MD09G1062300.v1.1

BAHD acyltransferase At5g47980-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Forward (+)
4237190 .. 4238599
1410 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1062300.v1.1.491

Sequence Viewer

Length: 1410 bp
ATGACATTCGGAATTTGTAATACTGATATCAATTCACTGGTGGAAATCACCTCAAGAAAGATCATCAAACCATCATCTCCCACTCCTCATCTCAACAGAATTCTTAACCTCTCTCTTTACGACCAATTTTTTCCTTCGACTCTATATCCAACCATCCTATGGTTCTACGAAAACCATAGCGATTCTGGTTTTGCTTCCGAAACTTCAGAGACCAGAAAATCTCAGCGCTTGCAAGAGTCTCTATCTGAAGCTTTAGTTCACTTCTATCCACTGGCTGGCCGGCTCAAAAGCTCGGCGTTGGTTGAGTGCAACGATGAAGGGGCTCATTTTCTTGAAGCCCAAGTTAACTGCCAACTTTCGGACTTTCTCAAGCAACCCAATCCCGAGTTGATCAACCACTTTATTGCCGAAAATGATCCCGAAACAGGCCAAGTAGGTTTGGGATATGTACTCTTGTTTGTTCAGATTAGCTTTTTCAAGTGTGGAGGAATCGTTGTTGCTATATCCCCTTCACACAAGATTGCAGATGCAGCATCACTCCTCACATTCGCGCGAACATGGGCAGCAATAAACCGCAACGATGGAATCCTTGGAGTGAAATTGGTACAACCGGAGTTTACTGGAGGGTCTTTGTTACCCCCTAGAAGAGATTTACCCTTGGTGTCCATCAACGCCGCATCGAAAATCCAAAGTCAAAATTTAGTTACAAGAAGGTTTGTGTTCGATGTCTCAAAGATAGCCGGTCTGAAGGCCAAAATTGGGAGTGCAGTCCAAACCTTCATCCCATCACATGTAAACCTAGTTCTGGCTATCATATTGAAATGTTCTGTTGCTGCTTCCCGTCAATGCCAGCCTGAGAGTTCGACGAGGGCAACGGAGCTGTCCCAGATGATGAGCTTCCGCAAAAGAATGGTCCCCGAGATATCAGAAAATGTCATGGGGAACTGGTTTTGGCCACTACAAGTGGTATTCAGAGCAAATGAGACCGAGTTACACGAGTTAGTGAGCAATATGAGGCAATCAGCGGCAGATTTCTGGAAAATATTTAAATGTGAGGAAGGATTCTTGGTGGTGTCCGAGTTTATGAGAAAGCATGCTGATCCTTTTAAGAGGAACGAAGGCGTAAACTTTTACAGGACCACAAGCTTGTGCAAACTTCCTGTATATGAAATGGATTTTGGATGGGGAAAACCTGCGTGGGTCACCAACCATATCGTCCAAAAGAACGTAATTCGGTTGCTGGACACAAAACAGCAAGATGGTATCGAAGCTTGGGTGACCCTTGATGAACAAGAAATGGCCATATTTGAGTCTGATCAGGAGCTTCTTGAATTTGCTTCCGTCAACCCTAGCATCACTTGCCATTCCGGGCCGGTCCTGAGTTTTCTAAAGCCCAGGGCAAGGATCTAA

Protein Analysis

470

Amino Acids

52.75

Weight (kDa)

6.61

Isoelectric Point (pI)

40.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 14 - 442 1.4e-77 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1201
AccB7I CCANNNNNTGG 2 cut(s) 159, 275
AccII CGCG 2 cut(s) 551, 553
AciI CCGC 4 cut(s) 574, 675, 901, 1025
AclWI GGATC 2 cut(s) 410, 1094
AcoI YGGCCR 3 cut(s) 277, 953, 1299
AcsI RAATTY 4 cut(s) 12, 99, 697, 1331
AcuI CTGAAG 3 cut(s) 189, 267, 767
AfaI GTAC 2 cut(s) 450, 606
AfeI AGCGCT 1 cut(s) 227
AfiI CCNNNNNNNGG 7 cut(s) 159, 275, 358, 425, 759, 805, 1401
AflIII ACRYGT 1 cut(s) 790
AgsI TTSAA 4 cut(s) 335, 478, 820, 1331
AjnI CCWGG 1 cut(s) 1394
AjuI GAANNNNNNNTTGG 2 cut(s) 1161, 1193
AluBI AGCT 8 cut(s) 251, 291, 471, 880, 897, 1146, 1271, 1324
AluI AGCT 8 cut(s) 251, 291, 471, 880, 897, 1146, 1271, 1324
Alw26I GTCTC 4 cut(s) 203, 243, 733, 977
AlwI GGATC 2 cut(s) 410, 1094
Ama87I CYCGRG 2 cut(s) 383, 917
Aor51HI AGCGCT 1 cut(s) 227
AoxI GGCC 6 cut(s) 277, 427, 750, 953, 1299, 1370
ApeKI GCWGC 3 cut(s) 530, 563, 833
ApoI RAATTY 4 cut(s) 12, 99, 697, 1331
ArsI GACNNNNNNTTYG 2 cut(s) 897, 929
AspLEI GCGC 2 cut(s) 228, 553
AspS9I GGNCC 4 cut(s) 913, 1137, 1370, 1375
AsuC2I CCSGG 1 cut(s) 1369
AsuHPI GGTGA 3 cut(s) 40, 1195, 1288
AvaI CYCGRG 2 cut(s) 383, 917
AvaII GGWCC 3 cut(s) 913, 1137, 1375
BalI TGGCCA 2 cut(s) 955, 1301
BanII GRGCYC 1 cut(s) 325
BauI CACGAG 1 cut(s) 995
BbvI GCAGC 3 cut(s) 542, 575, 820
BccI CCATC 7 cut(s) 79, 161, 575, 674, 793, 1176, 1253
BciT130I CCWGG 1 cut(s) 1396
BclI TGATCA 2 cut(s) 390, 1315
BcnI CCSGG 1 cut(s) 1369
BcoDI GTCTC 4 cut(s) 203, 243, 733, 977
BfaI CTAG 3 cut(s) 642, 800, 1350
BfoI RGCGCY 1 cut(s) 229
BfuAI ACCTGC 1 cut(s) 1201
BisI GCNGC 5 cut(s) 531, 564, 675, 834, 1026
BlsI GCNGC 5 cut(s) 532, 565, 676, 835, 1027
Bme1390I CCNGG 2 cut(s) 1369, 1396
Bme18I GGWCC 3 cut(s) 913, 1137, 1375
BmeT110I CYCGRG 2 cut(s) 383, 917
BmgT120I GGNCC 4 cut(s) 913, 1137, 1370, 1375
BmiI GGNNCC 1 cut(s) 915
BmrFI CCNGG 2 cut(s) 1369, 1396
BmsI GCATC 4 cut(s) 517, 542, 686, 1362
BpmI CTGGAG 1 cut(s) 642
BpuEI CTTGAG 2 cut(s) 37, 353
BpuMI CCSGG 1 cut(s) 1369
BsaI GGTCTC 2 cut(s) 203, 977
BsaJI CCNNGG 4 cut(s) 589, 657, 1394, 1395
BsaWI WCCGGW 1 cut(s) 610
BsaXI ACNNNNNCTCC 2 cut(s) 477, 507
Bsc4I CCNNNNNNNGG 7 cut(s) 159, 275, 358, 425, 759, 805, 1401
Bse118I RCCGGY 3 cut(s) 279, 740, 1372
Bse1I ACTGG 4 cut(s) 42, 276, 625, 950
BseBI CCWGG 1 cut(s) 1396
BseDI CCNNGG 4 cut(s) 589, 657, 1394, 1395
BseGI GGATG 3 cut(s) 153, 780, 1187
BseLI CCNNNNNNNGG 7 cut(s) 159, 275, 358, 425, 759, 805, 1401
BseMII CTCAG 3 cut(s) 236, 846, 1370
BseNI ACTGG 4 cut(s) 42, 276, 625, 950
BseRI GAGGAG 2 cut(s) 75, 530
BseXI GCAGC 3 cut(s) 542, 575, 820
BsgI GTGCAG 1 cut(s) 786
Bsh1236I CGCG 2 cut(s) 551, 553
BshFI GGCC 6 cut(s) 279, 429, 752, 955, 1301, 1372
BsiHKCI CYCGRG 2 cut(s) 383, 917
BsiSI CCGG 5 cut(s) 280, 611, 741, 1368, 1373
BslFI GGGAC 2 cut(s) 868, 899
BslI CCNNNNNNNGG 7 cut(s) 159, 275, 358, 425, 759, 805, 1401
BsmAI GTCTC 4 cut(s) 203, 243, 733, 977
BsmFI GGGAC 2 cut(s) 868, 899
BsnI GGCC 6 cut(s) 279, 429, 752, 955, 1301, 1372
Bso31I GGTCTC 2 cut(s) 203, 977
BsoBI CYCGRG 2 cut(s) 383, 917
Bsp1286I GDGCHC 1 cut(s) 325
Bsp143I GATC 6 cut(s) 60, 390, 415, 1099, 1315, 1404
BspACI CCGC 4 cut(s) 574, 675, 901, 1025
BspANI GGCC 6 cut(s) 279, 429, 752, 955, 1301, 1372
BspCNI CTCAG 3 cut(s) 235, 847, 1371
BspFNI CGCG 2 cut(s) 551, 553
BspLI GGNNCC 1 cut(s) 915
BspMI ACCTGC 1 cut(s) 1201
BspPI GGATC 2 cut(s) 410, 1094
BspTNI GGTCTC 2 cut(s) 203, 977
BsrFI RCCGGY 3 cut(s) 279, 740, 1372
BsrI ACTGG 4 cut(s) 42, 276, 625, 950
BssAI RCCGGY 3 cut(s) 279, 740, 1372
BssECI CCNNGG 4 cut(s) 589, 657, 1394, 1395
BssMI GATC 6 cut(s) 60, 390, 415, 1099, 1315, 1404
BssSI CACGAG 1 cut(s) 995
BssT1I CCWWGG 2 cut(s) 589, 657
Bst2BI CACGAG 1 cut(s) 995
Bst2UI CCWGG 1 cut(s) 1396
Bst6I CTCTTC 1 cut(s) 640
BstAPI GCANNNNNTGC 1 cut(s) 1359
BstC8I GCNNGC 5 cut(s) 230, 277, 281, 851, 1095
BstDEI CTNAG 3 cut(s) 222, 855, 1379
BstEII GGTNACC 2 cut(s) 1201, 1276
BstF5I GGATG 3 cut(s) 153, 780, 1187
BstFNI CGCG 2 cut(s) 551, 553
BstH2I RGCGCY 1 cut(s) 229
BstHHI GCGC 2 cut(s) 228, 553
BstKTI GATC 6 cut(s) 63, 393, 418, 1102, 1318, 1407
BstMAI GTCTC 4 cut(s) 203, 243, 733, 977
BstMBI GATC 6 cut(s) 60, 390, 415, 1099, 1315, 1404
BstMWI GCNNNNNNNGC 2 cut(s) 530, 1359
BstNI CCWGG 1 cut(s) 1396
BstNSI RCATGY 2 cut(s) 794, 1097
BstPI GGTNACC 2 cut(s) 1201, 1276
BstSCI CCNGG 2 cut(s) 1367, 1394
BstUI CGCG 2 cut(s) 551, 553
BstV1I GCAGC 3 cut(s) 542, 575, 820
BstX2I RGATCY 1 cut(s) 1404
BstYI RGATCY 1 cut(s) 1404
BsuRI GGCC 6 cut(s) 279, 429, 752, 955, 1301, 1372
BtsCI GGATG 3 cut(s) 153, 780, 1187
BtsIMutI CAGTG 2 cut(s) 35, 269
BveI ACCTGC 1 cut(s) 1201
Cac8I GCNNGC 5 cut(s) 230, 277, 281, 851, 1095
CfoI GCGC 2 cut(s) 228, 553
Cfr10I RCCGGY 3 cut(s) 279, 740, 1372
Cfr13I GGNCC 4 cut(s) 913, 1137, 1370, 1375
Csp6I GTAC 2 cut(s) 449, 605
CviAII CATG 4 cut(s) 558, 791, 937, 1094
CviQI GTAC 2 cut(s) 449, 605
DdeI CTNAG 3 cut(s) 222, 855, 1379
DpnI GATC 6 cut(s) 62, 392, 417, 1101, 1317, 1406
DpnII GATC 6 cut(s) 60, 390, 415, 1099, 1315, 1404
DraI TTTAAA 1 cut(s) 1048
EaeI YGGCCR 3 cut(s) 277, 953, 1299
Eam1104I CTCTTC 1 cut(s) 640
EarI CTCTTC 1 cut(s) 640
Eco130I CCWWGG 2 cut(s) 589, 657
Eco24I GRGCYC 1 cut(s) 325
Eco31I GGTCTC 2 cut(s) 203, 977
Eco32I GATATC 2 cut(s) 28, 924
Eco47I GGWCC 3 cut(s) 913, 1137, 1375
Eco47III AGCGCT 1 cut(s) 227
Eco57I CTGAAG 3 cut(s) 189, 267, 767
Eco88I CYCGRG 2 cut(s) 383, 917
Eco91I GGTNACC 2 cut(s) 1201, 1276
EcoO65I GGTNACC 2 cut(s) 1201, 1276
EcoRI GAATTC 1 cut(s) 99
EcoRII CCWGG 1 cut(s) 1394
EcoRV GATATC 2 cut(s) 28, 924
EcoT14I CCWWGG 2 cut(s) 589, 657
EcoT38I GRGCYC 1 cut(s) 325
ErhI CCWWGG 2 cut(s) 589, 657
FaeI CATG 4 cut(s) 561, 794, 940, 1097
FaqI GGGAC 2 cut(s) 868, 899
FatI CATG 4 cut(s) 557, 790, 936, 1093
FbaI TGATCA 2 cut(s) 390, 1315
Fnu4HI GCNGC 5 cut(s) 531, 564, 675, 834, 1026
FokI GGATG 3 cut(s) 140, 767, 1194
FriOI GRGCYC 1 cut(s) 325
Fsp4HI GCNGC 5 cut(s) 531, 564, 675, 834, 1026
FspBI CTAG 3 cut(s) 642, 800, 1350
GlaI GCGC 2 cut(s) 227, 552
GluI GCNGC 5 cut(s) 531, 564, 675, 834, 1026
GsuI CTGGAG 1 cut(s) 642
HaeII RGCGCY 1 cut(s) 229
HaeIII GGCC 6 cut(s) 279, 429, 752, 955, 1301, 1372
HapII CCGG 5 cut(s) 280, 611, 741, 1368, 1373
HhaI GCGC 2 cut(s) 228, 553
Hin1II CATG 4 cut(s) 561, 794, 940, 1097
Hin6I GCGC 2 cut(s) 226, 551
HinP1I GCGC 2 cut(s) 226, 551
HincII GTYRAC 2 cut(s) 346, 1345
HindII GTYRAC 2 cut(s) 346, 1345
HindIII AAGCTT 3 cut(s) 249, 1144, 1269
HinfI GANTC 7 cut(s) 139, 182, 236, 489, 585, 1062, 1310
HpaI GTTAAC 1 cut(s) 346
HpaII CCGG 5 cut(s) 280, 611, 741, 1368, 1373
HphI GGTGA 3 cut(s) 40, 1195, 1288
Hpy166II GTNNAC 6 cut(s) 259, 346, 618, 796, 1126, 1345
Hpy188III TCNNGA 8 cut(s) 54, 332, 383, 419, 1036, 1319, 1328, 1378
Hpy8I GTNNAC 6 cut(s) 259, 346, 618, 796, 1126, 1345
Hpy99I CGWCG 1 cut(s) 868
HpyAV CCTTC 8 cut(s) 144, 311, 519, 705, 742, 787, 1052, 1112
HpyCH4IV ACGT 1 cut(s) 1227
HpyCH4V TGCA 6 cut(s) 232, 309, 524, 530, 767, 1152
HpyF10VI GCNNNNNNNGC 2 cut(s) 530, 1359
HpyF3I CTNAG 3 cut(s) 222, 855, 1379
HpySE526I ACGT 1 cut(s) 1227
Hsp92II CATG 4 cut(s) 561, 794, 940, 1097
HspAI GCGC 2 cut(s) 226, 551
KroI GCCGGC 1 cut(s) 279
KroNI GCCGGC 1 cut(s) 281
Ksp22I TGATCA 2 cut(s) 390, 1315
KspAI GTTAAC 1 cut(s) 346
Kzo9I GATC 6 cut(s) 60, 390, 415, 1099, 1315, 1404
LmnI GCTCC 2 cut(s) 877, 1321
Lsp1109I GCAGC 3 cut(s) 542, 575, 820
LweI GCATC 4 cut(s) 517, 542, 686, 1362
MaeI CTAG 3 cut(s) 642, 800, 1350
MaeII ACGT 1 cut(s) 1227
MaeIII GTNAC 5 cut(s) 633, 703, 990, 1201, 1276
MalI GATC 6 cut(s) 62, 392, 417, 1101, 1317, 1406
MboI GATC 6 cut(s) 60, 390, 415, 1099, 1315, 1404
MboII GAAGA 1 cut(s) 657
MflI RGATCY 1 cut(s) 1404
MhlI GDGCHC 1 cut(s) 325
MlsI TGGCCA 2 cut(s) 955, 1301
MluCI AATT 9 cut(s) 12, 31, 99, 125, 599, 697, 756, 1230, 1331
MluNI TGGCCA 2 cut(s) 955, 1301
MlyI GAGTC 3 cut(s) 133, 245, 1319
MmeI TCCRAC 1 cut(s) 173
Mox20I TGGCCA 2 cut(s) 955, 1301
MroNI GCCGGC 1 cut(s) 279
MscI TGGCCA 2 cut(s) 955, 1301
MseI TTAA 4 cut(s) 105, 345, 1047, 1107
Msp20I TGGCCA 2 cut(s) 955, 1301
MspA1I CMGCKG 1 cut(s) 1025
MspI CCGG 5 cut(s) 280, 611, 741, 1368, 1373
MspR9I CCNGG 2 cut(s) 1369, 1396
MvaI CCWGG 1 cut(s) 1396
MvnI CGCG 2 cut(s) 551, 553
MwoI GCNNNNNNNGC 2 cut(s) 530, 1359
NaeI GCCGGC 1 cut(s) 281
NciI CCSGG 1 cut(s) 1369
NdeII GATC 6 cut(s) 60, 390, 415, 1099, 1315, 1404
NgoMIV GCCGGC 1 cut(s) 279
NlaIII CATG 4 cut(s) 561, 794, 940, 1097
NlaIV GGNNCC 1 cut(s) 915
NmeAIII GCCGAG 1 cut(s) 272
NmuCI GTSAC 2 cut(s) 1201, 1276
NspI RCATGY 2 cut(s) 794, 1097
PaeI GCATGC 1 cut(s) 1097
PasI CCCWGGG 1 cut(s) 1395
PciI ACATGT 1 cut(s) 790
PdiI GCCGGC 1 cut(s) 281
PfeI GAWTC 4 cut(s) 182, 489, 585, 1062
PflMI CCANNNNNTGG 2 cut(s) 159, 275
PkrI GCNGC 5 cut(s) 532, 565, 676, 835, 1027
PleI GAGTC 3 cut(s) 133, 244, 1318
PpsI GAGTC 3 cut(s) 133, 244, 1318
PscI ACATGT 1 cut(s) 790
Psp6I CCWGG 1 cut(s) 1394
PspEI GGTNACC 2 cut(s) 1201, 1276
PspGI CCWGG 1 cut(s) 1394
PspN4I GGNNCC 1 cut(s) 915
PspPI GGNCC 4 cut(s) 913, 1137, 1370, 1375
PsrI GAACNNNNNNTAC 2 cut(s) 786, 818
PsuI RGATCY 1 cut(s) 1404
RsaI GTAC 2 cut(s) 450, 606
RsaNI GTAC 2 cut(s) 449, 605
SaqAI TTAA 4 cut(s) 105, 345, 1047, 1107
SatI GCNGC 5 cut(s) 531, 564, 675, 834, 1026
Sau3AI GATC 6 cut(s) 60, 390, 415, 1099, 1315, 1404
Sau96I GGNCC 4 cut(s) 913, 1137, 1370, 1375
SchI GAGTC 3 cut(s) 133, 245, 1319
ScrFI CCNGG 2 cut(s) 1369, 1396
SduI GDGCHC 1 cut(s) 325
SfaNI GCATC 4 cut(s) 517, 542, 686, 1362
SinI GGWCC 3 cut(s) 913, 1137, 1375
SmiI ATTTAAAT 1 cut(s) 1048
SmlI CTYRAG 2 cut(s) 52, 368
SmoI CTYRAG 2 cut(s) 52, 368
SphI GCATGC 1 cut(s) 1097
Sse9I AATT 9 cut(s) 12, 31, 99, 125, 599, 697, 756, 1230, 1331
SsiI CCGC 4 cut(s) 574, 675, 901, 1025
SspI AATATT 1 cut(s) 1044
SspMI CTAG 3 cut(s) 642, 800, 1350
StyD4I CCNGG 2 cut(s) 1367, 1394
StyI CCWWGG 2 cut(s) 589, 657
SwaI ATTTAAAT 1 cut(s) 1048
TaiI ACGT 1 cut(s) 1230
TaqI TCGA 5 cut(s) 137, 680, 723, 863, 1266
TaqII GACCGA 1 cut(s) 1001
TasI AATT 9 cut(s) 12, 31, 99, 125, 599, 697, 756, 1230, 1331
TatI WGTACW 1 cut(s) 448
TauI GCSGC 2 cut(s) 677, 1028
TfiI GAWTC 4 cut(s) 182, 489, 585, 1062
Tru1I TTAA 4 cut(s) 105, 345, 1047, 1107
Tru9I TTAA 4 cut(s) 105, 345, 1047, 1107
TscAI CASTG 2 cut(s) 42, 276
TseFI GTSAC 2 cut(s) 1201, 1276
TseI GCWGC 3 cut(s) 530, 563, 833
Tsp45I GTSAC 2 cut(s) 1201, 1276
TspDTI ATGAA 4 cut(s) 330, 769, 1182, 1302
TspGWI ACGGA 2 cut(s) 890, 1330
TspRI CASTG 2 cut(s) 42, 276
Van91I CCANNNNNTGG 2 cut(s) 159, 275
VpaK11BI GGWCC 3 cut(s) 913, 1137, 1375
XapI RAATTY 4 cut(s) 12, 99, 697, 1331
XceI RCATGY 2 cut(s) 794, 1097
XcmI CCANNNNNNNNNTGG 2 cut(s) 156, 182
XspI CTAG 3 cut(s) 642, 800, 1350
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.