MD07G1048300.v1.1

BAHD acyltransferase At5g47980-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Forward (+)
4140866 .. 4142239
1374 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1048300.v1.1.491

Sequence Viewer

Length: 1374 bp
ATGATCAAACCATCCTCTCCAACTCCTAACCACCACAAAAACTTGAAGCTCTCTCTTTTGGACCAAGCATTTCCTCCATCCTTCTATGCAAATACCATTTTCTTCTACTCTTCAGACAGCAACAGCAACCATGGCCATAACTACGGCGGCGACGTCACCTCCCAGCAGCTTGCATGGGAAAGGTCTGACCGATTACAGAAGTCGCTGTCCAAAACCTTGGTTGCTTTCTATCCATTCGCCGGGCAGCTCAAAGACCAAGTCTCCGTTGAGTGTAACGATGAAGGAGCTTATTTTGTAGAAGCCCGAAGTAACTGCAGCCTCCTGGAAATTCTTTCCAAACCCGAACACAAGTTACTTCCCCACTTTATTCCTGCATTCAATGCCGATGAGCAGTTGGGCAGTGCTGTTCTGCTTGTTCAATTCACGGTCTTTAACTGTGGAGGAATTACTCTTGGTGTCTCCCATTCACACAAGATCGCCGACGCATCATCTACATGCACTTTTTTCCAAAGATGGGCAGCCAGTACCCTCGAGTTGGAGTCCGTTAACAACCATGATCGAATCTCTGCAGTTAACAACCATGATCAAATCTCTGCAGTGCTTCCGGAGTTCGTTGGATCATCATTGCTGCCACCTTCGGATATGCCCTTCTCATCCAGCTATGTCATGAACATGGCGCCAGAAAATTTGACCACAAGAAGGTTTGTGTTTAGTGCTCCAAAGATAGCCATCCTCAGTGACAAAATTAGTAGACTTCTTCAACAGTGTGGAATTAATATAACCCCCACAAAAGTGGAAGTTGTATCTGCAGTTTTGTTCAAATGTGCTAATGCTGCGAGGAGATCATCAAATCCTTCGGCAACATTTAAGCAGGCAGTGGACTTACGTCGAAGAATATCTCCTCCGCTGCCGGAGAACGCTATAGGGAATCTGGTCTGGTCGTTTCAACTGTTGGTCGAAAATAAAGACATCAAGTTGCATGAACTGGTTGCTGAGATGAGGAGAGGCTCTGCAGAGTTTTGTAACGAAAAGGCAAATAGGTTGAAGGGTGAAGAGGGTGTGTCTTTGGTTTTTGAGGGCAACAGAGAGGAGTTTGAATTTGGTAAGATGGGAATCCCGATGTATTGTTTTGCAAGCATATGGAGACATCCGATGGATGAAATGGATTTCGGGTGGGGGAAGCCCATTTGGTTCACTTTTCATATGTGCTACAAGAACACTATAATGTTGTTGGCCGGTACTCGAAATGATCAAGATATTGAAGCTTTGGTGACCTTGGAAGAACAAGAGATGACTAGATTTCAACGCGACGAGATGCTTCTTGCAGTTGCTGCCGTGAATCCAAGCGTAGTTGTCAGTCACTGCCGCATGTGA

Protein Analysis

458

Amino Acids

51.23

Weight (kDa)

6.18

Isoelectric Point (pI)

47.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 1 - 438 9.9e-75 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 156
AccB1I GGYRCC 1 cut(s) 676
AccI GTMKAC 1 cut(s) 751
AccII CGCG 1 cut(s) 1308
AccIII TCCGGA 1 cut(s) 604
AciI CCGC 3 cut(s) 147, 905, 1366
AclWI GGATC 1 cut(s) 625
AcoI YGGCCR 2 cut(s) 133, 1233
AcsI RAATTY 3 cut(s) 327, 685, 1097
AcuI CTGAAG 1 cut(s) 96
AcyI GRCGYC 2 cut(s) 153, 677
AfaI GTAC 2 cut(s) 526, 1240
AfiI CCNNNNNNNGG 4 cut(s) 239, 514, 535, 699
AjnI CCWGG 1 cut(s) 321
AleI CACNNNNGTG 1 cut(s) 791
AluBI AGCT 6 cut(s) 49, 169, 247, 287, 660, 1265
AluI AGCT 6 cut(s) 49, 169, 247, 287, 660, 1265
Alw21I GWGCWC 1 cut(s) 718
Alw26I GTCTC 3 cut(s) 265, 463, 1138
AlwI GGATC 1 cut(s) 625
AlwNI CAGNNNCTG 2 cut(s) 1331, 1362
Ama87I CYCGRG 1 cut(s) 530
Aor13HI TCCGGA 1 cut(s) 604
AoxI GGCC 2 cut(s) 133, 1233
ApeKI GCWGC 8 cut(s) 166, 244, 315, 518, 628, 833, 907, 1331
ApoI RAATTY 3 cut(s) 327, 685, 1097
ArsI GACNNNNNNTTYG 2 cut(s) 243, 275
AseI ATTAAT 1 cut(s) 774
AspLEI GCGC 1 cut(s) 679
AspS9I GGNCC 1 cut(s) 61
AsuC2I CCSGG 1 cut(s) 241
AsuHPI GGTGA 3 cut(s) 148, 1061, 1282
AvaI CYCGRG 1 cut(s) 530
AvaII GGWCC 1 cut(s) 61
BalI TGGCCA 1 cut(s) 135
BanI GGYRCC 1 cut(s) 676
Bbv12I GWGCWC 1 cut(s) 718
BbvI GCAGC 8 cut(s) 178, 256, 327, 530, 615, 820, 894, 1318
BccI CCATC 6 cut(s) 19, 85, 507, 737, 1102, 1147
BceAI ACGGC 2 cut(s) 160, 1319
BcgI CGANNNNNNTGC 2 cut(s) 294, 328
BciT130I CCWGG 1 cut(s) 323
BclI TGATCA 3 cut(s) 3, 583, 1249
BcnI CCSGG 1 cut(s) 241
BcoDI GTCTC 3 cut(s) 265, 463, 1138
BfaI CTAG 1 cut(s) 1296
BfmI CTRYAG 6 cut(s) 313, 567, 594, 807, 921, 1011
BfoI RGCGCY 1 cut(s) 680
Bme1390I CCNGG 2 cut(s) 241, 323
Bme18I GGWCC 1 cut(s) 61
BmeT110I CYCGRG 1 cut(s) 530
BmgT120I GGNCC 1 cut(s) 61
BmiI GGNNCC 1 cut(s) 678
BmrFI CCNGG 2 cut(s) 241, 323
BmsI GCATC 2 cut(s) 494, 1305
BoxI GACNNNNGTC 1 cut(s) 885
BpuMI CCSGG 1 cut(s) 241
BsaBI GATNNNNATC 2 cut(s) 728, 1112
BsaHI GRCGYC 2 cut(s) 153, 677
BsaJI CCNNGG 3 cut(s) 130, 216, 1275
BsaWI WCCGGW 1 cut(s) 604
BsaXI ACNNNNNCTCC 4 cut(s) 143, 173, 245, 275
Bsc4I CCNNNNNNNGG 4 cut(s) 239, 514, 535, 699
Bse118I RCCGGY 1 cut(s) 1235
Bse1I ACTGG 2 cut(s) 522, 990
Bse3DI GCAATG 1 cut(s) 623
Bse8I GATNNNNATC 2 cut(s) 728, 1112
BseAI TCCGGA 1 cut(s) 604
BseBI CCWGG 1 cut(s) 323
BseDI CCNNGG 3 cut(s) 130, 216, 1275
BseGI GGATG 6 cut(s) 11, 77, 653, 729, 1147, 1162
BseJI GATNNNNATC 2 cut(s) 728, 1112
BseLI CCNNNNNNNGG 4 cut(s) 239, 514, 535, 699
BseMI GCAATG 1 cut(s) 623
BseMII CTCAG 2 cut(s) 748, 984
BseNI ACTGG 2 cut(s) 522, 990
BseRI GAGGAG 4 cut(s) 853, 891, 1015, 1103
BseXI GCAGC 8 cut(s) 178, 256, 327, 530, 615, 820, 894, 1318
BseYI CCCAGC 1 cut(s) 162
Bsh1236I CGCG 1 cut(s) 1308
BshFI GGCC 2 cut(s) 135, 1235
BshNI GGYRCC 1 cut(s) 676
BsiHKAI GWGCWC 1 cut(s) 718
BsiHKCI CYCGRG 1 cut(s) 530
BsiSI CCGG 4 cut(s) 240, 605, 911, 1236
BslI CCNNNNNNNGG 4 cut(s) 239, 514, 535, 699
BsmAI GTCTC 3 cut(s) 265, 463, 1138
BsmI GAATGC 1 cut(s) 374
BsnI GGCC 2 cut(s) 135, 1235
BsoBI CYCGRG 1 cut(s) 530
Bsp1286I GDGCHC 1 cut(s) 718
Bsp13I TCCGGA 1 cut(s) 604
Bsp143I GATC 7 cut(s) 3, 474, 556, 583, 617, 842, 1249
Bsp19I CCATGG 1 cut(s) 130
BspACI CCGC 3 cut(s) 147, 905, 1366
BspANI GGCC 2 cut(s) 135, 1235
BspCNI CTCAG 2 cut(s) 747, 985
BspEI TCCGGA 1 cut(s) 604
BspFNI CGCG 1 cut(s) 1308
BspHI TCATGA 1 cut(s) 666
BspLI GGNNCC 1 cut(s) 678
BspMAI CTGCAG 5 cut(s) 317, 571, 598, 811, 1015
BspPI GGATC 1 cut(s) 625
BspT107I GGYRCC 1 cut(s) 676
BsrDI GCAATG 1 cut(s) 623
BsrFI RCCGGY 1 cut(s) 1235
BsrI ACTGG 2 cut(s) 522, 990
BssAI RCCGGY 1 cut(s) 1235
BssECI CCNNGG 3 cut(s) 130, 216, 1275
BssMI GATC 7 cut(s) 3, 474, 556, 583, 617, 842, 1249
BssNI GRCGYC 2 cut(s) 153, 677
BssT1I CCWWGG 3 cut(s) 130, 216, 1275
Bst2UI CCWGG 1 cut(s) 323
Bst4CI ACNGT 4 cut(s) 427, 437, 765, 951
Bst6I CTCTTC 2 cut(s) 115, 1047
BstACI GRCGYC 2 cut(s) 153, 677
BstAPI GCANNNNNTGC 2 cut(s) 380, 1331
BstC8I GCNNGC 3 cut(s) 171, 873, 1135
BstDEI CTNAG 2 cut(s) 734, 993
BstDSI CCRYGG 1 cut(s) 130
BstEII GGTNACC 1 cut(s) 1270
BstF5I GGATG 6 cut(s) 11, 77, 653, 729, 1147, 1162
BstFNI CGCG 1 cut(s) 1308
BstH2I RGCGCY 1 cut(s) 680
BstHHI GCGC 1 cut(s) 679
BstKTI GATC 7 cut(s) 6, 477, 559, 586, 620, 845, 1252
BstMAI GTCTC 3 cut(s) 265, 463, 1138
BstMBI GATC 7 cut(s) 3, 474, 556, 583, 617, 842, 1249
BstMWI GCNNNNNNNGC 4 cut(s) 132, 380, 833, 1331
BstNI CCWGG 1 cut(s) 323
BstNSI RCATGY 2 cut(s) 498, 1372
BstPAI GACNNNNGTC 1 cut(s) 885
BstPI GGTNACC 1 cut(s) 1270
BstSCI CCNGG 2 cut(s) 239, 321
BstSFI CTRYAG 6 cut(s) 313, 567, 594, 807, 921, 1011
BstUI CGCG 1 cut(s) 1308
BstV1I GCAGC 8 cut(s) 178, 256, 327, 530, 615, 820, 894, 1318
BstXI CCANNNNNNTGG 2 cut(s) 217, 793
BsuRI GGCC 2 cut(s) 135, 1235
BtgI CCRYGG 1 cut(s) 130
BtsCI GGATG 6 cut(s) 11, 77, 653, 729, 1147, 1162
BtsI GCAGTG 4 cut(s) 406, 603, 882, 1360
BtsIMutI CAGTG 6 cut(s) 406, 603, 742, 770, 882, 1360
Cac8I GCNNGC 3 cut(s) 171, 873, 1135
CaiI CAGNNNCTG 2 cut(s) 1331, 1362
CciI TCATGA 1 cut(s) 666
CfoI GCGC 1 cut(s) 679
Cfr10I RCCGGY 1 cut(s) 1235
Cfr13I GGNCC 1 cut(s) 61
CseI GACGC 1 cut(s) 491
Csp6I GTAC 2 cut(s) 525, 1239
CviAII CATG 9 cut(s) 131, 174, 495, 554, 581, 667, 673, 980, 1369
CviQI GTAC 2 cut(s) 525, 1239
DdeI CTNAG 2 cut(s) 734, 993
DinI GGCGCC 1 cut(s) 678
DpnI GATC 7 cut(s) 5, 476, 558, 585, 619, 844, 1251
DpnII GATC 7 cut(s) 3, 474, 556, 583, 617, 842, 1249
EaeI YGGCCR 2 cut(s) 133, 1233
Eam1104I CTCTTC 2 cut(s) 115, 1047
EarI CTCTTC 2 cut(s) 115, 1047
Eco130I CCWWGG 3 cut(s) 130, 216, 1275
Eco47I GGWCC 1 cut(s) 61
Eco57I CTGAAG 1 cut(s) 96
Eco88I CYCGRG 1 cut(s) 530
Eco91I GGTNACC 1 cut(s) 1270
EcoO65I GGTNACC 1 cut(s) 1270
EcoRII CCWGG 1 cut(s) 321
EcoT14I CCWWGG 3 cut(s) 130, 216, 1275
EgeI GGCGCC 1 cut(s) 678
EheI GGCGCC 1 cut(s) 678
ErhI CCWWGG 3 cut(s) 130, 216, 1275
FaeI CATG 9 cut(s) 134, 177, 498, 557, 584, 670, 676, 983, 1372
FatI CATG 9 cut(s) 130, 173, 494, 553, 580, 666, 672, 979, 1368
FauNDI CATATG 2 cut(s) 1139, 1203
FbaI TGATCA 3 cut(s) 3, 583, 1249
FblI GTMKAC 1 cut(s) 751
FokI GGATG 5 cut(s) 64, 640, 716, 1134, 1169
FspBI CTAG 1 cut(s) 1296
GlaI GCGC 1 cut(s) 678
GsaI CCCAGC 1 cut(s) 166
HaeII RGCGCY 1 cut(s) 680
HaeIII GGCC 2 cut(s) 135, 1235
HapII CCGG 4 cut(s) 240, 605, 911, 1236
HgaI GACGC 1 cut(s) 491
HhaI GCGC 1 cut(s) 679
Hin1I GRCGYC 2 cut(s) 153, 677
Hin1II CATG 9 cut(s) 134, 177, 498, 557, 584, 670, 676, 983, 1372
Hin6I GCGC 1 cut(s) 677
HinP1I GCGC 1 cut(s) 677
HincII GTYRAC 2 cut(s) 547, 574
HindII GTYRAC 2 cut(s) 547, 574
HindIII AAGCTT 1 cut(s) 1263
HinfI GANTC 5 cut(s) 539, 561, 928, 1113, 1339
HpaI GTTAAC 2 cut(s) 547, 574
HpaII CCGG 4 cut(s) 240, 605, 911, 1236
HphI GGTGA 3 cut(s) 148, 1061, 1282
Hpy166II GTNNAC 5 cut(s) 547, 574, 752, 880, 1194
Hpy188I TCNGA 4 cut(s) 115, 187, 640, 1152
Hpy188III TCNNGA 4 cut(s) 605, 667, 1117, 1253
Hpy8I GTNNAC 5 cut(s) 547, 574, 752, 880, 1194
Hpy99I CGWCG 4 cut(s) 155, 485, 891, 1313
HpyAV CCTTC 7 cut(s) 91, 275, 645, 658, 693, 864, 1039
HpyCH4III ACNGT 4 cut(s) 427, 437, 765, 951
HpyCH4IV ACGT 2 cut(s) 153, 886
HpyF10VI GCNNNNNNNGC 4 cut(s) 132, 380, 833, 1331
HpyF3I CTNAG 2 cut(s) 734, 993
HpySE526I ACGT 2 cut(s) 153, 886
Hsp92I GRCGYC 2 cut(s) 153, 677
Hsp92II CATG 9 cut(s) 134, 177, 498, 557, 584, 670, 676, 983, 1372
HspAI GCGC 1 cut(s) 677
KasI GGCGCC 1 cut(s) 676
Kpn2I TCCGGA 1 cut(s) 604
Ksp22I TGATCA 3 cut(s) 3, 583, 1249
KspAI GTTAAC 2 cut(s) 547, 574
Kzo9I GATC 7 cut(s) 3, 474, 556, 583, 617, 842, 1249
LmnI GCTCC 2 cut(s) 284, 721
Lsp1109I GCAGC 8 cut(s) 178, 256, 327, 530, 615, 820, 894, 1318
LweI GCATC 2 cut(s) 494, 1305
MaeI CTAG 1 cut(s) 1296
MaeII ACGT 2 cut(s) 153, 886
MaeIII GTNAC 8 cut(s) 154, 272, 308, 351, 737, 1022, 1270, 1358
MalI GATC 7 cut(s) 5, 476, 558, 585, 619, 844, 1251
MboI GATC 7 cut(s) 3, 474, 556, 583, 617, 842, 1249
MboII GAAGA 6 cut(s) 94, 102, 749, 903, 1064, 1292
MhlI GDGCHC 1 cut(s) 718
MlsI TGGCCA 1 cut(s) 135
MluCI AATT 7 cut(s) 327, 419, 444, 685, 744, 771, 1097
MluNI TGGCCA 1 cut(s) 135
Mly113I GGCGCC 1 cut(s) 677
MlyI GAGTC 1 cut(s) 548
MmeI TCCRAC 3 cut(s) 44, 516, 595
Mox20I TGGCCA 1 cut(s) 135
MroI TCCGGA 1 cut(s) 604
MscI TGGCCA 1 cut(s) 135
MseI TTAA 5 cut(s) 432, 546, 573, 774, 867
MslI CAYNNNNRTG 4 cut(s) 493, 671, 791, 1223
Msp20I TGGCCA 1 cut(s) 135
MspA1I CMGCKG 1 cut(s) 907
MspI CCGG 4 cut(s) 240, 605, 911, 1236
MspR9I CCNGG 2 cut(s) 241, 323
Mva1269I GAATGC 1 cut(s) 374
MvaI CCWGG 1 cut(s) 323
MvnI CGCG 1 cut(s) 1308
MwoI GCNNNNNNNGC 4 cut(s) 132, 380, 833, 1331
NarI GGCGCC 1 cut(s) 677
NciI CCSGG 1 cut(s) 241
NcoI CCATGG 1 cut(s) 130
NdeI CATATG 2 cut(s) 1139, 1203
NdeII GATC 7 cut(s) 3, 474, 556, 583, 617, 842, 1249
NlaIII CATG 9 cut(s) 134, 177, 498, 557, 584, 670, 676, 983, 1372
NlaIV GGNNCC 1 cut(s) 678
NmuCI GTSAC 4 cut(s) 154, 737, 1270, 1358
NspI RCATGY 2 cut(s) 498, 1372
OliI CACNNNNGTG 1 cut(s) 791
PaeR7I CTCGAG 1 cut(s) 530
PagI TCATGA 1 cut(s) 666
PcsI WCGNNNNNNNCGW 1 cut(s) 150
PctI GAATGC 1 cut(s) 374
PfeI GAWTC 4 cut(s) 561, 928, 1113, 1339
PflFI GACNNNGTC 1 cut(s) 257
PfoI TCCNGGA 1 cut(s) 321
PleI GAGTC 1 cut(s) 547
PluTI GGCGCC 1 cut(s) 680
PpsI GAGTC 1 cut(s) 547
PshAI GACNNNNGTC 1 cut(s) 885
PshBI ATTAAT 1 cut(s) 774
Psp6I CCWGG 1 cut(s) 321
PspEI GGTNACC 1 cut(s) 1270
PspFI CCCAGC 1 cut(s) 162
PspGI CCWGG 1 cut(s) 321
PspN4I GGNNCC 1 cut(s) 678
PspPI GGNCC 1 cut(s) 61
PspXI VCTCGAGB 1 cut(s) 530
PsrI GAACNNNNNNTAC 2 cut(s) 336, 368
PstI CTGCAG 5 cut(s) 317, 571, 598, 811, 1015
PstNI CAGNNNCTG 2 cut(s) 1331, 1362
PsyI GACNNNGTC 1 cut(s) 257
RsaI GTAC 2 cut(s) 526, 1240
RsaNI GTAC 2 cut(s) 525, 1239
RseI CAYNNNNRTG 4 cut(s) 493, 671, 791, 1223
SaqAI TTAA 5 cut(s) 432, 546, 573, 774, 867
Sau3AI GATC 7 cut(s) 3, 474, 556, 583, 617, 842, 1249
Sau96I GGNCC 1 cut(s) 61
SchI GAGTC 1 cut(s) 548
ScrFI CCNGG 2 cut(s) 241, 323
SduI GDGCHC 1 cut(s) 718
SfaNI GCATC 2 cut(s) 494, 1305
SfcI CTRYAG 6 cut(s) 313, 567, 594, 807, 921, 1011
SfoI GGCGCC 1 cut(s) 678
Sfr274I CTCGAG 1 cut(s) 530
SinI GGWCC 1 cut(s) 61
SlaI CTCGAG 1 cut(s) 530
SmiMI CAYNNNNRTG 4 cut(s) 493, 671, 791, 1223
SmlI CTYRAG 1 cut(s) 530
SmoI CTYRAG 1 cut(s) 530
Sse9I AATT 7 cut(s) 327, 419, 444, 685, 744, 771, 1097
SsiI CCGC 3 cut(s) 147, 905, 1366
SspDI GGCGCC 1 cut(s) 676
SspMI CTAG 1 cut(s) 1296
StyD4I CCNGG 2 cut(s) 239, 321
StyI CCWWGG 3 cut(s) 130, 216, 1275
TaaI ACNGT 4 cut(s) 427, 437, 765, 951
TaiI ACGT 2 cut(s) 156, 889
TaqI TCGA 5 cut(s) 531, 559, 889, 957, 1243
TaqII GACCGA 1 cut(s) 204
TasI AATT 7 cut(s) 327, 419, 444, 685, 744, 771, 1097
TauI GCSGC 2 cut(s) 150, 1368
TfiI GAWTC 4 cut(s) 561, 928, 1113, 1339
Tru1I TTAA 5 cut(s) 432, 546, 573, 774, 867
Tru9I TTAA 5 cut(s) 432, 546, 573, 774, 867
TscAI CASTG 6 cut(s) 406, 603, 742, 770, 882, 1367
TseFI GTSAC 4 cut(s) 154, 737, 1270, 1358
TseI GCWGC 8 cut(s) 166, 244, 315, 518, 628, 833, 907, 1331
Tsp45I GTSAC 4 cut(s) 154, 737, 1270, 1358
TspDTI ATGAA 5 cut(s) 294, 683, 996, 1173, 1190
TspGWI ACGGA 2 cut(s) 253, 532
TspRI CASTG 6 cut(s) 406, 603, 742, 770, 882, 1367
Tth111I GACNNNGTC 1 cut(s) 257
VpaK11BI GGWCC 1 cut(s) 61
VspI ATTAAT 1 cut(s) 774
XapI RAATTY 3 cut(s) 327, 685, 1097
XceI RCATGY 2 cut(s) 498, 1372
XhoI CTCGAG 1 cut(s) 530
XmiI GTMKAC 1 cut(s) 751
XspI CTAG 1 cut(s) 1296
ZraI GACGTC 1 cut(s) 154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.