Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0000722

Physical Location & Seq

Genomic Coordinates Reverse (-)

9433737 .. 9435092

Gene Structure 1356 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1082000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1356 bp

ATGAAGGTCGAGATCATTTCAAGAAAAACAATTAGGCCATCCTCCCCAACTCCTCATCATCACAAAAACTTCAAGCTCTCTCTTTTGGACCAAAGACATAGTCCTAATTTGTATGGCAATATGATCTTCTTCTACTCGTCTACCAGCAACTATGATCATACTTATGGCGACTTCAATCCCCATGCATTGAAAATGTCAAGCCACCTTCAGAAGTCGTTGTCCAAAACCTTGGTTCATTTCTATCCACTTGCCGGGCGGCTCAAAGACGCTGCTACCATTGAGTGCAATGACCAAGGGGTTTATTTTGTAGAAGCTCGAATGGATTGCCACCTCTTGAATTTTCTCTCCCAACCTGATTCCACCTTATTCCAGCACTTTATTCCCACCTCCAGTGCTGAAAAGGAAGACGTTATTGTTCTGCTTGTTCAACTCACTGTCTTTAACTGTGGAGGAATTGCTATTGCAGTCTCTCTTTTACACAAGATCGCGGACGCTTCATCCTTGTGCACTTTTGTCCAAAGTTGGACGGCAGCCAGTACTGCTCTTGATCAATCAGAATTCATTGGTCATGACCAGAGATTAGGTCAAGTGCTTCCTTTGTTTATTGGATCGTCGTTGCTGCCGCCTTCAGAGATGTTGATCACACGCACCTTGGACATCCCAGACCCACATCAAAATTTCACCACTAGGCGTTTTGTGTTCAGCACCTCAAAGATGGCCAGTCTCAAGGCAAAAGCAGCTATTACTACTAACAACCCTACAAATGTGGAACTAGTATCTGCAGTTGTGGTCAAATGTGCTATTGCTGCTGCACAGTCCATATCAACATCGTCATCAAGGCCATCGGTGTTGTTCCACGCCATGAACTTGCGCAAAAGAATGGTCTCTCCACTGCCGGTCAATACTGTAGGTAATCTCGTTTGGGCGTTTCCAGTGCTTATTGAAGAAAGTGATATAAAATTACATGAGGTTGTTGTCAAGTTGAGGAAAGGCTTAACGGACTTTTGCAACGACAAGGCTAATAGGTTTAAAGGCGAAGATGGTTTTGCCGTGGTTTCCGAATATCATACAAAGGAGGTTGAATTCATCTCAAGGGGAGTTAATATTTTTCGTTGTACAAGTTTGTGCAAATTTCCAATATATGATATGGATTTTGGGTGGGGGAAACCCACTTGGGTTGCTACTTCTATGGGCTTTAAAAACTTTATAGTTTTGATTGATAGTAAACTTGGTGAAAATATTGAAGCGTGGGTAACACTGGCAGAACAAGAGATGGCTATCTTTCAAAGGGATGAGATGCTTCTTTCATTTGCTTCCTTAAACCCCAGTGCAGCTGTCCATGAAAGCCGTATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006807 GO:0008150 GO:0008152 GO:0009820 GO:0016740 GO:0016746 GO:0016747 GO:0050636 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110

Pfam Domains

Protein Families

Transferase

Protein Analysis

452

Amino Acids

50.37

Weight (kDa)

7.68

Isoelectric Point (pI)

41.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transferase	PF02458	1 - 432	4.2e-78	Transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000722)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g27601 FvH4_4g17130
malus_domestica	MD07G1048300.v1.1 MD07G1095200.v1.1 MD07G1095500.v1.1 MD07G1095700.v1.1 MD07G1096300.v1.1 MD07G1096400.v1.1 MD09G1062300.v1.1 MD14G1082000.v1.1
prunus_persica	Prupe.7G029300_v2.0.a1 Prupe.7G030000_v2.0.a1
pyrus_communis	pycom07g07870 pycom07g07910 pycom07g07950 pycom111g05260 pycom14g07130 pycom17g05610
rosa_chinensis	RchiOBHm_Chr1g0325581 RchiOBHm_Chr3g0487911 RchiOBHm_Chr3g0487931 RchiOBHm_Chr3g0487961 RchiOBHm_Chr3g0487971 RchiOBHm_Chr7g0216431 RchiOBHm_Chr7g0216441
rosa_laevigata	RLG00000002570 RLG00000003149 RLG00000022955 RLG00000022960 RLG00000022961 RLG00000022964 RLG00000022965 RLG00000022966 RLG00000030119 RLG00000030129
rosa_multiflora	Rmu_sc0004155.1_g000011 Rmu_sc0004448.1_g000015 Rmu_sc0004448.1_g000025 Rmu_sc0004448.1_g000031 Rmu_sc0006722.1_g000006
rosa_roxburghii	Rroxscaffold_3G00243230 Rroxscaffold_3G00243240 Rroxscaffold_3G00250720 Rroxscaffold_3G00252280 Rroxscaffold_4G00324640 Rroxscaffold_6G00394390 Rroxscaffold_6G00394400 Rroxscaffold_6G00394430 Rroxscaffold_6G00394440
rosa_rugosa	Rorug01G0053000 Rorug03G0237300 Rorug03G0237400 Rorug07G0160300 Rorug07G0160300 Rorug07G0160300
rosa_samantha	Rh1BG056200 Rh1DG073800 Rh3AG285000 Rh3AG285200 Rh3AG285400 Rh3CG320500 Rh3CG320800 Rh3DG318900 Rh3DG319000 Rh7AG299400 Rh7AG299500 Rh7BG290900 Rh7DG300800
rosa_wichuraiana	Rw0G004660 Rw0G004670 Rw1G005690 Rw3G025280 Rw7G025450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	872
AccI	GTMKAC	1 cut(s)	140
AccII	CGCG	1 cut(s)	488
AciI	CCGC	3 cut(s)	256, 488, 623
AclWI	GGATC	1 cut(s)	616
AcoI	YGGCCR	1 cut(s)	717
AcsI	RAATTY	5 cut(s)	337, 557, 676, 1082, 1130
AcuI	CTGAAG	2 cut(s)	191, 612
AfaI	GTAC	2 cut(s)	538, 1117
AfiI	CCNNNNNNNGG	1 cut(s)	251
AhlI	ACTAGT	1 cut(s)	772
AluBI	AGCT	4 cut(s)	76, 314, 740, 1334
AluI	AGCT	4 cut(s)	76, 314, 740, 1334
Alw21I	GWGCWC	1 cut(s)	509
Alw26I	GTCTC	3 cut(s)	472, 728, 889
Alw44I	GTGCAC	1 cut(s)	505
AlwI	GGATC	1 cut(s)	616
AoxI	GGCC	3 cut(s)	35, 717, 839
ApaLI	GTGCAC	1 cut(s)	505
ApeKI	GCWGC	7 cut(s)	269, 530, 619, 737, 806, 809, 1331
ApoI	RAATTY	5 cut(s)	337, 557, 676, 1082, 1130
ArsI	GACNNNNNNTTYG	4 cut(s)	85, 117, 867, 899
AspLEI	GCGC	1 cut(s)	873
AspS9I	GGNCC	1 cut(s)	88
AsuC2I	CCSGG	1 cut(s)	253
AsuHPI	GGTGA	2 cut(s)	673, 1244
AvaII	GGWCC	1 cut(s)	88
BaeGI	GKGCMC	1 cut(s)	509
BalI	TGGCCA	1 cut(s)	719
BbsI	GAAGAC	1 cut(s)	411
Bbv12I	GWGCWC	1 cut(s)	509
BbvI	GCAGC	7 cut(s)	256, 542, 606, 749, 793, 796, 1343
BccI	CCATC	5 cut(s)	46, 709, 850, 1034, 1267
BceAI	ACGGC	3 cut(s)	543, 1034, 1332
BcgI	CGANNNNNNTGC	2 cut(s)	306, 340
BclI	TGATCA	3 cut(s)	154, 547, 639
BcnI	CCSGG	1 cut(s)	253
BcoDI	GTCTC	3 cut(s)	472, 728, 889
BcuI	ACTAGT	1 cut(s)	772
BfaI	CTAG	2 cut(s)	687, 773
BfmI	CTRYAG	2 cut(s)	780, 906
BisI	GCNGC	9 cut(s)	257, 270, 531, 620, 623, 738, 807, 810, 1332
BlsI	GCNGC	9 cut(s)	258, 271, 532, 621, 624, 739, 808, 811, 1333
BmcAI	AGTACT	1 cut(s)	538
Bme1390I	CCNGG	1 cut(s)	253
Bme18I	GGWCC	1 cut(s)	88
BmgT120I	GGNCC	1 cut(s)	88
BmrFI	CCNGG	1 cut(s)	253
BmrI	ACTGGG	1 cut(s)	1320
BmsI	GCATC	1 cut(s)	1287
BmuI	ACTGGG	1 cut(s)	1320
BpiI	GAAGAC	1 cut(s)	411
BpmI	CTGGAG	1 cut(s)	373
BpuEI	CTTGAG	2 cut(s)	710, 1075
BpuMI	CCSGG	1 cut(s)	253
BsaBI	GATNNNNATC	2 cut(s)	638, 1277
BsaI	GGTCTC	1 cut(s)	889
BsaJI	CCNNGG	4 cut(s)	228, 292, 651, 1050
Bsc4I	CCNNNNNNNGG	1 cut(s)	251
Bse118I	RCCGGY	1 cut(s)	895
Bse1I	ACTGG	6 cut(s)	390, 534, 720, 932, 1263, 1326
Bse3DI	GCAATG	1 cut(s)	292
Bse8I	GATNNNNATC	2 cut(s)	638, 1277
BseDI	CCNNGG	4 cut(s)	228, 292, 651, 1050
BseGI	GGATG	4 cut(s)	38, 497, 657, 1297
BseJI	GATNNNNATC	2 cut(s)	638, 1277
BseLI	CCNNNNNNNGG	1 cut(s)	251
BseMI	GCAATG	1 cut(s)	292
BseNI	ACTGG	6 cut(s)	390, 534, 720, 932, 1263, 1326
BseRI	GAGGAG	1 cut(s)	42
BseSI	GKGCMC	1 cut(s)	509
BseXI	GCAGC	7 cut(s)	256, 542, 606, 749, 793, 796, 1343
BsgI	GTGCAG	2 cut(s)	795, 1350
Bsh1236I	CGCG	1 cut(s)	488
BshFI	GGCC	3 cut(s)	37, 719, 841
BsiHKAI	GWGCWC	1 cut(s)	509
BsiSI	CCGG	2 cut(s)	252, 896
BslI	CCNNNNNNNGG	1 cut(s)	251
BsmAI	GTCTC	3 cut(s)	472, 728, 889
BsnI	GGCC	3 cut(s)	37, 719, 841
Bso31I	GGTCTC	1 cut(s)	889
Bsp1286I	GDGCHC	1 cut(s)	509
Bsp1407I	TGTACA	1 cut(s)	1115
Bsp143I	GATC	7 cut(s)	12, 123, 154, 483, 547, 608, 639
BspACI	CCGC	3 cut(s)	256, 488, 623
BspANI	GGCC	3 cut(s)	37, 719, 841
BspFNI	CGCG	1 cut(s)	488
BspHI	TCATGA	1 cut(s)	568
BspMAI	CTGCAG	1 cut(s)	784
BspPI	GGATC	1 cut(s)	616
BspTNI	GGTCTC	1 cut(s)	889
BsrDI	GCAATG	1 cut(s)	292
BsrFI	RCCGGY	1 cut(s)	895
BsrGI	TGTACA	1 cut(s)	1115
BsrI	ACTGG	6 cut(s)	390, 534, 720, 932, 1263, 1326
BssAI	RCCGGY	1 cut(s)	895
BssECI	CCNNGG	4 cut(s)	228, 292, 651, 1050
BssMI	GATC	7 cut(s)	12, 123, 154, 483, 547, 608, 639
BssT1I	CCWWGG	3 cut(s)	228, 292, 651
Bst4CI	ACNGT	4 cut(s)	436, 446, 816, 907
BstAUI	TGTACA	1 cut(s)	1115
BstDSI	CCRYGG	1 cut(s)	1050
BstF5I	GGATG	4 cut(s)	38, 497, 657, 1297
BstFNI	CGCG	1 cut(s)	488
BstHHI	GCGC	1 cut(s)	873
BstKTI	GATC	7 cut(s)	15, 126, 157, 486, 550, 611, 642
BstMAI	GTCTC	3 cut(s)	472, 728, 889
BstMBI	GATC	7 cut(s)	12, 123, 154, 483, 547, 608, 639
BstMWI	GCNNNNNNNGC	3 cut(s)	539, 737, 806
BstSCI	CCNGG	1 cut(s)	251
BstSFI	CTRYAG	2 cut(s)	780, 906
BstSLI	GKGCMC	1 cut(s)	509
BstUI	CGCG	1 cut(s)	488
BstV1I	GCAGC	7 cut(s)	256, 542, 606, 749, 793, 796, 1343
BstV2I	GAAGAC	1 cut(s)	411
BstXI	CCANNNNNNTGG	1 cut(s)	229
BsuRI	GGCC	3 cut(s)	37, 719, 841
BtgI	CCRYGG	1 cut(s)	1050
BtsCI	GGATG	4 cut(s)	38, 497, 657, 1297
BtsI	GCAGTG	1 cut(s)	890
BtsIMutI	CAGTG	6 cut(s)	397, 432, 890, 939, 1256, 1333
CciI	TCATGA	1 cut(s)	568
CfoI	GCGC	1 cut(s)	873
Cfr10I	RCCGGY	1 cut(s)	895
Cfr13I	GGNCC	1 cut(s)	88
CseI	GACGC	2 cut(s)	275, 500
Csp6I	GTAC	2 cut(s)	537, 1116
CspCI	CAANNNNNGTGG	2 cut(s)	1159, 1194
CviAII	CATG	5 cut(s)	182, 569, 862, 965, 1340
CviQI	GTAC	2 cut(s)	537, 1116
DpnI	GATC	7 cut(s)	14, 125, 156, 485, 549, 610, 641
DpnII	GATC	7 cut(s)	12, 123, 154, 483, 547, 608, 639
DraI	TTTAAA	2 cut(s)	1030, 1198
EaeI	YGGCCR	1 cut(s)	717
Eco130I	CCWWGG	3 cut(s)	228, 292, 651
Eco31I	GGTCTC	1 cut(s)	889
Eco47I	GGWCC	1 cut(s)	88
Eco57I	CTGAAG	2 cut(s)	191, 612
EcoRI	GAATTC	2 cut(s)	557, 1082
EcoT14I	CCWWGG	3 cut(s)	228, 292, 651
EcoT22I	ATGCAT	1 cut(s)	187
ErhI	CCWWGG	3 cut(s)	228, 292, 651
FaeI	CATG	5 cut(s)	185, 572, 865, 968, 1343
FatI	CATG	5 cut(s)	181, 568, 861, 964, 1339
FbaI	TGATCA	3 cut(s)	154, 547, 639
FblI	GTMKAC	1 cut(s)	140
Fnu4HI	GCNGC	9 cut(s)	257, 270, 531, 620, 623, 738, 807, 810, 1332
FokI	GGATG	4 cut(s)	25, 484, 644, 1304
Fsp4HI	GCNGC	9 cut(s)	257, 270, 531, 620, 623, 738, 807, 810, 1332
FspBI	CTAG	2 cut(s)	687, 773
FspI	TGCGCA	1 cut(s)	872
GlaI	GCGC	1 cut(s)	872
GluI	GCNGC	9 cut(s)	257, 270, 531, 620, 623, 738, 807, 810, 1332
GsuI	CTGGAG	1 cut(s)	373
HaeIII	GGCC	3 cut(s)	37, 719, 841
HapII	CCGG	2 cut(s)	252, 896
HgaI	GACGC	2 cut(s)	275, 500
HhaI	GCGC	1 cut(s)	873
Hin1II	CATG	5 cut(s)	185, 572, 865, 968, 1343
Hin6I	GCGC	1 cut(s)	871
HinP1I	GCGC	1 cut(s)	871
HinfI	GANTC	1 cut(s)	356
HpaII	CCGG	2 cut(s)	252, 896
HphI	GGTGA	2 cut(s)	673, 1244
Hpy166II	GTNNAC	3 cut(s)	141, 507, 1226
Hpy188I	TCNGA	4 cut(s)	210, 556, 631, 1060
Hpy188III	TCNNGA	5 cut(s)	10, 21, 334, 545, 569
Hpy8I	GTNNAC	3 cut(s)	141, 507, 1226
Hpy99I	CGWCG	1 cut(s)	616
HpyAV	CCTTC	2 cut(s)	215, 636
HpyCH4III	ACNGT	4 cut(s)	436, 446, 816, 907
HpyCH4IV	ACGT	1 cut(s)	408
HpyCH4V	TGCA	9 cut(s)	185, 285, 464, 507, 782, 812, 1008, 1128, 1331
HpyF10VI	GCNNNNNNNGC	3 cut(s)	539, 737, 806
HpySE526I	ACGT	1 cut(s)	408
Hsp92II	CATG	5 cut(s)	185, 572, 865, 968, 1343
HspAI	GCGC	1 cut(s)	871
Ksp22I	TGATCA	3 cut(s)	154, 547, 639
Kzo9I	GATC	7 cut(s)	12, 123, 154, 483, 547, 608, 639
Lsp1109I	GCAGC	7 cut(s)	256, 542, 606, 749, 793, 796, 1343
LweI	GCATC	1 cut(s)	1287
MaeI	CTAG	2 cut(s)	687, 773
MaeII	ACGT	1 cut(s)	408
MaeIII	GTNAC	1 cut(s)	1252
MalI	GATC	7 cut(s)	14, 125, 156, 485, 549, 610, 641
MboI	GATC	7 cut(s)	12, 123, 154, 483, 547, 608, 639
MboII	GAAGA	5 cut(s)	118, 121, 416, 956, 1049
MhlI	GDGCHC	1 cut(s)	509
MlsI	TGGCCA	1 cut(s)	719
MluCI	AATT	9 cut(s)	30, 106, 337, 453, 557, 676, 959, 1082, 1130
MluNI	TGGCCA	1 cut(s)	719
MmeI	TCCRAC	1 cut(s)	503
MnlI	CCTC	9 cut(s)	52, 63, 341, 397, 443, 718, 961, 978, 1069
Mox20I	TGGCCA	1 cut(s)	719
Mph1103I	ATGCAT	1 cut(s)	187
MscI	TGGCCA	1 cut(s)	719
MseI	TTAA	6 cut(s)	441, 995, 1029, 1101, 1197, 1319
MslI	CAYNNNNRTG	2 cut(s)	162, 502
Msp20I	TGGCCA	1 cut(s)	719
MspA1I	CMGCKG	1 cut(s)	1334
MspI	CCGG	2 cut(s)	252, 896
MspR9I	CCNGG	1 cut(s)	253
MvnI	CGCG	1 cut(s)	488
MwoI	GCNNNNNNNGC	3 cut(s)	539, 737, 806
NciI	CCSGG	1 cut(s)	253
NdeII	GATC	7 cut(s)	12, 123, 154, 483, 547, 608, 639
NlaIII	CATG	5 cut(s)	185, 572, 865, 968, 1343
NsbI	TGCGCA	1 cut(s)	872
NsiI	ATGCAT	1 cut(s)	187
PagI	TCATGA	1 cut(s)	568
PfeI	GAWTC	1 cut(s)	356
PflFI	GACNNNGTC	1 cut(s)	99
PkrI	GCNGC	9 cut(s)	258, 271, 532, 621, 624, 739, 808, 811, 1333
PspPI	GGNCC	1 cut(s)	88
PstI	CTGCAG	1 cut(s)	784
PsyI	GACNNNGTC	1 cut(s)	99
PvuII	CAGCTG	1 cut(s)	1334
RsaI	GTAC	2 cut(s)	538, 1117
RsaNI	GTAC	2 cut(s)	537, 1116
RseI	CAYNNNNRTG	2 cut(s)	162, 502
SaqAI	TTAA	6 cut(s)	441, 995, 1029, 1101, 1197, 1319
SatI	GCNGC	9 cut(s)	257, 270, 531, 620, 623, 738, 807, 810, 1332
Sau3AI	GATC	7 cut(s)	12, 123, 154, 483, 547, 608, 639
Sau96I	GGNCC	1 cut(s)	88
ScaI	AGTACT	1 cut(s)	538
ScrFI	CCNGG	1 cut(s)	253
SduI	GDGCHC	1 cut(s)	509
SfaNI	GCATC	1 cut(s)	1287
SfcI	CTRYAG	2 cut(s)	780, 906
SinI	GGWCC	1 cut(s)	88
SmiMI	CAYNNNNRTG	2 cut(s)	162, 502
SmlI	CTYRAG	2 cut(s)	725, 1090
SmoI	CTYRAG	2 cut(s)	725, 1090
SpeI	ACTAGT	1 cut(s)	772
Sse9I	AATT	9 cut(s)	30, 106, 337, 453, 557, 676, 959, 1082, 1130
SsiI	CCGC	3 cut(s)	256, 488, 623
SspI	AATATT	2 cut(s)	1105, 1240
SspMI	CTAG	2 cut(s)	687, 773
StyD4I	CCNGG	1 cut(s)	251
StyI	CCWWGG	3 cut(s)	228, 292, 651
TaaI	ACNGT	4 cut(s)	436, 446, 816, 907
TaiI	ACGT	1 cut(s)	411
TaqI	TCGA	2 cut(s)	9, 316
TasI	AATT	9 cut(s)	30, 106, 337, 453, 557, 676, 959, 1082, 1130
TatI	WGTACW	2 cut(s)	536, 1115
TauI	GCSGC	2 cut(s)	259, 625
TfiI	GAWTC	1 cut(s)	356
Tru1I	TTAA	6 cut(s)	441, 995, 1029, 1101, 1197, 1319
Tru9I	TTAA	6 cut(s)	441, 995, 1029, 1101, 1197, 1319
TscAI	CASTG	6 cut(s)	397, 439, 897, 939, 1263, 1333
TseI	GCWGC	7 cut(s)	269, 530, 619, 737, 806, 809, 1331
TspDTI	ATGAA	8 cut(s)	17, 224, 486, 550, 878, 1075, 1296, 1356
TspGWI	ACGGA	1 cut(s)	1013
TspRI	CASTG	6 cut(s)	397, 439, 897, 939, 1263, 1333
Tth111I	GACNNNGTC	1 cut(s)	99
VneI	GTGCAC	1 cut(s)	505
VpaK11BI	GGWCC	1 cut(s)	88
XapI	RAATTY	5 cut(s)	337, 557, 676, 1082, 1130
XmiI	GTMKAC	1 cut(s)	140
XspI	CTAG	2 cut(s)	687, 773
ZrmI	AGTACT	1 cut(s)	538
Zsp2I	ATGCAT	1 cut(s)	187

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.