Rroxscaffold_7G00186950

L-type lectin-domain containing receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000688
Physical Location & Seq
Reverse (-)
26283676 .. 26286885
3210 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00186950.1

Sequence Viewer

Length: 2034 bp
ATGGTTTTTTCTCAAAGGTTATCAATCATCTACTTTGTTTTCACCTTTGCCTTAATTTTTGTAGCATCAGCAGCTGATCCTAGGCAATTCCCCTTTACCACATTCAGTGAAAAAACTGACCAATATATATTCCATTTCACGCCTTATTCTTCCATTGATCAAGGGGCACTTCAGTTAACCCCAGACTCAGAGAATGCAGAGGTCAGCTATTCTAACAAGTCCGGCAGGATCATGTACCACAAACCTTATACGCTCTGGTCATCTGACAATGAAGACGATGATGGTGTTGCCTCCTTCAACTCAACTTTCCTCATAAACATCTATCGTGAGAAAGACTGGATTGCTGGTGAGGGGTTTGCTTTTCTTATAGCGTCGGATTGGAACATGCCTGAGCAAAGCTATGGGCAGTGGCTAGGCCTCACCAATGCCGCCACTGATGGTAATGCTACAAACCACATGGTTGCCATAGAATTCGACACAAGAAAGCAAGATTTCGACCCCGATGACAACCATATAGGCCTCAACATCAACTCTGTAAGATCAAGTAAGACTGTTTCTCTTGAGCCTTTCGACATTGAGATATCACCGGAGGTAGGCACCAACTACACCGTGTGGGTGCAATATAATGGCAGCTCAAAAGTCATTGAAGTCTACATGGCTAAGCGCATCATAAACATCCCACCAGTAAGGCCGGAGACACCAGTTATGAGGGAGCCAATAAACTTGAAACAATATCTAAAACAAGACTCCTACTTTGGATTTTCTGGTTCCACAGGTAGCCAGGCTAAACAGCTAAACTGTGTTTTGGAATGGAATCTAGTGGTTCAAGAATTCAAGACCAGAAAGGATATGACTTTGTTGAAGATCGGTGTGCCAGCATTGGTTTTGTTAGTAGTATTTGGTGTTATTTTGGGAGTTGGGTATGTCAAGAAGAGGAAAAGAACCACTCTTGAGGAGTCCATTGTGCTCGGGACACTGAAGAGGTTGCCAGGGATGCCGAGGGAGTTCAAGTACAAAGAGCTCAAGTATGCAACTAATAATTTCCATGCGAGTATGATCCTGGGACAAGGTGGATTTGGCGTTGTTTACAGAGGGACTCTGCGTGATTTTGATGATGCAAATGCTACTAATGAGTCTGCAGAAATTGCTGTCAAGCAATTCTCAAGAGACAACACCAAAGGCAAAGATGATTTCATGGCAGAACTAACCATCATTCACCGCCTTCGCCACAAAAATCTTGTCCGGTTAGTAGGATGGTGCTATGAGAAAGGAAAGCTTCTTTTAGTATATGATTTCATGCCAAATGGTAGCGTTGATAGACACCTATATGAAGCTTCAAACCAGAATACACTCAATTGGGAGCATCGATGCAAGATCCTAGCTGGTGTGGCGTCAGCTTTGCATTATCTGCAAAATGAGTATGATCAAAAAGTGGTGCACCGTGACCTCAAAGCTAGTAACATATTGCTTGACTCTGAGTTCAATGCTCGCCTTGGAGACTTTGGCCTTGCCCGAGCCTTGGAACAAGAGAGGAACTCATATGCTGAACTAGAACTAGCAGGAGTTGCCGGTACCCTGGGCTATGTTGCTCCAGAGTGCTTCCATACAGGGAAGGCTACTCCAGAATCTGATGTTTTCAGTTTCGGGGCGGTTGTGCTTGAAATTGTGTGTGGGAAAAGTCCTGGGATTCAGATTATTCATGGACAACACCAGTTTTCTTTGGTCGATTGGGTGTGGATGTTGCATCGAGAAGGATGTATTGAGGAAGCTGTCGATGAGCGACTGAACAGTAATTACGCGTTGGATGAAGCAAAGAAGCTTTTGCTTCTTGGATTGGCGTGTTCACATCCTATTGCTAGTGAGCGGCCTCAAACACAAGCCATATGCCAGATTATATCCGGAACCATGTCAGTCCCTAGTGTGCCTCCATTCAAGCCTGTTTTCACATGGCCTTCCATGGGTACTGCATATAGCAGCACTGACAGTACAGTTTCTAACGTCACTCTTTCTAGGATCACAGTATCTCTTCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase Pkinase_Tyr

Protein Analysis

677

Amino Acids

76.05

Weight (kDa)

5.8

Isoelectric Point (pI)

40.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 29 - 284 3.3e-65 Legume lectin domain
Pkinase PF00069 349 - 606 1.8e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 352 - 628 7.1e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000688)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09820 FvH4_2g17160 FvH4_2g17160
malus_domestica MD02G1107100.v1.1 MD02G1107300.v1.1 MD05G1144900.v1.1 MD10G1144700.v1.1 MD15G1226500.v1.1
prunus_persica Prupe.7G188700_v2.0.a1 Prupe.7G188700_v2.0.a1 Prupe.7G188700_v2.0.a1 Prupe.8G183000_v2.0.a1
pyrus_communis pycom05g14000 pycom10g12440 pycom15g20140
rosa_chinensis RchiOBHm_Chr2g0096621 RchiOBHm_Chr6g0281601 RchiOBHm_Chr6g0281651 RchiOBHm_Chr7g0212121
rosa_laevigata RLG00000002926 RLG00000002927 RLG00000002933 RLG00000008638 RLG00000012954 RLG00000012955 RLG00000016656
rosa_multiflora Rmu_co8091766.1_g000001 Rmu_co8287847.1_g000001 Rmu_co8297221.1_g000001 Rmu_co8485327.1_g000001 Rmu_co8512767.1_g000001 Rmu_sc0002316.1_g000041 Rmu_sc0003565.1_g000009 Rmu_sc0014556.1_g000004 Rmu_sc0027573.1_g000001 Rmu_sc0030028.1_g000001
rosa_roxburghii Rroxscaffold_1G00026540 Rroxscaffold_2G00145470 Rroxscaffold_3G00247100 Rroxscaffold_3G00247110 Rroxscaffold_3G00247120 Rroxscaffold_5G00362680 Rroxscaffold_5G00362710 Rroxscaffold_7G00186950
rosa_rugosa Rorug02G0059000 Rorug02G0059100 Rorug06G0142300 Rorug07G0131000 Rorug07G0131100
rosa_samantha Rh1DG155700 Rh2AG106500 Rh2AG171500 Rh2BG108800 Rh2BG178900 Rh2CG110600 Rh2CG176400 Rh2DG110100 Rh2DG177600 Rh4BG120600 Rh6BG258300 Rh6CG257100 Rh6DG249200 Rh6DG249300 Rh7AG264100 Rh7AG264200 Rh7BG257800 Rh7BG257900 Rh7BG258000 Rh7BG258100 Rh7CG280600 Rh7CG280700 Rh7DG270600
rosa_wichuraiana Rw2G008240 Rw6G022110 Rw7G022540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1571
AccB1I GGYRCC 2 cut(s) 596, 1571
AccBSI CCGCTC 1 cut(s) 1864
AccI GTMKAC 1 cut(s) 651
AccII CGCG 1 cut(s) 1799
AccIII TCCGGA 1 cut(s) 1898
AciI CCGC 4 cut(s) 429, 1219, 1649, 1864
AclWI GGATC 5 cut(s) 71, 236, 1051, 1369, 2021
AcsI RAATTY 2 cut(s) 470, 830
AcuI CTGAAG 2 cut(s) 155, 998
AcyI GRCGYC 1 cut(s) 1391
AdeI CACNNNGTG 1 cut(s) 612
AfaI GTAC 5 cut(s) 236, 1013, 1573, 1963, 1987
AfiI CCNNNNNNNGG 3 cut(s) 593, 1519, 1958
AflIII ACRYGT 1 cut(s) 1797
AjnI CCWGG 5 cut(s) 780, 988, 1059, 1575, 1681
Alw21I GWGCWC 3 cut(s) 969, 1023, 1440
Alw26I GTCTC 3 cut(s) 689, 1161, 1491
Alw44I GTGCAC 1 cut(s) 1436
AlwI GGATC 5 cut(s) 71, 236, 1051, 1369, 2021
AlwNI CAGNNNCTG 2 cut(s) 74, 1628
Ama87I CYCGRG 2 cut(s) 968, 1512
Aor13HI TCCGGA 1 cut(s) 1898
AoxI GGCC 6 cut(s) 415, 517, 689, 1504, 1865, 1949
ApaLI GTGCAC 1 cut(s) 1436
ApeKI GCWGC 3 cut(s) 71, 630, 1974
ApoI RAATTY 2 cut(s) 470, 830
ArsI GACNNNNNNTTYG 4 cut(s) 737, 769, 1224, 1256
Asp718I GGTACC 1 cut(s) 1571
AspA2I CCTAGG 1 cut(s) 80
AspLEI GCGC 1 cut(s) 666
AsuHPI GGTGA 5 cut(s) 34, 359, 412, 576, 1208
AvaI CYCGRG 2 cut(s) 968, 1512
AvrII CCTAGG 1 cut(s) 80
BaeGI GKGCMC 2 cut(s) 169, 1440
BanI GGYRCC 2 cut(s) 596, 1571
BanII GRGCYC 1 cut(s) 1023
BbsI GAAGAC 1 cut(s) 279
Bbv12I GWGCWC 3 cut(s) 969, 1023, 1440
BbvI GCAGC 3 cut(s) 83, 642, 1986
BccI CCATC 4 cut(s) 275, 431, 1217, 1248
BciT130I CCWGG 5 cut(s) 782, 990, 1061, 1577, 1683
BclI TGATCA 2 cut(s) 157, 1423
BcoDI GTCTC 3 cut(s) 689, 1161, 1491
BfmI CTRYAG 1 cut(s) 1137
BisI GCNGC 5 cut(s) 72, 429, 631, 1865, 1975
BlnI CCTAGG 1 cut(s) 80
BlpI GCTNAGC 1 cut(s) 660
BlsI GCNGC 5 cut(s) 73, 430, 632, 1866, 1976
Bme1390I CCNGG 5 cut(s) 782, 990, 1061, 1577, 1683
BmeT110I CYCGRG 2 cut(s) 968, 1512
BmiI GGNNCC 5 cut(s) 598, 714, 769, 1573, 1903
BmrFI CCNGG 5 cut(s) 782, 990, 1061, 1577, 1683
BmsI GCATC 7 cut(s) 74, 675, 984, 1105, 1358, 1372, 1753
BpiI GAAGAC 1 cut(s) 279
BplI GAGNNNNNCTC 2 cut(s) 1520, 1552
BpmI CTGGAG 2 cut(s) 1575, 1605
Bpu10I CCTNAGC 1 cut(s) 390
Bpu1102I GCTNAGC 1 cut(s) 660
BpuEI CTTGAG 4 cut(s) 581, 971, 1007, 1147
Bsa29I ATCGAT 1 cut(s) 1366
BsaHI GRCGYC 1 cut(s) 1391
BsaWI WCCGGW 3 cut(s) 586, 1242, 1898
BsaXI ACNNNNNCTCC 2 cut(s) 995, 1025
Bsc4I CCNNNNNNNGG 3 cut(s) 593, 1519, 1958
Bse118I RCCGGY 1 cut(s) 1568
Bse1I ACTGG 4 cut(s) 341, 683, 701, 1711
BseAI TCCGGA 1 cut(s) 1898
BseBI CCWGG 5 cut(s) 782, 990, 1061, 1577, 1683
BseCI ATCGAT 1 cut(s) 1366
BseGI GGATG 7 cut(s) 675, 999, 1259, 1743, 1760, 1810, 1846
BseLI CCNNNNNNNGG 3 cut(s) 593, 1519, 1958
BseMII CTCAG 3 cut(s) 201, 381, 1467
BseNI ACTGG 4 cut(s) 341, 683, 701, 1711
BseRI GAGGAG 1 cut(s) 968
BseSI GKGCMC 2 cut(s) 169, 1440
BseXI GCAGC 3 cut(s) 83, 642, 1986
Bsh1236I CGCG 1 cut(s) 1799
BshFI GGCC 6 cut(s) 417, 519, 691, 1506, 1867, 1951
BshNI GGYRCC 2 cut(s) 596, 1571
BshVI ATCGAT 1 cut(s) 1366
BsiHKAI GWGCWC 3 cut(s) 969, 1023, 1440
BsiHKCI CYCGRG 2 cut(s) 968, 1512
BsiSI CCGG 6 cut(s) 222, 587, 692, 1243, 1569, 1899
BslFI GGGAC 4 cut(s) 985, 1077, 1108, 1898
BslI CCNNNNNNNGG 3 cut(s) 593, 1519, 1958
BsmAI GTCTC 3 cut(s) 689, 1161, 1491
BsmFI GGGAC 4 cut(s) 985, 1077, 1108, 1898
BsmI GAATGC 1 cut(s) 199
BsnI GGCC 6 cut(s) 417, 519, 691, 1506, 1867, 1951
BsoBI CYCGRG 2 cut(s) 968, 1512
Bsp1286I GDGCHC 4 cut(s) 169, 969, 1023, 1440
Bsp13I TCCGGA 1 cut(s) 1898
Bsp143I GATC 9 cut(s) 76, 157, 228, 539, 864, 1056, 1374, 1423, 2013
Bsp1720I GCTNAGC 1 cut(s) 660
Bsp19I CCATGG 1 cut(s) 1956
BspACI CCGC 4 cut(s) 429, 1219, 1649, 1864
BspANI GGCC 6 cut(s) 417, 519, 691, 1506, 1867, 1951
BspCNI CTCAG 3 cut(s) 200, 382, 1468
BspDI ATCGAT 1 cut(s) 1366
BspEI TCCGGA 1 cut(s) 1898
BspFNI CGCG 1 cut(s) 1799
BspLI GGNNCC 5 cut(s) 598, 714, 769, 1573, 1903
BspMAI CTGCAG 1 cut(s) 1141
BspPI GGATC 5 cut(s) 71, 236, 1051, 1369, 2021
BspT107I GGYRCC 2 cut(s) 596, 1571
BsrBI CCGCTC 1 cut(s) 1864
BsrFI RCCGGY 1 cut(s) 1568
BsrI ACTGG 4 cut(s) 341, 683, 701, 1711
BssAI RCCGGY 1 cut(s) 1568
BssMI GATC 9 cut(s) 76, 157, 228, 539, 864, 1056, 1374, 1423, 2013
BssNI GRCGYC 1 cut(s) 1391
BssT1I CCWWGG 4 cut(s) 80, 1492, 1518, 1956
Bst2UI CCWGG 5 cut(s) 782, 990, 1061, 1577, 1683
Bst4CI ACNGT 8 cut(s) 553, 610, 800, 1442, 1790, 1985, 1990, 2020
Bst6I CTCTTC 3 cut(s) 926, 974, 2031
BstACI GRCGYC 1 cut(s) 1391
BstAPI GCANNNNNTGC 3 cut(s) 1145, 1408, 1565
BstC8I GCNNGC 2 cut(s) 876, 1489
BstDEI CTNAG 5 cut(s) 187, 390, 660, 1476, 2031
BstDSI CCRYGG 1 cut(s) 1956
BstF5I GGATG 7 cut(s) 675, 999, 1259, 1743, 1760, 1810, 1846
BstFNI CGCG 1 cut(s) 1799
BstHHI GCGC 1 cut(s) 666
BstKTI GATC 9 cut(s) 79, 160, 231, 542, 867, 1059, 1377, 1426, 2016
BstMAI GTCTC 3 cut(s) 689, 1161, 1491
BstMBI GATC 9 cut(s) 76, 157, 228, 539, 864, 1056, 1374, 1423, 2013
BstMWI GCNNNNNNNGC 6 cut(s) 71, 994, 1145, 1388, 1408, 1565
BstNI CCWGG 5 cut(s) 782, 990, 1061, 1577, 1683
BstNSI RCATGY 1 cut(s) 388
BstSCI CCNGG 5 cut(s) 780, 988, 1059, 1575, 1681
BstSFI CTRYAG 1 cut(s) 1137
BstSLI GKGCMC 2 cut(s) 169, 1440
BstUI CGCG 1 cut(s) 1799
BstV1I GCAGC 3 cut(s) 83, 642, 1986
BstV2I GAAGAC 1 cut(s) 279
BstX2I RGATCY 1 cut(s) 1374
BstYI RGATCY 1 cut(s) 1374
Bsu15I ATCGAT 1 cut(s) 1366
BsuRI GGCC 6 cut(s) 417, 519, 691, 1506, 1867, 1951
BsuTUI ATCGAT 1 cut(s) 1366
BtgI CCRYGG 1 cut(s) 1956
BtsCI GGATG 7 cut(s) 675, 999, 1259, 1743, 1760, 1810, 1846
BtsI GCAGTG 1 cut(s) 413
BtsIMutI CAGTG 5 cut(s) 112, 413, 432, 974, 1977
Cac8I GCNNGC 2 cut(s) 876, 1489
CaiI CAGNNNCTG 2 cut(s) 74, 1628
CfoI GCGC 1 cut(s) 666
Cfr10I RCCGGY 1 cut(s) 1568
ClaI ATCGAT 1 cut(s) 1366
CseI GACGC 2 cut(s) 360, 1380
Csp6I GTAC 5 cut(s) 235, 1012, 1572, 1962, 1986
CviQI GTAC 5 cut(s) 235, 1012, 1572, 1962, 1986
DdeI CTNAG 5 cut(s) 187, 390, 660, 1476, 2031
DpnI GATC 9 cut(s) 78, 159, 230, 541, 866, 1058, 1376, 1425, 2015
DpnII GATC 9 cut(s) 76, 157, 228, 539, 864, 1056, 1374, 1423, 2013
DraIII CACNNNGTG 1 cut(s) 612
Eam1104I CTCTTC 3 cut(s) 926, 974, 2031
EarI CTCTTC 3 cut(s) 926, 974, 2031
Ecl136II GAGCTC 1 cut(s) 1021
Eco130I CCWWGG 4 cut(s) 80, 1492, 1518, 1956
Eco147I AGGCCT 2 cut(s) 417, 519
Eco24I GRGCYC 1 cut(s) 1023
Eco32I GATATC 1 cut(s) 582
Eco53kI GAGCTC 1 cut(s) 1021
Eco57I CTGAAG 2 cut(s) 155, 998
Eco88I CYCGRG 2 cut(s) 968, 1512
EcoICRI GAGCTC 1 cut(s) 1021
EcoRI GAATTC 2 cut(s) 470, 830
EcoRII CCWGG 5 cut(s) 780, 988, 1059, 1575, 1681
EcoRV GATATC 1 cut(s) 582
EcoT14I CCWWGG 4 cut(s) 80, 1492, 1518, 1956
EcoT38I GRGCYC 1 cut(s) 1023
ErhI CCWWGG 4 cut(s) 80, 1492, 1518, 1956
FalI AAGNNNNNCTT 4 cut(s) 153, 185, 1260, 1292
FaqI GGGAC 4 cut(s) 985, 1077, 1108, 1898
FauNDI CATATG 2 cut(s) 1540, 1883
FbaI TGATCA 2 cut(s) 157, 1423
FblI GTMKAC 1 cut(s) 651
Fnu4HI GCNGC 5 cut(s) 72, 429, 631, 1865, 1975
FokI GGATG 7 cut(s) 662, 1006, 1266, 1750, 1767, 1817, 1833
FriOI GRGCYC 1 cut(s) 1023
Fsp4HI GCNGC 5 cut(s) 72, 429, 631, 1865, 1975
GlaI GCGC 1 cut(s) 665
GluI GCNGC 5 cut(s) 72, 429, 631, 1865, 1975
GsuI CTGGAG 2 cut(s) 1575, 1605
HaeIII GGCC 6 cut(s) 417, 519, 691, 1506, 1867, 1951
HapII CCGG 6 cut(s) 222, 587, 692, 1243, 1569, 1899
HgaI GACGC 2 cut(s) 360, 1380
HhaI GCGC 1 cut(s) 666
Hin1I GRCGYC 1 cut(s) 1391
Hin6I GCGC 1 cut(s) 664
HinP1I GCGC 1 cut(s) 664
HincII GTYRAC 1 cut(s) 177
HindII GTYRAC 1 cut(s) 177
HindIII AAGCTT 3 cut(s) 1274, 1332, 1817
HinfI GANTC 9 cut(s) 185, 746, 814, 956, 1096, 1133, 1472, 1625, 1687
HpaI GTTAAC 1 cut(s) 177
HpaII CCGG 6 cut(s) 222, 587, 692, 1243, 1569, 1899
HphI GGTGA 5 cut(s) 34, 359, 412, 576, 1208
Hpy166II GTNNAC 5 cut(s) 177, 652, 1087, 1438, 1844
Hpy188I TCNGA 6 cut(s) 190, 265, 376, 1477, 1630, 1692
Hpy8I GTNNAC 5 cut(s) 177, 652, 1087, 1438, 1844
Hpy99I CGWCG 1 cut(s) 376
HpyAV CCTTC 5 cut(s) 304, 1232, 1606, 1745, 1962
HpyCH4III ACNGT 8 cut(s) 553, 610, 800, 1442, 1790, 1985, 1990, 2020
HpyCH4IV ACGT 1 cut(s) 1998
HpyF10VI GCNNNNNNNGC 6 cut(s) 71, 994, 1145, 1388, 1408, 1565
HpyF3I CTNAG 5 cut(s) 187, 390, 660, 1476, 2031
HpySE526I ACGT 1 cut(s) 1998
Hsp92I GRCGYC 1 cut(s) 1391
HspAI GCGC 1 cut(s) 664
Kpn2I TCCGGA 1 cut(s) 1898
KpnI GGTACC 1 cut(s) 1575
Ksp22I TGATCA 2 cut(s) 157, 1423
KspAI GTTAAC 1 cut(s) 177
Kzo9I GATC 9 cut(s) 76, 157, 228, 539, 864, 1056, 1374, 1423, 2013
LmnI GCTCC 3 cut(s) 712, 1360, 1594
Lsp1109I GCAGC 3 cut(s) 83, 642, 1986
LweI GCATC 7 cut(s) 74, 675, 984, 1105, 1358, 1372, 1753
MaeII ACGT 1 cut(s) 1998
MaeIII GTNAC 3 cut(s) 1442, 1457, 1999
MalI GATC 9 cut(s) 78, 159, 230, 541, 866, 1058, 1376, 1425, 2015
MbiI CCGCTC 1 cut(s) 1864
MboI GATC 9 cut(s) 76, 157, 228, 539, 864, 1056, 1374, 1423, 2013
MboII GAAGA 6 cut(s) 141, 284, 874, 943, 991, 2018
MfeI CAATTG 1 cut(s) 1354
MflI RGATCY 1 cut(s) 1374
MhlI GDGCHC 4 cut(s) 169, 969, 1023, 1440
MluI ACGCGT 1 cut(s) 1797
MlyI GAGTC 6 cut(s) 179, 740, 965, 1090, 1142, 1466
MmeI TCCRAC 2 cut(s) 354, 1782
MroI TCCGGA 1 cut(s) 1898
MseI TTAA 2 cut(s) 53, 176
MslI CAYNNNNRTG 1 cut(s) 1326
MspA1I CMGCKG 1 cut(s) 74
MspI CCGG 6 cut(s) 222, 587, 692, 1243, 1569, 1899
MspR9I CCNGG 5 cut(s) 782, 990, 1061, 1577, 1683
MunI CAATTG 1 cut(s) 1354
Mva1269I GAATGC 1 cut(s) 199
MvaI CCWGG 5 cut(s) 782, 990, 1061, 1577, 1683
MvnI CGCG 1 cut(s) 1799
MwoI GCNNNNNNNGC 6 cut(s) 71, 994, 1145, 1388, 1408, 1565
NcoI CCATGG 1 cut(s) 1956
NdeI CATATG 2 cut(s) 1540, 1883
NdeII GATC 9 cut(s) 76, 157, 228, 539, 864, 1056, 1374, 1423, 2013
NlaIV GGNNCC 5 cut(s) 598, 714, 769, 1573, 1903
NmeAIII GCCGAG 1 cut(s) 1023
NmuCI GTSAC 2 cut(s) 1442, 1999
NspI RCATGY 1 cut(s) 388
PasI CCCWGGG 1 cut(s) 1576
PceI AGGCCT 2 cut(s) 417, 519
PctI GAATGC 1 cut(s) 199
PfeI GAWTC 3 cut(s) 814, 1625, 1687
PkrI GCNGC 5 cut(s) 73, 430, 632, 1866, 1976
PleI GAGTC 6 cut(s) 179, 740, 964, 1090, 1141, 1466
PpsI GAGTC 6 cut(s) 179, 740, 964, 1090, 1141, 1466
Psp124BI GAGCTC 1 cut(s) 1023
Psp6I CCWGG 5 cut(s) 780, 988, 1059, 1575, 1681
PspGI CCWGG 5 cut(s) 780, 988, 1059, 1575, 1681
PspN4I GGNNCC 5 cut(s) 598, 714, 769, 1573, 1903
PsrI GAACNNNNNNTAC 2 cut(s) 1778, 1810
PstI CTGCAG 1 cut(s) 1141
PstNI CAGNNNCTG 2 cut(s) 74, 1628
PsuI RGATCY 1 cut(s) 1374
PvuII CAGCTG 1 cut(s) 74
RsaI GTAC 5 cut(s) 236, 1013, 1573, 1963, 1987
RsaNI GTAC 5 cut(s) 235, 1012, 1572, 1962, 1986
RseI CAYNNNNRTG 1 cut(s) 1326
SacI GAGCTC 1 cut(s) 1023
SaqAI TTAA 2 cut(s) 53, 176
SatI GCNGC 5 cut(s) 72, 429, 631, 1865, 1975
Sau3AI GATC 9 cut(s) 76, 157, 228, 539, 864, 1056, 1374, 1423, 2013
SchI GAGTC 6 cut(s) 179, 740, 965, 1090, 1142, 1466
ScrFI CCNGG 5 cut(s) 782, 990, 1061, 1577, 1683
SduI GDGCHC 4 cut(s) 169, 969, 1023, 1440
SfaNI GCATC 7 cut(s) 74, 675, 984, 1105, 1358, 1372, 1753
SfcI CTRYAG 1 cut(s) 1137
SmiMI CAYNNNNRTG 1 cut(s) 1326
SmlI CTYRAG 4 cut(s) 560, 950, 1022, 1162
SmoI CTYRAG 4 cut(s) 560, 950, 1022, 1162
SseBI AGGCCT 2 cut(s) 417, 519
SsiI CCGC 4 cut(s) 429, 1219, 1649, 1864
SstI GAGCTC 1 cut(s) 1023
StuI AGGCCT 2 cut(s) 417, 519
StyD4I CCNGG 5 cut(s) 780, 988, 1059, 1575, 1681
StyI CCWWGG 4 cut(s) 80, 1492, 1518, 1956
TaaI ACNGT 8 cut(s) 553, 610, 800, 1442, 1790, 1985, 1990, 2020
TaiI ACGT 1 cut(s) 2001
TaqI TCGA 7 cut(s) 474, 495, 570, 1366, 1725, 1747, 1773
TatI WGTACW 2 cut(s) 1011, 1985
TauI GCSGC 2 cut(s) 431, 1867
TfiI GAWTC 3 cut(s) 814, 1625, 1687
Tru1I TTAA 2 cut(s) 53, 176
Tru9I TTAA 2 cut(s) 53, 176
TscAI CASTG 5 cut(s) 112, 413, 439, 981, 1984
TseFI GTSAC 2 cut(s) 1442, 1999
TseI GCWGC 3 cut(s) 71, 630, 1974
Tsp45I GTSAC 2 cut(s) 1442, 1999
TspDTI ATGAA 6 cut(s) 285, 1183, 1285, 1344, 1688, 1821
TspRI CASTG 5 cut(s) 112, 413, 439, 981, 1984
VneI GTGCAC 1 cut(s) 1436
XapI RAATTY 2 cut(s) 470, 830
XceI RCATGY 1 cut(s) 388
XmaJI CCTAGG 1 cut(s) 80
XmiI GTMKAC 1 cut(s) 651
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.