pycom07g07870

BAHD acyltransferase At5g47980-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
7172046 .. 7173479
1434 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g07870.1

Sequence Viewer

Length: 1434 bp
ATGGTGATTTTTCTTTCAAAGTTTCGGAGAATAGTAACCACCTACAGAAGAAGTCTCCATCCCATTAGATATGGAATATTATTCAGTTGTAATATCCATTCACTGGTAGAAATCACCTCAAGAAAAATCATCAAACCATCATCTCCAACTCCTCATCACAATAGATTTCTTAAGCTCTCTCTTCTGGACCAACTTATTCCTTCTACTTTAACTGCAACTATCATATGGTTATACAAAAACCCCAACGGTTCTAATTTTGCTGCCGAAACTTCAGAGACAAAATCTGAACGGTTGCAAGAGTCTTTATCAAAAGCTTTAGTTCACTTCTATCCACTGGCTGGCCGGCTCAAAAGCCCTGCATTGGTGGAGTGCAACGATGAAGGGGCTCATTTTCTTGAAGCCCGGGTTAACTGCCAGCTTTCAGACTTTCTGAAACAACCTGATATCAAATTACTCACCAACTTTATCCCCGACAATGATCCTAAAACCGCCCAAGAAGCCTTGGGATCTGTACTTTTGTTTATTCAAATCAGCGTTTTCAACTGTGGAGGAATTGTTGTTGCTGCATCACCTTCACACAAGCTTGCAGATGGAACATCACTCCACACATTCATGCGAACATGGGCAGCGATAAATTGCGAAGATAGAGTGCTTGGAGCTCAATTGGGGCCACCGGAGTTTACTGGAGGGTCTTTGTTGCCTCCTAGAGAGTTGTCCTTGCCATCCATCAACGCCAGCATGGAAATCCAAAGTTTAACTACAAGAAGGCTTGTATTCGATATTTCAAAGATAGCCAGCCTCAAGTCTAATAATGGGGGTGTGGTCCAGACCTTCATCCCATCAAACATAAATCTAGTTTTGGCTATCATATTGAAATGTTCTATTGCTGCTTCCCGTCATTTCAAGCCTGAGAGTTGGATGAGACCAATGGTGCTGACCCAGATGATAAGCTTGCGAAGAAGTATTGTCCCGGAGATACTGGAAAATGTCATGGGGAATTGGTTTTGGTCACATCCATTGTTATTCAAAGAAAATGAGACCGAACTACACGAGTTAGTGAGCAAAATGATGCAAGGATTGACAGACTTTCGGGCCAAGAAGGCCAACAGATTTAAAGGCGAGGAGGGATTCTTGGTGGTATCTGAGTCTCAGAGAGAAAGGGCGGATCTTTATAAGAGAAATAAGGGCTTATATGGATTTTGGGCGACGAGTCTGTGCAAACTTCCTCTGTATGAAATCGATTTTGGTTGGGGGAAACCTGCGTGGGTCACCAGCCCAGGTGTCAGAAAGAACCTAATTCTGTTGGCTGACACAAAACAGCACGATGGTATCGAAGCGTGGGTGACCTTGGATGAACAAGAAATGGCCATATTTGAATGTGATCCGGATCTTCTTGCATTTGGTTCCGTGAACCCCAGCATTTCCCTTGGTTAA

Protein Analysis

478

Amino Acids

53.49

Weight (kDa)

8.79

Isoelectric Point (pI)

38.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 36 - 463 2.2e-70 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1173
Acc36I ACCTGC 1 cut(s) 1267
AccB7I CCANNNNNTGG 2 cut(s) 103, 338
AccIII TCCGGA 1 cut(s) 1384
AciI CCGC 2 cut(s) 489, 1163
AclWI GGATC 5 cut(s) 473, 514, 1173, 1376, 1395
AcoI YGGCCR 2 cut(s) 340, 1365
AcuI CTGAAG 1 cut(s) 255
AfaI GTAC 1 cut(s) 513
AfiI CCNNNNNNNGG 3 cut(s) 103, 338, 361
AflII CTTAAG 1 cut(s) 170
AgsI TTSAA 9 cut(s) 18, 398, 527, 541, 786, 874, 904, 1027, 1376
AjnI CCWGG 1 cut(s) 1276
AjuI GAANNNNNNNTTGG 2 cut(s) 1227, 1259
AluBI AGCT 6 cut(s) 175, 314, 418, 583, 659, 951
AluI AGCT 6 cut(s) 175, 314, 418, 583, 659, 951
Alw21I GWGCWC 1 cut(s) 661
Alw26I GTCTC 5 cut(s) 59, 269, 916, 1031, 1152
AlwI GGATC 5 cut(s) 473, 514, 1173, 1376, 1395
Ama87I CYCGRG 1 cut(s) 402
Aor13HI TCCGGA 1 cut(s) 1384
AoxI GGCC 5 cut(s) 340, 668, 1092, 1101, 1365
ApeKI GCWGC 4 cut(s) 260, 563, 626, 887
AspS9I GGNCC 4 cut(s) 187, 668, 823, 1092
AsuC2I CCSGG 3 cut(s) 403, 404, 971
AsuHPI GGTGA 6 cut(s) 16, 106, 448, 561, 1261, 1354
AvaI CYCGRG 1 cut(s) 402
AvaII GGWCC 2 cut(s) 187, 823
BaeI ACNNNNGTAYC 2 cut(s) 1312, 1345
BalI TGGCCA 1 cut(s) 1367
BanII GRGCYC 2 cut(s) 388, 661
BauI CACGAG 1 cut(s) 1049
Bbv12I GWGCWC 1 cut(s) 661
BbvI GCAGC 4 cut(s) 247, 550, 638, 874
BccI CCATC 7 cut(s) 66, 145, 584, 730, 734, 847, 1319
BciT130I CCWGG 1 cut(s) 1278
BcnI CCSGG 3 cut(s) 403, 404, 971
BcoDI GTCTC 5 cut(s) 59, 269, 916, 1031, 1152
BfaI CTAG 2 cut(s) 705, 854
BfmI CTRYAG 1 cut(s) 43
BfrI CTTAAG 1 cut(s) 170
BfuAI ACCTGC 1 cut(s) 1267
BglI GCCNNNNNGGC 1 cut(s) 1100
BisI GCNGC 4 cut(s) 261, 564, 627, 888
BlsI GCNGC 4 cut(s) 262, 565, 628, 889
Bme1390I CCNGG 4 cut(s) 403, 404, 971, 1278
Bme18I GGWCC 2 cut(s) 187, 823
BmeT110I CYCGRG 1 cut(s) 402
BmgT120I GGNCC 4 cut(s) 187, 668, 823, 1092
BmiI GGNNCC 2 cut(s) 669, 1405
BmrFI CCNGG 4 cut(s) 403, 404, 971, 1278
BmsI GCATC 2 cut(s) 575, 1059
BpmI CTGGAG 1 cut(s) 705
BpuEI CTTGAG 2 cut(s) 103, 785
BpuMI CCSGG 3 cut(s) 403, 404, 971
Bsa29I ATCGAT 1 cut(s) 1239
BsaBI GATNNNNATC 1 cut(s) 1386
BsaI GGTCTC 2 cut(s) 916, 1031
BsaJI CCNNGG 5 cut(s) 402, 501, 1276, 1347, 1426
BsaWI WCCGGW 2 cut(s) 673, 1384
BsaXI ACNNNNNCTCC 2 cut(s) 540, 570
Bsc4I CCNNNNNNNGG 3 cut(s) 103, 338, 361
Bse118I RCCGGY 1 cut(s) 342
Bse1I ACTGG 4 cut(s) 108, 339, 688, 984
Bse8I GATNNNNATC 1 cut(s) 1386
BseAI TCCGGA 1 cut(s) 1384
BseBI CCWGG 1 cut(s) 1278
BseCI ATCGAT 1 cut(s) 1239
BseDI CCNNGG 5 cut(s) 402, 501, 1276, 1347, 1426
BseGI GGATG 6 cut(s) 58, 722, 834, 924, 1012, 1357
BseJI GATNNNNATC 1 cut(s) 1386
BseLI CCNNNNNNNGG 3 cut(s) 103, 338, 361
BseMII CTCAG 3 cut(s) 900, 1134, 1163
BseNI ACTGG 4 cut(s) 108, 339, 688, 984
BseRI GAGGAG 2 cut(s) 141, 1136
BseXI GCAGC 4 cut(s) 247, 550, 638, 874
BseYI CCCAGC 1 cut(s) 1415
BshFI GGCC 5 cut(s) 342, 670, 1094, 1103, 1367
BshVI ATCGAT 1 cut(s) 1239
BsiHKAI GWGCWC 1 cut(s) 661
BsiHKCI CYCGRG 1 cut(s) 402
BsiSI CCGG 5 cut(s) 343, 403, 674, 971, 1385
BslFI GGGAC 1 cut(s) 953
BslI CCNNNNNNNGG 3 cut(s) 103, 338, 361
BsmAI GTCTC 5 cut(s) 59, 269, 916, 1031, 1152
BsmFI GGGAC 1 cut(s) 953
BsnI GGCC 5 cut(s) 342, 670, 1094, 1103, 1367
Bso31I GGTCTC 2 cut(s) 916, 1031
BsoBI CYCGRG 1 cut(s) 402
Bsp1286I GDGCHC 2 cut(s) 388, 661
Bsp13I TCCGGA 1 cut(s) 1384
Bsp143I GATC 5 cut(s) 478, 506, 1165, 1381, 1387
BspACI CCGC 2 cut(s) 489, 1163
BspANI GGCC 5 cut(s) 342, 670, 1094, 1103, 1367
BspCNI CTCAG 3 cut(s) 901, 1135, 1162
BspDI ATCGAT 1 cut(s) 1239
BspEI TCCGGA 1 cut(s) 1384
BspLI GGNNCC 2 cut(s) 669, 1405
BspMI ACCTGC 1 cut(s) 1267
BspPI GGATC 5 cut(s) 473, 514, 1173, 1376, 1395
BspTI CTTAAG 1 cut(s) 170
BspTNI GGTCTC 2 cut(s) 916, 1031
BsrFI RCCGGY 1 cut(s) 342
BsrI ACTGG 4 cut(s) 108, 339, 688, 984
BssAI RCCGGY 1 cut(s) 342
BssECI CCNNGG 5 cut(s) 402, 501, 1276, 1347, 1426
BssMI GATC 5 cut(s) 478, 506, 1165, 1381, 1387
BssSI CACGAG 1 cut(s) 1049
BssT1I CCWWGG 3 cut(s) 501, 1347, 1426
Bst2BI CACGAG 1 cut(s) 1049
Bst2UI CCWGG 1 cut(s) 1278
Bst4CI ACNGT 3 cut(s) 248, 291, 545
Bst6I CTCTTC 1 cut(s) 186
BstAFI CTTAAG 1 cut(s) 170
BstC8I GCNNGC 7 cut(s) 340, 344, 416, 585, 736, 796, 953
BstDEI CTNAG 3 cut(s) 909, 1143, 1149
BstEII GGTNACC 2 cut(s) 1267, 1342
BstF5I GGATG 6 cut(s) 58, 722, 834, 924, 1012, 1357
BstKTI GATC 5 cut(s) 481, 509, 1168, 1384, 1390
BstMAI GTCTC 5 cut(s) 59, 269, 916, 1031, 1152
BstMBI GATC 5 cut(s) 478, 506, 1165, 1381, 1387
BstMWI GCNNNNNNNGC 2 cut(s) 497, 1100
BstNI CCWGG 1 cut(s) 1278
BstPI GGTNACC 2 cut(s) 1267, 1342
BstSCI CCNGG 4 cut(s) 401, 402, 969, 1276
BstSFI CTRYAG 1 cut(s) 43
BstV1I GCAGC 4 cut(s) 247, 550, 638, 874
BstX2I RGATCY 3 cut(s) 506, 1165, 1387
BstYI RGATCY 3 cut(s) 506, 1165, 1387
Bsu15I ATCGAT 1 cut(s) 1239
BsuRI GGCC 5 cut(s) 342, 670, 1094, 1103, 1367
BsuTUI ATCGAT 1 cut(s) 1239
BtsCI GGATG 6 cut(s) 58, 722, 834, 924, 1012, 1357
BtsIMutI CAGTG 2 cut(s) 101, 332
BveI ACCTGC 1 cut(s) 1267
Cac8I GCNNGC 7 cut(s) 340, 344, 416, 585, 736, 796, 953
Cfr10I RCCGGY 1 cut(s) 342
Cfr13I GGNCC 4 cut(s) 187, 668, 823, 1092
Cfr9I CCCGGG 1 cut(s) 402
ClaI ATCGAT 1 cut(s) 1239
Csp6I GTAC 1 cut(s) 512
CviAII CATG 4 cut(s) 613, 621, 739, 991
CviQI GTAC 1 cut(s) 512
DdeI CTNAG 3 cut(s) 909, 1143, 1149
DpnI GATC 5 cut(s) 480, 508, 1167, 1383, 1389
DpnII GATC 5 cut(s) 478, 506, 1165, 1381, 1387
DraI TTTAAA 1 cut(s) 1114
EaeI YGGCCR 2 cut(s) 340, 1365
Eam1104I CTCTTC 1 cut(s) 186
EarI CTCTTC 1 cut(s) 186
EciI GGCGGA 1 cut(s) 1178
Ecl136II GAGCTC 1 cut(s) 659
Eco130I CCWWGG 3 cut(s) 501, 1347, 1426
Eco24I GRGCYC 2 cut(s) 388, 661
Eco31I GGTCTC 2 cut(s) 916, 1031
Eco32I GATATC 1 cut(s) 445
Eco47I GGWCC 2 cut(s) 187, 823
Eco53kI GAGCTC 1 cut(s) 659
Eco57I CTGAAG 1 cut(s) 255
Eco88I CYCGRG 1 cut(s) 402
Eco91I GGTNACC 2 cut(s) 1267, 1342
EcoICRI GAGCTC 1 cut(s) 659
EcoO65I GGTNACC 2 cut(s) 1267, 1342
EcoRII CCWGG 1 cut(s) 1276
EcoRV GATATC 1 cut(s) 445
EcoT14I CCWWGG 3 cut(s) 501, 1347, 1426
EcoT38I GRGCYC 2 cut(s) 388, 661
ErhI CCWWGG 3 cut(s) 501, 1347, 1426
FaeI CATG 4 cut(s) 616, 624, 742, 994
FaqI GGGAC 1 cut(s) 953
FatI CATG 4 cut(s) 612, 620, 738, 990
FauNDI CATATG 1 cut(s) 224
Fnu4HI GCNGC 4 cut(s) 261, 564, 627, 888
FokI GGATG 6 cut(s) 45, 709, 821, 931, 999, 1364
FriOI GRGCYC 2 cut(s) 388, 661
Fsp4HI GCNGC 4 cut(s) 261, 564, 627, 888
FspBI CTAG 2 cut(s) 705, 854
GluI GCNGC 4 cut(s) 261, 564, 627, 888
GsaI CCCAGC 1 cut(s) 1419
GsuI CTGGAG 1 cut(s) 705
HaeIII GGCC 5 cut(s) 342, 670, 1094, 1103, 1367
HapII CCGG 5 cut(s) 343, 403, 674, 971, 1385
Hin1II CATG 4 cut(s) 616, 624, 742, 994
HincII GTYRAC 1 cut(s) 409
HindII GTYRAC 1 cut(s) 409
HindIII AAGCTT 3 cut(s) 312, 581, 949
HinfI GANTC 4 cut(s) 299, 1128, 1145, 1210
HpaI GTTAAC 1 cut(s) 409
HpaII CCGG 5 cut(s) 343, 403, 674, 971, 1385
HphI GGTGA 6 cut(s) 16, 106, 448, 561, 1261, 1354
Hpy166II GTNNAC 4 cut(s) 322, 409, 681, 1411
Hpy188I TCNGA 8 cut(s) 27, 274, 286, 424, 432, 1144, 1152, 1286
Hpy188III TCNNGA 5 cut(s) 120, 185, 395, 826, 1385
Hpy8I GTNNAC 4 cut(s) 322, 409, 681, 1411
Hpy99I CGWCG 1 cut(s) 1210
HpyAV CCTTC 6 cut(s) 210, 374, 582, 759, 841, 1093
HpyCH4III ACNGT 3 cut(s) 248, 291, 545
HpyCH4V TGCA 9 cut(s) 215, 295, 359, 372, 566, 587, 1072, 1218, 1397
HpyF10VI GCNNNNNNNGC 2 cut(s) 497, 1100
HpyF3I CTNAG 3 cut(s) 909, 1143, 1149
Hsp92II CATG 4 cut(s) 616, 624, 742, 994
Kpn2I TCCGGA 1 cut(s) 1384
KroI GCCGGC 1 cut(s) 342
KroNI GCCGGC 1 cut(s) 344
KspAI GTTAAC 1 cut(s) 409
Kzo9I GATC 5 cut(s) 478, 506, 1165, 1381, 1387
LmnI GCTCC 1 cut(s) 656
Lsp1109I GCAGC 4 cut(s) 247, 550, 638, 874
LweI GCATC 2 cut(s) 575, 1059
MaeI CTAG 2 cut(s) 705, 854
MaeIII GTNAC 4 cut(s) 34, 1008, 1267, 1342
MalI GATC 5 cut(s) 480, 508, 1167, 1383, 1389
MboI GATC 5 cut(s) 478, 506, 1165, 1381, 1387
MboII GAAGA 5 cut(s) 60, 173, 653, 969, 1382
MfeI CAATTG 1 cut(s) 662
MflI RGATCY 3 cut(s) 506, 1165, 1387
MhlI GDGCHC 2 cut(s) 388, 661
MlsI TGGCCA 1 cut(s) 1367
MluCI AATT 7 cut(s) 253, 449, 552, 634, 662, 997, 1296
MluNI TGGCCA 1 cut(s) 1367
MlyI GAGTC 3 cut(s) 308, 1154, 1219
MmeI TCCRAC 2 cut(s) 170, 896
MnlI CCTC 9 cut(s) 127, 162, 542, 680, 711, 809, 1114, 1117, 1236
Mox20I TGGCCA 1 cut(s) 1367
MroI TCCGGA 1 cut(s) 1384
MroNI GCCGGC 1 cut(s) 342
MscI TGGCCA 1 cut(s) 1367
MseI TTAA 6 cut(s) 171, 209, 408, 755, 1113, 1432
MslI CAYNNNNRTG 1 cut(s) 611
Msp20I TGGCCA 1 cut(s) 1367
MspCI CTTAAG 1 cut(s) 170
MspI CCGG 5 cut(s) 343, 403, 674, 971, 1385
MspR9I CCNGG 4 cut(s) 403, 404, 971, 1278
MunI CAATTG 1 cut(s) 662
MvaI CCWGG 1 cut(s) 1278
MwoI GCNNNNNNNGC 2 cut(s) 497, 1100
NaeI GCCGGC 1 cut(s) 344
NciI CCSGG 3 cut(s) 403, 404, 971
NdeI CATATG 1 cut(s) 224
NdeII GATC 5 cut(s) 478, 506, 1165, 1381, 1387
NgoMIV GCCGGC 1 cut(s) 342
NlaIII CATG 4 cut(s) 616, 624, 742, 994
NlaIV GGNNCC 2 cut(s) 669, 1405
NmuCI GTSAC 3 cut(s) 1008, 1267, 1342
PcsI WCGNNNNNNNCGW 1 cut(s) 1329
PdiI GCCGGC 1 cut(s) 344
PfeI GAWTC 1 cut(s) 1128
PflMI CCANNNNNTGG 2 cut(s) 103, 338
PfoI TCCNGGA 1 cut(s) 969
PkrI GCNGC 4 cut(s) 262, 565, 628, 889
PleI GAGTC 3 cut(s) 307, 1153, 1218
PpsI GAGTC 3 cut(s) 307, 1153, 1218
PsiI TTATAA 1 cut(s) 1173
Psp124BI GAGCTC 1 cut(s) 661
Psp6I CCWGG 1 cut(s) 1276
PspEI GGTNACC 2 cut(s) 1267, 1342
PspFI CCCAGC 1 cut(s) 1415
PspGI CCWGG 1 cut(s) 1276
PspN4I GGNNCC 2 cut(s) 669, 1405
PspPI GGNCC 4 cut(s) 187, 668, 823, 1092
PsuI RGATCY 3 cut(s) 506, 1165, 1387
RsaI GTAC 1 cut(s) 513
RsaNI GTAC 1 cut(s) 512
RseI CAYNNNNRTG 1 cut(s) 611
SacI GAGCTC 1 cut(s) 661
SaqAI TTAA 6 cut(s) 171, 209, 408, 755, 1113, 1432
SatI GCNGC 4 cut(s) 261, 564, 627, 888
Sau3AI GATC 5 cut(s) 478, 506, 1165, 1381, 1387
Sau96I GGNCC 4 cut(s) 187, 668, 823, 1092
SchI GAGTC 3 cut(s) 308, 1154, 1219
ScrFI CCNGG 4 cut(s) 403, 404, 971, 1278
SduI GDGCHC 2 cut(s) 388, 661
SfaNI GCATC 2 cut(s) 575, 1059
SfcI CTRYAG 1 cut(s) 43
SfiI GGCCNNNNNGGCC 1 cut(s) 1100
SinI GGWCC 2 cut(s) 187, 823
SmaI CCCGGG 1 cut(s) 404
SmiMI CAYNNNNRTG 1 cut(s) 611
SmlI CTYRAG 3 cut(s) 118, 170, 800
SmoI CTYRAG 3 cut(s) 118, 170, 800
Sse9I AATT 7 cut(s) 253, 449, 552, 634, 662, 997, 1296
SsiI CCGC 2 cut(s) 489, 1163
SspI AATATT 1 cut(s) 78
SspMI CTAG 2 cut(s) 705, 854
SstI GAGCTC 1 cut(s) 661
StyD4I CCNGG 4 cut(s) 401, 402, 969, 1276
StyI CCWWGG 3 cut(s) 501, 1347, 1426
TaaI ACNGT 3 cut(s) 248, 291, 545
TaqI TCGA 3 cut(s) 777, 1239, 1332
TaqII GACCGA 1 cut(s) 1055
TasI AATT 7 cut(s) 253, 449, 552, 634, 662, 997, 1296
TatI WGTACW 1 cut(s) 511
TfiI GAWTC 1 cut(s) 1128
Tru1I TTAA 6 cut(s) 171, 209, 408, 755, 1113, 1432
Tru9I TTAA 6 cut(s) 171, 209, 408, 755, 1113, 1432
TscAI CASTG 2 cut(s) 108, 339
TseFI GTSAC 3 cut(s) 1008, 1267, 1342
TseI GCWGC 4 cut(s) 260, 563, 626, 887
Tsp45I GTSAC 3 cut(s) 1008, 1267, 1342
TspDTI ATGAA 5 cut(s) 393, 601, 823, 1248, 1368
TspGWI ACGGA 1 cut(s) 1396
TspMI CCCGGG 1 cut(s) 402
TspRI CASTG 2 cut(s) 108, 339
Van91I CCANNNNNTGG 2 cut(s) 103, 338
Vha464I CTTAAG 1 cut(s) 170
VpaK11BI GGWCC 2 cut(s) 187, 823
XmaI CCCGGG 1 cut(s) 402
XspI CTAG 2 cut(s) 705, 854
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.