) 104, 145, 725
ScrFI CCNGG 5 cut(s) 100, 292, 539, 971, 982
SduI GDGCHC 2 cut(s) 290, 665
SfaNI GCATC 1 cut(s) 390
SinI GGWCC 1 cut(s) 461
SmlI CTYRAG 2 cut(s) 38, 845
SmoI CTYRAG 2 cut(s) 38, 845
Sse9I AATT 2 cut(s) 1108, 1140
SseBI AGGCCT 1 cut(s) 949
SsiI CCGC 4 cut(s) 659, 740, 762, 1120
SspMI CTAG 5 cut(s) 6, 93, 296, 479, 749
StuI AGGCCT 1 cut(s) 949
StyD4I CCNGG 5 cut(s) 98, 290, 537, 969, 980
StyI CCWWGG 1 cut(s) 616
TaaI ACNGT 2 cut(s) 69, 774
TaiI ACGT 3 cut(s) 726, 841, 1099
TaqI TCGA 5 cut(s) 23, 113, 254, 594, 1068
TasI AATT 2 cut(s) 1108, 1140
TfiI GAWTC 1 cut(s) 596
Tru1I TTAA 2 cut(s) 39, 1014
Tru9I TTAA 2 cut(s) 39, 1014
TscAI CASTG 5 cut(s) 150, 282, 703, 1078, 1108
TseFI GTSAC 1 cut(s) 353
TseI GCWGC 3 cut(s) 349, 435, 1055
Tsp45I GTSAC 1 cut(s) 353
TspDTI ATGAA 2 cut(s) 44, 412
TspRI CASTG 5 cut(s) 150, 282, 703, 1078, 1108
Tth111I GACNNNGTC 1 cut(s) 1039
Van91I CCANNNNNTGG 1 cut(s) 377
Vha464I CTTAAG 1 cut(s) 38
VpaK11BI GGWCC 1 cut(s) 461
XapI RAATTY 1 cut(s) 1140
XbaI TCTAGA 2 cut(s) 5, 748
XcmI CCANNNNNNNNNTGG 1 cut(s) 378
XspI CTAG 5 cut(s) 6, 93, 296, 479, 749
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.