FvH4_3g03690

Domain of unknown function (DUF4220)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000662
Physical Location & Seq
Forward (+)
2063791 .. 2067097
3307 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g03690.t1

Sequence Viewer

Length: 2211 bp
ATGGTTTCTCCCATTCCTATCAATGTCAAGAAGATATGGGAAAAGTGGAATCTCCGGGGCTTTGTACTCCTCAGCCTCTCATTGCAAACTGCTCTAATTCTTGGTGCACCCTTCCGAAAGCGATCTCCTAACTTATTTGTAACCTTTGTTATCTGGTCATCTTACTTGCTTGCTGACTGGGCAGCTAACTTTGCGATTGGCTTAATTGCAAACAGTCAGGGTGACAATCCTTTTGTTCGAGCCCCCAACAACAATGGTGATTTTAACAGTGATCTTCTGGCATTTTGGGCACCATTTCTTCTGTTACACCTTGGTGGTCCAGACACCATAACAGCATTTGCTCTTGAGGATAACACATTGTGGCTAAGGCACTTGTTTGGGCTTGTGTTCCAGGTTATAGCTGCATTTTATGTTTTCATCCAATCATTTCCCAAAAACAAGCTGTGGCTGCCGACGGTTCTCCTATTTGTAGCAGGAATCATCAAGTATGCCGAGCGCACACGTGCTTTGTACAAAGCAAGCTTGGATAATTTCAAGGAGTCCATGCTTAAGAAACCAGACCCTGGACCCAACTATGCAAAGCTGATGGAGGAATACTCTTCCAAAAAAGATGCCAAACTTCCAACTCATATAGAGTTGACAGCAGAGCGCAGCAAAGAATCCAGGACTACTACTTATGTGGTGGACGTTGGAGATATGGAAAATAATATTGCACTGGTGCGCCATGCCTTTCACTTCTTCAACATCTTCAAGGGTCTTATCGTGGATCTCATTTTCAGCTTTCATGAGCGTTTTGAGAGCCGTGAGTTTTTCCATGACAGAAATGCAGAGGACGCTTTCAAATTGGTTGCAATTGAGCTCAATTTCATGTATGAAGCTCTATTCACCAAGGTGGTGGTTGTGCATTCTAAGTGGGGATACATATGCCGAGCTATATCCTTCAGTGCAGTTTGCACAGCTCTTGTTTGCTTCCAAAAAATAGAGAAACATGATTTCCATGGCTTTGATGTTGGAATTACCTATACTTTACTTTTCGGTGCCTTGGCCTTGGATTCAATAGCAGTGTTCATGCTTATATTCTCCGACTGGACTGTTGCTGCTGTGCGCAAGTCTTGCCAAAATTCTTGCCTAGCCAATATGCTCAAAAGGTACATAACTCTCAAGCAATCTAGGTGGTTCGTTACAGAAAATGCAAATCCATGTTTGGAGTGGTGTAGGCAACTTCTATTTCGAAGGTGGTATGAGTCTGTCTCTATATTTAACTTGATACATTATTCCCTCAAGGAATGTCCAAAACTGAGTCCTAATATTTTTGATTACATTTTCAAGGCCTACATCAATGTCATATACTTGCTTGGTCTTAAGGATCTTCGAGATAAGATCAAATATAGGACCAGCAAGCCACTCGAAAAAGAGCTATGGAAATTCATTTTTGCTCAGTTGAAAAGTAAGTCCATGCTCGCAGATGATCCTGAAACTGCCAGGAGAATAAGTTCGGCCAGAGGTGACTGGATTCTACAGGATAGTGAGTGGAATAATTCTGAGGATTGCCGTAAGTTGCTCTCTTATGTTGTTGATGTTGAATATGATCAGAGCATTCTACTGTGGCACATTGCTACTGAGTTTTGTTATAATCTTGACAGTAATGATCCAAAATACAAGGTTCTTATTGACAGTACTGATCCAAAAGACAAGGCTGTTCTCACTAAAATTGAACACTGCAAGACCTTGTCTGATTACATGGTATACCTCTTAGTTATGCAGCCTACTATGATGTCATCTGTAGCAGGAATTGGACAAATAAGATTCCGCGATACGTGTGCAGAAGCCATAAAGTTCTTCAGCAGAAGGGAACTAGGACCAGAAGTGAATCAAAAAGACGCATGTGATAGAATTCTTGAGGTAAATACAGATGTTCAGCCAGTTGATGTCAAAGGGGATCGAAGTAAATCCGTGTTGTTTGATGCATGTATTCTAGCAAAACAACTAAAAAGTATGGACAAAAAGAAATGGGATCTGATGTGTGAAGTGTGGGTGGAACTACTAGCATATGCAGCAGGTCATTGCCGAGCAAATGACCATGCCCAACTGCTAAGCAAAGGGGGAGAGCTTGTCACTTTTGTTTGGTTAGTGATGGCTCATTTTGGCATAGGGGAGCAGTTCCAGATAAATGAGGGGCACGCAAGAGCAAAACTCATTGTGGGAAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4220 DUF594

Protein Analysis

737

Amino Acids

84.68

Weight (kDa)

8.48

Isoelectric Point (pI)

39.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4220 PF13968 52 - 425 6.7e-106 Domain of unknown function (DUF4220)
DUF594 PF04578 667 - 717 6.9e-22 Protein of unknown function, DUF594
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1632
Acc16I TGCGCA 1 cut(s) 1106
Acc36I ACCTGC 1 cut(s) 2048
AccB1I GGYRCC 2 cut(s) 289, 1037
AccB7I CCANNNNNTGG 1 cut(s) 563
AccI GTMKAC 1 cut(s) 1746
AccII CGCG 1 cut(s) 1812
AciI CCGC 1 cut(s) 1810
AclWI GGATC 7 cut(s) 774, 1374, 1463, 1643, 1676, 1947, 2022
AcoI YGGCCR 1 cut(s) 1497
AcsI RAATTY 3 cut(s) 1120, 1424, 1893
AcuI CTGAAG 2 cut(s) 925, 1825
AcvI CACGTG 1 cut(s) 503
AdeI CACNNNGTG 1 cut(s) 360
AfaI GTAC 4 cut(s) 66, 512, 1151, 1678
AfiI CCNNNNNNNGG 1 cut(s) 563
AflII CTTAAG 2 cut(s) 548, 1361
AflIII ACRYGT 2 cut(s) 500, 1817
AgsI TTSAA 9 cut(s) 535, 742, 751, 841, 1056, 1327, 1444, 1583, 1715
AjnI CCWGG 4 cut(s) 390, 562, 662, 1481
AleI CACNNNNGTG 2 cut(s) 312, 890
AloI GAACNNNNNNTCC 2 cut(s) 1477, 1509
Alw21I GWGCWC 2 cut(s) 109, 861
Alw26I GTCTC 1 cut(s) 1255
Alw44I GTGCAC 1 cut(s) 105
AlwI GGATC 7 cut(s) 774, 1374, 1463, 1643, 1676, 1947, 2022
AlwNI CAGNNNCTG 1 cut(s) 563
AoxI GGCC 3 cut(s) 1044, 1329, 1497
ApaLI GTGCAC 1 cut(s) 105
ApeKI GCWGC 7 cut(s) 182, 401, 448, 651, 1097, 1762, 2054
ApoI RAATTY 3 cut(s) 1120, 1424, 1893
ArsI GACNNNNNNTTYG 2 cut(s) 215, 247
Asp700I GAANNNNTTC 1 cut(s) 1492
AspLEI GCGC 4 cut(s) 498, 651, 723, 1107
AspS9I GGNCC 4 cut(s) 317, 566, 1392, 1859
AsuC2I CCSGG 1 cut(s) 56
AsuHPI GGTGA 4 cut(s) 233, 269, 877, 1517
AsuII TTCGAA 1 cut(s) 1231
AvaII GGWCC 4 cut(s) 317, 566, 1392, 1859
BaeGI GKGCMC 3 cut(s) 109, 292, 2181
BanI GGYRCC 2 cut(s) 289, 1037
BanII GRGCYC 2 cut(s) 244, 861
BbrPI CACGTG 1 cut(s) 503
Bbv12I GWGCWC 2 cut(s) 109, 861
BbvCI CCTCAGC 1 cut(s) 71
BbvI GCAGC 7 cut(s) 194, 388, 435, 663, 1084, 1774, 2066
BccI CCATC 2 cut(s) 580, 2128
BceAI ACGGC 2 cut(s) 786, 1536
BcgI CGANNNNNNTGC 4 cut(s) 1387, 1421, 1802, 1836
BciT130I CCWGG 4 cut(s) 392, 564, 664, 1483
BciVI GTATCC 1 cut(s) 911
BclI TGATCA 1 cut(s) 1588
BcnI CCSGG 1 cut(s) 56
BcoDI GTCTC 1 cut(s) 1255
BfaI CTAG 5 cut(s) 1130, 1170, 1856, 1976, 2045
BfmI CTRYAG 2 cut(s) 1517, 1782
BfrI CTTAAG 2 cut(s) 548, 1361
BfuAI ACCTGC 1 cut(s) 2048
BfuI GTATCC 1 cut(s) 911
BisI GCNGC 7 cut(s) 183, 402, 449, 652, 1098, 1763, 2055
BlpI GCTNAGC 1 cut(s) 2093
BlsI GCNGC 7 cut(s) 184, 403, 450, 653, 1099, 1764, 2056
BmcAI AGTACT 1 cut(s) 1678
Bme1390I CCNGG 5 cut(s) 56, 392, 564, 664, 1483
Bme18I GGWCC 4 cut(s) 317, 566, 1392, 1859
BmgT120I GGNCC 4 cut(s) 317, 566, 1392, 1859
BmiI GGNNCC 3 cut(s) 291, 568, 1039
BmrFI CCNGG 5 cut(s) 56, 392, 564, 664, 1483
BmrI ACTGGG 1 cut(s) 187
BmsI GCATC 2 cut(s) 601, 1954
BmuI ACTGGG 1 cut(s) 187
BplI GAGNNNNNCTC 6 cut(s) 581, 613, 1235, 1267, 2178, 2210
Bpu10I CCTNAGC 2 cut(s) 71, 365
Bpu1102I GCTNAGC 1 cut(s) 2093
Bpu14I TTCGAA 1 cut(s) 1231
BpuEI CTTGAG 4 cut(s) 365, 1145, 1265, 1919
BpuMI CCSGG 1 cut(s) 56
BsaAI YACGTR 2 cut(s) 503, 1818
BsaJI CCNNGG 7 cut(s) 55, 310, 562, 888, 997, 1041, 1047
BsaXI ACNNNNNCTCC 4 cut(s) 1477, 1507, 2097, 2127
Bsc4I CCNNNNNNNGG 1 cut(s) 563
Bse1I ACTGG 5 cut(s) 182, 720, 1091, 1514, 1922
Bse3DI GCAATG 3 cut(s) 80, 1611, 2062
BseBI CCWGG 4 cut(s) 392, 564, 664, 1483
BseDI CCNNGG 7 cut(s) 55, 310, 562, 888, 997, 1041, 1047
BseGI GGATG 1 cut(s) 417
BseLI CCNNNNNNNGG 1 cut(s) 563
BseMI GCAATG 3 cut(s) 80, 1611, 2062
BseMII CTCAG 5 cut(s) 85, 1289, 1451, 1533, 1611
BseNI ACTGG 5 cut(s) 182, 720, 1091, 1514, 1922
BseRI GAGGAG 1 cut(s) 59
BseSI GKGCMC 3 cut(s) 109, 292, 2181
BseXI GCAGC 7 cut(s) 194, 388, 435, 663, 1084, 1774, 2066
BsgI GTGCAG 2 cut(s) 966, 1842
Bsh1236I CGCG 1 cut(s) 1812
BshFI GGCC 3 cut(s) 1046, 1331, 1499
BshNI GGYRCC 2 cut(s) 289, 1037
BsiHKAI GWGCWC 2 cut(s) 109, 861
BsiSI CCGG 1 cut(s) 55
BslI CCNNNNNNNGG 1 cut(s) 563
BsmAI GTCTC 1 cut(s) 1255
BsmI GAATGC 2 cut(s) 904, 1596
BsnI GGCC 3 cut(s) 1046, 1331, 1499
Bsp119I TTCGAA 1 cut(s) 1231
Bsp1286I GDGCHC 5 cut(s) 109, 244, 292, 861, 2181
Bsp1407I TGTACA 1 cut(s) 510
Bsp1720I GCTNAGC 1 cut(s) 2093
Bsp19I CCATGG 1 cut(s) 997
BspACI CCGC 1 cut(s) 1810
BspANI GGCC 3 cut(s) 1046, 1331, 1499
BspCNI CTCAG 5 cut(s) 84, 1290, 1450, 1534, 1612
BspFNI CGCG 1 cut(s) 1812
BspHI TCATGA 1 cut(s) 784
BspLI GGNNCC 3 cut(s) 291, 568, 1039
BspMI ACCTGC 1 cut(s) 2048
BspPI GGATC 7 cut(s) 774, 1374, 1463, 1643, 1676, 1947, 2022
BspT104I TTCGAA 1 cut(s) 1231
BspT107I GGYRCC 2 cut(s) 289, 1037
BspTI CTTAAG 2 cut(s) 548, 1361
BsrDI GCAATG 3 cut(s) 80, 1611, 2062
BsrGI TGTACA 1 cut(s) 510
BsrI ACTGG 5 cut(s) 182, 720, 1091, 1514, 1922
BssECI CCNNGG 7 cut(s) 55, 310, 562, 888, 997, 1041, 1047
BssNAI GTATAC 1 cut(s) 1747
BssT1I CCWWGG 5 cut(s) 310, 888, 997, 1041, 1047
Bst1107I GTATAC 1 cut(s) 1747
Bst2UI CCWGG 4 cut(s) 392, 564, 664, 1483
Bst4CI ACNGT 7 cut(s) 215, 269, 457, 1093, 1605, 1643, 1676
Bst6I CTCTTC 1 cut(s) 604
BstAFI CTTAAG 2 cut(s) 548, 1361
BstAPI GCANNNNNTGC 1 cut(s) 1113
BstAUI TGTACA 1 cut(s) 510
BstBAI YACGTR 2 cut(s) 503, 1818
BstBI TTCGAA 1 cut(s) 1231
BstC8I GCNNGC 5 cut(s) 171, 520, 1400, 1461, 2181
BstDEI CTNAG 9 cut(s) 71, 365, 909, 1298, 1437, 1542, 1620, 1753, 2093
BstDSI CCRYGG 1 cut(s) 997
BstF5I GGATG 1 cut(s) 417
BstFNI CGCG 1 cut(s) 1812
BstHHI GCGC 4 cut(s) 498, 651, 723, 1107
BstMAI GTCTC 1 cut(s) 1255
BstMWI GCNNNNNNNGC 7 cut(s) 179, 191, 287, 448, 833, 1113, 2054
BstNI CCWGG 4 cut(s) 392, 564, 664, 1483
BstNSI RCATGY 2 cut(s) 1887, 1971
BstSCI CCNGG 5 cut(s) 54, 390, 562, 662, 1481
BstSFI CTRYAG 2 cut(s) 1517, 1782
BstSLI GKGCMC 3 cut(s) 109, 292, 2181
BstUI CGCG 1 cut(s) 1812
BstV1I GCAGC 7 cut(s) 194, 388, 435, 663, 1084, 1774, 2066
BstX2I RGATCY 3 cut(s) 766, 1366, 2014
BstXI CCANNNNNNTGG 1 cut(s) 895
BstYI RGATCY 3 cut(s) 766, 1366, 2014
BstZ17I GTATAC 1 cut(s) 1747
BsuI GTATCC 1 cut(s) 911
BsuRI GGCC 3 cut(s) 1046, 1331, 1499
BtgI CCRYGG 1 cut(s) 997
BtsCI GGATG 1 cut(s) 417
BtsI GCAGTG 2 cut(s) 1068, 1717
BtsIMutI CAGTG 5 cut(s) 274, 713, 949, 1068, 1717
BveI ACCTGC 1 cut(s) 2048
Cac8I GCNNGC 5 cut(s) 171, 520, 1400, 1461, 2181
CaiI CAGNNNCTG 1 cut(s) 563
CciI TCATGA 1 cut(s) 784
CfoI GCGC 4 cut(s) 498, 651, 723, 1107
Cfr13I GGNCC 4 cut(s) 317, 566, 1392, 1859
CseI GACGC 2 cut(s) 842, 1889
Csp6I GTAC 4 cut(s) 65, 511, 1150, 1677
CspCI CAANNNNNGTGG 2 cut(s) 1154, 1189
CviQI GTAC 4 cut(s) 65, 511, 1150, 1677
DdeI CTNAG 9 cut(s) 71, 365, 909, 1298, 1437, 1542, 1620, 1753, 2093
DraIII CACNNNGTG 1 cut(s) 360
EaeI YGGCCR 1 cut(s) 1497
Eam1104I CTCTTC 1 cut(s) 604
EarI CTCTTC 1 cut(s) 604
Ecl136II GAGCTC 1 cut(s) 859
Eco130I CCWWGG 5 cut(s) 310, 888, 997, 1041, 1047
Eco147I AGGCCT 1 cut(s) 1331
Eco24I GRGCYC 2 cut(s) 244, 861
Eco47I GGWCC 4 cut(s) 317, 566, 1392, 1859
Eco53kI GAGCTC 1 cut(s) 859
Eco57I CTGAAG 2 cut(s) 925, 1825
Eco72I CACGTG 1 cut(s) 503
EcoICRI GAGCTC 1 cut(s) 859
EcoRI GAATTC 1 cut(s) 1893
EcoRII CCWGG 4 cut(s) 390, 562, 662, 1481
EcoT14I CCWWGG 5 cut(s) 310, 888, 997, 1041, 1047
EcoT22I ATGCAT 1 cut(s) 1969
EcoT38I GRGCYC 2 cut(s) 244, 861
ErhI CCWWGG 5 cut(s) 310, 888, 997, 1041, 1047
FauNDI CATATG 2 cut(s) 923, 2050
FbaI TGATCA 1 cut(s) 1588
FblI GTMKAC 1 cut(s) 1746
Fnu4HI GCNGC 7 cut(s) 183, 402, 449, 652, 1098, 1763, 2055
FokI GGATG 1 cut(s) 404
FriOI GRGCYC 2 cut(s) 244, 861
Fsp4HI GCNGC 7 cut(s) 183, 402, 449, 652, 1098, 1763, 2055
FspBI CTAG 5 cut(s) 1130, 1170, 1856, 1976, 2045
FspI TGCGCA 1 cut(s) 1106
GlaI GCGC 4 cut(s) 497, 650, 722, 1106
GluI GCNGC 7 cut(s) 183, 402, 449, 652, 1098, 1763, 2055
HaeIII GGCC 3 cut(s) 1046, 1331, 1499
HapII CCGG 1 cut(s) 55
HgaI GACGC 2 cut(s) 842, 1889
HhaI GCGC 4 cut(s) 498, 651, 723, 1107
Hin6I GCGC 4 cut(s) 496, 649, 721, 1105
HinP1I GCGC 4 cut(s) 496, 649, 721, 1105
HincII GTYRAC 1 cut(s) 639
HindII GTYRAC 1 cut(s) 639
HindIII AAGCTT 1 cut(s) 520
HpaII CCGG 1 cut(s) 55
HphI GGTGA 4 cut(s) 233, 269, 877, 1517
Hpy166II GTNNAC 4 cut(s) 107, 639, 685, 1747
Hpy188I TCNGA 6 cut(s) 116, 1084, 1543, 1593, 1735, 2019
Hpy188III TCNNGA 9 cut(s) 28, 320, 344, 785, 1373, 1472, 1637, 1898, 2164
Hpy8I GTNNAC 4 cut(s) 107, 639, 685, 1747
Hpy99I CGWCG 1 cut(s) 457
HpyAV CCTTC 4 cut(s) 121, 949, 1227, 1842
HpyCH4III ACNGT 7 cut(s) 215, 269, 457, 1093, 1605, 1643, 1676
HpyCH4IV ACGT 3 cut(s) 502, 687, 1817
HpyF10VI GCNNNNNNNGC 7 cut(s) 179, 191, 287, 448, 833, 1113, 2054
HpyF3I CTNAG 9 cut(s) 71, 365, 909, 1298, 1437, 1542, 1620, 1753, 2093
HpySE526I ACGT 3 cut(s) 502, 687, 1817
HspAI GCGC 4 cut(s) 496, 649, 721, 1105
Ksp22I TGATCA 1 cut(s) 1588
LmnI GCTCC 1 cut(s) 2155
Lsp1109I GCAGC 7 cut(s) 194, 388, 435, 663, 1084, 1774, 2066
LweI GCATC 2 cut(s) 601, 1954
MaeI CTAG 5 cut(s) 1130, 1170, 1856, 1976, 2045
MaeII ACGT 3 cut(s) 502, 687, 1817
MaeIII GTNAC 6 cut(s) 139, 221, 303, 1180, 1505, 2113
MboII GAAGA 8 cut(s) 43, 266, 290, 591, 730, 739, 1361, 1831
MfeI CAATTG 1 cut(s) 852
MflI RGATCY 3 cut(s) 766, 1366, 2014
MhlI GDGCHC 5 cut(s) 109, 244, 292, 861, 2181
MlyI GAGTC 3 cut(s) 548, 1253, 1309
MmeI TCCRAC 4 cut(s) 647, 670, 991, 1107
Mph1103I ATGCAT 1 cut(s) 1969
MroXI GAANNNNTTC 1 cut(s) 1492
MseI TTAA 5 cut(s) 203, 264, 549, 1260, 1362
MslI CAYNNNNRTG 2 cut(s) 312, 890
MspCI CTTAAG 2 cut(s) 548, 1361
MspI CCGG 1 cut(s) 55
MspR9I CCNGG 5 cut(s) 56, 392, 564, 664, 1483
MunI CAATTG 1 cut(s) 852
Mva1269I GAATGC 2 cut(s) 904, 1596
MvaI CCWGG 4 cut(s) 392, 564, 664, 1483
MvnI CGCG 1 cut(s) 1812
MwoI GCNNNNNNNGC 7 cut(s) 179, 191, 287, 448, 833, 1113, 2054
NciI CCSGG 1 cut(s) 56
NcoI CCATGG 1 cut(s) 997
NdeI CATATG 2 cut(s) 923, 2050
NlaIV GGNNCC 3 cut(s) 291, 568, 1039
NmeAIII GCCGAG 3 cut(s) 517, 953, 2093
NmuCI GTSAC 3 cut(s) 221, 1505, 2113
NsbI TGCGCA 1 cut(s) 1106
NsiI ATGCAT 1 cut(s) 1969
NspI RCATGY 2 cut(s) 1887, 1971
NspV TTCGAA 1 cut(s) 1231
OliI CACNNNNGTG 2 cut(s) 312, 890
PagI TCATGA 1 cut(s) 784
PceI AGGCCT 1 cut(s) 1331
PctI GAATGC 2 cut(s) 904, 1596
PdmI GAANNNNTTC 1 cut(s) 1492
PfeI GAWTC 7 cut(s) 49, 477, 659, 1052, 1513, 1806, 1870
PflFI GACNNNGTC 1 cut(s) 1729
PflMI CCANNNNNTGG 1 cut(s) 563
PfoI TCCNGGA 1 cut(s) 662
PkrI GCNGC 7 cut(s) 184, 403, 450, 653, 1099, 1764, 2056
PleI GAGTC 3 cut(s) 547, 1252, 1308
PmaCI CACGTG 1 cut(s) 503
PmlI CACGTG 1 cut(s) 503
PpsI GAGTC 3 cut(s) 547, 1252, 1308
Ppu21I YACGTR 2 cut(s) 503, 1818
PsiI TTATAA 1 cut(s) 1632
Psp124BI GAGCTC 1 cut(s) 861
Psp6I CCWGG 4 cut(s) 390, 562, 662, 1481
PspCI CACGTG 1 cut(s) 503
PspGI CCWGG 4 cut(s) 390, 562, 662, 1481
PspN4I GGNNCC 3 cut(s) 291, 568, 1039
PspPI GGNCC 4 cut(s) 317, 566, 1392, 1859
PstNI CAGNNNCTG 1 cut(s) 563
PsuI RGATCY 3 cut(s) 766, 1366, 2014
PsyI GACNNNGTC 1 cut(s) 1729
RsaI GTAC 4 cut(s) 66, 512, 1151, 1678
RsaNI GTAC 4 cut(s) 65, 511, 1150, 1677
RseI CAYNNNNRTG 2 cut(s) 312, 890
SacI GAGCTC 1 cut(s) 861
SaqAI TTAA 5 cut(s) 203, 264, 549, 1260, 1362
SatI GCNGC 7 cut(s) 183, 402, 449, 652, 1098, 1763, 2055
Sau96I GGNCC 4 cut(s) 317, 566, 1392, 1859
ScaI AGTACT 1 cut(s) 1678
SchI GAGTC 3 cut(s) 548, 1253, 1309
ScrFI CCNGG 5 cut(s) 56, 392, 564, 664, 1483
SduI GDGCHC 5 cut(s) 109, 244, 292, 861, 2181
SfaNI GCATC 2 cut(s) 601, 1954
SfcI CTRYAG 2 cut(s) 1517, 1782
SfuI TTCGAA 1 cut(s) 1231
SinI GGWCC 4 cut(s) 317, 566, 1392, 1859
SmiMI CAYNNNNRTG 2 cut(s) 312, 890
SmlI CTYRAG 6 cut(s) 344, 548, 1160, 1280, 1361, 1898
SmoI CTYRAG 6 cut(s) 344, 548, 1160, 1280, 1361, 1898
SseBI AGGCCT 1 cut(s) 1331
SsiI CCGC 1 cut(s) 1810
SspI AATATT 2 cut(s) 709, 1309
SspMI CTAG 5 cut(s) 1130, 1170, 1856, 1976, 2045
SstI GAGCTC 1 cut(s) 861
StuI AGGCCT 1 cut(s) 1331
StyD4I CCNGG 5 cut(s) 54, 390, 562, 662, 1481
StyI CCWWGG 5 cut(s) 310, 888, 997, 1041, 1047
TaaI ACNGT 7 cut(s) 215, 269, 457, 1093, 1605, 1643, 1676
TaiI ACGT 3 cut(s) 505, 690, 1820
TaqI TCGA 5 cut(s) 238, 1231, 1372, 1407, 1942
TatI WGTACW 3 cut(s) 64, 510, 1676
TfiI GAWTC 7 cut(s) 49, 477, 659, 1052, 1513, 1806, 1870
Tru1I TTAA 5 cut(s) 203, 264, 549, 1260, 1362
Tru9I TTAA 5 cut(s) 203, 264, 549, 1260, 1362
TscAI CASTG 5 cut(s) 274, 720, 949, 1068, 1724
TseFI GTSAC 3 cut(s) 221, 1505, 2113
TseI GCWGC 7 cut(s) 182, 401, 448, 651, 1097, 1762, 2054
Tsp45I GTSAC 3 cut(s) 221, 1505, 2113
TspDTI ATGAA 6 cut(s) 406, 773, 856, 888, 1057, 1417
TspGWI ACGGA 1 cut(s) 1942
TspRI CASTG 5 cut(s) 274, 720, 949, 1068, 1724
Tth111I GACNNNGTC 1 cut(s) 1729
Van91I CCANNNNNTGG 1 cut(s) 563
Vha464I CTTAAG 2 cut(s) 548, 1361
VneI GTGCAC 1 cut(s) 105
VpaK11BI GGWCC 4 cut(s) 317, 566, 1392, 1859
XapI RAATTY 3 cut(s) 1120, 1424, 1893
XceI RCATGY 2 cut(s) 1887, 1971
XcmI CCANNNNNNNNNTGG 1 cut(s) 1206
XmiI GTMKAC 1 cut(s) 1746
XmnI GAANNNNTTC 1 cut(s) 1492
XspI CTAG 5 cut(s) 1130, 1170, 1856, 1976, 2045
ZrmI AGTACT 1 cut(s) 1678
Zsp2I ATGCAT 1 cut(s) 1969
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.