FvH4_1g27601

BAHD acyltransferase At5g47980-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Forward (+)
19246371 .. 19253258
6888 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g27601.t1

Sequence Viewer

Length: 1305 bp
ATGGGTATGCTATCAGCTGTGTATTCACGAATGGGGGATGAGGCTTCCACTGTTTCAGAGAGCTTGCAAGCATCTCTTTCCCAAGCCTTGGTTCTCTTCTATCCACTTGCCGGCCGACTCAAAACCGCTGCCTCTGTCGACTGCAACGACCAAGGAGCTCATTTTCTCGAGGCCCGAGTTAACTGCCACCTCTCGGATTTGCTCAAAGTTCCCCAGCACAAGTTGCTTAACAACCTTATCCCCGAGTTTGAGCCTAAAACAGTTGAGTTCGCGTTGGGTTCAGTTGTTTTGATCGTTCAAGTGAGTCTTTTCAAGTGTGGAGGAGTCGCTGTTGCTGCGTCGCCGATACACAAGATCGGGGATACCGGCGGATATTACAATTTTTTACAAACATGGGCTGCCATACACCGTGGTGAAACCGATCAACTAGCGCTGCCTGAGTTTAATGGAGCATCTATTGCTAGTCTCAAGGCAAAAATCGGAGGTACAAACGTAGAACTTGTTTCGGCAATCATCCTCAGAAGTGCTCTTGTTGCTTGTCATAGATCGAAGCCGGAGACTGCTTCAGGGACAACTGTGTTTTCCCAAATTGTAAGTTTCGGCAATAGAATAGTCCCGGCTGTGGCGCCAAACGTGATGGGAAACTGGTTTTGGTCGGTTCAAGTGATATTCAAGGAAAACGAGACGGAACTACAGGAGTTGGTGGCTAAGATGAGGAAAGGAGTAACAGAGTTCAACAAGGAGAAGGCGCACAGATTCAAAGGCGAAGATGGATACAGGGTTGTGTCCGAGTCGCTTAGAGAGAGGAGAGAGTTGTTTAAGAGCACAAAGGGGTGCATCAATCTTTATAGGGGTACAAGTTTGTGCAAGCTCCCCATATATGAGCTCGATTTTGGTTGGGGGAAGCCGACATGGGAAGAAATGGCTATATTTGAGAGTGAAGAGGAGCTCCTTTCATTTGTATCTGCAAACCCTAGCGCAATTGTTCTCATTCTCTTGAATCACGAATTTGCCATCGCTGCCGCTCTTTTCTCCCCCTTTCTCTATTGGCTGCAATTCATTTATATCAGCAGACCGTTGCTTATCGAATCAACATCGGTCATCGTCGACATCTCAACATTTCCTTTGCGCATAACCAGACCTGATCTCACCACCGCTTCACAGTCAGATTTGCTCGAAGGAAAGGGGAGCCGTTCTTGCTTTGGAGGCTCTCCAAATCTTTGGCTGCTGCGTGTCAGAATTTGGTTGGGAAAAGAAGCCATCTGGGATCAACCATACTGTTACCGGTCAATAGAAGCTAACTAA

Protein Analysis

435

Amino Acids

48.1

Weight (kDa)

6.48

Isoelectric Point (pI)

39.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 16 - 154 4.8e-32 Transferase family
Transferase PF02458 161 - 316 9.3e-13 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1130
AccB1I GGYRCC 1 cut(s) 625
AccB7I CCANNNNNTGG 1 cut(s) 88
AccBSI CCGCTC 1 cut(s) 1025
AccI GTMKAC 2 cut(s) 138, 1107
AccII CGCG 1 cut(s) 272
AciI CCGC 4 cut(s) 126, 369, 1023, 1155
AclWI GGATC 1 cut(s) 1275
AcoI YGGCCR 1 cut(s) 112
AcsI RAATTY 2 cut(s) 1007, 1239
AcuI CTGAAG 1 cut(s) 549
AcyI GRCGYC 1 cut(s) 626
AfaI GTAC 2 cut(s) 487, 856
AfeI AGCGCT 1 cut(s) 432
AfiI CCNNNNNNNGG 4 cut(s) 88, 110, 193, 622
AgeI ACCGGT 1 cut(s) 1284
AgsI TTSAA 7 cut(s) 299, 313, 662, 673, 736, 760, 1000
AjuI GAANNNNNNNTTGG 4 cut(s) 75, 107, 634, 666
AleI CACNNNNGTG 1 cut(s) 411
AluBI AGCT 7 cut(s) 17, 63, 158, 871, 886, 949, 1298
AluI AGCT 7 cut(s) 17, 63, 158, 871, 886, 949, 1298
Alw21I GWGCWC 5 cut(s) 160, 529, 827, 888, 951
Alw26I GTCTC 3 cut(s) 470, 551, 677
AlwI GGATC 1 cut(s) 1275
Ama87I CYCGRG 3 cut(s) 167, 174, 242
Aor51HI AGCGCT 1 cut(s) 432
AoxI GGCC 2 cut(s) 112, 171
ApeKI GCWGC 8 cut(s) 128, 335, 398, 433, 1019, 1051, 1225, 1228
ApoI RAATTY 2 cut(s) 1007, 1239
AsiGI ACCGGT 1 cut(s) 1284
AspLEI GCGC 5 cut(s) 433, 628, 751, 980, 1131
AspS9I GGNCC 1 cut(s) 172
AsuC2I CCSGG 1 cut(s) 617
AsuHPI GGTGA 2 cut(s) 425, 1141
AvaI CYCGRG 3 cut(s) 167, 174, 242
BaeI ACNNNNGTAYC 2 cut(s) 477, 510
BanI GGYRCC 1 cut(s) 625
BanII GRGCYC 3 cut(s) 160, 888, 951
Bbv12I GWGCWC 5 cut(s) 160, 529, 827, 888, 951
BbvI GCAGC 8 cut(s) 115, 322, 385, 420, 1006, 1038, 1212, 1215
BccI CCATC 4 cut(s) 631, 764, 1022, 1268
BceAI ACGGC 1 cut(s) 1176
BcgI CGANNNNNNTGC 2 cut(s) 165, 199
BciVI GTATCC 2 cut(s) 355, 767
BcnI CCSGG 1 cut(s) 617
BcoDI GTCTC 3 cut(s) 470, 551, 677
BfaI CTAG 3 cut(s) 428, 462, 975
BfmI CTRYAG 1 cut(s) 692
BfoI RGCGCY 2 cut(s) 434, 629
BfuI GTATCC 2 cut(s) 355, 767
BisI GCNGC 9 cut(s) 129, 336, 399, 434, 1020, 1023, 1052, 1226, 1229
BlsI GCNGC 9 cut(s) 130, 337, 400, 435, 1021, 1024, 1053, 1227, 1230
Bme1390I CCNGG 1 cut(s) 617
BmeT110I CYCGRG 3 cut(s) 167, 174, 242
BmgT120I GGNCC 1 cut(s) 172
BmiI GGNNCC 2 cut(s) 627, 1190
BmrFI CCNGG 1 cut(s) 617
BmsI GCATC 3 cut(s) 80, 461, 846
BpuEI CTTGAG 1 cut(s) 452
BpuMI CCSGG 1 cut(s) 617
BsaHI GRCGYC 1 cut(s) 626
BsaJI CCNNGG 3 cut(s) 87, 151, 409
BsaWI WCCGGW 1 cut(s) 1284
BsaXI ACNNNNNCTCC 2 cut(s) 315, 345
Bsc4I CCNNNNNNNGG 4 cut(s) 88, 110, 193, 622
Bse118I RCCGGY 3 cut(s) 110, 365, 1284
Bse1I ACTGG 1 cut(s) 650
BseDI CCNNGG 3 cut(s) 87, 151, 409
BseGI GGATG 2 cut(s) 43, 513
BseLI CCNNNNNNNGG 4 cut(s) 88, 110, 193, 622
BseMII CTCAG 2 cut(s) 429, 532
BseNI ACTGG 1 cut(s) 650
BseRI GAGGAG 3 cut(s) 336, 820, 959
BseX3I CGGCCG 1 cut(s) 112
BseXI GCAGC 8 cut(s) 115, 322, 385, 420, 1006, 1038, 1212, 1215
BseYI CCCAGC 1 cut(s) 213
Bsh1236I CGCG 1 cut(s) 272
Bsh1285I CGRYCG 1 cut(s) 115
BshFI GGCC 2 cut(s) 114, 173
BshNI GGYRCC 1 cut(s) 625
BshTI ACCGGT 1 cut(s) 1284
BsiEI CGRYCG 1 cut(s) 115
BsiHKAI GWGCWC 5 cut(s) 160, 529, 827, 888, 951
BsiHKCI CYCGRG 3 cut(s) 167, 174, 242
BsiSI CCGG 5 cut(s) 111, 366, 554, 617, 1285
BslFI GGGAC 2 cut(s) 583, 599
BslI CCNNNNNNNGG 4 cut(s) 88, 110, 193, 622
BsmAI GTCTC 3 cut(s) 470, 551, 677
BsmBI CGTCTC 1 cut(s) 677
BsmFI GGGAC 2 cut(s) 583, 599
BsnI GGCC 2 cut(s) 114, 173
BsoBI CYCGRG 3 cut(s) 167, 174, 242
Bsp1286I GDGCHC 5 cut(s) 160, 529, 827, 888, 951
Bsp143I GATC 6 cut(s) 291, 354, 421, 545, 1144, 1267
BspACI CCGC 4 cut(s) 126, 369, 1023, 1155
BspANI GGCC 2 cut(s) 114, 173
BspCNI CTCAG 2 cut(s) 430, 531
BspFNI CGCG 1 cut(s) 272
BspLI GGNNCC 2 cut(s) 627, 1190
BspPI GGATC 1 cut(s) 1275
BspT107I GGYRCC 1 cut(s) 625
BsrBI CCGCTC 1 cut(s) 1025
BsrFI RCCGGY 3 cut(s) 110, 365, 1284
BsrI ACTGG 1 cut(s) 650
BssAI RCCGGY 3 cut(s) 110, 365, 1284
BssECI CCNNGG 3 cut(s) 87, 151, 409
BssMI GATC 6 cut(s) 291, 354, 421, 545, 1144, 1267
BssNI GRCGYC 1 cut(s) 626
BssT1I CCWWGG 2 cut(s) 87, 151
Bst4CI ACNGT 7 cut(s) 52, 262, 410, 577, 1077, 1164, 1280
Bst6I CTCTTC 2 cut(s) 101, 936
BstACI GRCGYC 1 cut(s) 626
BstAPI GCANNNNNTGC 2 cut(s) 223, 458
BstC8I GCNNGC 4 cut(s) 65, 69, 112, 869
BstDEI CTNAG 4 cut(s) 438, 518, 708, 797
BstDSI CCRYGG 1 cut(s) 409
BstF5I GGATG 2 cut(s) 43, 513
BstFNI CGCG 1 cut(s) 272
BstH2I RGCGCY 2 cut(s) 434, 629
BstHHI GCGC 5 cut(s) 433, 628, 751, 980, 1131
BstKTI GATC 6 cut(s) 294, 357, 424, 548, 1147, 1270
BstMAI GTCTC 3 cut(s) 470, 551, 677
BstMBI GATC 6 cut(s) 291, 354, 421, 545, 1144, 1267
BstMCI CGRYCG 1 cut(s) 115
BstMWI GCNNNNNNNGC 7 cut(s) 223, 335, 458, 533, 1019, 1197, 1206
BstSCI CCNGG 1 cut(s) 615
BstSFI CTRYAG 1 cut(s) 692
BstUI CGCG 1 cut(s) 272
BstV1I GCAGC 8 cut(s) 115, 322, 385, 420, 1006, 1038, 1212, 1215
BstXI CCANNNNNNTGG 1 cut(s) 1221
BstZI CGGCCG 1 cut(s) 112
BsuI GTATCC 2 cut(s) 355, 767
BsuRI GGCC 2 cut(s) 114, 173
BtgI CCRYGG 1 cut(s) 409
BtgZI GCGATG 1 cut(s) 1000
BtsCI GGATG 2 cut(s) 43, 513
BtsIMutI CAGTG 1 cut(s) 48
Cac8I GCNNGC 4 cut(s) 65, 69, 112, 869
CfoI GCGC 5 cut(s) 433, 628, 751, 980, 1131
Cfr10I RCCGGY 3 cut(s) 110, 365, 1284
Cfr13I GGNCC 1 cut(s) 172
CseI GACGC 1 cut(s) 327
Csp6I GTAC 2 cut(s) 486, 855
CspAI ACCGGT 1 cut(s) 1284
CviAII CATG 2 cut(s) 393, 912
CviQI GTAC 2 cut(s) 486, 855
DdeI CTNAG 4 cut(s) 438, 518, 708, 797
DinI GGCGCC 1 cut(s) 627
DpnI GATC 6 cut(s) 293, 356, 423, 547, 1146, 1269
DpnII GATC 6 cut(s) 291, 354, 421, 545, 1144, 1267
EaeI YGGCCR 1 cut(s) 112
EagI CGGCCG 1 cut(s) 112
Eam1104I CTCTTC 2 cut(s) 101, 936
EarI CTCTTC 2 cut(s) 101, 936
EciI GGCGGA 1 cut(s) 384
Ecl136II GAGCTC 3 cut(s) 158, 886, 949
EclXI CGGCCG 1 cut(s) 112
Eco130I CCWWGG 2 cut(s) 87, 151
Eco24I GRGCYC 3 cut(s) 160, 888, 951
Eco47III AGCGCT 1 cut(s) 432
Eco52I CGGCCG 1 cut(s) 112
Eco53kI GAGCTC 3 cut(s) 158, 886, 949
Eco57I CTGAAG 1 cut(s) 549
Eco88I CYCGRG 3 cut(s) 167, 174, 242
EcoICRI GAGCTC 3 cut(s) 158, 886, 949
EcoT14I CCWWGG 2 cut(s) 87, 151
EcoT38I GRGCYC 3 cut(s) 160, 888, 951
EgeI GGCGCC 1 cut(s) 627
EheI GGCGCC 1 cut(s) 627
ErhI CCWWGG 2 cut(s) 87, 151
Esp3I CGTCTC 1 cut(s) 677
FaeI CATG 2 cut(s) 396, 915
FalI AAGNNNNNCTT 4 cut(s) 60, 92, 291, 323
FaqI GGGAC 2 cut(s) 583, 599
FatI CATG 2 cut(s) 392, 911
FblI GTMKAC 2 cut(s) 138, 1107
Fnu4HI GCNGC 9 cut(s) 129, 336, 399, 434, 1020, 1023, 1052, 1226, 1229
FokI GGATG 2 cut(s) 50, 500
FriOI GRGCYC 3 cut(s) 160, 888, 951
Fsp4HI GCNGC 9 cut(s) 129, 336, 399, 434, 1020, 1023, 1052, 1226, 1229
FspBI CTAG 3 cut(s) 428, 462, 975
FspI TGCGCA 1 cut(s) 1130
GlaI GCGC 5 cut(s) 432, 627, 750, 979, 1130
GluI GCNGC 9 cut(s) 129, 336, 399, 434, 1020, 1023, 1052, 1226, 1229
GsaI CCCAGC 1 cut(s) 217
HaeII RGCGCY 2 cut(s) 434, 629
HaeIII GGCC 2 cut(s) 114, 173
HapII CCGG 5 cut(s) 111, 366, 554, 617, 1285
HgaI GACGC 1 cut(s) 327
HhaI GCGC 5 cut(s) 433, 628, 751, 980, 1131
Hin1I GRCGYC 1 cut(s) 626
Hin1II CATG 2 cut(s) 396, 915
Hin6I GCGC 5 cut(s) 431, 626, 749, 978, 1129
HinP1I GCGC 5 cut(s) 431, 626, 749, 978, 1129
HincII GTYRAC 3 cut(s) 139, 181, 1108
HindII GTYRAC 3 cut(s) 139, 181, 1108
HinfI GANTC 7 cut(s) 117, 304, 324, 756, 791, 1000, 1088
HpaI GTTAAC 1 cut(s) 181
HpaII CCGG 5 cut(s) 111, 366, 554, 617, 1285
HphI GGTGA 2 cut(s) 425, 1141
Hpy166II GTNNAC 3 cut(s) 139, 181, 1108
Hpy188I TCNGA 7 cut(s) 58, 196, 482, 521, 790, 1168, 1238
Hpy188III TCNNGA 4 cut(s) 27, 167, 997, 1004
Hpy8I GTNNAC 3 cut(s) 139, 181, 1108
Hpy99I CGWCG 2 cut(s) 343, 1109
HpyAV CCTTC 2 cut(s) 739, 1172
HpyCH4III ACNGT 7 cut(s) 52, 262, 410, 577, 1077, 1164, 1280
HpyCH4IV ACGT 2 cut(s) 492, 633
HpyCH4V TGCA 6 cut(s) 67, 144, 837, 867, 968, 1054
HpyF10VI GCNNNNNNNGC 7 cut(s) 223, 335, 458, 533, 1019, 1197, 1206
HpyF3I CTNAG 4 cut(s) 438, 518, 708, 797
HpySE526I ACGT 2 cut(s) 492, 633
Hsp92I GRCGYC 1 cut(s) 626
Hsp92II CATG 2 cut(s) 396, 915
HspAI GCGC 5 cut(s) 431, 626, 749, 978, 1129
KasI GGCGCC 1 cut(s) 625
KroI GCCGGC 1 cut(s) 110
KroNI GCCGGC 1 cut(s) 112
KspAI GTTAAC 1 cut(s) 181
Kzo9I GATC 6 cut(s) 291, 354, 421, 545, 1144, 1267
LmnI GCTCC 6 cut(s) 155, 449, 876, 946, 954, 1188
Lsp1109I GCAGC 8 cut(s) 115, 322, 385, 420, 1006, 1038, 1212, 1215
LweI GCATC 3 cut(s) 80, 461, 846
MaeI CTAG 3 cut(s) 428, 462, 975
MaeII ACGT 2 cut(s) 492, 633
MaeIII GTNAC 2 cut(s) 724, 1280
MalI GATC 6 cut(s) 293, 356, 423, 547, 1146, 1269
MbiI CCGCTC 1 cut(s) 1025
MboI GATC 6 cut(s) 291, 354, 421, 545, 1144, 1267
MboII GAAGA 4 cut(s) 88, 779, 929, 953
MfeI CAATTG 1 cut(s) 981
MhlI GDGCHC 5 cut(s) 160, 529, 827, 888, 951
MluCI AATT 6 cut(s) 379, 588, 981, 1007, 1055, 1239
Mly113I GGCGCC 1 cut(s) 626
MlyI GAGTC 4 cut(s) 111, 313, 333, 800
MroNI GCCGGC 1 cut(s) 110
MseI TTAA 4 cut(s) 180, 228, 444, 819
MslI CAYNNNNRTG 1 cut(s) 411
MspA1I CMGCKG 2 cut(s) 17, 128
MspI CCGG 5 cut(s) 111, 366, 554, 617, 1285
MspR9I CCNGG 1 cut(s) 617
MunI CAATTG 1 cut(s) 981
MvnI CGCG 1 cut(s) 272
MwoI GCNNNNNNNGC 7 cut(s) 223, 335, 458, 533, 1019, 1197, 1206
NaeI GCCGGC 1 cut(s) 112
NarI GGCGCC 1 cut(s) 626
NciI CCSGG 1 cut(s) 617
NdeII GATC 6 cut(s) 291, 354, 421, 545, 1144, 1267
NgoMIV GCCGGC 1 cut(s) 110
NlaIII CATG 2 cut(s) 396, 915
NlaIV GGNNCC 2 cut(s) 627, 1190
NsbI TGCGCA 1 cut(s) 1130
OliI CACNNNNGTG 1 cut(s) 411
PaeR7I CTCGAG 1 cut(s) 167
PcsI WCGNNNNNNNCGW 1 cut(s) 144
PdiI GCCGGC 1 cut(s) 112
PfeI GAWTC 3 cut(s) 756, 1000, 1088
PflMI CCANNNNNTGG 1 cut(s) 88
PinAI ACCGGT 1 cut(s) 1284
PkrI GCNGC 9 cut(s) 130, 337, 400, 435, 1021, 1024, 1053, 1227, 1230
PleI GAGTC 4 cut(s) 111, 312, 332, 799
PluTI GGCGCC 1 cut(s) 629
PpsI GAGTC 4 cut(s) 111, 312, 332, 799
Psp124BI GAGCTC 3 cut(s) 160, 888, 951
PspFI CCCAGC 1 cut(s) 213
PspN4I GGNNCC 2 cut(s) 627, 1190
PspPI GGNCC 1 cut(s) 172
PvuII CAGCTG 1 cut(s) 17
RsaI GTAC 2 cut(s) 487, 856
RsaNI GTAC 2 cut(s) 486, 855
RseI CAYNNNNRTG 1 cut(s) 411
SacI GAGCTC 3 cut(s) 160, 888, 951
SalI GTCGAC 2 cut(s) 137, 1106
SaqAI TTAA 4 cut(s) 180, 228, 444, 819
SatI GCNGC 9 cut(s) 129, 336, 399, 434, 1020, 1023, 1052, 1226, 1229
Sau3AI GATC 6 cut(s) 291, 354, 421, 545, 1144, 1267
Sau96I GGNCC 1 cut(s) 172
SchI GAGTC 4 cut(s) 111, 313, 333, 800
ScrFI CCNGG 1 cut(s) 617
SduI GDGCHC 5 cut(s) 160, 529, 827, 888, 951
SfaNI GCATC 3 cut(s) 80, 461, 846
SfcI CTRYAG 1 cut(s) 692
SfoI GGCGCC 1 cut(s) 627
Sfr274I CTCGAG 1 cut(s) 167
SlaI CTCGAG 1 cut(s) 167
SmiMI CAYNNNNRTG 1 cut(s) 411
SmlI CTYRAG 2 cut(s) 167, 467
SmoI CTYRAG 2 cut(s) 167, 467
Sse9I AATT 6 cut(s) 379, 588, 981, 1007, 1055, 1239
SsiI CCGC 4 cut(s) 126, 369, 1023, 1155
SspDI GGCGCC 1 cut(s) 625
SspMI CTAG 3 cut(s) 428, 462, 975
SstI GAGCTC 3 cut(s) 160, 888, 951
StyD4I CCNGG 1 cut(s) 615
StyI CCWWGG 2 cut(s) 87, 151
TaaI ACNGT 7 cut(s) 52, 262, 410, 577, 1077, 1164, 1280
TaiI ACGT 2 cut(s) 495, 636
TaqI TCGA 7 cut(s) 138, 168, 548, 888, 1086, 1107, 1176
TaqII GACCGA 1 cut(s) 1087
TasI AATT 6 cut(s) 379, 588, 981, 1007, 1055, 1239
TauI GCSGC 1 cut(s) 1025
TfiI GAWTC 3 cut(s) 756, 1000, 1088
Tru1I TTAA 4 cut(s) 180, 228, 444, 819
Tru9I TTAA 4 cut(s) 180, 228, 444, 819
TscAI CASTG 1 cut(s) 55
TseI GCWGC 8 cut(s) 128, 335, 398, 433, 1019, 1051, 1225, 1228
TspDTI ATGAA 2 cut(s) 945, 1048
TspGWI ACGGA 1 cut(s) 701
TspRI CASTG 1 cut(s) 55
Van91I CCANNNNNTGG 1 cut(s) 88
XapI RAATTY 2 cut(s) 1007, 1239
XhoI CTCGAG 1 cut(s) 167
XmiI GTMKAC 2 cut(s) 138, 1107
XspI CTAG 3 cut(s) 428, 462, 975
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.