Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0000662

Physical Location & Seq

Genomic Coordinates Reverse (-)

25089304 .. 25098165

Gene Structure 8862 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG245200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2259 bp

ATGCCTTCATTAGCCGCTCCTATTTCTAACAAGGTCAAGAATATCTGGGATAAGTGGAATCTGCGGAGCTTCATCATATTAAGTCTCTCATTGCAGACCTTCTTAATTCTCTTTGCACCCTTGAGAAAGAGAACATCGAGCAAATGGGTAATCGTGCCTATCTGGTTAGCTTACTTGCTAGCTGACTGGGCTGCTAACTTTGCTATCGGACTAATTGCAAGCAGCCAAACGAACACTGATCAAGACTCCCCAGAGAATGGTAATCTCTTGACATTCTGGGCTCCCTTTCTTCTTTTGCACCTTGGTGGTCCAGACACCATAATTGCAATTGCTATGGAAGACAATGCGTTGTGGCCAAGGCACTTGCTTGGACTAATATTCCAGGTTGTAGCTGCAATGTACGTCTTCGGTATGCAGTTCTCTAACCAAAACAAGCTACTGTGGCCAACACTCTTGCTGTTTGTACCAGGACTTGTCAAGTACGGCGAGCGAACGCGTGCTCTATATCTTGCCAGCTTGGAAAGTCTCAAGGAAACCATACTTGCAATACCGGAACCTGGACCGGATTATGCAAAGTACATGGATGAGTACTCCTCAAGAAAAGCTGCCCATCTTCCAATTAAAATAGAAATTGAAGAAGGTCGTAGCTCAGATTCTAAGAATGTGACTTACCAGCTGGGAGAAGGAGACACTGATAATATTACACTAGTGGAGGGTGCTTATCACTTGTTTCAAATTTCCATGGGTCTTATTATAGATCTTGTGTTCGACTATCATCAGCGCAATGAGAGCCGTGCCTATTTCAATAAATTAACGTCAGAACAAGCTTTTACATCAATTGCGACTGAGCTCAATTTTATGTATGAAGCTCTGTACACCAAAGCTTATGTGGTACATTCTCGACGGGGATACTTGTTGAGGGCTACATCCTTCATCGCAGTTTGCATAGCCCTTATTTTCTTCCATAGATTAGATAAACATGGCTTTCACATGTTTGATGTCGGACTTACTTATTCCTTGCTTTTTGGTGCCATAGCTCTTGATTCAATAGCTCTTTCGATGCTGATATTATCTGATTGGACGATCGCTGTTGTATACAAGTTCTGTAAAGAGTTTTCCCTAGTCACTGGTTTCGTGATGAAGTACCTGGACTTTAAGAGATCATGGCGACCAACTACTACACCCACACCCAAGTGTCTGGAGTGGACCAGAAAAATTTTATTTCGAAGATGGTGTGAATCTGTCTCCGGTTTCAGCTTCATAGATTATTCTCTCCGAGAATGTGGAAGAGTAGTCCGACCTGGGGACCGTTTTGACCTTTTTTACCTGTACCGTAGATTCATCAGATTCTTGGGCCACCGTTACATTCAAATCATCAGATTCTTTGGCCTCAAGTATCTTCGAGATGAGATGAAGTATAGATCCAGCAAGAGACTGGCTAACAAGTTGTGGAATTTCATTTTTGAAGAGTTGCAAAAAAAATCCTTGAAAGCAGATGATGATGATGATCCCAAAATTGCTAAAACAATATGTTCATCCCAAGGGGATTGGGTTCTCCGAGAAAGGTATAAGGAGCATCCAGAGTACACTAACTTACTATCTTATGAGGAATTACAATCGTGCTTTGTTGATGTTACTTATGACCGACGCATTCTGCTGTGGCATATTGCTACTGAGATGTGTTATTACGGAGTTAATACAGGCAATGGTGGTGAGCATGGTGAATTTAGTAAGACCTTGTCTGATTACATGCTGTATCTCTTAATCATGCAGCCTGCTTTGATGTCCTCTGTAGCGGGAATCGGACAAAAGAGATTTAGAGATACGGTTGCAGAAGCCAAAAAATTCTTTAAGAAAAGGGGATTGGGATCCGATGTGAAACTAGGCAAGGAGGAACTAGGTGAGGCTTGTTGCAAACTCCTTGATGTAGATACAGGAGTTAAACCAGTCGATGTCAAAGGGAATAGAAGTAAATCTGTTTTGTTTGATGCACGTATTCTGGCCGGGCTGCTGATGAAATTCGGGGACTCGAAATGGGAATTAATAAGCGCGGTGTGGGTGGAATTGCTATCATATGCTGCAAGCCATTGCAGAGCACATAGCCACGCGCAATTGCTGACTAAAGGTGGAGAGCTTGTCACTTTTGTTTGGTTACTGATGGCTCGTTTTGGCATTGAGGAGGACATCCAAGTACTGGAGGTCCAAGCAAGAGTGAAACTGATCATGGAGAAGCAACCTGATGTATTCCAGATTAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4220 DUF594

Protein Analysis

752

Amino Acids

86.55

Weight (kDa)

8.79

Isoelectric Point (pI)

40.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF4220	PF13968	55 - 423	1.9e-90	Domain of unknown function (DUF4220)
DUF594	PF04578	676 - 725	6.1e-21	Protein of unknown function, DUF594

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000662)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19080 AT4G19090 AT5G45460 AT5G45470 AT5G45480 AT5G45530 AT5G45540
fragaria_vesca	FvH4_3g03690 FvH4_3g03690
malus_domestica	MD05G1327200.v1.1 MD17G1136800.v1.1 MD17G1216700.v1.1
prunus_persica	Prupe.4G034100_v2.0.a1
pyrus_communis	pycom05g16250 pycom05g30160 pycom17g13040
rosa_chinensis	RchiOBHm_Chr2g0111471 RchiOBHm_Chr2g0112841 RchiOBHm_Chr2g0112871 RchiOBHm_Chr2g0151851 RchiOBHm_Chr5g0005741
rosa_laevigata	RLG00000017895 RLG00000018015 RLG00000018017 RLG00000020583 RLG00000031322
rosa_multiflora	Rmu_sc0000570.1_g000032 Rmu_sc0002351.1_g000021 Rmu_sc0002351.1_g000026 Rmu_sc0002351.1_g000069 Rmu_sc0004286.1_g000001 Rmu_sc0004286.1_g000007 Rmu_sc0005791.1_g000006 Rmu_sc0024477.1_g000001
rosa_roxburghii	Rroxscaffold_1G00070110 Rroxscaffold_2G00096140 Rroxscaffold_2G00131100 Rroxscaffold_2G00131110 Rroxscaffold_2G00132290 Rroxscaffold_6G00399620
rosa_rugosa	Rorug02G0174600 Rorug02G0182900 Rorug02G0183000 Rorug02G0183100 Rorug02G0429200 Rorug04G0417700
rosa_samantha	Rh2AG227300 Rh2AG237700 Rh2AG238000 Rh2AG490000 Rh2BG239100 Rh2BG250500 Rh2BG250700 Rh2BG251300 Rh2BG502500 Rh2CG230900 Rh2CG241500 Rh2CG242000 Rh2CG476300 Rh2DG235100 Rh2DG245200 Rh2DG245500 Rh2DG513700 Rh5AG045300 Rh5BG044000 Rh5CG052800 Rh5DG043800 Rh6CG067200 Rh6DG064100
rosa_wichuraiana	Rw0G018030 Rw2G017560 Rw2G018420 Rw2G018610 Rw2G040170 Rw2G040290 Rw5G004550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1028
AccB7I	CCANNNNNTGG	2 cut(s)	257, 2194
AccBSI	CCGCTC	1 cut(s)	17
AccI	GTMKAC	1 cut(s)	1095
AccII	CGCG	3 cut(s)	496, 2051, 2108
AciI	CCGC	4 cut(s)	15, 64, 1796, 2051
AclWI	GGATC	4 cut(s)	1416, 1502, 1863, 1876
AcoI	YGGCCR	3 cut(s)	353, 443, 2001
AcsI	RAATTY	6 cut(s)	735, 1215, 1453, 1724, 1844, 2018
AfiI	CCNNNNNNNGG	4 cut(s)	257, 557, 1303, 2194
AflIII	ACRYGT	2 cut(s)	494, 990
AgsI	TTSAA	7 cut(s)	635, 734, 805, 1047, 1370, 1466, 1489
AhlI	ACTAGT	1 cut(s)	706
AjnI	CCWGG	5 cut(s)	381, 466, 556, 1146, 1300
AjuI	GAANNNNNNNTTGG	2 cut(s)	1847, 1879
AleI	CACNNNNGTG	2 cut(s)	303, 1192
Alw21I	GWGCWC	3 cut(s)	502, 852, 2098
Alw26I	GTCTC	5 cut(s)	89, 530, 681, 1249, 1426
AlwI	GGATC	4 cut(s)	1416, 1502, 1863, 1876
AoxI	GGCC	5 cut(s)	353, 443, 1354, 1387, 2001
ApeKI	GCWGC	7 cut(s)	191, 222, 392, 605, 1771, 2008, 2078
ApoI	RAATTY	6 cut(s)	735, 1215, 1453, 1724, 1844, 2018
AseI	ATTAAT	1 cut(s)	2042
AspLEI	GCGC	3 cut(s)	783, 2051, 2110
AspS9I	GGNCC	6 cut(s)	308, 560, 1206, 1306, 1354, 2200
AsuC2I	CCSGG	1 cut(s)	2005
AsuHPI	GGTGA	3 cut(s)	1724, 1733, 1913
AsuII	TTCGAA	1 cut(s)	1225
AsuNHI	GCTAGC	1 cut(s)	178
AvaII	GGWCC	5 cut(s)	308, 560, 1206, 1306, 2200
BaeI	ACNNNNGTAYC	2 cut(s)	1923, 1956
BalI	TGGCCA	2 cut(s)	355, 445
BamHI	GGATCC	1 cut(s)	1868
BanI	GGYRCC	1 cut(s)	1028
BanII	GRGCYC	2 cut(s)	283, 852
BbsI	GAAGAC	2 cut(s)	345, 397
Bbv12I	GWGCWC	3 cut(s)	502, 852, 2098
BbvI	GCAGC	7 cut(s)	178, 234, 379, 592, 1783, 1995, 2065
BccI	CCATC	3 cut(s)	618, 1224, 2152
BceAI	ACGGC	2 cut(s)	499, 777
BciT130I	CCWGG	5 cut(s)	383, 468, 558, 1148, 1302
BciVI	GTATCC	1 cut(s)	902
BclI	TGATCA	2 cut(s)	238, 2220
BcnI	CCSGG	1 cut(s)	2005
BcoDI	GTCTC	5 cut(s)	89, 530, 681, 1249, 1426
BcuI	ACTAGT	1 cut(s)	706
BfaI	CTAG	5 cut(s)	179, 707, 1121, 1883, 1898
BfmI	CTRYAG	1 cut(s)	1791
BfuI	GTATCC	1 cut(s)	902
BglII	AGATCT	1 cut(s)	757
BisI	GCNGC	8 cut(s)	15, 192, 223, 393, 606, 1772, 2009, 2079
BlsI	GCNGC	8 cut(s)	16, 193, 224, 394, 607, 1773, 2010, 2080
BmcAI	AGTACT	2 cut(s)	590, 2193
Bme1390I	CCNGG	6 cut(s)	383, 468, 558, 1148, 1302, 2005
Bme18I	GGWCC	5 cut(s)	308, 560, 1206, 1306, 2200
BmgT120I	GGNCC	6 cut(s)	308, 560, 1206, 1306, 1354, 2200
BmiI	GGNNCC	5 cut(s)	282, 555, 1030, 1307, 1870
BmrFI	CCNGG	6 cut(s)	383, 468, 558, 1148, 1302, 2005
BmrI	ACTGGG	1 cut(s)	196
BmsI	GCATC	3 cut(s)	1050, 1585, 1978
BmtI	GCTAGC	1 cut(s)	182
BmuI	ACTGGG	1 cut(s)	196
BpiI	GAAGAC	2 cut(s)	345, 397
BplI	GAGNNNNNCTC	2 cut(s)	578, 610
BpmI	CTGGAG	2 cut(s)	1220, 2216
Bpu14I	TTCGAA	1 cut(s)	1225
BpuEI	CTTGAG	4 cut(s)	142, 512, 580, 1376
BpuMI	CCSGG	1 cut(s)	2005
BsaAI	YACGTR	1 cut(s)	1994
BsaBI	GATNNNNATC	2 cut(s)	1506, 1867
BsaJI	CCNNGG	5 cut(s)	301, 356, 741, 1301, 1540
BsaWI	WCCGGW	3 cut(s)	550, 562, 1247
BsaXI	ACNNNNNCTCC	2 cut(s)	2121, 2151
Bsc4I	CCNNNNNNNGG	4 cut(s)	257, 557, 1303, 2194
Bse1I	ACTGG	5 cut(s)	191, 1132, 1440, 1946, 2199
Bse3DI	GCAATG	5 cut(s)	89, 402, 790, 1711, 2086
Bse8I	GATNNNNATC	2 cut(s)	1506, 1867
BseBI	CCWGG	5 cut(s)	383, 468, 558, 1148, 1302
BseDI	CCNNGG	5 cut(s)	301, 356, 741, 1301, 1540
BseGI	GGATG	5 cut(s)	589, 926, 1535, 1576, 2184
BseJI	GATNNNNATC	2 cut(s)	1506, 1867
BseLI	CCNNNNNNNGG	4 cut(s)	257, 557, 1303, 2194
BseMI	GCAATG	5 cut(s)	89, 402, 790, 1711, 2086
BseMII	CTCAG	3 cut(s)	663, 837, 1665
BseNI	ACTGG	5 cut(s)	191, 1132, 1440, 1946, 2199
BseRI	GAGGAG	2 cut(s)	583, 2192
BseXI	GCAGC	7 cut(s)	178, 234, 379, 592, 1783, 1995, 2065
BseYI	CCCAGC	1 cut(s)	676
Bsh1236I	CGCG	3 cut(s)	496, 2051, 2108
Bsh1285I	CGRYCG	1 cut(s)	1086
BshFI	GGCC	5 cut(s)	355, 445, 1356, 1389, 2003
BshNI	GGYRCC	1 cut(s)	1028
BsiEI	CGRYCG	1 cut(s)	1086
BsiHKAI	GWGCWC	3 cut(s)	502, 852, 2098
BsiSI	CCGG	4 cut(s)	551, 563, 1248, 2004
BslFI	GGGAC	2 cut(s)	1319, 2039
BslI	CCNNNNNNNGG	4 cut(s)	257, 557, 1303, 2194
BsmAI	GTCTC	5 cut(s)	89, 530, 681, 1249, 1426
BsmFI	GGGAC	2 cut(s)	1319, 2039
BsmI	GAATGC	1 cut(s)	1650
BsnI	GGCC	5 cut(s)	355, 445, 1356, 1389, 2003
Bsp119I	TTCGAA	1 cut(s)	1225
Bsp1286I	GDGCHC	4 cut(s)	283, 502, 852, 2098
Bsp1407I	TGTACA	1 cut(s)	873
Bsp143I	GATC	8 cut(s)	238, 757, 1083, 1160, 1421, 1507, 1868, 2220
Bsp19I	CCATGG	1 cut(s)	741
BspACI	CCGC	4 cut(s)	15, 64, 1796, 2051
BspANI	GGCC	5 cut(s)	355, 445, 1356, 1389, 2003
BspCNI	CTCAG	3 cut(s)	662, 838, 1666
BspFNI	CGCG	3 cut(s)	496, 2051, 2108
BspLI	GGNNCC	5 cut(s)	282, 555, 1030, 1307, 1870
BspOI	GCTAGC	1 cut(s)	182
BspPI	GGATC	4 cut(s)	1416, 1502, 1863, 1876
BspT104I	TTCGAA	1 cut(s)	1225
BspT107I	GGYRCC	1 cut(s)	1028
BsrBI	CCGCTC	1 cut(s)	17
BsrDI	GCAATG	5 cut(s)	89, 402, 790, 1711, 2086
BsrGI	TGTACA	1 cut(s)	873
BsrI	ACTGG	5 cut(s)	191, 1132, 1440, 1946, 2199
BssECI	CCNNGG	5 cut(s)	301, 356, 741, 1301, 1540
BssMI	GATC	8 cut(s)	238, 757, 1083, 1160, 1421, 1507, 1868, 2220
BssNAI	GTATAC	1 cut(s)	1096
BssT1I	CCWWGG	4 cut(s)	301, 356, 741, 1540
Bst1107I	GTATAC	1 cut(s)	1096
Bst2UI	CCWGG	5 cut(s)	383, 468, 558, 1148, 1302
Bst4CI	ACNGT	5 cut(s)	441, 1310, 1334, 1361, 1828
Bst6I	CTCTTC	2 cut(s)	1282, 1461
BstAUI	TGTACA	1 cut(s)	873
BstBAI	YACGTR	1 cut(s)	1994
BstBI	TTCGAA	1 cut(s)	1225
BstC8I	GCNNGC	7 cut(s)	180, 220, 488, 498, 514, 1776, 2083
BstDEI	CTNAG	4 cut(s)	649, 657, 846, 1674
BstDSI	CCRYGG	1 cut(s)	741
BstF5I	GGATG	5 cut(s)	589, 926, 1535, 1576, 2184
BstFNI	CGCG	3 cut(s)	496, 2051, 2108
BstHHI	GCGC	3 cut(s)	783, 2051, 2110
BstKTI	GATC	8 cut(s)	241, 760, 1086, 1163, 1424, 1510, 1871, 2223
BstMAI	GTCTC	5 cut(s)	89, 530, 681, 1249, 1426
BstMBI	GATC	8 cut(s)	238, 757, 1083, 1160, 1421, 1507, 1868, 2220
BstMCI	CGRYCG	1 cut(s)	1086
BstMWI	GCNNNNNNNGC	4 cut(s)	188, 200, 442, 789
BstNI	CCWGG	5 cut(s)	383, 468, 558, 1148, 1302
BstNSI	RCATGY	2 cut(s)	994, 1753
BstSCI	CCNGG	6 cut(s)	381, 466, 556, 1146, 1300, 2003
BstSFI	CTRYAG	1 cut(s)	1791
BstUI	CGCG	3 cut(s)	496, 2051, 2108
BstV1I	GCAGC	7 cut(s)	178, 234, 379, 592, 1783, 1995, 2065
BstV2I	GAAGAC	2 cut(s)	345, 397
BstX2I	RGATCY	3 cut(s)	757, 1421, 1868
BstXI	CCANNNNNNTGG	1 cut(s)	1198
BstYI	RGATCY	3 cut(s)	757, 1421, 1868
BstZ17I	GTATAC	1 cut(s)	1096
BsuI	GTATCC	1 cut(s)	902
BsuRI	GGCC	5 cut(s)	355, 445, 1356, 1389, 2003
BtgI	CCRYGG	1 cut(s)	741
BtgZI	GCGATG	1 cut(s)	919
BtsCI	GGATG	5 cut(s)	589, 926, 1535, 1576, 2184
BtsIMutI	CAGTG	3 cut(s)	234, 690, 1125
Cac8I	GCNNGC	7 cut(s)	180, 220, 488, 498, 514, 1776, 2083
CfoI	GCGC	3 cut(s)	783, 2051, 2110
Cfr13I	GGNCC	6 cut(s)	308, 560, 1206, 1306, 1354, 2200
CseI	GACGC	1 cut(s)	1656
CviAII	CATG	9 cut(s)	580, 742, 980, 991, 1164, 1718, 1750, 1768, 2224
DdeI	CTNAG	4 cut(s)	649, 657, 846, 1674
DpnI	GATC	8 cut(s)	240, 759, 1085, 1162, 1423, 1509, 1870, 2222
DpnII	GATC	8 cut(s)	238, 757, 1083, 1160, 1421, 1507, 1868, 2220
EaeI	YGGCCR	3 cut(s)	353, 443, 2001
Eam1104I	CTCTTC	2 cut(s)	1282, 1461
EarI	CTCTTC	2 cut(s)	1282, 1461
Ecl136II	GAGCTC	1 cut(s)	850
Eco130I	CCWWGG	4 cut(s)	301, 356, 741, 1540
Eco24I	GRGCYC	2 cut(s)	283, 852
Eco47I	GGWCC	5 cut(s)	308, 560, 1206, 1306, 2200
Eco53kI	GAGCTC	1 cut(s)	850
EcoICRI	GAGCTC	1 cut(s)	850
EcoRII	CCWGG	5 cut(s)	381, 466, 556, 1146, 1300
EcoT14I	CCWWGG	4 cut(s)	301, 356, 741, 1540
EcoT38I	GRGCYC	2 cut(s)	283, 852
ErhI	CCWWGG	4 cut(s)	301, 356, 741, 1540
FaeI	CATG	9 cut(s)	583, 745, 983, 994, 1167, 1721, 1753, 1771, 2227
FaqI	GGGAC	2 cut(s)	1319, 2039
FatI	CATG	9 cut(s)	579, 741, 979, 990, 1163, 1717, 1749, 1767, 2223
FauI	CCCGC	1 cut(s)	1789
FauNDI	CATATG	1 cut(s)	2074
FbaI	TGATCA	2 cut(s)	238, 2220
FblI	GTMKAC	1 cut(s)	1095
Fnu4HI	GCNGC	8 cut(s)	15, 192, 223, 393, 606, 1772, 2009, 2079
FokI	GGATG	5 cut(s)	596, 913, 1522, 1563, 2171
FriOI	GRGCYC	2 cut(s)	283, 852
Fsp4HI	GCNGC	8 cut(s)	15, 192, 223, 393, 606, 1772, 2009, 2079
FspBI	CTAG	5 cut(s)	179, 707, 1121, 1883, 1898
GlaI	GCGC	3 cut(s)	782, 2050, 2109
GluI	GCNGC	8 cut(s)	15, 192, 223, 393, 606, 1772, 2009, 2079
GsaI	CCCAGC	1 cut(s)	680
GsuI	CTGGAG	2 cut(s)	1220, 2216
HaeIII	GGCC	5 cut(s)	355, 445, 1356, 1389, 2003
HapII	CCGG	4 cut(s)	551, 563, 1248, 2004
HgaI	GACGC	1 cut(s)	1656
HhaI	GCGC	3 cut(s)	783, 2051, 2110
Hin1II	CATG	9 cut(s)	583, 745, 983, 994, 1167, 1721, 1753, 1771, 2227
Hin6I	GCGC	3 cut(s)	781, 2049, 2108
HinP1I	GCGC	3 cut(s)	781, 2049, 2108
HindIII	AAGCTT	2 cut(s)	825, 882
HpaII	CCGG	4 cut(s)	551, 563, 1248, 2004
HphI	GGTGA	3 cut(s)	1724, 1733, 1913
Hpy166II	GTNNAC	4 cut(s)	876, 1096, 1206, 1587
Hpy8I	GTNNAC	4 cut(s)	876, 1096, 1206, 1587
Hpy99I	CGWCG	2 cut(s)	906, 1650
HpyAV	CCTTC	5 cut(s)	15, 109, 632, 677, 940
HpyCH4III	ACNGT	5 cut(s)	441, 1310, 1334, 1361, 1828
HpyCH4IV	ACGT	3 cut(s)	402, 815, 1993
HpyF10VI	GCNNNNNNNGC	4 cut(s)	188, 200, 442, 789
HpyF3I	CTNAG	4 cut(s)	649, 657, 846, 1674
HpySE526I	ACGT	3 cut(s)	402, 815, 1993
Hsp92II	CATG	9 cut(s)	583, 745, 983, 994, 1167, 1721, 1753, 1771, 2227
HspAI	GCGC	3 cut(s)	781, 2049, 2108
Ksp22I	TGATCA	2 cut(s)	238, 2220
Kzo9I	GATC	8 cut(s)	238, 757, 1083, 1160, 1421, 1507, 1868, 2220
LmnI	GCTCC	4 cut(s)	22, 66, 286, 1573
Lsp1109I	GCAGC	7 cut(s)	178, 234, 379, 592, 1783, 1995, 2065
LweI	GCATC	3 cut(s)	1050, 1585, 1978
MaeI	CTAG	5 cut(s)	179, 707, 1121, 1883, 1898
MaeII	ACGT	3 cut(s)	402, 815, 1993
MaeIII	GTNAC	6 cut(s)	664, 1123, 1361, 1633, 2137, 2151
MalI	GATC	8 cut(s)	240, 759, 1085, 1162, 1423, 1509, 1870, 2222
MbiI	CCGCTC	1 cut(s)	17
MboI	GATC	8 cut(s)	238, 757, 1083, 1160, 1421, 1507, 1868, 2220
MfeI	CAATTG	3 cut(s)	327, 837, 2111
MflI	RGATCY	3 cut(s)	757, 1421, 1868
MhlI	GDGCHC	4 cut(s)	283, 502, 852, 2098
MlsI	TGGCCA	2 cut(s)	355, 445
MluI	ACGCGT	1 cut(s)	494
MluNI	TGGCCA	2 cut(s)	355, 445
MlyI	GAGTC	2 cut(s)	239, 2021
MmeI	TCCRAC	2 cut(s)	982, 1321
Mox20I	TGGCCA	2 cut(s)	355, 445
MscI	TGGCCA	2 cut(s)	355, 445
MslI	CAYNNNNRTG	2 cut(s)	303, 1192
Msp20I	TGGCCA	2 cut(s)	355, 445
MspA1I	CMGCKG	1 cut(s)	676
MspI	CCGG	4 cut(s)	551, 563, 1248, 2004
MspR9I	CCNGG	6 cut(s)	383, 468, 558, 1148, 1302, 2005
MunI	CAATTG	3 cut(s)	327, 837, 2111
Mva1269I	GAATGC	1 cut(s)	1650
MvaI	CCWGG	5 cut(s)	383, 468, 558, 1148, 1302
MvnI	CGCG	3 cut(s)	496, 2051, 2108
MwoI	GCNNNNNNNGC	4 cut(s)	188, 200, 442, 789
NciI	CCSGG	1 cut(s)	2005
NcoI	CCATGG	1 cut(s)	741
NdeI	CATATG	1 cut(s)	2074
NdeII	GATC	8 cut(s)	238, 757, 1083, 1160, 1421, 1507, 1868, 2220
NheI	GCTAGC	1 cut(s)	178
NlaIII	CATG	9 cut(s)	583, 745, 983, 994, 1167, 1721, 1753, 1771, 2227
NlaIV	GGNNCC	5 cut(s)	282, 555, 1030, 1307, 1870
NmuCI	GTSAC	3 cut(s)	664, 1123, 2137
NspI	RCATGY	2 cut(s)	994, 1753
NspV	TTCGAA	1 cut(s)	1225
OliI	CACNNNNGTG	2 cut(s)	303, 1192
PciI	ACATGT	1 cut(s)	990
PctI	GAATGC	1 cut(s)	1650
PfeI	GAWTC	8 cut(s)	58, 653, 1043, 1238, 1338, 1347, 1380, 1800
PflFI	GACNNNGTC	1 cut(s)	1738
PflMI	CCANNNNNTGG	2 cut(s)	257, 2194
PkrI	GCNGC	8 cut(s)	16, 193, 224, 394, 607, 1773, 2010, 2080
Ple19I	CGATCG	1 cut(s)	1086
PleI	GAGTC	2 cut(s)	239, 2021
PpsI	GAGTC	2 cut(s)	239, 2021
Ppu21I	YACGTR	1 cut(s)	1994
PscI	ACATGT	1 cut(s)	990
PshBI	ATTAAT	1 cut(s)	2042
Psp124BI	GAGCTC	1 cut(s)	852
Psp6I	CCWGG	5 cut(s)	381, 466, 556, 1146, 1300
PspFI	CCCAGC	1 cut(s)	676
PspGI	CCWGG	5 cut(s)	381, 466, 556, 1146, 1300
PspN4I	GGNNCC	5 cut(s)	282, 555, 1030, 1307, 1870
PspPI	GGNCC	6 cut(s)	308, 560, 1206, 1306, 1354, 2200
PsuI	RGATCY	3 cut(s)	757, 1421, 1868
PsyI	GACNNNGTC	1 cut(s)	1738
PvuI	CGATCG	1 cut(s)	1086
PvuII	CAGCTG	1 cut(s)	676
RseI	CAYNNNNRTG	2 cut(s)	303, 1192
SacI	GAGCTC	1 cut(s)	852
SatI	GCNGC	8 cut(s)	15, 192, 223, 393, 606, 1772, 2009, 2079
Sau3AI	GATC	8 cut(s)	238, 757, 1083, 1160, 1421, 1507, 1868, 2220
Sau96I	GGNCC	6 cut(s)	308, 560, 1206, 1306, 1354, 2200
ScaI	AGTACT	2 cut(s)	590, 2193
SchI	GAGTC	2 cut(s)	239, 2021
ScrFI	CCNGG	6 cut(s)	383, 468, 558, 1148, 1302, 2005
SduI	GDGCHC	4 cut(s)	283, 502, 852, 2098
SfaNI	GCATC	3 cut(s)	1050, 1585, 1978
SfcI	CTRYAG	1 cut(s)	1791
SfuI	TTCGAA	1 cut(s)	1225
SinI	GGWCC	5 cut(s)	308, 560, 1206, 1306, 2200
SmiMI	CAYNNNNRTG	2 cut(s)	303, 1192
SmlI	CTYRAG	4 cut(s)	121, 527, 595, 1391
SmoI	CTYRAG	4 cut(s)	121, 527, 595, 1391
SpeI	ACTAGT	1 cut(s)	706
SsiI	CCGC	4 cut(s)	15, 64, 1796, 2051
SspI	AATATT	2 cut(s)	378, 700
SspMI	CTAG	5 cut(s)	179, 707, 1121, 1883, 1898
SstI	GAGCTC	1 cut(s)	852
StyD4I	CCNGG	6 cut(s)	381, 466, 556, 1146, 1300, 2003
StyI	CCWWGG	4 cut(s)	301, 356, 741, 1540
TaaI	ACNGT	5 cut(s)	441, 1310, 1334, 1361, 1828
TaiI	ACGT	3 cut(s)	405, 818, 1996
TaqI	TCGA	8 cut(s)	137, 768, 901, 1058, 1225, 1402, 1950, 2030
TaqII	GACCGA	1 cut(s)	1659
TatI	WGTACW	5 cut(s)	576, 588, 873, 1584, 2191
TauI	GCSGC	1 cut(s)	17
TfiI	GAWTC	8 cut(s)	58, 653, 1043, 1238, 1338, 1347, 1380, 1800
TscAI	CASTG	3 cut(s)	241, 697, 1132
TseFI	GTSAC	3 cut(s)	664, 1123, 2137
TseI	GCWGC	7 cut(s)	191, 222, 392, 605, 1771, 2008, 2078
Tsp45I	GTSAC	3 cut(s)	664, 1123, 2137
TspGWI	ACGGA	1 cut(s)	1704
TspRI	CASTG	3 cut(s)	241, 697, 1132
Tth111I	GACNNNGTC	1 cut(s)	1738
Van91I	CCANNNNNTGG	2 cut(s)	257, 2194
VpaK11BI	GGWCC	5 cut(s)	308, 560, 1206, 1306, 2200
VspI	ATTAAT	1 cut(s)	2042
XapI	RAATTY	6 cut(s)	735, 1215, 1453, 1724, 1844, 2018
XceI	RCATGY	2 cut(s)	994, 1753
XcmI	CCANNNNNNNNNTGG	2 cut(s)	886, 1432
XmiI	GTMKAC	1 cut(s)	1095
XspI	CTAG	5 cut(s)	179, 707, 1121, 1883, 1898
ZrmI	AGTACT	2 cut(s)	590, 2193

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.