pycom07g07950

BAHD acyltransferase At5g47980-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0000722
Physical Location & Seq
Forward (+)
7294720 .. 7296153
1434 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g07950.1

Sequence Viewer

Length: 1434 bp
ATGGCAATTCGACATGGTACAGTACTCAGTAGTTGTGATATCAATTCACTGGTGGAAATAACCTCAAGAAAGACCATCAAACCATCATCTCCAACTCCTCCTCACAATAGAATTCTTAACCTCTCTCTTGTGGACCAACTTATGCCTTCTACTTTATATGGAACCATCCTATGGTTCTTCCCAAACCACAATGCTTCGGATTTTGCTTCCAAACCTTCAGAGAGTACTACAAGAAAATCTAAACGCTTGCAAGATTCTCTATCCAAAACTCTAGTTCATTTCTATCCAATGGCTGGCCAACTCAAAAGCCCGGCGTTAGTTGAGTGCAATGATGAAGGGGCTCATTTTCTGGAAGCCCGAGTTAACTGCCAGCTTTCAGACCTTCTCAGACAACCCAATCCCGAGTTACTCGACCGCTTAAAGGCCCTAAATGATCCTGAAACTGCCAACGTAGCTTTGGGATCTACACTTTTGCTGGTTCAAATCAGCGTTTTCAACTGTGGAGGAATTGTTGTTGCTGTGTCCCCTTCGCACAAGATTGCAGATGCAGCATCAGTCCTCACGTTCGTGCAAGCATGGGCAGCGATAAATCGTGATGATGGAGCCCTCGGACAGCAATTGGTTCCGCCGGAGTTTATTGGAGGGTCTTTGTTGCCGCCTAGAGAGCTATCCTTGCCGTCCATCAAGGGATCCTTGGAAATCCAGAGTCAAAGTTTAGTTGCAAGAAGGTTTGTATTCGATGTCTCGAAGGTAGTCAGTCTCAAGACAAAAATTGGAAGTGTTGTCCAAACCTTCATCCCATCAACCATACAACTTGTTTTGGCTATGATTTTGAGATGTTCTATTGCTGCTTCTCATCAGTGCAAGCCTGAGAGTTCGATCAAGCCAACGGTGGTGTCCCAAATGGTGAGCTTCCGCAAAAGAATCATCCCGGAGATATCAGAAAATGTCATGGGGAATTGGTTTTGGACAATTCCAGTGTTGTTAAAAGAAAATGAGACTGAATTACACGATTTGGTGAGCAAAATGACGCAAGGAGTGACAGAATTTCGCAATGAGAAGGCCAGCGGATTTAAAGGTGAGAATGGATTCTTAGTGGTATCTGAGTCTCTAAGAAAGAGTGCTGATATTTTTAATAGCAATAACATCGTAAATGTTTATAAAACCACAAGTTTGTGCCAGCTTCCTCTGTATGAAATAGATTTTGGATGGGAGAAACCTGCGTGGGTCACCAGCCTAAGTGTCCTCAAGAACATAATTGTTTTGGTTGCCACAAAAGAGCAAGATGGTATCGAAGCTTGGGTGACCCTGGATGAAAAAGAAATGGCCATATTTGAGTCTGATCAAGAGCTTCTTGCATTTTGTTCTGTCAACCCCAGCATTGGCCATTCCGGGTTGGTCCAGGGTTTTCCAAGGACCATGGCGAGGATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110
Pfam Domains
Protein Families
Transferase

Protein Analysis

478

Amino Acids

52.5

Weight (kDa)

6.77

Isoelectric Point (pI)

41.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 18 - 451 1.4e-71 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1161
Acc36I ACCTGC 1 cut(s) 1228
AccB7I CCANNNNNTGG 2 cut(s) 171, 293
AciI CCGC 5 cut(s) 415, 626, 656, 916, 1068
AclWI GGATC 4 cut(s) 428, 469, 684, 697
AcoI YGGCCR 3 cut(s) 295, 1326, 1384
AcsI RAATTY 2 cut(s) 111, 1046
AcuI CTGAAG 1 cut(s) 201
AfaI GTAC 3 cut(s) 19, 24, 226
AfiI CCNNNNNNNGG 5 cut(s) 171, 293, 421, 1382, 1425
AgsI TTSAA 2 cut(s) 482, 496
AjnI CCWGG 2 cut(s) 1308, 1401
AjuI GAANNNNNNNTTGG 2 cut(s) 1188, 1220
AleI CACNNNNGTG 1 cut(s) 566
AluBI AGCT 7 cut(s) 373, 455, 667, 912, 1183, 1298, 1351
AluI AGCT 7 cut(s) 373, 455, 667, 912, 1183, 1298, 1351
Alw26I GTCTC 4 cut(s) 748, 764, 992, 1113
AlwI GGATC 4 cut(s) 428, 469, 684, 697
Ama87I CYCGRG 2 cut(s) 357, 401
AoxI GGCC 5 cut(s) 295, 423, 1062, 1326, 1384
ApeKI GCWGC 3 cut(s) 548, 581, 848
ApoI RAATTY 2 cut(s) 111, 1046
Asp700I GAANNNNTTC 1 cut(s) 1088
AspS9I GGNCC 4 cut(s) 133, 424, 1399, 1416
AsuC2I CCSGG 3 cut(s) 311, 932, 1393
AsuHPI GGTGA 5 cut(s) 919, 1030, 1091, 1222, 1315
AvaI CYCGRG 2 cut(s) 357, 401
AvaII GGWCC 3 cut(s) 133, 1399, 1416
BalI TGGCCA 3 cut(s) 297, 1328, 1386
BamHI GGATCC 1 cut(s) 689
BanII GRGCYC 2 cut(s) 343, 607
BbvI GCAGC 3 cut(s) 560, 593, 835
BccI CCATC 8 cut(s) 83, 91, 173, 593, 689, 808, 1203, 1280
BceAI ACGGC 1 cut(s) 661
BcgI CGANNNNNNTGC 4 cut(s) 348, 382, 1129, 1163
BciT130I CCWGG 2 cut(s) 1310, 1403
BclI TGATCA 1 cut(s) 1342
BcnI CCSGG 3 cut(s) 311, 932, 1393
BcoDI GTCTC 4 cut(s) 748, 764, 992, 1113
BfaI CTAG 2 cut(s) 272, 660
BfuAI ACCTGC 1 cut(s) 1228
BisI GCNGC 4 cut(s) 549, 582, 656, 849
BlsI GCNGC 4 cut(s) 550, 583, 657, 850
BmcAI AGTACT 2 cut(s) 24, 226
Bme1390I CCNGG 5 cut(s) 311, 932, 1310, 1393, 1403
Bme18I GGWCC 3 cut(s) 133, 1399, 1416
BmeT110I CYCGRG 2 cut(s) 357, 401
BmgT120I GGNCC 4 cut(s) 133, 424, 1399, 1416
BmiI GGNNCC 4 cut(s) 163, 604, 624, 691
BmrFI CCNGG 5 cut(s) 311, 932, 1310, 1393, 1403
BmsI GCATC 2 cut(s) 535, 560
BpuEI CTTGAG 3 cut(s) 49, 746, 1232
BpuMI CCSGG 3 cut(s) 311, 932, 1393
BsaJI CCNNGG 6 cut(s) 607, 693, 1308, 1402, 1412, 1419
BsaXI ACNNNNNCTCC 2 cut(s) 495, 525
Bsc4I CCNNNNNNNGG 5 cut(s) 171, 293, 421, 1382, 1425
Bse1I ACTGG 2 cut(s) 54, 977
Bse3DI GCAATG 2 cut(s) 334, 1060
BseBI CCWGG 2 cut(s) 1310, 1403
BseDI CCNNGG 6 cut(s) 607, 693, 1308, 1402, 1412, 1419
BseGI GGATG 5 cut(s) 165, 795, 927, 1214, 1318
BseLI CCNNNNNNNGG 5 cut(s) 171, 293, 421, 1382, 1425
BseMI GCAATG 2 cut(s) 334, 1060
BseMII CTCAG 4 cut(s) 40, 400, 861, 1095
BseNI ACTGG 2 cut(s) 54, 977
BseRI GAGGAG 2 cut(s) 87, 90
BseXI GCAGC 3 cut(s) 560, 593, 835
BseYI CCCAGC 1 cut(s) 1376
Bsh1285I CGRYCG 1 cut(s) 415
BshFI GGCC 5 cut(s) 297, 425, 1064, 1328, 1386
BsiEI CGRYCG 1 cut(s) 415
BsiHKCI CYCGRG 2 cut(s) 357, 401
BsiSI CCGG 4 cut(s) 311, 629, 932, 1392
BslFI GGGAC 2 cut(s) 508, 883
BslI CCNNNNNNNGG 5 cut(s) 171, 293, 421, 1382, 1425
BsmAI GTCTC 4 cut(s) 748, 764, 992, 1113
BsmFI GGGAC 2 cut(s) 508, 883
BsnI GGCC 5 cut(s) 297, 425, 1064, 1328, 1386
BsoBI CYCGRG 2 cut(s) 357, 401
Bsp1286I GDGCHC 2 cut(s) 343, 607
Bsp143I GATC 5 cut(s) 433, 461, 689, 879, 1342
Bsp19I CCATGG 1 cut(s) 1419
BspACI CCGC 5 cut(s) 415, 626, 656, 916, 1068
BspANI GGCC 5 cut(s) 297, 425, 1064, 1328, 1386
BspCNI CTCAG 4 cut(s) 39, 399, 862, 1096
BspLI GGNNCC 4 cut(s) 163, 604, 624, 691
BspMI ACCTGC 1 cut(s) 1228
BspPI GGATC 4 cut(s) 428, 469, 684, 697
BsrDI GCAATG 2 cut(s) 334, 1060
BsrI ACTGG 2 cut(s) 54, 977
BssECI CCNNGG 6 cut(s) 607, 693, 1308, 1402, 1412, 1419
BssMI GATC 5 cut(s) 433, 461, 689, 879, 1342
BssT1I CCWWGG 3 cut(s) 693, 1412, 1419
Bst2UI CCWGG 2 cut(s) 1310, 1403
Bst4CI ACNGT 3 cut(s) 22, 500, 892
BstC8I GCNNGC 7 cut(s) 248, 295, 371, 573, 866, 1066, 1181
BstDEI CTNAG 7 cut(s) 26, 386, 870, 1093, 1104, 1112, 1238
BstDSI CCRYGG 1 cut(s) 1419
BstEII GGTNACC 2 cut(s) 1228, 1303
BstF5I GGATG 5 cut(s) 165, 795, 927, 1214, 1318
BstKTI GATC 5 cut(s) 436, 464, 692, 882, 1345
BstMAI GTCTC 4 cut(s) 748, 764, 992, 1113
BstMBI GATC 5 cut(s) 433, 461, 689, 879, 1342
BstMCI CGRYCG 1 cut(s) 415
BstMWI GCNNNNNNNGC 5 cut(s) 452, 548, 581, 664, 673
BstNI CCWGG 2 cut(s) 1310, 1403
BstPI GGTNACC 2 cut(s) 1228, 1303
BstSCI CCNGG 5 cut(s) 309, 930, 1308, 1391, 1401
BstV1I GCAGC 3 cut(s) 560, 593, 835
BstX2I RGATCY 2 cut(s) 461, 689
BstYI RGATCY 2 cut(s) 461, 689
BsuRI GGCC 5 cut(s) 297, 425, 1064, 1328, 1386
BtgI CCRYGG 1 cut(s) 1419
BtsCI GGATG 5 cut(s) 165, 795, 927, 1214, 1318
BtsIMutI CAGTG 3 cut(s) 47, 866, 984
BveI ACCTGC 1 cut(s) 1228
Cac8I GCNNGC 7 cut(s) 248, 295, 371, 573, 866, 1066, 1181
Cfr13I GGNCC 4 cut(s) 133, 424, 1399, 1416
CseI GACGC 1 cut(s) 1039
Csp6I GTAC 3 cut(s) 18, 23, 225
CviAII CATG 4 cut(s) 14, 576, 952, 1420
CviQI GTAC 3 cut(s) 18, 23, 225
DdeI CTNAG 7 cut(s) 26, 386, 870, 1093, 1104, 1112, 1238
DpnI GATC 5 cut(s) 435, 463, 691, 881, 1344
DpnII GATC 5 cut(s) 433, 461, 689, 879, 1342
DraI TTTAAA 1 cut(s) 1075
EaeI YGGCCR 3 cut(s) 295, 1326, 1384
EciI GGCGGA 1 cut(s) 615
Eco130I CCWWGG 3 cut(s) 693, 1412, 1419
Eco24I GRGCYC 2 cut(s) 343, 607
Eco32I GATATC 2 cut(s) 40, 939
Eco47I GGWCC 3 cut(s) 133, 1399, 1416
Eco57I CTGAAG 1 cut(s) 201
Eco88I CYCGRG 2 cut(s) 357, 401
Eco91I GGTNACC 2 cut(s) 1228, 1303
EcoO109I RGGNCCY 1 cut(s) 424
EcoO65I GGTNACC 2 cut(s) 1228, 1303
EcoRI GAATTC 1 cut(s) 111
EcoRII CCWGG 2 cut(s) 1308, 1401
EcoRV GATATC 2 cut(s) 40, 939
EcoT14I CCWWGG 3 cut(s) 693, 1412, 1419
EcoT38I GRGCYC 2 cut(s) 343, 607
ErhI CCWWGG 3 cut(s) 693, 1412, 1419
FaeI CATG 4 cut(s) 17, 579, 955, 1423
FalI AAGNNNNNCTT 4 cut(s) 677, 709, 1338, 1370
FaqI GGGAC 2 cut(s) 508, 883
FatI CATG 4 cut(s) 13, 575, 951, 1419
FbaI TGATCA 1 cut(s) 1342
Fnu4HI GCNGC 4 cut(s) 549, 582, 656, 849
FokI GGATG 5 cut(s) 152, 782, 914, 1221, 1325
FriOI GRGCYC 2 cut(s) 343, 607
Fsp4HI GCNGC 4 cut(s) 549, 582, 656, 849
FspBI CTAG 2 cut(s) 272, 660
GluI GCNGC 4 cut(s) 549, 582, 656, 849
GsaI CCCAGC 1 cut(s) 1380
HaeIII GGCC 5 cut(s) 297, 425, 1064, 1328, 1386
HapII CCGG 4 cut(s) 311, 629, 932, 1392
HgaI GACGC 1 cut(s) 1039
Hin1II CATG 4 cut(s) 17, 579, 955, 1423
HincII GTYRAC 2 cut(s) 364, 1372
HindII GTYRAC 2 cut(s) 364, 1372
HindIII AAGCTT 1 cut(s) 1296
HinfI GANTC 6 cut(s) 254, 706, 924, 1089, 1106, 1337
HpaI GTTAAC 1 cut(s) 364
HpaII CCGG 4 cut(s) 311, 629, 932, 1392
HphI GGTGA 5 cut(s) 919, 1030, 1091, 1222, 1315
Hpy166II GTNNAC 3 cut(s) 133, 364, 1372
Hpy188I TCNGA 8 cut(s) 199, 220, 379, 389, 611, 943, 1105, 1342
Hpy8I GTNNAC 3 cut(s) 133, 364, 1372
HpyAV CCTTC 9 cut(s) 156, 225, 329, 392, 537, 720, 742, 802, 1054
HpyCH4III ACNGT 3 cut(s) 22, 500, 892
HpyCH4IV ACGT 2 cut(s) 450, 563
HpyCH4V TGCA 8 cut(s) 250, 327, 542, 548, 571, 722, 864, 1358
HpyF10VI GCNNNNNNNGC 5 cut(s) 452, 548, 581, 664, 673
HpyF3I CTNAG 7 cut(s) 26, 386, 870, 1093, 1104, 1112, 1238
HpySE526I ACGT 2 cut(s) 450, 563
Hsp92II CATG 4 cut(s) 17, 579, 955, 1423
Ksp22I TGATCA 1 cut(s) 1342
KspAI GTTAAC 1 cut(s) 364
Kzo9I GATC 5 cut(s) 433, 461, 689, 879, 1342
LmnI GCTCC 1 cut(s) 602
Lsp1109I GCAGC 3 cut(s) 560, 593, 835
LweI GCATC 2 cut(s) 535, 560
MaeI CTAG 2 cut(s) 272, 660
MaeII ACGT 2 cut(s) 450, 563
MaeIII GTNAC 4 cut(s) 405, 1039, 1228, 1303
MalI GATC 5 cut(s) 435, 463, 691, 881, 1344
MboI GATC 5 cut(s) 433, 461, 689, 879, 1342
MboII GAAGA 1 cut(s) 169
MfeI CAATTG 1 cut(s) 617
MflI RGATCY 2 cut(s) 461, 689
MhlI GDGCHC 2 cut(s) 343, 607
MlsI TGGCCA 3 cut(s) 297, 1328, 1386
MluNI TGGCCA 3 cut(s) 297, 1328, 1386
MlyI GAGTC 3 cut(s) 715, 1115, 1346
MmeI TCCRAC 1 cut(s) 116
Mox20I TGGCCA 3 cut(s) 297, 1328, 1386
MroXI GAANNNNTTC 1 cut(s) 1088
MscI TGGCCA 3 cut(s) 297, 1328, 1386
MseI TTAA 6 cut(s) 117, 363, 419, 986, 1074, 1134
MslI CAYNNNNRTG 1 cut(s) 566
Msp20I TGGCCA 3 cut(s) 297, 1328, 1386
MspA1I CMGCKG 1 cut(s) 1068
MspI CCGG 4 cut(s) 311, 629, 932, 1392
MspR9I CCNGG 5 cut(s) 311, 932, 1310, 1393, 1403
MunI CAATTG 1 cut(s) 617
MvaI CCWGG 2 cut(s) 1310, 1403
MwoI GCNNNNNNNGC 5 cut(s) 452, 548, 581, 664, 673
NciI CCSGG 3 cut(s) 311, 932, 1393
NcoI CCATGG 1 cut(s) 1419
NdeII GATC 5 cut(s) 433, 461, 689, 879, 1342
NlaIII CATG 4 cut(s) 17, 579, 955, 1423
NlaIV GGNNCC 4 cut(s) 163, 604, 624, 691
NmuCI GTSAC 3 cut(s) 1039, 1228, 1303
OliI CACNNNNGTG 1 cut(s) 566
PdmI GAANNNNTTC 1 cut(s) 1088
PfeI GAWTC 3 cut(s) 254, 924, 1089
PflMI CCANNNNNTGG 2 cut(s) 171, 293
PfoI TCCNGGA 1 cut(s) 930
PkrI GCNGC 4 cut(s) 550, 583, 657, 850
PleI GAGTC 3 cut(s) 714, 1114, 1345
PpsI GAGTC 3 cut(s) 714, 1114, 1345
PsiI TTATAA 1 cut(s) 1161
Psp6I CCWGG 2 cut(s) 1308, 1401
PspEI GGTNACC 2 cut(s) 1228, 1303
PspFI CCCAGC 1 cut(s) 1376
PspGI CCWGG 2 cut(s) 1308, 1401
PspN4I GGNNCC 4 cut(s) 163, 604, 624, 691
PspPI GGNCC 4 cut(s) 133, 424, 1399, 1416
PsuI RGATCY 2 cut(s) 461, 689
RsaI GTAC 3 cut(s) 19, 24, 226
RsaNI GTAC 3 cut(s) 18, 23, 225
RseI CAYNNNNRTG 1 cut(s) 566
SaqAI TTAA 6 cut(s) 117, 363, 419, 986, 1074, 1134
SatI GCNGC 4 cut(s) 549, 582, 656, 849
Sau3AI GATC 5 cut(s) 433, 461, 689, 879, 1342
Sau96I GGNCC 4 cut(s) 133, 424, 1399, 1416
ScaI AGTACT 2 cut(s) 24, 226
SchI GAGTC 3 cut(s) 715, 1115, 1346
ScrFI CCNGG 5 cut(s) 311, 932, 1310, 1393, 1403
SduI GDGCHC 2 cut(s) 343, 607
SfaNI GCATC 2 cut(s) 535, 560
SinI GGWCC 3 cut(s) 133, 1399, 1416
SmiMI CAYNNNNRTG 1 cut(s) 566
SmlI CTYRAG 3 cut(s) 64, 761, 1247
SmoI CTYRAG 3 cut(s) 64, 761, 1247
SsiI CCGC 5 cut(s) 415, 626, 656, 916, 1068
SspMI CTAG 2 cut(s) 272, 660
StyD4I CCNGG 5 cut(s) 309, 930, 1308, 1391, 1401
StyI CCWWGG 3 cut(s) 693, 1412, 1419
TaaI ACNGT 3 cut(s) 22, 500, 892
TaiI ACGT 2 cut(s) 453, 566
TaqI TCGA 6 cut(s) 10, 411, 738, 746, 878, 1293
TatI WGTACW 2 cut(s) 22, 224
TauI GCSGC 1 cut(s) 658
TfiI GAWTC 3 cut(s) 254, 924, 1089
Tru1I TTAA 6 cut(s) 117, 363, 419, 986, 1074, 1134
Tru9I TTAA 6 cut(s) 117, 363, 419, 986, 1074, 1134
TscAI CASTG 3 cut(s) 54, 866, 984
TseFI GTSAC 3 cut(s) 1039, 1228, 1303
TseI GCWGC 3 cut(s) 548, 581, 848
Tsp45I GTSAC 3 cut(s) 1039, 1228, 1303
TspDTI ATGAA 5 cut(s) 266, 348, 784, 1209, 1329
TspRI CASTG 3 cut(s) 54, 866, 984
Van91I CCANNNNNTGG 2 cut(s) 171, 293
VpaK11BI GGWCC 3 cut(s) 133, 1399, 1416
XapI RAATTY 2 cut(s) 111, 1046
XcmI CCANNNNNNNNNTGG 1 cut(s) 454
XmnI GAANNNNTTC 1 cut(s) 1088
XspI CTAG 2 cut(s) 272, 660
ZrmI AGTACT 2 cut(s) 24, 226
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.