Rw7G025450

BAHD acyltransferase At5g47980-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
31795250 .. 31796704
1455 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G025450.1

Sequence Viewer

Length: 1455 bp
ATGGTGACTTTTCTTTCAAAGTTTCAGAGAGTTGTAAGCGCCTACTGCACAAGCAGAGTCTATCCAATTAGACAGTATGGATTCAAATGCTCCATGCATTCACTGGTAGAAATCACCTCAAGAAAATCCATCAAACCATCATCTCCAACTCCTCATCAAAATAGATATCTCAAACTCTCTCTTTTGGACCAACTTCTTCCTCCTACTGTATATGGAACCATCCTGTATTTCTACACCCCTACCACCAACCACTGTGATCATGATGTTGCACTTTCGAAAGTTTCTGAGACTAGTATTTCGAAGCGCTTACAAGCTTCACTATCCGAAACCTTGGTTCATTACTATCCACTCGCTGGCCGTCTCAAAGGCACTGCGTCCATTGAGTGCAACGATGAAGGCGCACATTTTGTTGAAGCCCGAGTTAGGTGTCAGCTTTCAGATTTTCTTAAACAACCTGATCCTGAGTTACTTAAAAAATTTATGGCAGAACATGATTCTAAAACTGCTCAGATAGCCTTGGGTACTTGTGTCTTGCTTGTTCAAATCAGTGTTTTCAACTGCGGAGGAATAGTTGTTGCTGTATCCCCTTCACACAAGATTGCAGATGGAATATCCCTCCACACATTTGTACGATTATGGGCTGCTATAAATCGCGGTGAGTACCATCAACTAGTTCTACCGAAGTTTAATGGAGCGACTTTGTTGCCGACTAAAGACTTGTCCACCACCATGCACAACTTCTTAGGACCAATCCCAATCCCAACTCAAACTTTAACCACAAGAAGGTTCGTGTTTGATCTGTCAAAGTTGGCAATTCTCAAGGCTGAAATTGGGAGTAGAATCCAAAAGTTCACCCCGACGAACGGACAACTTGTTCTGGCAATCATCTTAAAATGTGCTCTTGCTGCTTCTCATCAATCCAAGCCTGATGGAGACACTACTTCAAGGCTAACAGTATTGTCCCAAATGGTAAACTTGCGCAGAAGAATTGTACCAGAAGTACCCGAAAACGAAATGGGGAACTGGTTTTGGGCGCTTTCCCTGTTATTCAAAGAAAATGAGACAGAAATACACGAGTTGGTGATCAATATGAATAAAGGATTGACAAACTTCTGCAAGGAGAAAGCAAACAGATTTAAAGGTGACGACGGATTCTTGGTGGTGTCTGAGTCTATGAGAGAAAAGGCTGATCTTTATAATGCAGAAAAGGGCATCAACATCTACAAGAGTACAAGTGTGTGCAAGTTCCCTCTGTATGAAATCGATTTCGGGTGGGGAAAACCTACCTGGGTTTCTAGCCCAAGTGAACACAAAAACTTGATTTTGCTGCTGGACACAAAAAGTGGTGATGGTATAGAAGCTTGGGTGACACTTGATCAACAAGAAATGGCCATTTTTGAGTGTCACGAGGAGCTCCTTGCATTCAGCTCCGTTAATCCCAGCGTCGTTAATTAG

Protein Analysis

484

Amino Acids

54.28

Weight (kDa)

8.51

Isoelectric Point (pI)

36.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 36 - 472 9.5e-82 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1197
Acc16I TGCGCA 1 cut(s) 980
AccB7I CCANNNNNTGG 1 cut(s) 353
AccII CGCG 1 cut(s) 654
AciI CCGC 2 cut(s) 561, 654
AclWI GGATC 1 cut(s) 452
AcoI YGGCCR 2 cut(s) 355, 1389
AcsI RAATTY 1 cut(s) 476
AfaI GTAC 6 cut(s) 523, 630, 662, 993, 1002, 1231
AfeI AGCGCT 1 cut(s) 305
AfiI CCNNNNNNNGG 4 cut(s) 353, 423, 783, 863
AgsI TTSAA 7 cut(s) 18, 85, 413, 542, 556, 945, 1051
AhlI ACTAGT 2 cut(s) 290, 670
AjnI CCWGG 1 cut(s) 1286
AloI GAACNNNNNNTCC 2 cut(s) 858, 890
AluBI AGCT 5 cut(s) 314, 433, 1361, 1414, 1428
AluI AGCT 5 cut(s) 314, 433, 1361, 1414, 1428
Alw21I GWGCWC 2 cut(s) 901, 1416
Alw26I GTCTC 4 cut(s) 281, 365, 927, 1055
AlwI GGATC 1 cut(s) 452
Ama87I CYCGRG 1 cut(s) 417
Aor51HI AGCGCT 1 cut(s) 305
AoxI GGCC 2 cut(s) 355, 1389
ApeKI GCWGC 3 cut(s) 641, 905, 1327
ApoI RAATTY 1 cut(s) 476
ArsI GACNNNNNNTTYG 2 cut(s) 280, 312
AspLEI GCGC 5 cut(s) 41, 306, 401, 981, 1036
AspS9I GGNCC 2 cut(s) 187, 746
AsuHPI GGTGA 8 cut(s) 16, 106, 668, 844, 1093, 1154, 1358, 1378
AsuII TTCGAA 2 cut(s) 275, 299
AvaI CYCGRG 1 cut(s) 417
AvaII GGWCC 2 cut(s) 187, 746
BaeI ACNNNNGTAYC 2 cut(s) 513, 546
BalI TGGCCA 1 cut(s) 1391
BanII GRGCYC 1 cut(s) 1416
BauI CACGAG 2 cut(s) 1073, 1406
Bbv12I GWGCWC 2 cut(s) 901, 1416
BbvI GCAGC 3 cut(s) 628, 892, 1314
BccI CCATC 7 cut(s) 137, 145, 227, 599, 672, 923, 1343
BceAI ACGGC 1 cut(s) 342
BcgI CGANNNNNNTGC 2 cut(s) 685, 719
BciT130I CCWGG 1 cut(s) 1288
BciVI GTATCC 1 cut(s) 592
BclI TGATCA 3 cut(s) 256, 1083, 1375
BcoDI GTCTC 4 cut(s) 281, 365, 927, 1055
BcuI ACTAGT 2 cut(s) 290, 670
BfaI CTAG 3 cut(s) 291, 671, 1296
BfoI RGCGCY 3 cut(s) 42, 307, 1037
BfuI GTATCC 1 cut(s) 592
BisI GCNGC 3 cut(s) 642, 906, 1328
BlsI GCNGC 3 cut(s) 643, 907, 1329
Bme1390I CCNGG 1 cut(s) 1288
Bme18I GGWCC 2 cut(s) 187, 746
BmeT110I CYCGRG 1 cut(s) 417
BmgT120I GGNCC 2 cut(s) 187, 746
BmiI GGNNCC 1 cut(s) 217
BmrFI CCNGG 1 cut(s) 1288
BmsI GCATC 1 cut(s) 1221
Bpu14I TTCGAA 2 cut(s) 275, 299
BpuEI CTTGAG 2 cut(s) 103, 803
Bsa29I ATCGAT 1 cut(s) 1263
BsaJI CCNNGG 3 cut(s) 330, 516, 1287
BsaXI ACNNNNNCTCC 2 cut(s) 555, 585
Bsc4I CCNNNNNNNGG 4 cut(s) 353, 423, 783, 863
Bse1I ACTGG 2 cut(s) 108, 1028
BseBI CCWGG 1 cut(s) 1288
BseCI ATCGAT 1 cut(s) 1263
BseDI CCNNGG 3 cut(s) 330, 516, 1287
BseGI GGATG 1 cut(s) 219
BseLI CCNNNNNNNGG 4 cut(s) 353, 423, 783, 863
BseMII CTCAG 4 cut(s) 276, 453, 521, 1158
BseNI ACTGG 2 cut(s) 108, 1028
BseRI GAGGAG 2 cut(s) 141, 1424
BseXI GCAGC 3 cut(s) 628, 892, 1314
BseYI CCCAGC 1 cut(s) 1439
BsgI GTGCAG 1 cut(s) 31
Bsh1236I CGCG 1 cut(s) 654
BshFI GGCC 2 cut(s) 357, 1391
BshVI ATCGAT 1 cut(s) 1263
BsiHKAI GWGCWC 2 cut(s) 901, 1416
BsiHKCI CYCGRG 1 cut(s) 417
BslFI GGGAC 1 cut(s) 946
BslI CCNNNNNNNGG 4 cut(s) 353, 423, 783, 863
BsmAI GTCTC 4 cut(s) 281, 365, 927, 1055
BsmBI CGTCTC 1 cut(s) 365
BsmFI GGGAC 1 cut(s) 946
BsmI GAATGC 2 cut(s) 97, 1421
BsnI GGCC 2 cut(s) 357, 1391
BsoBI CYCGRG 1 cut(s) 417
Bsp119I TTCGAA 2 cut(s) 275, 299
Bsp1286I GDGCHC 2 cut(s) 901, 1416
Bsp143I GATC 6 cut(s) 256, 457, 796, 1083, 1189, 1375
BspACI CCGC 2 cut(s) 561, 654
BspANI GGCC 2 cut(s) 357, 1391
BspCNI CTCAG 4 cut(s) 277, 454, 520, 1159
BspDI ATCGAT 1 cut(s) 1263
BspFNI CGCG 1 cut(s) 654
BspHI TCATGA 1 cut(s) 259
BspLI GGNNCC 1 cut(s) 217
BspPI GGATC 1 cut(s) 452
BspT104I TTCGAA 2 cut(s) 275, 299
BsrI ACTGG 2 cut(s) 108, 1028
BssECI CCNNGG 3 cut(s) 330, 516, 1287
BssMI GATC 6 cut(s) 256, 457, 796, 1083, 1189, 1375
BssSI CACGAG 2 cut(s) 1073, 1406
BssT1I CCWWGG 2 cut(s) 330, 516
Bst2BI CACGAG 2 cut(s) 1073, 1406
Bst2UI CCWGG 1 cut(s) 1288
Bst4CI ACNGT 4 cut(s) 75, 208, 254, 955
BstBI TTCGAA 2 cut(s) 275, 299
BstC8I GCNNGC 1 cut(s) 355
BstDEI CTNAG 5 cut(s) 285, 462, 507, 742, 1167
BstF5I GGATG 1 cut(s) 219
BstFNI CGCG 1 cut(s) 654
BstH2I RGCGCY 3 cut(s) 42, 307, 1037
BstHHI GCGC 5 cut(s) 41, 306, 401, 981, 1036
BstKTI GATC 6 cut(s) 259, 460, 799, 1086, 1192, 1378
BstMAI GTCTC 4 cut(s) 281, 365, 927, 1055
BstMBI GATC 6 cut(s) 256, 457, 796, 1083, 1189, 1375
BstMWI GCNNNNNNNGC 3 cut(s) 45, 512, 905
BstNI CCWGG 1 cut(s) 1288
BstSCI CCNGG 1 cut(s) 1286
BstUI CGCG 1 cut(s) 654
BstV1I GCAGC 3 cut(s) 628, 892, 1314
Bsu15I ATCGAT 1 cut(s) 1263
BsuI GTATCC 1 cut(s) 592
BsuRI GGCC 2 cut(s) 357, 1391
BsuTUI ATCGAT 1 cut(s) 1263
BtsCI GGATG 1 cut(s) 219
BtsI GCAGTG 1 cut(s) 369
BtsIMutI CAGTG 4 cut(s) 101, 250, 369, 553
Cac8I GCNNGC 1 cut(s) 355
CciI TCATGA 1 cut(s) 259
CfoI GCGC 5 cut(s) 41, 306, 401, 981, 1036
Cfr13I GGNCC 2 cut(s) 187, 746
ClaI ATCGAT 1 cut(s) 1263
CseI GACGC 2 cut(s) 363, 1432
Csp6I GTAC 6 cut(s) 522, 629, 661, 992, 1001, 1230
CviAII CATG 4 cut(s) 94, 260, 491, 730
CviQI GTAC 6 cut(s) 522, 629, 661, 992, 1001, 1230
DdeI CTNAG 5 cut(s) 285, 462, 507, 742, 1167
DpnI GATC 6 cut(s) 258, 459, 798, 1085, 1191, 1377
DpnII GATC 6 cut(s) 256, 457, 796, 1083, 1189, 1375
DraI TTTAAA 1 cut(s) 1138
EaeI YGGCCR 2 cut(s) 355, 1389
Ecl136II GAGCTC 1 cut(s) 1414
Eco130I CCWWGG 2 cut(s) 330, 516
Eco24I GRGCYC 1 cut(s) 1416
Eco32I GATATC 1 cut(s) 167
Eco47I GGWCC 2 cut(s) 187, 746
Eco47III AGCGCT 1 cut(s) 305
Eco53kI GAGCTC 1 cut(s) 1414
Eco88I CYCGRG 1 cut(s) 417
EcoICRI GAGCTC 1 cut(s) 1414
EcoRII CCWGG 1 cut(s) 1286
EcoRV GATATC 1 cut(s) 167
EcoT14I CCWWGG 2 cut(s) 330, 516
EcoT22I ATGCAT 1 cut(s) 99
EcoT38I GRGCYC 1 cut(s) 1416
ErhI CCWWGG 2 cut(s) 330, 516
Esp3I CGTCTC 1 cut(s) 365
FaeI CATG 4 cut(s) 97, 263, 494, 733
FaqI GGGAC 1 cut(s) 946
FatI CATG 4 cut(s) 93, 259, 490, 729
FbaI TGATCA 3 cut(s) 256, 1083, 1375
Fnu4HI GCNGC 3 cut(s) 642, 906, 1328
FokI GGATG 1 cut(s) 206
FriOI GRGCYC 1 cut(s) 1416
Fsp4HI GCNGC 3 cut(s) 642, 906, 1328
FspBI CTAG 3 cut(s) 291, 671, 1296
FspI TGCGCA 1 cut(s) 980
GlaI GCGC 5 cut(s) 40, 305, 400, 980, 1035
GluI GCNGC 3 cut(s) 642, 906, 1328
GsaI CCCAGC 1 cut(s) 1443
HaeII RGCGCY 3 cut(s) 42, 307, 1037
HaeIII GGCC 2 cut(s) 357, 1391
HgaI GACGC 2 cut(s) 363, 1432
HhaI GCGC 5 cut(s) 41, 306, 401, 981, 1036
Hin1II CATG 4 cut(s) 97, 263, 494, 733
Hin6I GCGC 5 cut(s) 39, 304, 399, 979, 1034
HinP1I GCGC 5 cut(s) 39, 304, 399, 979, 1034
HindIII AAGCTT 2 cut(s) 312, 1359
HinfI GANTC 6 cut(s) 57, 81, 494, 840, 1152, 1169
HphI GGTGA 8 cut(s) 16, 106, 668, 844, 1093, 1154, 1358, 1378
Hpy166II GTNNAC 4 cut(s) 723, 852, 973, 1307
Hpy188I TCNGA 6 cut(s) 27, 286, 325, 439, 510, 1168
Hpy188III TCNNGA 4 cut(s) 120, 260, 461, 1406
Hpy8I GTNNAC 4 cut(s) 723, 852, 973, 1307
Hpy99I CGWCG 3 cut(s) 862, 1151, 1448
HpyAV CCTTC 3 cut(s) 389, 597, 777
HpyCH4III ACNGT 4 cut(s) 75, 208, 254, 955
HpyF10VI GCNNNNNNNGC 3 cut(s) 45, 512, 905
HpyF3I CTNAG 5 cut(s) 285, 462, 507, 742, 1167
Hsp92II CATG 4 cut(s) 97, 263, 494, 733
HspAI GCGC 5 cut(s) 39, 304, 399, 979, 1034
Ksp22I TGATCA 3 cut(s) 256, 1083, 1375
Kzo9I GATC 6 cut(s) 256, 457, 796, 1083, 1189, 1375
LmnI GCTCC 5 cut(s) 95, 692, 1411, 1419, 1433
Lsp1109I GCAGC 3 cut(s) 628, 892, 1314
LweI GCATC 1 cut(s) 1221
MaeI CTAG 3 cut(s) 291, 671, 1296
MaeIII GTNAC 5 cut(s) 4, 465, 1142, 1366, 1403
MalI GATC 6 cut(s) 258, 459, 798, 1085, 1191, 1377
MboI GATC 6 cut(s) 256, 457, 796, 1083, 1189, 1375
MboII GAAGA 2 cut(s) 188, 996
MhlI GDGCHC 2 cut(s) 901, 1416
MlsI TGGCCA 1 cut(s) 1391
MluCI AATT 6 cut(s) 66, 476, 813, 828, 987, 1450
MluNI TGGCCA 1 cut(s) 1391
MlyI GAGTC 2 cut(s) 66, 1178
MmeI TCCRAC 1 cut(s) 170
MnlI CCTC 7 cut(s) 127, 162, 210, 557, 626, 1260, 1402
Mox20I TGGCCA 1 cut(s) 1391
Mph1103I ATGCAT 1 cut(s) 99
MscI TGGCCA 1 cut(s) 1391
MseI TTAA 8 cut(s) 447, 471, 687, 773, 890, 1137, 1434, 1449
MslI CAYNNNNRTG 1 cut(s) 728
Msp20I TGGCCA 1 cut(s) 1391
MspR9I CCNGG 1 cut(s) 1288
Mva1269I GAATGC 2 cut(s) 97, 1421
MvaI CCWGG 1 cut(s) 1288
MvnI CGCG 1 cut(s) 654
MwoI GCNNNNNNNGC 3 cut(s) 45, 512, 905
NdeII GATC 6 cut(s) 256, 457, 796, 1083, 1189, 1375
NlaIII CATG 4 cut(s) 97, 263, 494, 733
NlaIV GGNNCC 1 cut(s) 217
NmuCI GTSAC 4 cut(s) 4, 1142, 1366, 1403
NsbI TGCGCA 1 cut(s) 980
NsiI ATGCAT 1 cut(s) 99
NspV TTCGAA 2 cut(s) 275, 299
PagI TCATGA 1 cut(s) 259
PctI GAATGC 2 cut(s) 97, 1421
PfeI GAWTC 4 cut(s) 81, 494, 840, 1152
PflMI CCANNNNNTGG 1 cut(s) 353
PkrI GCNGC 3 cut(s) 643, 907, 1329
PleI GAGTC 2 cut(s) 65, 1177
PpsI GAGTC 2 cut(s) 65, 1177
PsiI TTATAA 1 cut(s) 1197
Psp124BI GAGCTC 1 cut(s) 1416
Psp6I CCWGG 1 cut(s) 1286
PspFI CCCAGC 1 cut(s) 1439
PspGI CCWGG 1 cut(s) 1286
PspN4I GGNNCC 1 cut(s) 217
PspPI GGNCC 2 cut(s) 187, 746
RsaI GTAC 6 cut(s) 523, 630, 662, 993, 1002, 1231
RsaNI GTAC 6 cut(s) 522, 629, 661, 992, 1001, 1230
RseI CAYNNNNRTG 1 cut(s) 728
SacI GAGCTC 1 cut(s) 1416
SaqAI TTAA 8 cut(s) 447, 471, 687, 773, 890, 1137, 1434, 1449
SatI GCNGC 3 cut(s) 642, 906, 1328
Sau3AI GATC 6 cut(s) 256, 457, 796, 1083, 1189, 1375
Sau96I GGNCC 2 cut(s) 187, 746
SchI GAGTC 2 cut(s) 66, 1178
ScrFI CCNGG 1 cut(s) 1288
SduI GDGCHC 2 cut(s) 901, 1416
SfaNI GCATC 1 cut(s) 1221
SfuI TTCGAA 2 cut(s) 275, 299
SinI GGWCC 2 cut(s) 187, 746
SmiMI CAYNNNNRTG 1 cut(s) 728
SmlI CTYRAG 2 cut(s) 118, 818
SmoI CTYRAG 2 cut(s) 118, 818
SpeI ACTAGT 2 cut(s) 290, 670
Sse9I AATT 6 cut(s) 66, 476, 813, 828, 987, 1450
SsiI CCGC 2 cut(s) 561, 654
SspMI CTAG 3 cut(s) 291, 671, 1296
SstI GAGCTC 1 cut(s) 1416
StyD4I CCNGG 1 cut(s) 1286
StyI CCWWGG 2 cut(s) 330, 516
TaaI ACNGT 4 cut(s) 75, 208, 254, 955
TaqI TCGA 3 cut(s) 275, 299, 1263
TasI AATT 6 cut(s) 66, 476, 813, 828, 987, 1450
TatI WGTACW 1 cut(s) 1229
TfiI GAWTC 4 cut(s) 81, 494, 840, 1152
Tru1I TTAA 8 cut(s) 447, 471, 687, 773, 890, 1137, 1434, 1449
Tru9I TTAA 8 cut(s) 447, 471, 687, 773, 890, 1137, 1434, 1449
TscAI CASTG 4 cut(s) 108, 257, 376, 553
TseFI GTSAC 4 cut(s) 4, 1142, 1366, 1403
TseI GCWGC 3 cut(s) 641, 905, 1327
Tsp45I GTSAC 4 cut(s) 4, 1142, 1366, 1403
TspDTI ATGAA 4 cut(s) 326, 408, 1106, 1272
TspGWI ACGGA 3 cut(s) 879, 1164, 1420
TspRI CASTG 4 cut(s) 108, 257, 376, 553
Van91I CCANNNNNTGG 1 cut(s) 353
VpaK11BI GGWCC 2 cut(s) 187, 746
XapI RAATTY 1 cut(s) 476
XcmI CCANNNNNNNNNTGG 1 cut(s) 100
XspI CTAG 3 cut(s) 291, 671, 1296
Zsp2I ATGCAT 1 cut(s) 99
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.